Rh7AG091300

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
6988580 .. 6993079
4500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG091300.1

Sequence Viewer

Length: 1134 bp
ATGTTTGGTTCTACGAGCCGTGGACCGTCTCTCGCTGGTGCGGGTAGCTTTGGTGTATCAACTGTTCAGACAAGTACTTTGAATCCTAATCCTGCACCATCGTTTTCTCAAACATCTTCAAGTCCTTTTAATACCTCAACCTCATCTGGTTTATTTGCCCAAAAGCCCTCATCCTTTCCTTCTACTGGTTTTGGTGTTACTTCATCTTCACCATTTAGTTCAACTTCACCGTTTAGTTCTTCATCAACTCAAACCAATGTTTTTACACCTGCATCATCTGCGTCACCATTTGGCCAAACGTTGTCTCCAGCTATTTTTAGTTCACCGTCTTCCTTTTCATTCTCTACCCCGGCTACATCATCCACTCCCTCATTTAATTTTCCCACTCCATCAAACCCACAGACACAGTTTGGTCAAACAGGCACTACCTCCTGTGGTTCAAACTTGTTCAATAATACTTCCAGTTTGCAGAGCAGTTCATTGGGTACTACAAGCAACCACCTGGGTATTACTCAACCAGCTGTAAGTCTCTCTCTCTCTCTCTACCATTTGTTGGTTGTGTCGAAGATGCTTAGATTTTCTCCTTATCAAAAGCCTGATTCTGGAACTACTACTTCTGTCACTTCTGGCACTAGTATCACCGTAAACCCAACTTCTGGTACTGCTGTCACTATAACCCCCAGTCCTGGCAGTACTGTCACCATAACCATCTCAATTTCTGGTAGTACTACTATCAATATATCCCCCACTTCTGAAACTACCTCAAGTAATACACCTTCGCCAACTGGAGAAACTTCATCTCCATTTGTAAGTATCGAGAACTTAATCTTCTGGAGGATTGTAGTATGCTATCTCCTCTGCTGGCTTTGTGGCAACCTGAGCTTTAGGCTTCCCCATCCTGCCCCAAAGTCTCCGAGTTTATCTCAACCCTTCAACAGTTTGGATAAAAAACCACCAGATGATGGTGCTGACTTTGTATATTGGCTACAGCTGTACAACCAATACATTCTACAAGCTCGTCTCTGGTTCCAACTCCTGTTCCTGCACAGCCAATTGAAGATGGTGTCAGAGAATCCATTAAAAACCAGAACGATGTCACACTGGGAATCACAAAGCAATTGCTTCTGGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

377

Amino Acids

39.94

Weight (kDa)

8.85

Isoelectric Point (pI)

58.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 277
Acc36I ACCTGC 1 cut(s) 277
AccB7I CCANNNNNTGG 3 cut(s) 553, 656, 962
AciI CCGC 1 cut(s) 41
AclI AACGTT 1 cut(s) 299
AcoI YGGCCR 1 cut(s) 292
AfaI GTAC 6 cut(s) 76, 487, 661, 694, 727, 995
AfiI CCNNNNNNNGG 6 cut(s) 185, 553, 602, 656, 686, 962
AgsI TTSAA 7 cut(s) 82, 120, 222, 441, 451, 934, 1057
AhlI ACTAGT 1 cut(s) 632
AjnI CCWGG 2 cut(s) 501, 685
AluBI AGCT 6 cut(s) 48, 311, 521, 882, 991, 1016
AluI AGCT 6 cut(s) 48, 311, 521, 882, 991, 1016
Alw26I GTCTC 5 cut(s) 33, 309, 533, 915, 1025
AoxI GGCC 1 cut(s) 292
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
AspS9I GGNCC 1 cut(s) 23
AsuC2I CCSGG 1 cut(s) 350
AsuHPI GGTGA 6 cut(s) 201, 219, 276, 315, 631, 691
AvaII GGWCC 1 cut(s) 23
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BalI TGGCCA 1 cut(s) 294
BarI GAAGNNNNNNTAC 2 cut(s) 760, 792
BbsI GAAGAC 1 cut(s) 321
BccI CCATC 6 cut(s) 106, 397, 716, 903, 956, 1054
BceAI ACGGC 1 cut(s) 3
BciT130I CCWGG 2 cut(s) 503, 687
BcnI CCSGG 1 cut(s) 350
BcoDI GTCTC 5 cut(s) 33, 309, 533, 915, 1025
BcuI ACTAGT 1 cut(s) 632
BfaI CTAG 1 cut(s) 633
BfmI CTRYAG 1 cut(s) 986
BfuAI ACCTGC 1 cut(s) 277
BmcAI AGTACT 3 cut(s) 76, 694, 727
Bme1390I CCNGG 3 cut(s) 350, 503, 687
Bme18I GGWCC 1 cut(s) 23
BmgT120I GGNCC 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 1028
BmrFI CCNGG 3 cut(s) 350, 503, 687
BmrI ACTGGG 2 cut(s) 675, 1111
BmsI GCATC 2 cut(s) 281, 558
BmuI ACTGGG 2 cut(s) 675, 1111
BpiI GAAGAC 1 cut(s) 321
BplI GAGNNNNNCTC 2 cut(s) 907, 939
BpmI CTGGAG 3 cut(s) 291, 807, 853
Bpu10I CCTNAGC 1 cut(s) 878
BpuEI CTTGAG 1 cut(s) 748
BpuMI CCSGG 1 cut(s) 350
BsaJI CCNNGG 3 cut(s) 19, 348, 502
BsaXI ACNNNNNCTCC 4 cut(s) 289, 319, 784, 814
Bsc4I CCNNNNNNNGG 6 cut(s) 185, 553, 602, 656, 686, 962
Bse1I ACTGG 5 cut(s) 190, 462, 681, 790, 1106
BseBI CCWGG 2 cut(s) 503, 687
BseDI CCNNGG 3 cut(s) 19, 348, 502
BseGI GGATG 4 cut(s) 170, 359, 895, 1134
BseLI CCNNNNNNNGG 6 cut(s) 185, 553, 602, 656, 686, 962
BseMII CTCAG 1 cut(s) 869
BseNI ACTGG 5 cut(s) 190, 462, 681, 790, 1106
BseRI GAGGAG 1 cut(s) 845
BsgI GTGCAG 2 cut(s) 78, 1028
BshFI GGCC 1 cut(s) 294
BsiSI CCGG 1 cut(s) 350
BslI CCNNNNNNNGG 6 cut(s) 185, 553, 602, 656, 686, 962
BsmAI GTCTC 5 cut(s) 33, 309, 533, 915, 1025
BsmBI CGTCTC 2 cut(s) 33, 1025
BsnI GGCC 1 cut(s) 294
Bsp1407I TGTACA 1 cut(s) 993
BspACI CCGC 1 cut(s) 41
BspANI GGCC 1 cut(s) 294
BspCNI CTCAG 1 cut(s) 870
BspLI GGNNCC 1 cut(s) 1028
BspMI ACCTGC 1 cut(s) 277
BsrGI TGTACA 1 cut(s) 993
BsrI ACTGG 5 cut(s) 190, 462, 681, 790, 1106
BssECI CCNNGG 3 cut(s) 19, 348, 502
Bst2UI CCWGG 2 cut(s) 503, 687
Bst4CI ACNGT 8 cut(s) 27, 64, 231, 327, 408, 643, 697, 938
BstAPI GCANNNNNTGC 1 cut(s) 278
BstAUI TGTACA 1 cut(s) 993
BstC8I GCNNGC 1 cut(s) 863
BstDEI CTNAG 2 cut(s) 572, 878
BstDSI CCRYGG 1 cut(s) 19
BstF5I GGATG 4 cut(s) 170, 359, 895, 1134
BstMAI GTCTC 5 cut(s) 33, 309, 533, 915, 1025
BstMWI GCNNNNNNNGC 2 cut(s) 278, 879
BstNI CCWGG 2 cut(s) 503, 687
BstSCI CCNGG 3 cut(s) 348, 501, 685
BstSFI CTRYAG 1 cut(s) 986
BstV2I GAAGAC 1 cut(s) 321
BsuRI GGCC 1 cut(s) 294
BtgI CCRYGG 1 cut(s) 19
BtsCI GGATG 4 cut(s) 170, 359, 895, 1134
BtsIMutI CAGTG 1 cut(s) 1099
BveI ACCTGC 1 cut(s) 277
Cac8I GCNNGC 1 cut(s) 863
Cfr13I GGNCC 1 cut(s) 23
CseI GACGC 1 cut(s) 270
Csp6I GTAC 6 cut(s) 75, 486, 660, 693, 726, 994
CviQI GTAC 6 cut(s) 75, 486, 660, 693, 726, 994
DdeI CTNAG 2 cut(s) 572, 878
EaeI YGGCCR 1 cut(s) 292
Eco47I GGWCC 1 cut(s) 23
EcoRII CCWGG 2 cut(s) 501, 685
Esp3I CGTCTC 2 cut(s) 33, 1025
FaiI YATR 5 cut(s) 674, 704, 740, 847, 979
FauI CCCGC 1 cut(s) 34
FokI GGATG 3 cut(s) 157, 346, 882
FspBI CTAG 1 cut(s) 633
GsuI CTGGAG 3 cut(s) 291, 807, 853
HaeIII GGCC 1 cut(s) 294
HapII CCGG 1 cut(s) 350
HgaI GACGC 1 cut(s) 270
HinfI GANTC 4 cut(s) 82, 599, 1072, 1106
HpaII CCGG 1 cut(s) 350
HphI GGTGA 6 cut(s) 201, 219, 276, 315, 631, 691
Hpy166II GTNNAC 3 cut(s) 23, 323, 646
Hpy188I TCNGA 4 cut(s) 69, 754, 915, 1069
Hpy188III TCNNGA 4 cut(s) 603, 817, 832, 1126
Hpy8I GTNNAC 3 cut(s) 23, 323, 646
HpyAV CCTTC 3 cut(s) 189, 786, 940
HpyCH4III ACNGT 8 cut(s) 27, 64, 231, 327, 408, 643, 697, 938
HpyCH4IV ACGT 1 cut(s) 299
HpyCH4V TGCA 4 cut(s) 95, 272, 469, 1045
HpyF10VI GCNNNNNNNGC 2 cut(s) 278, 879
HpyF3I CTNAG 2 cut(s) 572, 878
HpySE526I ACGT 1 cut(s) 299
LweI GCATC 2 cut(s) 281, 558
MaeI CTAG 1 cut(s) 633
MaeII ACGT 1 cut(s) 299
MaeIII GTNAC 6 cut(s) 196, 282, 619, 667, 697, 1095
MboII GAAGA 7 cut(s) 108, 198, 231, 321, 577, 820, 1069
MfeI CAATTG 2 cut(s) 1052, 1117
MlsI TGGCCA 1 cut(s) 294
MluCI AATT 4 cut(s) 376, 714, 1052, 1117
MluNI TGGCCA 1 cut(s) 294
MmeI TCCRAC 1 cut(s) 1054
MnlI CCTC 8 cut(s) 145, 151, 178, 379, 439, 772, 828, 866
Mox20I TGGCCA 1 cut(s) 294
MscI TGGCCA 1 cut(s) 294
MseI TTAA 4 cut(s) 129, 375, 824, 1079
Msp20I TGGCCA 1 cut(s) 294
MspA1I CMGCKG 2 cut(s) 521, 991
MspI CCGG 1 cut(s) 350
MspR9I CCNGG 3 cut(s) 350, 503, 687
MunI CAATTG 2 cut(s) 1052, 1117
MvaI CCWGG 2 cut(s) 503, 687
MwoI GCNNNNNNNGC 2 cut(s) 278, 879
NciI CCSGG 1 cut(s) 350
NlaIV GGNNCC 1 cut(s) 1028
NmuCI GTSAC 5 cut(s) 282, 619, 667, 697, 1095
PaqCI CACCTGC 1 cut(s) 277
PfeI GAWTC 4 cut(s) 82, 599, 1072, 1106
PflMI CCANNNNNTGG 3 cut(s) 553, 656, 962
Psp1406I AACGTT 1 cut(s) 299
Psp6I CCWGG 2 cut(s) 501, 685
PspGI CCWGG 2 cut(s) 501, 685
PspN4I GGNNCC 1 cut(s) 1028
PspPI GGNCC 1 cut(s) 23
PsrI GAACNNNNNNTAC 2 cut(s) 48, 80
PvuII CAGCTG 2 cut(s) 521, 991
RsaI GTAC 6 cut(s) 76, 487, 661, 694, 727, 995
RsaNI GTAC 6 cut(s) 75, 486, 660, 693, 726, 994
SaqAI TTAA 4 cut(s) 129, 375, 824, 1079
Sau96I GGNCC 1 cut(s) 23
ScaI AGTACT 3 cut(s) 76, 694, 727
ScrFI CCNGG 3 cut(s) 350, 503, 687
SfaNI GCATC 2 cut(s) 281, 558
SfcI CTRYAG 1 cut(s) 986
SinI GGWCC 1 cut(s) 23
SmlI CTYRAG 1 cut(s) 763
SmoI CTYRAG 1 cut(s) 763
SpeI ACTAGT 1 cut(s) 632
Sse9I AATT 4 cut(s) 376, 714, 1052, 1117
SsiI CCGC 1 cut(s) 41
SspMI CTAG 1 cut(s) 633
StyD4I CCNGG 3 cut(s) 348, 501, 685
TaaI ACNGT 8 cut(s) 27, 64, 231, 327, 408, 643, 697, 938
TaiI ACGT 1 cut(s) 302
TaqI TCGA 2 cut(s) 563, 816
TasI AATT 4 cut(s) 376, 714, 1052, 1117
TatI WGTACW 4 cut(s) 74, 692, 725, 993
TfiI GAWTC 4 cut(s) 82, 599, 1072, 1106
Tru1I TTAA 4 cut(s) 129, 375, 824, 1079
Tru9I TTAA 4 cut(s) 129, 375, 824, 1079
TscAI CASTG 1 cut(s) 1106
TseFI GTSAC 5 cut(s) 282, 619, 667, 697, 1095
Tsp45I GTSAC 5 cut(s) 282, 619, 667, 697, 1095
TspDTI ATGAA 5 cut(s) 192, 231, 327, 468, 786
TspRI CASTG 1 cut(s) 1106
Van91I CCANNNNNTGG 3 cut(s) 553, 656, 962
VpaK11BI GGWCC 1 cut(s) 23
XspI CTAG 1 cut(s) 633
ZrmI AGTACT 3 cut(s) 76, 694, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.