pycom12g05670

Belongs to the serpin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000163
Physical Location & Seq
Reverse (-)
5579761 .. 5581227
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g05670.1

Sequence Viewer

Length: 1272 bp
ATGCCGTCGTTTGAACAGCCAACGCCCTTCCCTGACTTCGAATGGATGACTGAGATAGATCCTGTTGCTCTTCTTCCCTTCTGTCTCCCAGATCGCGATATTCAATCGACCAAACAATGCATCAGCAACCTGACCAACGTCTCACTCAAAATTACCAAGCGTCTGCTCACGACTGAAGGCAAAATGAAGAACATGGTGTATTCGCCTCTGTCCATCCAGGTCGTATTGTGGCTATTAACAGCAGGGTCAAAGGGTCCCACAAAGGAGGAGTTGCTCTCTTTCCTCAACTTTAAGTCCGTCGACGAATTCAACTCCCTGGCCGCCCATCTTGTTCCTCTGGTATTCGCAGATGGATCCGCTAGAGGTGGTCCCTGCCTATCCTTTGCCAATGGCCTCTGGATTAAGGAGTCTCTCCCCATCAAACCTTCTTTCAAAGAGGTTGTGGACACTGTTTACAAGGCGGATATAAAACATGTTAGTTTCGAAGACCCGGAAGAAGTGAGACGTGAAGTGAATTTATGGGCCAAAATGGCGACGAAAGGGCTTATCACTGAGTCTCTTCCTCCTATGTCAGTTGAACAGGCCCCCATGCTTATATTTGCAAATGCCTTATACTTCAAAGGCCTTTGGAGCGATAAGTTCAATGCATCGAATACAAAAGTGGACTACTTCGCCCTCCTCGATGGTACCTATGTTATGGCACAGTTCATGAGAAGCTACAACGACCAGTTTGTAGAAGCCTTTGACTGCTTCAAAGTCGCAAAGCTTCCGTACAAACAAGGCGGAGACAAGGAGAGGCAGTTTTCTATGTACTTGTTACTTCCATATGCAACAAATGGGCTGGCAGCTTTAGTTGAGAGAGTTTGTTCCGAGCCCGGTTTCTTAGATCACCATCGCCCCGAAAGACAAGTCCCAGTTAGTGCCTTTAGAATCCCAAAGTTTAAGATTACCTCCGGCTTTAAGGCTTCTGATGTTCTCAGGGATTTAGGACTGGTGCTACCATTCTCTGCTGCAGGTGATTTGACGGAGATGGTGGAGGCACCTATACCTCCGGGGAAAATATTTCATAAATCATTCATTGAAGTTGAAGAAGAAGGCACAAAAGCTGCAGCTGTTTCTGCTTATATCGGTTGGTCATCATCTTGTGGACCGGATGTACCGATTGAAACGATAGACTTCGTGGCTGATCACCCATTTTTGCTTTTTATCGGAGAAGAAAGGGCTGGAACTGTTATGTTTATTGGTCACGTACTCAATCCGCTTGTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05146 ko05164 map03013 map05146 map05164
Pfam Domains
Protein Families
Serpin

Protein Analysis

424

Amino Acids

47.16

Weight (kDa)

5.29

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 43 - 420 6.8e-81 Serpin (serine protease inhibitor)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64020
fragaria_vesca FvH4_1g24600 FvH4_1g24640 FvH4_2g15000 FvH4_3g03700 FvH4_3g03710 FvH4_3g09790 FvH4_3g09790 FvH4_3g09810 FvH4_3g09811 FvH4_3g23720 FvH4_3g32870 FvH4_3g32890 FvH4_3g37550 FvH4_3g37560 FvH4_5g01890 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g10280 FvH4_5g21100 FvH4_5g21110 FvH4_5g21330 FvH4_5g21331 FvH4_5g21520 FvH4_5g21540 FvH4_5g21970 FvH4_6g01280
malus_domestica MD00G1084800.v1.1 MD00G1141300.v1.1 MD02G1102800.v1.1 MD02G1282200.v1.1 MD02G1282300.v1.1 MD03G1207900.v1.1 MD03G1230000.v1.1 MD04G1136400.v1.1 MD04G1136500.v1.1 MD04G1189000.v1.1 MD05G1248700.v1.1 MD05G1248800.v1.1 MD06G1030400.v1.1 MD10G1229200.v1.1 MD10G1229300.v1.1 MD15G1291400.v1.1 MD15G1431300.v1.1
prunus_persica Prupe.5G041800_v2.0.a1 Prupe.5G041900_v2.0.a1 Prupe.5G042000_v2.0.a1 Prupe.5G042100_v2.0.a1 Prupe.5G042200_v2.0.a1
pyrus_communis pycom02g14630 pycom02g24090 pycom04g12410 pycom04g16760 pycom05g22550 pycom10g19280 pycom12g05670 pycom15g25490 pycom15g38110
rosa_chinensis RchiOBHm_Chr2g0122001 RchiOBHm_Chr2g0163171 RchiOBHm_Chr2g0163181 RchiOBHm_Chr3g0455201 RchiOBHm_Chr5g0005751 RchiOBHm_Chr5g0015501 RchiOBHm_Chr5g0015511 RchiOBHm_Chr5g0015521 RchiOBHm_Chr5g0015531 RchiOBHm_Chr5g0060021 RchiOBHm_Chr7g0187971 RchiOBHm_Chr7g0207951 RchiOBHm_Chr7g0208671 RchiOBHm_Chr7g0208691 RchiOBHm_Chr7g0208941 RchiOBHm_Chr7g0208951 RchiOBHm_Chr7g0208961
rosa_laevigata RLG00000003132 RLG00000003177 RLG00000003178 RLG00000003179 RLG00000003180 RLG00000003201 RLG00000003202 RLG00000003270 RLG00000004739 RLG00000004741 RLG00000004744 RLG00000021379 RLG00000025378 RLG00000031323 RLG00000031324 RLG00000032205 RLG00000032206 RLG00000035339
rosa_multiflora Rmu_co8189380.1_g000001 Rmu_co8284591.1_g000001 Rmu_co8360283.1_g000002 Rmu_co8379053.1_g000001 Rmu_sc0000493.1_g000007 Rmu_sc0000532.1_g000030 Rmu_sc0000532.1_g000031 Rmu_sc0000570.1_g000033 Rmu_sc0000905.1_g000012 Rmu_sc0001730.1_g000002 Rmu_sc0002045.1_g000039 Rmu_sc0003064.1_g000001 Rmu_sc0003064.1_g000002 Rmu_sc0003064.1_g000006 Rmu_sc0003880.1_g000012 Rmu_sc0004103.1_g000003 Rmu_sc0005082.1_g000007 Rmu_sc0011272.1_g000002 Rmu_sc0015523.1_g000021 Rmu_sc0015523.1_g000022 Rmu_sc0019960.1_g000007 Rmu_sc0029514.1_g000001 Rmu_ssc0000422.1_g000010
rosa_roxburghii Rroxscaffold_1G00013660 Rroxscaffold_1G00060980 Rroxscaffold_1G00060990 Rroxscaffold_1G00061000 Rroxscaffold_1G00061010 Rroxscaffold_2G00087490 Rroxscaffold_2G00122080 Rroxscaffold_2G00123490 Rroxscaffold_3G00249930 Rroxscaffold_3G00249940 Rroxscaffold_3G00249950 Rroxscaffold_3G00249980 Rroxscaffold_3G00250310 Rroxscaffold_3G00250320 Rroxscaffold_3G00266850 Rroxscaffold_3G00266870 Rroxscaffold_3G00266910 Rroxscaffold_6G00424480
rosa_rugosa Rorug02G0228900 Rorug02G0236000 Rorug02G0501100 Rorug03G0004700 Rorug03G0004700 Rorug03G0004800 Rorug04G0417800 Rorug05G0027800 Rorug05G0027900 Rorug05G0028000 Rorug05G0327700 Rorug05G0384800 Rorug06G0486000 Rorug06G0486100 Rorug06G0486200 Rorug06G0486200 Rorug06G0486300 Rorug06G0486400 Rorug06G0486500 Rorug07G0100400 Rorug07G0105400 Rorug07G0105400 Rorug07G0107300 Rorug07G0107400 Rorug07G0107500 Rorug07G0113300
rosa_samantha Rh7AG091300 Rh7BG092800 Rh7CG091600 Rh7CG257500 Rh7DG093500
rosa_wichuraiana Rw0G001260 Rw0G017680 Rw2G023470 Rw3G005130 Rw5G004560 Rw5G010480 Rw7G020400 Rw7G020410 Rw7G020540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1004
Acc36I ACCTGC 1 cut(s) 1004
Acc65I GGTACC 1 cut(s) 686
AccB1I GGYRCC 2 cut(s) 686, 1039
AccI GTMKAC 1 cut(s) 300
AccII CGCG 1 cut(s) 96
AciI CCGC 5 cut(s) 321, 357, 461, 783, 1259
AclWI GGATC 3 cut(s) 53, 348, 361
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 2 cut(s) 305, 514
AcuI CTGAAG 1 cut(s) 195
AfaI GTAC 5 cut(s) 688, 773, 812, 1158, 1251
AflIII ACRYGT 1 cut(s) 472
AjiI CACGTC 1 cut(s) 506
AjnI CCWGG 2 cut(s) 216, 315
AluBI AGCT 5 cut(s) 717, 766, 848, 1106, 1112
AluI AGCT 5 cut(s) 717, 766, 848, 1106, 1112
Alw26I GTCTC 6 cut(s) 89, 145, 414, 496, 561, 780
AlwI GGATC 3 cut(s) 53, 348, 361
AoxI GGCC 5 cut(s) 318, 391, 522, 582, 622
ApeKI GCWGC 4 cut(s) 845, 1010, 1106, 1109
ApoI RAATTY 2 cut(s) 305, 514
ArsI GACNNNNNNTTYG 2 cut(s) 894, 926
Asp718I GGTACC 1 cut(s) 686
AspS9I GGNCC 5 cut(s) 254, 368, 522, 583, 1148
AsuC2I CCSGG 3 cut(s) 491, 876, 1053
AsuHPI GGTGA 3 cut(s) 881, 1028, 1181
AsuII TTCGAA 2 cut(s) 39, 483
AvaII GGWCC 3 cut(s) 254, 368, 1148
BaeI ACNNNNGTAYC 2 cut(s) 678, 711
BamHI GGATCC 1 cut(s) 353
BanI GGYRCC 2 cut(s) 686, 1039
BanII GRGCYC 1 cut(s) 876
BbsI GAAGAC 1 cut(s) 492
BbvI GCAGC 4 cut(s) 857, 997, 1093, 1121
BccI CCATC 7 cut(s) 221, 333, 344, 425, 677, 900, 1024
BciT130I CCWGG 2 cut(s) 218, 317
BclI TGATCA 1 cut(s) 1186
BcnI CCSGG 3 cut(s) 491, 876, 1053
BcoDI GTCTC 6 cut(s) 89, 145, 414, 496, 561, 780
BfaI CTAG 1 cut(s) 360
BfmI CTRYAG 2 cut(s) 1011, 1107
BfuAI ACCTGC 1 cut(s) 1004
BglI GCCNNNNNGGC 1 cut(s) 530
BisI GCNGC 5 cut(s) 321, 846, 1011, 1107, 1110
BlsI GCNGC 5 cut(s) 322, 847, 1012, 1108, 1111
Bme1390I CCNGG 5 cut(s) 218, 317, 491, 876, 1053
Bme18I GGWCC 3 cut(s) 254, 368, 1148
BmgBI CACGTC 1 cut(s) 506
BmgT120I GGNCC 5 cut(s) 254, 368, 522, 583, 1148
BmiI GGNNCC 7 cut(s) 255, 256, 355, 370, 585, 688, 1041
BmrFI CCNGG 5 cut(s) 218, 317, 491, 876, 1053
BmrI ACTGGG 1 cut(s) 908
BmsI GCATC 2 cut(s) 129, 656
BmuI ACTGGG 1 cut(s) 908
BoxI GACNNNNGTC 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 492
BplI GAGNNNNNCTC 2 cut(s) 260, 292
Bpu14I TTCGAA 2 cut(s) 39, 483
BpuMI CCSGG 3 cut(s) 491, 876, 1053
BsaAI YACGTR 1 cut(s) 1249
BsaBI GATNNNNATC 1 cut(s) 891
BsaJI CCNNGG 2 cut(s) 315, 1052
BsaWI WCCGGW 1 cut(s) 1150
BsaXI ACNNNNNCTCC 2 cut(s) 785, 815
Bse1I ACTGG 3 cut(s) 727, 914, 996
Bse8I GATNNNNATC 1 cut(s) 891
BseBI CCWGG 2 cut(s) 218, 317
BseDI CCNNGG 2 cut(s) 315, 1052
BseGI GGATG 3 cut(s) 51, 213, 1159
BseJI GATNNNNATC 1 cut(s) 891
BseMII CTCAG 3 cut(s) 42, 543, 991
BseNI ACTGG 3 cut(s) 727, 914, 996
BseRI GAGGAG 2 cut(s) 281, 668
BseXI GCAGC 4 cut(s) 857, 997, 1093, 1121
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 5 cut(s) 320, 393, 524, 584, 624
BshNI GGYRCC 2 cut(s) 686, 1039
BsiSI CCGG 5 cut(s) 491, 876, 954, 1052, 1151
BslFI GGGAC 3 cut(s) 240, 354, 896
BsmAI GTCTC 6 cut(s) 89, 145, 414, 496, 561, 780
BsmBI CGTCTC 2 cut(s) 145, 496
BsmFI GGGAC 3 cut(s) 240, 354, 896
BsnI GGCC 5 cut(s) 320, 393, 524, 584, 624
Bsp119I TTCGAA 2 cut(s) 39, 483
Bsp1286I GDGCHC 1 cut(s) 876
Bsp143I GATC 5 cut(s) 58, 91, 353, 886, 1186
Bsp68I TCGCGA 1 cut(s) 96
BspACI CCGC 5 cut(s) 321, 357, 461, 783, 1259
BspANI GGCC 5 cut(s) 320, 393, 524, 584, 624
BspCNI CTCAG 3 cut(s) 43, 544, 990
BspFNI CGCG 1 cut(s) 96
BspHI TCATGA 1 cut(s) 708
BspLI GGNNCC 7 cut(s) 255, 256, 355, 370, 585, 688, 1041
BspMAI CTGCAG 2 cut(s) 1015, 1111
BspMI ACCTGC 1 cut(s) 1004
BspPI GGATC 3 cut(s) 53, 348, 361
BspQI GCTCTTC 1 cut(s) 75
BspT104I TTCGAA 2 cut(s) 39, 483
BspT107I GGYRCC 2 cut(s) 686, 1039
BsrI ACTGG 3 cut(s) 727, 914, 996
BssECI CCNNGG 2 cut(s) 315, 1052
BssMI GATC 5 cut(s) 58, 91, 353, 886, 1186
Bst2UI CCWGG 2 cut(s) 218, 317
Bst4CI ACNGT 3 cut(s) 451, 705, 1231
Bst6I CTCTTC 2 cut(s) 75, 564
BstBAI YACGTR 1 cut(s) 1249
BstBI TTCGAA 2 cut(s) 39, 483
BstC8I GCNNGC 1 cut(s) 843
BstDEI CTNAG 4 cut(s) 51, 552, 883, 977
BstF5I GGATG 3 cut(s) 51, 213, 1159
BstFNI CGCG 1 cut(s) 96
BstKTI GATC 5 cut(s) 61, 94, 356, 889, 1189
BstMAI GTCTC 6 cut(s) 89, 145, 414, 496, 561, 780
BstMBI GATC 5 cut(s) 58, 91, 353, 886, 1186
BstMWI GCNNNNNNNGC 3 cut(s) 530, 630, 1118
BstNI CCWGG 2 cut(s) 218, 317
BstNSI RCATGY 1 cut(s) 476
BstPAI GACNNNNGTC 1 cut(s) 137
BstSCI CCNGG 5 cut(s) 216, 315, 489, 874, 1051
BstSFI CTRYAG 2 cut(s) 1011, 1107
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 4 cut(s) 857, 997, 1093, 1121
BstV2I GAAGAC 1 cut(s) 492
BstX2I RGATCY 2 cut(s) 58, 353
BstYI RGATCY 2 cut(s) 58, 353
BsuRI GGCC 5 cut(s) 320, 393, 524, 584, 624
BtgZI GCGATG 1 cut(s) 878
BtrI CACGTC 1 cut(s) 506
BtsCI GGATG 3 cut(s) 51, 213, 1159
BtsIMutI CAGTG 2 cut(s) 447, 549
BtuMI TCGCGA 1 cut(s) 96
BveI ACCTGC 1 cut(s) 1004
Cac8I GCNNGC 1 cut(s) 843
CciI TCATGA 1 cut(s) 708
Cfr13I GGNCC 5 cut(s) 254, 368, 522, 583, 1148
CseI GACGC 1 cut(s) 149
Csp6I GTAC 5 cut(s) 687, 772, 811, 1157, 1250
CviAII CATG 4 cut(s) 193, 473, 589, 709
CviQI GTAC 5 cut(s) 687, 772, 811, 1157, 1250
DdeI CTNAG 4 cut(s) 51, 552, 883, 977
DpnI GATC 5 cut(s) 60, 93, 355, 888, 1188
DpnII GATC 5 cut(s) 58, 91, 353, 886, 1186
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 2 cut(s) 75, 564
EarI CTCTTC 2 cut(s) 75, 564
EciI GGCGGA 2 cut(s) 476, 798
Eco147I AGGCCT 1 cut(s) 624
Eco24I GRGCYC 1 cut(s) 876
Eco47I GGWCC 3 cut(s) 254, 368, 1148
Eco57I CTGAAG 1 cut(s) 195
EcoO109I RGGNCCY 2 cut(s) 254, 583
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 2 cut(s) 216, 315
EcoT22I ATGCAT 2 cut(s) 122, 649
EcoT38I GRGCYC 1 cut(s) 876
Esp3I CGTCTC 2 cut(s) 145, 496
FaeI CATG 4 cut(s) 196, 476, 592, 712
FaqI GGGAC 3 cut(s) 240, 354, 896
FatI CATG 4 cut(s) 192, 472, 588, 708
FauNDI CATATG 1 cut(s) 826
FbaI TGATCA 1 cut(s) 1186
FblI GTMKAC 1 cut(s) 300
Fnu4HI GCNGC 5 cut(s) 321, 846, 1011, 1107, 1110
FokI GGATG 3 cut(s) 58, 200, 1166
FriOI GRGCYC 1 cut(s) 876
Fsp4HI GCNGC 5 cut(s) 321, 846, 1011, 1107, 1110
FspBI CTAG 1 cut(s) 360
GluI GCNGC 5 cut(s) 321, 846, 1011, 1107, 1110
HaeIII GGCC 5 cut(s) 320, 393, 524, 584, 624
HapII CCGG 5 cut(s) 491, 876, 954, 1052, 1151
HgaI GACGC 1 cut(s) 149
Hin1II CATG 4 cut(s) 196, 476, 592, 712
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 1 cut(s) 764
HinfI GANTC 3 cut(s) 407, 554, 930
HpaII CCGG 5 cut(s) 491, 876, 954, 1052, 1151
HphI GGTGA 3 cut(s) 881, 1028, 1181
Hpy166II GTNNAC 5 cut(s) 301, 445, 454, 664, 1148
Hpy188I TCNGA 3 cut(s) 871, 970, 1211
Hpy188III TCNNGA 4 cut(s) 95, 169, 397, 709
Hpy8I GTNNAC 5 cut(s) 301, 445, 454, 664, 1148
Hpy99I CGWCG 4 cut(s) 10, 302, 305, 538
HpyAV CCTTC 5 cut(s) 37, 88, 170, 435, 1088
HpyCH4III ACNGT 3 cut(s) 451, 705, 1231
HpyCH4IV ACGT 3 cut(s) 138, 505, 1248
HpyCH4V TGCA 6 cut(s) 120, 602, 647, 830, 1013, 1109
HpyF10VI GCNNNNNNNGC 3 cut(s) 530, 630, 1118
HpyF3I CTNAG 4 cut(s) 51, 552, 883, 977
HpySE526I ACGT 3 cut(s) 138, 505, 1248
Hsp92II CATG 4 cut(s) 196, 476, 592, 712
KflI GGGWCCC 1 cut(s) 254
KpnI GGTACC 1 cut(s) 690
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 5 cut(s) 58, 91, 353, 886, 1186
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 1 cut(s) 630
Lsp1109I GCAGC 4 cut(s) 857, 997, 1093, 1121
LweI GCATC 2 cut(s) 129, 656
MaeI CTAG 1 cut(s) 360
MaeII ACGT 3 cut(s) 138, 505, 1248
MaeIII GTNAC 2 cut(s) 816, 1244
MalI GATC 5 cut(s) 60, 93, 355, 888, 1188
MboI GATC 5 cut(s) 58, 91, 353, 886, 1186
MboII GAAGA 9 cut(s) 62, 65, 199, 497, 506, 551, 1100, 1103, 1226
MflI RGATCY 2 cut(s) 58, 353
MhlI GDGCHC 1 cut(s) 876
MluCI AATT 3 cut(s) 150, 305, 514
MlyI GAGTC 2 cut(s) 416, 563
Mph1103I ATGCAT 2 cut(s) 122, 649
MseI TTAA 5 cut(s) 236, 291, 402, 942, 960
MspA1I CMGCKG 1 cut(s) 1112
MspI CCGG 5 cut(s) 491, 876, 954, 1052, 1151
MspR9I CCNGG 5 cut(s) 218, 317, 491, 876, 1053
MvaI CCWGG 2 cut(s) 218, 317
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 3 cut(s) 530, 630, 1118
NciI CCSGG 3 cut(s) 491, 876, 1053
NdeI CATATG 1 cut(s) 826
NdeII GATC 5 cut(s) 58, 91, 353, 886, 1186
NlaIII CATG 4 cut(s) 196, 476, 592, 712
NlaIV GGNNCC 7 cut(s) 255, 256, 355, 370, 585, 688, 1041
NmuCI GTSAC 1 cut(s) 1244
NruI TCGCGA 1 cut(s) 96
NsiI ATGCAT 2 cut(s) 122, 649
NspI RCATGY 1 cut(s) 476
NspV TTCGAA 2 cut(s) 39, 483
PagI TCATGA 1 cut(s) 708
PaqCI CACCTGC 1 cut(s) 1004
PceI AGGCCT 1 cut(s) 624
PciI ACATGT 1 cut(s) 472
PciSI GCTCTTC 1 cut(s) 75
PcsI WCGNNNNNNNCGW 1 cut(s) 678
PfeI GAWTC 1 cut(s) 930
PkrI GCNGC 5 cut(s) 322, 847, 1012, 1108, 1111
PleI GAGTC 2 cut(s) 415, 562
PpsI GAGTC 2 cut(s) 415, 562
Ppu21I YACGTR 1 cut(s) 1249
PpuMI RGGWCCY 1 cut(s) 254
PscI ACATGT 1 cut(s) 472
PshAI GACNNNNGTC 1 cut(s) 137
Psp5II RGGWCCY 1 cut(s) 254
Psp6I CCWGG 2 cut(s) 216, 315
PspGI CCWGG 2 cut(s) 216, 315
PspN4I GGNNCC 7 cut(s) 255, 256, 355, 370, 585, 688, 1041
PspPI GGNCC 5 cut(s) 254, 368, 522, 583, 1148
PspPPI RGGWCCY 1 cut(s) 254
PstI CTGCAG 2 cut(s) 1015, 1111
PsuI RGATCY 2 cut(s) 58, 353
PvuII CAGCTG 1 cut(s) 1112
RruI TCGCGA 1 cut(s) 96
RsaI GTAC 5 cut(s) 688, 773, 812, 1158, 1251
RsaNI GTAC 5 cut(s) 687, 772, 811, 1157, 1250
SalI GTCGAC 1 cut(s) 299
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 5 cut(s) 236, 291, 402, 942, 960
SatI GCNGC 5 cut(s) 321, 846, 1011, 1107, 1110
Sau3AI GATC 5 cut(s) 58, 91, 353, 886, 1186
Sau96I GGNCC 5 cut(s) 254, 368, 522, 583, 1148
SchI GAGTC 2 cut(s) 416, 563
ScrFI CCNGG 5 cut(s) 218, 317, 491, 876, 1053
SduI GDGCHC 1 cut(s) 876
SfaNI GCATC 2 cut(s) 129, 656
SfcI CTRYAG 2 cut(s) 1011, 1107
SfuI TTCGAA 2 cut(s) 39, 483
SgrDI CGTCGACG 1 cut(s) 299
SinI GGWCC 3 cut(s) 254, 368, 1148
Sse9I AATT 3 cut(s) 150, 305, 514
SseBI AGGCCT 1 cut(s) 624
SsiI CCGC 5 cut(s) 321, 357, 461, 783, 1259
SspI AATATT 1 cut(s) 1062
SspMI CTAG 1 cut(s) 360
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 5 cut(s) 216, 315, 489, 874, 1051
TaaI ACNGT 3 cut(s) 451, 705, 1231
TaiI ACGT 3 cut(s) 141, 508, 1251
TaqI TCGA 6 cut(s) 39, 107, 300, 483, 650, 681
TasI AATT 3 cut(s) 150, 305, 514
TatI WGTACW 1 cut(s) 810
TauI GCSGC 1 cut(s) 323
TfiI GAWTC 1 cut(s) 930
Tru1I TTAA 5 cut(s) 236, 291, 402, 942, 960
Tru9I TTAA 5 cut(s) 236, 291, 402, 942, 960
TscAI CASTG 2 cut(s) 454, 556
TseFI GTSAC 1 cut(s) 1244
TseI GCWGC 4 cut(s) 845, 1010, 1106, 1109
Tsp45I GTSAC 1 cut(s) 1244
TspDTI ATGAA 4 cut(s) 200, 697, 1055, 1066
TspGWI ACGGA 3 cut(s) 286, 759, 1040
TspRI CASTG 2 cut(s) 454, 556
VpaK11BI GGWCC 3 cut(s) 254, 368, 1148
XapI RAATTY 2 cut(s) 305, 514
XceI RCATGY 1 cut(s) 476
XmiI GTMKAC 1 cut(s) 300
XspI CTAG 1 cut(s) 360
Zsp2I ATGCAT 2 cut(s) 122, 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.