AT1G51790

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000083
Physical Location & Seq
Reverse (-)
19206615 .. 19211971
5357 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G51790.2

Sequence Viewer

Length: 2649 bp
ATGATGACATCGAAGGCGAAGGCGCTTACGTTCATTTGTTGTGTGGCTCTTCTCAATCTTGCCATTGCCCAGGATCAATCAGGGTTCATTAGCATAGATTGCGGGTTACAACCAGAAAATTCCAGCTACACGGAAACATCGACCGATATTAAGTATGTTTCGGATTCAAGTTATACGGATACAGGGACAAGCTATTTCGTTGCGCCTGAAAATAGACAAAATATGAAGCAGAGCATGTGGTCCGTCAGAAGTTTTCCAGAGGGAATCAGAAACTGTTACACTATTGCTGTTAATAGCAGCACCAAGTATCTGATCCGGGCGGATTTTATGTACGGTAACTACGATTCGAGAAACGAGATACCGGGTTTCGATCTTCACTTAGGTCCAAACAAATGGGACACTGTTGAATTGGTGTCTCCTCTGCAAACAGTGTCCAAGGAGATCATATATTATGTGTTGACAGATACAATACAAGTGTGTTTAGTGAATACAGGAAATGGTACGCCTTTTATATCGGTATTGGAACTTAGACAGTTGCCGAATTCTTCCTATGCAGCTCAATCTGAATCACTTCAACTATTTCAACGGTTGGATTTTGGATCAACGACAAATCTAACGGTTAGGTATCCAAACGATGTTTTTGATCGGATTTGGTTTCCCGCCACGCCAAATGGGACGAAGCCGTTAAGTGACCCGTCGACTTCTCTCACAAGCAACAGTACCGGTAATTTCCGTCTTCCACAAGTTGTAATGAGAACTGGAATTGTACCAGATAATCCAAGAGGATTTGTAGATTTTGGATGGATTCCAGATGATCCGTCTCTTGAGTTTTTCTTTTACTTGTATTTCACGGAACTTCAACAACCTAATTCCGGAACCGTAGAAACAAGAGAATTCGTGATCTTGTTGAACGGGAAGTCTTTTGGGGAACCGTTAAGTCTTAACTACTTCCGGACCTTAGCCTTGTTCACTTCAAACCCTTTGAAAGCAGAGAGCTTCCAGTTTTCTCTTCGTCAGACTCAGAGTTCATCTCTTCCACCTCTGATCAATGCTATGGAGACTTACTTTGTAAACAAACTTCCACAATCATCAACGGATCCAAACGACCTTTCTGCTATGAGGAATATTAAGTCTGCATATAAAGTCAAGAGAAACTGGGAAGGAGACGTGTGTGTGCCTCAAGCTTACACATGGGAAGGTCTGAATTGTAGCTTCAATGGCACAAACATGCCAAGAGTAATAGCATTAAACTTATCGTCCGCCGGATTGACTGGAGAGATAACGTCTGATATATCGCGTCTTTCGCAGTTGCAAATTCTGGACTTATCAAATAACAATTTGAGTGGACCTGCAGTACCAGCTTTCTTAGCGCAACTCCAATTCCTGAGAGTCCTACATTTGGCGAACAACCAGCTTAGTGGTCCTATACCCTCTAGTCTCATAGAGAGACTAGACTCGTTTAGTGGGAATCCAAGTATTTGTTCTGCAAATGCGTGTGAAGAGGTCTCACAAAATAGATCAAAGAAGAATAAACTTCCCAGCTTTGTCATTCCTTTAGTTGCATCACTTGCAGGGCTGCTTCTTCTTTTTATCATATCTGCAGCTATATTTTTAATCCTCATGAGAAAAAAGAAACAAGACTACGGAGGGAATGAAACAGCGGTTGATGCGTTTGATTTGGAACCATCAAATAGGAAGTTTACATATGCAGAGATTGTGAACATTACAAATGGGTTTGATAGAGATCAAGGGAAGGTAGGATTTGGAAGAAACTACCTTGGAAAGTTAGATGGTAAAGAAGTAACTGTCAAGCTTGTTTCTTCACTATCTTCTCAAGGCTACAAACAACTCAGAGCAGAGGTCAAACATCTTTTCAGAATTCATCATAAAAACCTTATAACCATGCTTGGTTACTGCAACGAAGGCGATAAAATGGCGGTTATATACGAGTACATGGCTAATGGAAACTTGAAACAACATATCTCAGAGAACAGTACAACTGTTTTTAGCTGGGAAGATAGGCTCGGTATCGCGGTTGATGTCGCGCAAGGACTTGAGTATTTGCATACTGGTTGCAAGCCGCCGATCATTCATAGAAACGTCAAGTGTACAAATGTATTCTTAGATGAAAGTTTCAATGCGAAGTTAGGCGGTTTTGGCCTTTCGAGAGCGTTTGATGCAGCCGAGGGAAGTCATTTGAATACAGCTATTGCTGGGACTCCTGGATATGTTGACCCCGAGTATTACACATCAAACATGTTAACAGAGAAGAGTGATGTGTACAGTTTCGGTGTAGTTCTATTAGAGATCGTTACTGCGAAACCCGCTATCATAAAGAATGAGGAAAGGATGCATATAAGTCAATGGGTTGAGTCTTTGCTTTCAAGAGAAAATATTGTAGAGATTCTTGACCCGAGTCTTTGCGGAGACTATGACCCAAACTCGGCATTCAAGACCGTGGAAATAGCCGTGGCTTGCGTTTGTCGAAATTCGGGCGACAGACCTGGGATGAGTCAAGTGGTGACGGCTCTTAAGGAGAGTTTAGCTGTAGAAGTTGAGAGGAAAAAGCATTTGCCGGTTGGATCAACAGATTCACTTGAAGAGCTTGCACTTGGCTTTGGATCTAATCCACCTCCTCGTTTGAGATGA

Protein Analysis

882

Amino Acids

97.78

Weight (kDa)

5.6

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 357 1.2e-110 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 636 - 894 3.7e-37 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 636 - 893 8.2e-36 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1898
Acc36I ACCTGC 1 cut(s) 1357
AccI GTMKAC 1 cut(s) 698
AccII CGCG 3 cut(s) 1297, 2033, 2045
AccIII TCCGGA 2 cut(s) 872, 951
AclWI GGATC 8 cut(s) 81, 307, 607, 809, 1091, 1104, 2590, 2629
AcsI RAATTY 6 cut(s) 118, 541, 893, 1314, 1878, 2488
AfaI GTAC 9 cut(s) 332, 502, 721, 768, 1356, 1952, 1996, 2110, 2282
AfiI CCNNNNNNNGG 3 cut(s) 872, 1399, 2443
AflII CTTAAG 1 cut(s) 2531
AflIII ACRYGT 2 cut(s) 1167, 2256
AgeI ACCGGT 1 cut(s) 722
AjiI CACGTC 1 cut(s) 1168
AjnI CCWGG 3 cut(s) 69, 2221, 2503
AjuI GAANNNNNNNTTGG 4 cut(s) 1093, 1125, 1465, 1497
Alw26I GTCTC 8 cut(s) 420, 825, 1052, 1158, 1441, 1442, 1510, 2421
AlwI GGATC 8 cut(s) 81, 307, 607, 809, 1091, 1104, 2590, 2629
AlwNI CAGNNNCTG 1 cut(s) 273
Ama87I CYCGRG 2 cut(s) 2237, 2413
Aor13HI TCCGGA 2 cut(s) 872, 951
AoxI GGCC 1 cut(s) 2158
ApeKI GCWGC 5 cut(s) 297, 554, 1576, 1601, 2180
ApoI RAATTY 6 cut(s) 118, 541, 893, 1314, 1878, 2488
AsiGI ACCGGT 1 cut(s) 722
Asp700I GAANNNNTTC 1 cut(s) 570
AspLEI GCGC 4 cut(s) 25, 205, 1372, 2047
AspS9I GGNCC 5 cut(s) 240, 383, 954, 1346, 1421
AsuC2I CCSGG 2 cut(s) 317, 363
AsuHPI GGTGA 1 cut(s) 2533
AvaI CYCGRG 2 cut(s) 2237, 2413
AvaII GGWCC 5 cut(s) 240, 383, 954, 1346, 1421
BamHI GGATCC 1 cut(s) 1096
BarI GAAGNNNNNNTAC 2 cut(s) 1062, 1094
BbsI GAAGAC 1 cut(s) 728
BbvI GCAGC 5 cut(s) 309, 566, 1563, 1613, 2192
BccI CCATC 3 cut(s) 795, 1693, 1784
BceAI ACGGC 3 cut(s) 667, 2453, 2541
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BciT130I CCWGG 3 cut(s) 71, 2223, 2505
BciVI GTATCC 2 cut(s) 172, 636
BclI TGATCA 1 cut(s) 1044
BcnI CCSGG 2 cut(s) 317, 363
BcoDI GTCTC 8 cut(s) 420, 825, 1052, 1158, 1441, 1442, 1510, 2421
BfaI CTAG 2 cut(s) 1434, 1451
BfmI CTRYAG 3 cut(s) 1350, 1599, 2547
BfoI RGCGCY 1 cut(s) 26
BfrI CTTAAG 1 cut(s) 2531
BfuAI ACCTGC 1 cut(s) 1357
BfuI GTATCC 2 cut(s) 172, 636
BisI GCNGC 6 cut(s) 298, 555, 1577, 1602, 2081, 2181
BlsI GCNGC 6 cut(s) 299, 556, 1578, 1603, 2082, 2182
Bme1390I CCNGG 5 cut(s) 71, 317, 363, 2223, 2505
Bme18I GGWCC 5 cut(s) 240, 383, 954, 1346, 1421
BmeT110I CYCGRG 2 cut(s) 2237, 2413
BmgBI CACGTC 1 cut(s) 1168
BmgT120I GGNCC 5 cut(s) 240, 383, 954, 1346, 1421
BmiI GGNNCC 4 cut(s) 877, 930, 1098, 1683
BmrFI CCNGG 5 cut(s) 71, 317, 363, 2223, 2505
BmrI ACTGGG 1 cut(s) 1165
BmsI GCATC 4 cut(s) 1571, 1657, 2167, 2340
BmuI ACTGGG 1 cut(s) 1165
BoxI GACNNNNGTC 1 cut(s) 2415
BpiI GAAGAC 1 cut(s) 728
BplI GAGNNNNNCTC 2 cut(s) 1015, 1047
BpmI CTGGAG 1 cut(s) 1293
Bpu10I CCTNAGC 1 cut(s) 958
BpuEI CTTGAG 4 cut(s) 845, 1164, 1818, 2075
BpuMI CCSGG 2 cut(s) 317, 363
BsaBI GATNNNNATC 1 cut(s) 1743
BsaI GGTCTC 1 cut(s) 1510
BsaJI CCNNGG 7 cut(s) 69, 435, 1777, 2184, 2457, 2469, 2504
BsaWI WCCGGW 3 cut(s) 722, 872, 951
Bsc4I CCNNNNNNNGG 3 cut(s) 872, 1399, 2443
Bse118I RCCGGY 2 cut(s) 722, 2575
Bse1I ACTGG 5 cut(s) 763, 1000, 1160, 1276, 2074
Bse3DI GCAATG 1 cut(s) 63
Bse8I GATNNNNATC 1 cut(s) 1743
BseAI TCCGGA 2 cut(s) 872, 951
BseBI CCWGG 3 cut(s) 71, 2223, 2505
BseDI CCNNGG 7 cut(s) 69, 435, 1777, 2184, 2457, 2469, 2504
BseGI GGATG 3 cut(s) 806, 2355, 2514
BseJI GATNNNNATC 1 cut(s) 1743
BseLI CCNNNNNNNGG 3 cut(s) 872, 1399, 2443
BseMI GCAATG 1 cut(s) 63
BseMII CTCAG 4 cut(s) 1034, 1376, 1864, 1998
BseNI ACTGG 5 cut(s) 763, 1000, 1160, 1276, 2074
BseRI GAGGAG 2 cut(s) 408, 2625
BseXI GCAGC 5 cut(s) 309, 566, 1563, 1613, 2192
BseYI CCCAGC 3 cut(s) 1538, 2010, 2213
Bsh1236I CGCG 3 cut(s) 1297, 2033, 2045
Bsh1285I CGRYCG 1 cut(s) 144
BshFI GGCC 1 cut(s) 2160
BshTI ACCGGT 1 cut(s) 722
BsiEI CGRYCG 1 cut(s) 144
BsiHKCI CYCGRG 2 cut(s) 2237, 2413
BsiSI CCGG 7 cut(s) 316, 362, 723, 873, 952, 1263, 2576
BslFI GGGAC 4 cut(s) 199, 410, 688, 2230
BslI CCNNNNNNNGG 3 cut(s) 872, 1399, 2443
BsmAI GTCTC 8 cut(s) 420, 825, 1052, 1158, 1441, 1442, 1510, 2421
BsmBI CGTCTC 2 cut(s) 825, 1158
BsmFI GGGAC 4 cut(s) 199, 410, 688, 2230
BsmI GAATGC 1 cut(s) 2447
BsnI GGCC 1 cut(s) 2160
Bso31I GGTCTC 1 cut(s) 1510
BsoBI CYCGRG 2 cut(s) 2237, 2413
Bsp13I TCCGGA 2 cut(s) 872, 951
Bsp1407I TGTACA 2 cut(s) 2108, 2280
BspANI GGCC 1 cut(s) 2160
BspCNI CTCAG 4 cut(s) 1033, 1377, 1863, 1997
BspEI TCCGGA 2 cut(s) 872, 951
BspFNI CGCG 3 cut(s) 1297, 2033, 2045
BspHI TCATGA 1 cut(s) 1620
BspLI GGNNCC 4 cut(s) 877, 930, 1098, 1683
BspMAI CTGCAG 2 cut(s) 1354, 1603
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 8 cut(s) 81, 307, 607, 809, 1091, 1104, 2590, 2629
BspQI GCTCTTC 2 cut(s) 54, 2595
BspTI CTTAAG 1 cut(s) 2531
BspTNI GGTCTC 1 cut(s) 1510
BsrDI GCAATG 1 cut(s) 63
BsrFI RCCGGY 2 cut(s) 722, 2575
BsrGI TGTACA 2 cut(s) 2108, 2280
BsrI ACTGG 5 cut(s) 763, 1000, 1160, 1276, 2074
BssAI RCCGGY 2 cut(s) 722, 2575
BssECI CCNNGG 7 cut(s) 69, 435, 1777, 2184, 2457, 2469, 2504
BssT1I CCWWGG 2 cut(s) 435, 1777
Bst2UI CCWGG 3 cut(s) 71, 2223, 2505
Bst6I CTCTTC 6 cut(s) 54, 1014, 1038, 1494, 2264, 2595
BstAFI CTTAAG 1 cut(s) 2531
BstAPI GCANNNNNTGC 2 cut(s) 99, 1568
BstAUI TGTACA 2 cut(s) 2108, 2280
BstC8I GCNNGC 3 cut(s) 2078, 2476, 2607
BstDSI CCRYGG 2 cut(s) 2457, 2469
BstF5I GGATG 3 cut(s) 806, 2355, 2514
BstFNI CGCG 3 cut(s) 1297, 2033, 2045
BstH2I RGCGCY 1 cut(s) 26
BstHHI GCGC 4 cut(s) 25, 205, 1372, 2047
BstMAI GTCTC 8 cut(s) 420, 825, 1052, 1158, 1441, 1442, 1510, 2421
BstMCI CGRYCG 1 cut(s) 144
BstNI CCWGG 3 cut(s) 71, 2223, 2505
BstNSI RCATGY 3 cut(s) 238, 1231, 2260
BstPAI GACNNNNGTC 1 cut(s) 2415
BstSCI CCNGG 5 cut(s) 69, 315, 361, 2221, 2503
BstSFI CTRYAG 3 cut(s) 1350, 1599, 2547
BstUI CGCG 3 cut(s) 1297, 2033, 2045
BstV1I GCAGC 5 cut(s) 309, 566, 1563, 1613, 2192
BstV2I GAAGAC 1 cut(s) 728
BstX2I RGATCY 2 cut(s) 1096, 2621
BstXI CCANNNNNNTGG 2 cut(s) 393, 1418
BstYI RGATCY 2 cut(s) 1096, 2621
BsuI GTATCC 2 cut(s) 172, 636
BsuRI GGCC 1 cut(s) 2160
BtgI CCRYGG 2 cut(s) 2457, 2469
BtrI CACGTC 1 cut(s) 1168
BtsCI GGATG 3 cut(s) 806, 2355, 2514
BtsIMutI CAGTG 2 cut(s) 399, 435
BveI ACCTGC 1 cut(s) 1357
Cac8I GCNNGC 3 cut(s) 2078, 2476, 2607
CaiI CAGNNNCTG 1 cut(s) 273
CciI TCATGA 1 cut(s) 1620
CfoI GCGC 4 cut(s) 25, 205, 1372, 2047
Cfr10I RCCGGY 2 cut(s) 722, 2575
Cfr13I GGNCC 5 cut(s) 240, 383, 954, 1346, 1421
CseI GACGC 1 cut(s) 1286
Csp6I GTAC 9 cut(s) 331, 501, 720, 767, 1355, 1951, 1995, 2109, 2281
CspAI ACCGGT 1 cut(s) 722
CspCI CAANNNNNGTGG 2 cut(s) 1324, 1359
CviAII CATG 7 cut(s) 235, 1191, 1228, 1621, 1903, 1954, 2257
CviQI GTAC 9 cut(s) 331, 501, 720, 767, 1355, 1951, 1995, 2109, 2281
Eam1104I CTCTTC 6 cut(s) 54, 1014, 1038, 1494, 2264, 2595
EarI CTCTTC 6 cut(s) 54, 1014, 1038, 1494, 2264, 2595
EciI GGCGGA 2 cut(s) 335, 1249
Eco130I CCWWGG 2 cut(s) 435, 1777
Eco31I GGTCTC 1 cut(s) 1510
Eco47I GGWCC 5 cut(s) 240, 383, 954, 1346, 1421
Eco88I CYCGRG 2 cut(s) 2237, 2413
EcoRI GAATTC 3 cut(s) 541, 893, 1878
EcoRII CCWGG 3 cut(s) 69, 2221, 2503
EcoT14I CCWWGG 2 cut(s) 435, 1777
EcoT22I ATGCAT 1 cut(s) 2355
ErhI CCWWGG 2 cut(s) 435, 1777
Esp3I CGTCTC 2 cut(s) 825, 1158
FaeI CATG 7 cut(s) 238, 1194, 1231, 1624, 1906, 1957, 2260
FaqI GGGAC 4 cut(s) 199, 410, 688, 2230
FatI CATG 7 cut(s) 234, 1190, 1227, 1620, 1902, 1953, 2256
FauI CCCGC 3 cut(s) 95, 667, 2332
FauNDI CATATG 1 cut(s) 1705
FbaI TGATCA 1 cut(s) 1044
FblI GTMKAC 1 cut(s) 698
Fnu4HI GCNGC 6 cut(s) 298, 555, 1577, 1602, 2081, 2181
FokI GGATG 3 cut(s) 813, 2362, 2521
Fsp4HI GCNGC 6 cut(s) 298, 555, 1577, 1602, 2081, 2181
FspBI CTAG 2 cut(s) 1434, 1451
GlaI GCGC 4 cut(s) 24, 204, 1371, 2046
GluI GCNGC 6 cut(s) 298, 555, 1577, 1602, 2081, 2181
GsaI CCCAGC 3 cut(s) 1542, 2014, 2217
GsuI CTGGAG 1 cut(s) 1293
HaeII RGCGCY 1 cut(s) 26
HaeIII GGCC 1 cut(s) 2160
HapII CCGG 7 cut(s) 316, 362, 723, 873, 952, 1263, 2576
HgaI GACGC 1 cut(s) 1286
HhaI GCGC 4 cut(s) 25, 205, 1372, 2047
Hin1II CATG 7 cut(s) 238, 1194, 1231, 1624, 1906, 1957, 2260
Hin6I GCGC 4 cut(s) 23, 203, 1370, 2045
HinP1I GCGC 4 cut(s) 23, 203, 1370, 2045
HincII GTYRAC 4 cut(s) 459, 699, 2233, 2262
HindII GTYRAC 4 cut(s) 459, 699, 2233, 2262
HindIII AAGCTT 2 cut(s) 1182, 1811
HpaI GTTAAC 1 cut(s) 2262
HpaII CCGG 7 cut(s) 316, 362, 723, 873, 952, 1263, 2576
HphI GGTGA 1 cut(s) 2533
Hpy99I CGWCG 1 cut(s) 700
HpyAV CCTTC 6 cut(s) 7, 13, 1154, 1190, 1747, 1916
HpyCH4IV ACGT 4 cut(s) 29, 1167, 1283, 2100
HpySE526I ACGT 4 cut(s) 29, 1167, 1283, 2100
Hsp92II CATG 7 cut(s) 238, 1194, 1231, 1624, 1906, 1957, 2260
HspAI GCGC 4 cut(s) 23, 203, 1370, 2045
Kpn2I TCCGGA 2 cut(s) 872, 951
Ksp22I TGATCA 1 cut(s) 1044
KspAI GTTAAC 1 cut(s) 2262
LguI GCTCTTC 2 cut(s) 54, 2595
Lsp1109I GCAGC 5 cut(s) 309, 566, 1563, 1613, 2192
LweI GCATC 4 cut(s) 1571, 1657, 2167, 2340
MaeI CTAG 2 cut(s) 1434, 1451
MaeII ACGT 4 cut(s) 29, 1167, 1283, 2100
MaeIII GTNAC 8 cut(s) 105, 275, 335, 689, 1801, 1910, 2311, 2521
MflI RGATCY 2 cut(s) 1096, 2621
MlyI GAGTC 7 cut(s) 1012, 1398, 1448, 2212, 2381, 2425, 2521
MmeI TCCRAC 2 cut(s) 570, 2560
Mph1103I ATGCAT 1 cut(s) 2355
MroI TCCGGA 2 cut(s) 872, 951
MroXI GAANNNNTTC 1 cut(s) 570
MslI CAYNNNNRTG 1 cut(s) 1226
MspA1I CMGCKG 1 cut(s) 1661
MspCI CTTAAG 1 cut(s) 2531
MspI CCGG 7 cut(s) 316, 362, 723, 873, 952, 1263, 2576
MspR9I CCNGG 5 cut(s) 71, 317, 363, 2223, 2505
Mva1269I GAATGC 1 cut(s) 2447
MvaI CCWGG 3 cut(s) 71, 2223, 2505
MvnI CGCG 3 cut(s) 1297, 2033, 2045
NciI CCSGG 2 cut(s) 317, 363
NdeI CATATG 1 cut(s) 1705
NlaIII CATG 7 cut(s) 238, 1194, 1231, 1624, 1906, 1957, 2260
NlaIV GGNNCC 4 cut(s) 877, 930, 1098, 1683
NmeAIII GCCGAG 2 cut(s) 2209, 2423
NmuCI GTSAC 2 cut(s) 689, 2521
NsiI ATGCAT 1 cut(s) 2355
NspI RCATGY 3 cut(s) 238, 1231, 2260
PagI TCATGA 1 cut(s) 1620
PciI ACATGT 1 cut(s) 2256
PciSI GCTCTTC 2 cut(s) 54, 2595
PcsI WCGNNNNNNNCGW 2 cut(s) 137, 339
PctI GAATGC 1 cut(s) 2447
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 8 cut(s) 164, 264, 344, 566, 805, 1468, 2404, 2591
PfoI TCCNGGA 1 cut(s) 2221
PinAI ACCGGT 1 cut(s) 722
PkrI GCNGC 6 cut(s) 299, 556, 1578, 1603, 2082, 2182
PleI GAGTC 7 cut(s) 1012, 1397, 1448, 2212, 2380, 2424, 2520
PpsI GAGTC 7 cut(s) 1012, 1397, 1448, 2212, 2380, 2424, 2520
PscI ACATGT 1 cut(s) 2256
PshAI GACNNNNGTC 1 cut(s) 2415
PsiI TTATAA 1 cut(s) 1898
Psp6I CCWGG 3 cut(s) 69, 2221, 2503
PspFI CCCAGC 3 cut(s) 1538, 2010, 2213
PspGI CCWGG 3 cut(s) 69, 2221, 2503
PspN4I GGNNCC 4 cut(s) 877, 930, 1098, 1683
PspPI GGNCC 5 cut(s) 240, 383, 954, 1346, 1421
PstI CTGCAG 2 cut(s) 1354, 1603
PstNI CAGNNNCTG 1 cut(s) 273
PsuI RGATCY 2 cut(s) 1096, 2621
RsaI GTAC 9 cut(s) 332, 502, 721, 768, 1356, 1952, 1996, 2110, 2282
RsaNI GTAC 9 cut(s) 331, 501, 720, 767, 1355, 1951, 1995, 2109, 2281
RseI CAYNNNNRTG 1 cut(s) 1226
SalI GTCGAC 1 cut(s) 697
SapI GCTCTTC 2 cut(s) 54, 2595
SatI GCNGC 6 cut(s) 298, 555, 1577, 1602, 2081, 2181
Sau96I GGNCC 5 cut(s) 240, 383, 954, 1346, 1421
SchI GAGTC 7 cut(s) 1012, 1398, 1448, 2212, 2381, 2425, 2521
ScrFI CCNGG 5 cut(s) 71, 317, 363, 2223, 2505
SfaNI GCATC 4 cut(s) 1571, 1657, 2167, 2340
SfcI CTRYAG 3 cut(s) 1350, 1599, 2547
SinI GGWCC 5 cut(s) 240, 383, 954, 1346, 1421
SmiMI CAYNNNNRTG 1 cut(s) 1226
SmlI CTYRAG 5 cut(s) 824, 1179, 1833, 2054, 2531
SmoI CTYRAG 5 cut(s) 824, 1179, 1833, 2054, 2531
SspI AATATT 2 cut(s) 1126, 2395
SspMI CTAG 2 cut(s) 1434, 1451
StyD4I CCNGG 5 cut(s) 69, 315, 361, 2221, 2503
StyI CCWWGG 2 cut(s) 435, 1777
TaiI ACGT 4 cut(s) 32, 1170, 1286, 2103
TaqI TCGA 7 cut(s) 11, 140, 347, 369, 698, 2165, 2485
TaqII GACCGA 1 cut(s) 158
TatI WGTACW 4 cut(s) 1950, 1994, 2108, 2280
TauI GCSGC 1 cut(s) 2083
TfiI GAWTC 8 cut(s) 164, 264, 344, 566, 805, 1468, 2404, 2591
TscAI CASTG 2 cut(s) 406, 435
TseFI GTSAC 2 cut(s) 689, 2521
TseI GCWGC 5 cut(s) 297, 554, 1576, 1601, 2180
Tsp45I GTSAC 2 cut(s) 689, 2521
TspDTI ATGAA 8 cut(s) 22, 76, 239, 1017, 1668, 1871, 2081, 2142
TspGWI ACGGA 8 cut(s) 146, 191, 232, 722, 807, 866, 1109, 1659
TspRI CASTG 2 cut(s) 406, 435
Vha464I CTTAAG 1 cut(s) 2531
VpaK11BI GGWCC 5 cut(s) 240, 383, 954, 1346, 1421
XapI RAATTY 6 cut(s) 118, 541, 893, 1314, 1878, 2488
XceI RCATGY 3 cut(s) 238, 1231, 2260
XmiI GTMKAC 1 cut(s) 698
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 2 cut(s) 1434, 1451
Zsp2I ATGCAT 1 cut(s) 2355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.