Prupe.3G019400_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Reverse (-)
1389675 .. 1399260
9586 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G019400.1

Sequence Viewer

Length: 2148 bp
ATGCATACGGGAGGAGGGCTCTTTTGTCTGTCTTTCATTTCGGCCGCAACTGGAAGGGGTTCCTTCTTTGAGCATCATCATCATCACATTTTTCTTAGTCAGACCTGCCCAGGCCACCAAGAAATCACCCTTTTCGAGAGAATTAGCGCATTTACCACAATTACTGCTGGAGTAAGCCAAGACCTTCCTACGCGTGATAAACAATATGAAAATACCTGTAGGATATCTATAAAAGCCTGGAGAAGAATAATTTGGATTGGCTATGCAAGTGAACCAATTGAGTGGCTTGTAGAAAAATCAGACACAGAGAATGTAAAGAGAACTTTATCTGACAGTGATAAGCTACATATGGTTAAGAAAGGACCAACAATTATGTCTTGCTTCTCAAACTTTAATGATGTCGGTACAGTCAAGCAATTCCTCTTCACACTGCACCTTGGTCTTAGTCTTCTGCTCCTAGTTCATGCCCAGGATGATCAAGACAATCAGAAAGTTACCTATACCGAAACGACAACAAAAATTCGCTACATTTCAGACGCAAGCTTCATAGACACCGGTGAAAGTAAATCCGTGTTGAATGAGTTTAGAGATGACTATCAACAACCCTACTGGTCTCTAAGGAGCTTCCCTGAAGGAACCAGGAACTGGAACTGCTACAACATAAACGTCACAAGTGGCATCAAATATTTGATCAGAGCAAGTTTTGTTTATGGGAATTATGATGGCCAAGAAAAAGCACCTGAGTTTGAACTCCATCTTGGAGCTAACTTATGGGAGTCAATACGGTTTGAGAATGCCTCCATAGCAGCAGCACACAAAGAGCTTATACATGTCCCACTGCGAAGCTACATACATGTCTGTCTGGTGAACACAGGCTCCGGCGTTCCATTTATATCAGCAATAGAACTCAGGCCTTTACTTAATGCATCTTATCCAACACAAGTGGGGTCGTTGGCGCTTGAGATGCGATTTGATACTGGTCAAGTACCAACTGATTTTGAAGGATACAGGTATCCGTTCGATGTTCATGATCGCTTCTGCAATGATTACCAACCACCTCCTATTGTGATGCGTACTGCTGCAACGCCAAGACGTGCGAATGCCTCCTTGGATTTCTTCTGGCTGCCTGCTGATGACAAGGCATCATACTATGTATACATGCACTTTGCAGAAGTTGAAAAGCTACAAGCAAACCAATCCAGACTGCAATACATTACTAGGAACGGGCAGGTCATTTATGAGTCATTTGCTCCTGATTACTTGTACACAAATACTATTTTTAGCCCTGCCGCTTTGAGTGGAGGACAATATAATTTTTCAATCCGTAAGGCAGAGAACTCTACCCTTCCACCCATCCTCAACGCCATTGAGATTTACACATTGAAGGAATTCTTAGAGTTAGAAACAAACCAAGAAGATATTGACGCAATCAACATCATCAAGTCAACATATAAGATTAAAAAGAACTGGCAAGGAGATCCATGTGCCCCTCAAGCTTACTTGTGGGAAGGGGTAAAGTGTAGCTATCCTCAAAATGACTCCCCAAGAATCATATCCTTGGACTTATCCTCGAGCGGATTAACAAGGGAGATAGCTCCTTCTATATCCAACCTTACAGTGATTCAGACATTGGATTTATCAAACAACAACTTGACAGGACCAATTCCTGACTTTTTGTCTCAATTGCCAGACTTAAATGTCATAAACTTGGAGAAAAACAAGCTCGCAGGCTCAGTTCCAGTAGGACTGATTGAAAGAAGGAAGAATGGTTTTCTATCATTAAGTTTGTGTGCAAATCCAAATCTATCCGGAAATGTTTCTTGCAAAAAGAAGCGCAATTTTGTTATTCCCGTAGTTGCGTCAGTCGCTGGAATCTCCATCCTCTTATTATCTGTAGCAGCTCTCTGTTGGGGCATTAAACGGAAAAGACAACCTGGAGCTGTCACAGATGCAAATCCTATCATTGCACCAGTGGAGGCAAGGAAACGACAGTTTACATACTCTGAGATCCTCCAGATCACCAACAATTTAAAGAGGATTCTTGGCAAAGGTGGATTTGGAACAGTTTATCATGGATGCATAGACAAAACTCAAGTTTATCTGCTGATGAGAGTTCATCATATTAACTTGACAAGCCTTGTAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

716

Amino Acids

80.48

Weight (kDa)

7.58

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1697
Acc36I ACCTGC 2 cut(s) 113, 1219
AccB7I CCANNNNNTGG 1 cut(s) 645
AccBSI CCGCTC 1 cut(s) 1575
AccI GTMKAC 1 cut(s) 1155
AccII CGCG 1 cut(s) 193
AccIII TCCGGA 1 cut(s) 1808
AciI CCGC 3 cut(s) 45, 1290, 1575
AclWI GGATC 2 cut(s) 1472, 2002
AcoI YGGCCR 2 cut(s) 42, 724
AcsI RAATTY 2 cut(s) 519, 1388
AcuI CTGAAG 1 cut(s) 651
AfaI GTAC 4 cut(s) 406, 987, 1075, 1265
AfiI CCNNNNNNNGG 1 cut(s) 645
AflIII ACRYGT 3 cut(s) 191, 829, 853
AgeI ACCGGT 1 cut(s) 554
AgsI TTSAA 7 cut(s) 577, 749, 1001, 1178, 1320, 1384, 1754
AhdI GACNNNNNGTC 1 cut(s) 1675
AjiI CACGTC 1 cut(s) 1094
AjnI CCWGG 5 cut(s) 109, 236, 468, 638, 1933
AjuI GAANNNNNNNTTGG 6 cut(s) 235, 267, 741, 773, 1091, 1123
AloI GAACNNNNNNTCC 2 cut(s) 860, 892
Alw26I GTCTC 2 cut(s) 618, 1683
AlwI GGATC 2 cut(s) 1472, 2002
AlwNI CAGNNNCTG 2 cut(s) 645, 1868
Ama87I CYCGRG 1 cut(s) 1570
Aor13HI TCCGGA 1 cut(s) 1808
AoxI GGCC 4 cut(s) 42, 112, 724, 911
ApeKI GCWGC 5 cut(s) 806, 809, 1079, 1123, 1898
ApoI RAATTY 2 cut(s) 519, 1388
AsiGI ACCGGT 1 cut(s) 554
Asp700I GAANNNNTTC 3 cut(s) 58, 1388, 1816
AspLEI GCGC 3 cut(s) 149, 958, 1836
AspS9I GGNCC 2 cut(s) 362, 1658
AsuHPI GGTGA 4 cut(s) 118, 569, 877, 2011
AvaI CYCGRG 1 cut(s) 1570
AvaII GGWCC 2 cut(s) 362, 1658
BaeGI GKGCMC 1 cut(s) 1489
BalI TGGCCA 1 cut(s) 726
BanII GRGCYC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 440
BbvI GCAGC 5 cut(s) 818, 821, 1066, 1110, 1910
BccI CCATC 4 cut(s) 716, 762, 1361, 1886
BciT130I CCWGG 5 cut(s) 111, 238, 470, 640, 1935
BciVI GTATCC 2 cut(s) 998, 1023
BclI TGATCA 2 cut(s) 475, 690
BcoDI GTCTC 2 cut(s) 618, 1683
BfaI CTAG 2 cut(s) 458, 1218
BfmI CTRYAG 2 cut(s) 217, 1893
BfoI RGCGCY 1 cut(s) 959
BfuAI ACCTGC 2 cut(s) 113, 1219
BfuI GTATCC 2 cut(s) 998, 1023
BisI GCNGC 7 cut(s) 45, 807, 810, 1080, 1124, 1290, 1899
BlsI GCNGC 7 cut(s) 46, 808, 811, 1081, 1125, 1291, 1900
Bme1390I CCNGG 5 cut(s) 111, 238, 470, 640, 1935
Bme18I GGWCC 2 cut(s) 362, 1658
BmeRI GACNNNNNGTC 1 cut(s) 1675
BmeT110I CYCGRG 1 cut(s) 1570
BmgBI CACGTC 1 cut(s) 1094
BmgT120I GGNCC 2 cut(s) 362, 1658
BmiI GGNNCC 3 cut(s) 61, 637, 877
BmrFI CCNGG 5 cut(s) 111, 238, 470, 640, 1935
BmsI GCATC 8 cut(s) 82, 687, 935, 954, 1059, 1151, 1939, 2066
BpiI GAAGAC 1 cut(s) 440
BplI GAGNNNNNCTC 3 cut(s) 35, 782, 814
BpmI CTGGAG 4 cut(s) 189, 259, 1956, 1997
BpuEI CTTGAG 3 cut(s) 980, 1476, 2076
BsaBI GATNNNNATC 2 cut(s) 594, 1953
BsaI GGTCTC 1 cut(s) 618
BsaJI CCNNGG 5 cut(s) 109, 436, 468, 1107, 1557
BsaWI WCCGGW 2 cut(s) 554, 1808
BsaXI ACNNNNNCTCC 2 cut(s) 860, 890
Bsc4I CCNNNNNNNGG 1 cut(s) 645
Bse118I RCCGGY 1 cut(s) 554
Bse1I ACTGG 7 cut(s) 55, 614, 650, 982, 1472, 1739, 1970
Bse3DI GCAATG 2 cut(s) 1048, 1962
Bse8I GATNNNNATC 2 cut(s) 594, 1953
BseAI TCCGGA 1 cut(s) 1808
BseBI CCWGG 5 cut(s) 111, 238, 470, 640, 1935
BseDI CCNNGG 5 cut(s) 109, 436, 468, 1107, 1557
BseGI GGATG 4 cut(s) 478, 1353, 1878, 2081
BseJI GATNNNNATC 2 cut(s) 594, 1953
BseLI CCNNNNNNNGG 1 cut(s) 645
BseMI GCAATG 2 cut(s) 1048, 1962
BseMII CTCAG 4 cut(s) 732, 922, 1746, 1995
BseNI ACTGG 7 cut(s) 55, 614, 650, 982, 1472, 1739, 1970
BseRI GAGGAG 1 cut(s) 27
BseSI GKGCMC 1 cut(s) 1489
BseX3I CGGCCG 1 cut(s) 42
BseXI GCAGC 5 cut(s) 818, 821, 1066, 1110, 1910
BsgI GTGCAG 1 cut(s) 416
Bsh1236I CGCG 1 cut(s) 193
Bsh1285I CGRYCG 1 cut(s) 45
BshFI GGCC 4 cut(s) 44, 114, 726, 913
BshTI ACCGGT 1 cut(s) 554
BsiEI CGRYCG 1 cut(s) 45
BsiHKCI CYCGRG 1 cut(s) 1570
BsiSI CCGG 3 cut(s) 555, 879, 1809
BslFI GGGAC 1 cut(s) 818
BslI CCNNNNNNNGG 1 cut(s) 645
BsmAI GTCTC 2 cut(s) 618, 1683
BsmFI GGGAC 1 cut(s) 818
BsmI GAATGC 2 cut(s) 799, 1105
BsnI GGCC 4 cut(s) 44, 114, 726, 913
Bso31I GGTCTC 1 cut(s) 618
BsoBI CYCGRG 1 cut(s) 1570
Bsp1286I GDGCHC 2 cut(s) 21, 1489
Bsp13I TCCGGA 1 cut(s) 1808
Bsp1407I TGTACA 1 cut(s) 1263
Bsp143I GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
BspACI CCGC 3 cut(s) 45, 1290, 1575
BspANI GGCC 4 cut(s) 44, 114, 726, 913
BspCNI CTCAG 4 cut(s) 733, 921, 1745, 1996
BspEI TCCGGA 1 cut(s) 1808
BspFNI CGCG 1 cut(s) 193
BspHI TCATGA 1 cut(s) 1027
BspLI GGNNCC 3 cut(s) 61, 637, 877
BspMI ACCTGC 2 cut(s) 113, 1219
BspPI GGATC 2 cut(s) 1472, 2002
BspTNI GGTCTC 1 cut(s) 618
BsrBI CCGCTC 1 cut(s) 1575
BsrDI GCAATG 2 cut(s) 1048, 1962
BsrFI RCCGGY 1 cut(s) 554
BsrGI TGTACA 1 cut(s) 1263
BsrI ACTGG 7 cut(s) 55, 614, 650, 982, 1472, 1739, 1970
BssAI RCCGGY 1 cut(s) 554
BssECI CCNNGG 5 cut(s) 109, 436, 468, 1107, 1557
BssMI GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
BssNAI GTATAC 1 cut(s) 1156
BssT1I CCWWGG 3 cut(s) 436, 1107, 1557
Bst1107I GTATAC 1 cut(s) 1156
Bst2UI CCWGG 5 cut(s) 111, 238, 470, 640, 1935
Bst4CI ACNGT 6 cut(s) 335, 409, 786, 1618, 1992, 2065
Bst6I CTCTTC 1 cut(s) 428
BstAUI TGTACA 1 cut(s) 1263
BstC8I GCNNGC 4 cut(s) 541, 1128, 1725, 1729
BstDEI CTNAG 8 cut(s) 95, 443, 617, 741, 908, 1393, 1732, 2004
BstF5I GGATG 4 cut(s) 478, 1353, 1878, 2081
BstFNI CGCG 1 cut(s) 193
BstH2I RGCGCY 1 cut(s) 959
BstHHI GCGC 3 cut(s) 149, 958, 1836
BstKTI GATC 6 cut(s) 478, 693, 1033, 1480, 2010, 2019
BstMAI GTCTC 2 cut(s) 618, 1683
BstMBI GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
BstMCI CGRYCG 1 cut(s) 45
BstMWI GCNNNNNNNGC 4 cut(s) 803, 964, 1493, 1865
BstNI CCWGG 5 cut(s) 111, 238, 470, 640, 1935
BstNSI RCATGY 3 cut(s) 833, 857, 1162
BstSCI CCNGG 5 cut(s) 109, 236, 468, 638, 1933
BstSFI CTRYAG 2 cut(s) 217, 1893
BstSLI GKGCMC 1 cut(s) 1489
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 5 cut(s) 818, 821, 1066, 1110, 1910
BstV2I GAAGAC 1 cut(s) 440
BstX2I RGATCY 2 cut(s) 1477, 2007
BstXI CCANNNNNNTGG 1 cut(s) 282
BstYI RGATCY 2 cut(s) 1477, 2007
BstZ17I GTATAC 1 cut(s) 1156
BstZI CGGCCG 1 cut(s) 42
BsuI GTATCC 2 cut(s) 998, 1023
BsuRI GGCC 4 cut(s) 44, 114, 726, 913
BtrI CACGTC 1 cut(s) 1094
BtsCI GGATG 4 cut(s) 478, 1353, 1878, 2081
BtsI GCAGTG 2 cut(s) 428, 836
BtsIMutI CAGTG 5 cut(s) 340, 428, 836, 1623, 1977
BveI ACCTGC 2 cut(s) 113, 1219
Cac8I GCNNGC 4 cut(s) 541, 1128, 1725, 1729
CaiI CAGNNNCTG 2 cut(s) 645, 1868
CciI TCATGA 1 cut(s) 1027
CfoI GCGC 3 cut(s) 149, 958, 1836
Cfr10I RCCGGY 1 cut(s) 554
Cfr13I GGNCC 2 cut(s) 362, 1658
CseI GACGC 3 cut(s) 545, 1433, 1848
Csp6I GTAC 4 cut(s) 405, 986, 1074, 1264
CspAI ACCGGT 1 cut(s) 554
CspCI CAANNNNNGTGG 2 cut(s) 924, 959
CviAII CATG 7 cut(s) 464, 830, 854, 1028, 1159, 1482, 2072
CviQI GTAC 4 cut(s) 405, 986, 1074, 1264
DdeI CTNAG 8 cut(s) 95, 443, 617, 741, 908, 1393, 1732, 2004
DpnI GATC 6 cut(s) 477, 692, 1032, 1479, 2009, 2018
DpnII GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
DraI TTTAAA 1 cut(s) 2031
DrdI GACNNNNNNGTC 1 cut(s) 1697
DriI GACNNNNNGTC 1 cut(s) 1675
DseDI GACNNNNNNGTC 1 cut(s) 1697
EaeI YGGCCR 2 cut(s) 42, 724
EagI CGGCCG 1 cut(s) 42
Eam1104I CTCTTC 1 cut(s) 428
Eam1105I GACNNNNNGTC 1 cut(s) 1675
EarI CTCTTC 1 cut(s) 428
EclXI CGGCCG 1 cut(s) 42
Eco130I CCWWGG 3 cut(s) 436, 1107, 1557
Eco147I AGGCCT 1 cut(s) 913
Eco24I GRGCYC 1 cut(s) 21
Eco31I GGTCTC 1 cut(s) 618
Eco32I GATATC 1 cut(s) 225
Eco47I GGWCC 2 cut(s) 362, 1658
Eco52I CGGCCG 1 cut(s) 42
Eco57I CTGAAG 1 cut(s) 651
Eco88I CYCGRG 1 cut(s) 1570
EcoRI GAATTC 1 cut(s) 1388
EcoRII CCWGG 5 cut(s) 109, 236, 468, 638, 1933
EcoRV GATATC 1 cut(s) 225
EcoT14I CCWWGG 3 cut(s) 436, 1107, 1557
EcoT22I ATGCAT 3 cut(s) 6, 928, 2081
EcoT38I GRGCYC 1 cut(s) 21
ErhI CCWWGG 3 cut(s) 436, 1107, 1557
FaeI CATG 7 cut(s) 467, 833, 857, 1031, 1162, 1485, 2075
FalI AAGNNNNNCTT 2 cut(s) 1376, 1408
FaqI GGGAC 1 cut(s) 818
FatI CATG 7 cut(s) 463, 829, 853, 1027, 1158, 1481, 2071
FauNDI CATATG 1 cut(s) 348
FbaI TGATCA 2 cut(s) 475, 690
FblI GTMKAC 1 cut(s) 1155
Fnu4HI GCNGC 7 cut(s) 45, 807, 810, 1080, 1124, 1290, 1899
FokI GGATG 4 cut(s) 485, 1340, 1865, 2088
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 7 cut(s) 45, 807, 810, 1080, 1124, 1290, 1899
FspBI CTAG 2 cut(s) 458, 1218
GlaI GCGC 3 cut(s) 148, 957, 1835
GluI GCNGC 7 cut(s) 45, 807, 810, 1080, 1124, 1290, 1899
GsuI CTGGAG 4 cut(s) 189, 259, 1956, 1997
HaeII RGCGCY 1 cut(s) 959
HaeIII GGCC 4 cut(s) 44, 114, 726, 913
HapII CCGG 3 cut(s) 555, 879, 1809
HgaI GACGC 3 cut(s) 545, 1433, 1848
HhaI GCGC 3 cut(s) 149, 958, 1836
Hin1II CATG 7 cut(s) 467, 833, 857, 1031, 1162, 1485, 2075
Hin6I GCGC 3 cut(s) 147, 956, 1834
HinP1I GCGC 3 cut(s) 147, 956, 1834
HincII GTYRAC 1 cut(s) 1446
HindII GTYRAC 1 cut(s) 1446
HindIII AAGCTT 2 cut(s) 541, 1494
HinfI GANTC 7 cut(s) 776, 1241, 1538, 1548, 1621, 1872, 2038
HpaII CCGG 3 cut(s) 555, 879, 1809
HphI GGTGA 4 cut(s) 118, 569, 877, 2011
Hpy166II GTNNAC 6 cut(s) 272, 868, 1156, 1266, 1446, 1995
Hpy188I TCNGA 8 cut(s) 102, 301, 331, 489, 535, 695, 1626, 2005
Hpy188III TCNNGA 8 cut(s) 136, 479, 1028, 1200, 1253, 1667, 1809, 2014
Hpy8I GTNNAC 6 cut(s) 272, 868, 1156, 1266, 1446, 1995
HpyCH4III ACNGT 6 cut(s) 335, 409, 786, 1618, 1992, 2065
HpyCH4IV ACGT 2 cut(s) 666, 1093
HpyF10VI GCNNNNNNNGC 4 cut(s) 803, 964, 1493, 1865
HpyF3I CTNAG 8 cut(s) 95, 443, 617, 741, 908, 1393, 1732, 2004
HpySE526I ACGT 2 cut(s) 666, 1093
Hsp92II CATG 7 cut(s) 467, 833, 857, 1031, 1162, 1485, 2075
HspAI GCGC 3 cut(s) 147, 956, 1834
Kpn2I TCCGGA 1 cut(s) 1808
Ksp22I TGATCA 2 cut(s) 475, 690
Kzo9I GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
LmnI GCTCC 7 cut(s) 459, 621, 761, 881, 1255, 1600, 1937
Lsp1109I GCAGC 5 cut(s) 818, 821, 1066, 1110, 1910
LweI GCATC 8 cut(s) 82, 687, 935, 954, 1059, 1151, 1939, 2066
MaeI CTAG 2 cut(s) 458, 1218
MaeII ACGT 2 cut(s) 666, 1093
MaeIII GTNAC 3 cut(s) 493, 667, 1942
MalI GATC 6 cut(s) 477, 692, 1032, 1479, 2009, 2018
MbiI CCGCTC 1 cut(s) 1575
MboI GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
MboII GAAGA 6 cut(s) 255, 415, 440, 1108, 1427, 1774
MfeI CAATTG 2 cut(s) 276, 1682
MflI RGATCY 2 cut(s) 1477, 2007
MhlI GDGCHC 2 cut(s) 21, 1489
MlsI TGGCCA 1 cut(s) 726
MluI ACGCGT 1 cut(s) 191
MluNI TGGCCA 1 cut(s) 726
MlyI GAGTC 3 cut(s) 785, 1250, 1532
MmeI TCCRAC 2 cut(s) 959, 1632
Mox20I TGGCCA 1 cut(s) 726
Mph1103I ATGCAT 3 cut(s) 6, 928, 2081
MroI TCCGGA 1 cut(s) 1808
MroXI GAANNNNTTC 3 cut(s) 58, 1388, 1816
MscI TGGCCA 1 cut(s) 726
Msp20I TGGCCA 1 cut(s) 726
MspI CCGG 3 cut(s) 555, 879, 1809
MspR9I CCNGG 5 cut(s) 111, 238, 470, 640, 1935
MunI CAATTG 2 cut(s) 276, 1682
Mva1269I GAATGC 2 cut(s) 799, 1105
MvaI CCWGG 5 cut(s) 111, 238, 470, 640, 1935
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 4 cut(s) 803, 964, 1493, 1865
NdeI CATATG 1 cut(s) 348
NdeII GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
NlaIII CATG 7 cut(s) 467, 833, 857, 1031, 1162, 1485, 2075
NlaIV GGNNCC 3 cut(s) 61, 637, 877
NmuCI GTSAC 2 cut(s) 667, 1942
NsiI ATGCAT 3 cut(s) 6, 928, 2081
NspI RCATGY 3 cut(s) 833, 857, 1162
PaeR7I CTCGAG 1 cut(s) 1570
PagI TCATGA 1 cut(s) 1027
PceI AGGCCT 1 cut(s) 913
PciI ACATGT 2 cut(s) 829, 853
PctI GAATGC 2 cut(s) 799, 1105
PdmI GAANNNNTTC 3 cut(s) 58, 1388, 1816
PfeI GAWTC 4 cut(s) 1548, 1621, 1872, 2038
PflMI CCANNNNNTGG 1 cut(s) 645
PinAI ACCGGT 1 cut(s) 554
PkrI GCNGC 7 cut(s) 46, 808, 811, 1081, 1125, 1291, 1900
PleI GAGTC 3 cut(s) 784, 1249, 1532
PpsI GAGTC 3 cut(s) 784, 1249, 1532
PscI ACATGT 2 cut(s) 829, 853
Psp6I CCWGG 5 cut(s) 109, 236, 468, 638, 1933
PspGI CCWGG 5 cut(s) 109, 236, 468, 638, 1933
PspN4I GGNNCC 3 cut(s) 61, 637, 877
PspPI GGNCC 2 cut(s) 362, 1658
PspXI VCTCGAGB 1 cut(s) 1570
PstNI CAGNNNCTG 2 cut(s) 645, 1868
PsuI RGATCY 2 cut(s) 1477, 2007
RsaI GTAC 4 cut(s) 406, 987, 1075, 1265
RsaNI GTAC 4 cut(s) 405, 986, 1074, 1264
SatI GCNGC 7 cut(s) 45, 807, 810, 1080, 1124, 1290, 1899
Sau3AI GATC 6 cut(s) 475, 690, 1030, 1477, 2007, 2016
Sau96I GGNCC 2 cut(s) 362, 1658
SchI GAGTC 3 cut(s) 785, 1250, 1532
ScrFI CCNGG 5 cut(s) 111, 238, 470, 640, 1935
SduI GDGCHC 2 cut(s) 21, 1489
SfaNI GCATC 8 cut(s) 82, 687, 935, 954, 1059, 1151, 1939, 2066
SfcI CTRYAG 2 cut(s) 217, 1893
Sfr274I CTCGAG 1 cut(s) 1570
SgrAI CRCCGGYG 1 cut(s) 554
SinI GGWCC 2 cut(s) 362, 1658
SlaI CTCGAG 1 cut(s) 1570
SmlI CTYRAG 4 cut(s) 959, 1491, 1570, 2091
SmoI CTYRAG 4 cut(s) 959, 1491, 1570, 2091
SseBI AGGCCT 1 cut(s) 913
SsiI CCGC 3 cut(s) 45, 1290, 1575
SspI AATATT 1 cut(s) 686
SspMI CTAG 2 cut(s) 458, 1218
StuI AGGCCT 1 cut(s) 913
StyD4I CCNGG 5 cut(s) 109, 236, 468, 638, 1933
StyI CCWWGG 3 cut(s) 436, 1107, 1557
TaaI ACNGT 6 cut(s) 335, 409, 786, 1618, 1992, 2065
TaiI ACGT 2 cut(s) 669, 1096
TaqI TCGA 3 cut(s) 135, 1020, 1571
TatI WGTACW 1 cut(s) 1263
TauI GCSGC 2 cut(s) 47, 1292
TfiI GAWTC 4 cut(s) 1548, 1621, 1872, 2038
TscAI CASTG 5 cut(s) 340, 435, 843, 1623, 1977
TseFI GTSAC 2 cut(s) 667, 1942
TseI GCWGC 5 cut(s) 806, 809, 1079, 1123, 1898
Tsp45I GTSAC 2 cut(s) 667, 1942
TspDTI ATGAA 6 cut(s) 25, 222, 452, 535, 1016, 2105
TspGWI ACGGA 4 cut(s) 559, 1005, 1313, 1936
TspRI CASTG 5 cut(s) 340, 435, 843, 1623, 1977
Van91I CCANNNNNTGG 1 cut(s) 645
VpaK11BI GGWCC 2 cut(s) 362, 1658
XapI RAATTY 2 cut(s) 519, 1388
XceI RCATGY 3 cut(s) 833, 857, 1162
XhoI CTCGAG 1 cut(s) 1570
XmiI GTMKAC 1 cut(s) 1155
XmnI GAANNNNTTC 3 cut(s) 58, 1388, 1816
XspI CTAG 2 cut(s) 458, 1218
Zsp2I ATGCAT 3 cut(s) 6, 928, 2081
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.