Rmu_sc0003040.1_g000018

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003040.1
OG0000083
Physical Location & Seq
Reverse (-)
70222 .. 74338
4117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003040.1_g000018.1.cds

Sequence Viewer

Length: 2205 bp
atggggcttgtgttcaagcatctcctttatgcagtgctctgttttgctcttacgcatgatctggttcatgcccaagataaacaatcaggcttcatcagcttggactgtggactgccatcagattcttcctactctgagccaaccacaagtattaactacatttcagatgcacccttcatcgacaccggtgtaagtagaaccatagaggctaaatataaagccaaccgtcaactgcaatatgctcgtgtccggagctttcctcaggggatcaggaattgttacaaagtaaacatcacaagtggtgctaaatacttgattagagctacttttttatatgggaattatgatgggctaaataaattgcccaagtttgatctgcacctgggacctaacttctgggattcagtgacactcacctctgcattctatatcaccttcaaagaactcattcacactccttcattaaaccacatacacgtgtgtttgctgaacaaggactccggaacaccattcatttcagcattggaatttaggcttttgacgaactctacttatgtgaccatctcaggttcattggcactcgcctggcgcttagatgctgcatcaacaatcaatagatcatacaggtatgacgacgatgtttttgatcgcctctggagccgttacaactctgatgattggacaaagataaatacctcgcgtaccgtagcgggcggtaattaccaagtaccaactatagtaatgaatacagccagcactccaaaaaatgctaattcttccctacatatctcctgggagcctccagataacactactcaatattatatctacatgcattttgctgagctgcaacagcttaaagccaatcagttcagagcattcaatatcaatctgaatgggcagtattggtatggacctattgttccaccaaatttttccacatacactgtgtatacccaatcagccttgacacctgcagcaaataatagattttcaatcctcaagactgagaattcaactctaccacctatcattaatgccatcgaattctacacattgaaagacttctcacaattagaaactgatcaagacgatgtggttgcgatcacgaacataaagtcaacatacggagtgaagaagaattgggaaggagacccatgtgctccacaagaatacatttgggaaggtctcaactgtagctctaatggttttgatccccccagaatcacatcattgaacctctcttcaagtggactaattggggagataacttcatatatatctaatcttgtcccactacaatctttggatttgtcaaacaatagcttaactggttcaataccggagttcctgtctaaattgccaaacctgaaagttcttaacctggaaaagaacatgctcaatggtttagttccagctgaacttgttgaaagatcaagaagcggcagactaactttaagaaacttgactagtctagttggatattgccatgaacgaaccaccatggctctcatctacgaatacatggtcaatggaaatttggaatcacatcttttaggtgatgacagcaatgcgaatgtcttgagttgggaaggtagaatgcaaattgcaatggatgcatcacaaggattggagtatctgcacaatggttgtaggccacctattgtccacagggatgtgaaaacaacaaatattttgttagctgaaaatttccaggcaaaattggctgattttggcctatctagagttttcccaactgatggaggcactcatatgtccacagctgttgtcggcacgcctggataccttgatcctgagtaccacataaccggcaggctgaacgagaaaagtgatgtttatagctttggagttgctctcttgcaaataatcactagccgtcctgtgatatcaagagctgctcatgaaaatactcttgtaggtcaatgggtgagctccatgcttcgtataggggatgttaaaagtattgtggatccgaggttatgcggagatttcaaagttaactctgcttggaaggctgttgaactagcaatggattgtacatctgaaacatctactgagaggccaaacatgagtgaggtagtgacgagactaaaggaatgcttggctgcagctcgtaagaatgagagccatttgattgattactctattaatgtaactactacactcaatccctcggcaaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

734

Amino Acids

82.02

Weight (kDa)

6.2

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 982
Acc36I ACCTGC 1 cut(s) 982
AccB7I CCANNNNNTGG 1 cut(s) 1760
AccI GTMKAC 1 cut(s) 953
AccII CGCG 1 cut(s) 700
AccIII TCCGGA 2 cut(s) 249, 500
AciI CCGC 4 cut(s) 710, 714, 1443, 2004
AclWI GGATC 5 cut(s) 275, 1208, 1805, 1985, 1998
AcsI RAATTY 6 cut(s) 527, 931, 1012, 1046, 1537, 1708
AcvI CACGTG 1 cut(s) 478
AfaI GTAC 4 cut(s) 703, 729, 1820, 2059
AfiI CCNNNNNNNGG 2 cut(s) 1760, 2199
AflIII ACRYGT 2 cut(s) 475, 477
AgeI ACCGGT 1 cut(s) 185
AhlI ACTAGT 1 cut(s) 1469
AjnI CCWGG 6 cut(s) 381, 584, 791, 1383, 1713, 1798
AloI GAACNNNNNNTCC 4 cut(s) 482, 514, 906, 938
Alw21I GWGCWC 3 cut(s) 39, 1165, 1955
Alw26I GTCTC 3 cut(s) 1146, 1193, 2101
AlwI GGATC 5 cut(s) 275, 1208, 1805, 1985, 1998
Aor13HI TCCGGA 2 cut(s) 249, 500
AoxI GGCC 3 cut(s) 1655, 1735, 2081
ApeKI GCWGC 6 cut(s) 599, 847, 977, 1916, 2126, 2129
ApoI RAATTY 6 cut(s) 527, 931, 1012, 1046, 1537, 1708
ArsI GACNNNNNNTTYG 6 cut(s) 626, 658, 1103, 1135, 1512, 1544
AseI ATTAAT 2 cut(s) 1035, 2169
AsiGI ACCGGT 1 cut(s) 185
Asp700I GAANNNNTTC 2 cut(s) 447, 1064
AspLEI GCGC 1 cut(s) 591
AspS9I GGNCC 2 cut(s) 386, 914
AsuHPI GGTGA 4 cut(s) 406, 424, 1571, 1960
AvaII GGWCC 2 cut(s) 386, 914
AxyI CCTNAGG 1 cut(s) 261
BamHI GGATCC 1 cut(s) 1990
BanII GRGCYC 1 cut(s) 1955
BauI CACGAG 1 cut(s) 243
BbrPI CACGTG 1 cut(s) 478
Bbv12I GWGCWC 3 cut(s) 39, 1165, 1955
BbvI GCAGC 6 cut(s) 586, 834, 989, 1903, 2113, 2141
BccI CCATC 5 cut(s) 124, 341, 569, 1049, 1754
BceAI ACGGC 2 cut(s) 645, 1881
BcgI CGANNNNNNTGC 4 cut(s) 224, 258, 1082, 1116
BciT130I CCWGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
BciVI GTATCC 1 cut(s) 1796
BclI TGATCA 1 cut(s) 1084
BcoDI GTCTC 3 cut(s) 1146, 1193, 2101
BcuI ACTAGT 1 cut(s) 1469
BfaI CTAG 5 cut(s) 1470, 1475, 1743, 1893, 2045
BfmI CTRYAG 4 cut(s) 735, 975, 1195, 2127
BfoI RGCGCY 1 cut(s) 592
BfuAI ACCTGC 1 cut(s) 982
BfuI GTATCC 1 cut(s) 1796
BisI GCNGC 7 cut(s) 600, 848, 978, 1444, 1917, 2127, 2130
BlpI GCTNAGC 1 cut(s) 843
BlsI GCNGC 7 cut(s) 601, 849, 979, 1445, 1918, 2128, 2131
Bme1390I CCNGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
Bme18I GGWCC 2 cut(s) 386, 914
BmgT120I GGNCC 2 cut(s) 386, 914
BmiI GGNNCC 4 cut(s) 387, 659, 798, 1992
BmrFI CCNGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
BmsI GCATC 6 cut(s) 28, 157, 586, 611, 1606, 1628
BplI GAGNNNNNCTC 4 cut(s) 244, 276, 1860, 1892
BpmI CTGGAG 2 cut(s) 676, 786
Bpu1102I GCTNAGC 1 cut(s) 843
BpuEI CTTGAG 2 cut(s) 986, 1603
BsaAI YACGTR 1 cut(s) 478
BsaI GGTCTC 2 cut(s) 1146, 1193
BsaJI CCNNGG 5 cut(s) 382, 792, 1503, 1994, 2193
BsaWI WCCGGW 4 cut(s) 185, 249, 500, 1342
BsaXI ACNNNNNCTCC 4 cut(s) 482, 512, 1337, 1367
Bsc4I CCNNNNNNNGG 2 cut(s) 1760, 2199
Bse118I RCCGGY 2 cut(s) 185, 1829
Bse1I ACTGG 1 cut(s) 1336
Bse21I CCTNAGG 1 cut(s) 261
Bse3DI GCAATG 3 cut(s) 1576, 1617, 2055
BseAI TCCGGA 2 cut(s) 249, 500
BseBI CCWGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
BseDI CCNNGG 5 cut(s) 382, 792, 1503, 1994, 2193
BseGI GGATG 3 cut(s) 1621, 1681, 1978
BseLI CCNNNNNNNGG 2 cut(s) 1760, 2199
BseMI GCAATG 3 cut(s) 1576, 1617, 2055
BseMII CTCAG 7 cut(s) 126, 275, 579, 834, 999, 1806, 2067
BseNI ACTGG 1 cut(s) 1336
BseXI GCAGC 6 cut(s) 586, 834, 989, 1903, 2113, 2141
BsgI GTGCAG 2 cut(s) 362, 1625
Bsh1236I CGCG 1 cut(s) 700
BshFI GGCC 3 cut(s) 1657, 1737, 2083
BshTI ACCGGT 1 cut(s) 185
BsiHKAI GWGCWC 3 cut(s) 39, 1165, 1955
BsiSI CCGG 5 cut(s) 186, 250, 501, 1343, 1830
BslFI GGGAC 2 cut(s) 399, 1277
BslI CCNNNNNNNGG 2 cut(s) 1760, 2199
BsmAI GTCTC 3 cut(s) 1146, 1193, 2101
BsmFI GGGAC 2 cut(s) 399, 1277
BsmI GAATGC 4 cut(s) 422, 878, 1605, 2123
BsnI GGCC 3 cut(s) 1657, 1737, 2083
Bso31I GGTCTC 2 cut(s) 1146, 1193
Bsp1286I GDGCHC 3 cut(s) 39, 1165, 1955
Bsp13I TCCGGA 2 cut(s) 249, 500
Bsp1407I TGTACA 1 cut(s) 2057
Bsp1720I GCTNAGC 1 cut(s) 843
Bsp19I CCATGG 1 cut(s) 1503
BspACI CCGC 4 cut(s) 710, 714, 1443, 2004
BspANI GGCC 3 cut(s) 1657, 1737, 2083
BspCNI CTCAG 7 cut(s) 127, 274, 578, 835, 1000, 1807, 2068
BspEI TCCGGA 2 cut(s) 249, 500
BspFNI CGCG 1 cut(s) 700
BspHI TCATGA 1 cut(s) 1921
BspLI GGNNCC 4 cut(s) 387, 659, 798, 1992
BspMAI CTGCAG 2 cut(s) 979, 2131
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 5 cut(s) 275, 1208, 1805, 1985, 1998
BspTNI GGTCTC 2 cut(s) 1146, 1193
BsrDI GCAATG 3 cut(s) 1576, 1617, 2055
BsrFI RCCGGY 2 cut(s) 185, 1829
BsrGI TGTACA 1 cut(s) 2057
BsrI ACTGG 1 cut(s) 1336
BssAI RCCGGY 2 cut(s) 185, 1829
BssECI CCNNGG 5 cut(s) 382, 792, 1503, 1994, 2193
BssNAI GTATAC 1 cut(s) 954
BssSI CACGAG 1 cut(s) 243
BssT1I CCWWGG 1 cut(s) 1503
Bst1107I GTATAC 1 cut(s) 954
Bst2BI CACGAG 1 cut(s) 243
Bst2UI CCWGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
Bst4CI ACNGT 5 cut(s) 107, 227, 706, 949, 1196
Bst6I CTCTTC 1 cut(s) 1249
BstAPI GCANNNNNTGC 1 cut(s) 1616
BstAUI TGTACA 1 cut(s) 2057
BstBAI YACGTR 1 cut(s) 478
BstC8I GCNNGC 4 cut(s) 712, 754, 1796, 1835
BstDEI CTNAG 8 cut(s) 135, 261, 565, 592, 843, 1008, 1815, 2076
BstDSI CCRYGG 1 cut(s) 1503
BstENI CCTNNNNNAGG 1 cut(s) 2197
BstF5I GGATG 3 cut(s) 1621, 1681, 1978
BstFNI CGCG 1 cut(s) 700
BstH2I RGCGCY 1 cut(s) 592
BstHHI GCGC 1 cut(s) 591
BstMAI GTCTC 3 cut(s) 1146, 1193, 2101
BstMWI GCNNNNNNNGC 6 cut(s) 96, 657, 853, 1616, 1724, 2033
BstNI CCWGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
BstNSI RCATGY 2 cut(s) 835, 1399
BstSCI CCNGG 6 cut(s) 381, 584, 791, 1383, 1713, 1798
BstSFI CTRYAG 4 cut(s) 735, 975, 1195, 2127
BstUI CGCG 1 cut(s) 700
BstV1I GCAGC 6 cut(s) 586, 834, 989, 1903, 2113, 2141
BstX2I RGATCY 1 cut(s) 1990
BstYI RGATCY 1 cut(s) 1990
BstZ17I GTATAC 1 cut(s) 954
Bsu36I CCTNAGG 1 cut(s) 261
BsuI GTATCC 1 cut(s) 1796
BsuRI GGCC 3 cut(s) 1657, 1737, 2083
BtgI CCRYGG 1 cut(s) 1503
BtsCI GGATG 3 cut(s) 1621, 1681, 1978
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 39, 411, 945
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 4 cut(s) 712, 754, 1796, 1835
CciI TCATGA 1 cut(s) 1921
CfoI GCGC 1 cut(s) 591
Cfr10I RCCGGY 2 cut(s) 185, 1829
Cfr13I GGNCC 2 cut(s) 386, 914
Csp6I GTAC 4 cut(s) 702, 728, 1819, 2058
CspAI ACCGGT 1 cut(s) 185
CspCI CAANNNNNGTGG 2 cut(s) 1768, 1803
CviQI GTAC 4 cut(s) 702, 728, 1819, 2058
DdeI CTNAG 8 cut(s) 135, 261, 565, 592, 843, 1008, 1815, 2076
Eam1104I CTCTTC 1 cut(s) 1249
EarI CTCTTC 1 cut(s) 1249
Ecl136II GAGCTC 1 cut(s) 1953
Eco130I CCWWGG 1 cut(s) 1503
Eco24I GRGCYC 1 cut(s) 1955
Eco31I GGTCTC 2 cut(s) 1146, 1193
Eco32I GATATC 1 cut(s) 1908
Eco47I GGWCC 2 cut(s) 386, 914
Eco53kI GAGCTC 1 cut(s) 1953
Eco72I CACGTG 1 cut(s) 478
Eco81I CCTNAGG 1 cut(s) 261
EcoICRI GAGCTC 1 cut(s) 1953
EcoNI CCTNNNNNAGG 1 cut(s) 2197
EcoO109I RGGNCCY 1 cut(s) 386
EcoRI GAATTC 2 cut(s) 1012, 1046
EcoRII CCWGG 6 cut(s) 381, 584, 791, 1383, 1713, 1798
EcoRV GATATC 1 cut(s) 1908
EcoT14I CCWWGG 1 cut(s) 1503
EcoT22I ATGCAT 2 cut(s) 837, 1621
EcoT38I GRGCYC 1 cut(s) 1955
ErhI CCWWGG 1 cut(s) 1503
FalI AAGNNNNNCTT 2 cut(s) 2105, 2137
FaqI GGGAC 2 cut(s) 399, 1277
FauI CCCGC 1 cut(s) 703
FauNDI CATATG 1 cut(s) 1773
FbaI TGATCA 1 cut(s) 1084
FblI GTMKAC 1 cut(s) 953
Fnu4HI GCNGC 7 cut(s) 600, 848, 978, 1444, 1917, 2127, 2130
FokI GGATG 3 cut(s) 1628, 1688, 1985
FriOI GRGCYC 1 cut(s) 1955
Fsp4HI GCNGC 7 cut(s) 600, 848, 978, 1444, 1917, 2127, 2130
FspBI CTAG 5 cut(s) 1470, 1475, 1743, 1893, 2045
GlaI GCGC 1 cut(s) 590
GluI GCNGC 7 cut(s) 600, 848, 978, 1444, 1917, 2127, 2130
GsuI CTGGAG 2 cut(s) 676, 786
HaeII RGCGCY 1 cut(s) 592
HaeIII GGCC 3 cut(s) 1657, 1737, 2083
HapII CCGG 5 cut(s) 186, 250, 501, 1343, 1830
HhaI GCGC 1 cut(s) 591
Hin6I GCGC 1 cut(s) 589
HinP1I GCGC 1 cut(s) 589
HincII GTYRAC 3 cut(s) 230, 1122, 2020
HindII GTYRAC 3 cut(s) 230, 1122, 2020
HinfI GANTC 5 cut(s) 122, 401, 497, 1224, 1544
HpaI GTTAAC 1 cut(s) 2020
HpaII CCGG 5 cut(s) 186, 250, 501, 1343, 1830
HphI GGTGA 4 cut(s) 406, 424, 1571, 1960
Hpy166II GTNNAC 9 cut(s) 110, 230, 289, 954, 1122, 1253, 1669, 1779, 2020
Hpy188I TCNGA 8 cut(s) 121, 136, 166, 673, 875, 894, 1995, 2065
Hpy8I GTNNAC 9 cut(s) 110, 230, 289, 954, 1122, 1253, 1669, 1779, 2020
Hpy99I CGWCG 1 cut(s) 638
HpyAV CCTTC 7 cut(s) 184, 445, 468, 1142, 1178, 1586, 2026
HpyCH4III ACNGT 5 cut(s) 107, 227, 706, 949, 1196
HpyCH4IV ACGT 1 cut(s) 477
HpyF10VI GCNNNNNNNGC 6 cut(s) 96, 657, 853, 1616, 1724, 2033
HpyF3I CTNAG 8 cut(s) 135, 261, 565, 592, 843, 1008, 1815, 2076
HpySE526I ACGT 1 cut(s) 477
HspAI GCGC 1 cut(s) 589
Kpn2I TCCGGA 2 cut(s) 249, 500
Ksp22I TGATCA 1 cut(s) 1084
KspAI GTTAAC 1 cut(s) 2020
LmnI GCTCC 5 cut(s) 252, 657, 796, 1168, 1958
Lsp1109I GCAGC 6 cut(s) 586, 834, 989, 1903, 2113, 2141
LweI GCATC 6 cut(s) 28, 157, 586, 611, 1606, 1628
MaeI CTAG 5 cut(s) 1470, 1475, 1743, 1893, 2045
MaeII ACGT 1 cut(s) 477
MaeIII GTNAC 6 cut(s) 278, 406, 556, 662, 2101, 2173
MboII GAAGA 5 cut(s) 117, 768, 1147, 1150, 1236
MflI RGATCY 1 cut(s) 1990
MhlI GDGCHC 3 cut(s) 39, 1165, 1955
MlyI GAGTC 1 cut(s) 491
MmeI TCCRAC 1 cut(s) 1459
Mph1103I ATGCAT 2 cut(s) 837, 1621
MroI TCCGGA 2 cut(s) 249, 500
MroXI GAANNNNTTC 2 cut(s) 447, 1064
MslI CAYNNNNRTG 3 cut(s) 476, 1674, 1772
MspA1I CMGCKG 2 cut(s) 1418, 1784
MspI CCGG 5 cut(s) 186, 250, 501, 1343, 1830
MspR9I CCNGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
Mva1269I GAATGC 4 cut(s) 422, 878, 1605, 2123
MvaI CCWGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
MvnI CGCG 1 cut(s) 700
MwoI GCNNNNNNNGC 6 cut(s) 96, 657, 853, 1616, 1724, 2033
NcoI CCATGG 1 cut(s) 1503
NdeI CATATG 1 cut(s) 1773
NlaIV GGNNCC 4 cut(s) 387, 659, 798, 1992
NmeAIII GCCGAG 1 cut(s) 2174
NmuCI GTSAC 3 cut(s) 406, 556, 2101
NsiI ATGCAT 2 cut(s) 837, 1621
NspI RCATGY 2 cut(s) 835, 1399
PagI TCATGA 1 cut(s) 1921
PaqCI CACCTGC 1 cut(s) 982
PctI GAATGC 4 cut(s) 422, 878, 1605, 2123
PdmI GAANNNNTTC 2 cut(s) 447, 1064
PfeI GAWTC 4 cut(s) 122, 401, 1224, 1544
PflMI CCANNNNNTGG 1 cut(s) 1760
PinAI ACCGGT 1 cut(s) 185
PkrI GCNGC 7 cut(s) 601, 849, 979, 1445, 1918, 2128, 2131
PleI GAGTC 1 cut(s) 491
PmaCI CACGTG 1 cut(s) 478
PmlI CACGTG 1 cut(s) 478
PpsI GAGTC 1 cut(s) 491
Ppu21I YACGTR 1 cut(s) 478
PpuMI RGGWCCY 1 cut(s) 386
PshBI ATTAAT 2 cut(s) 1035, 2169
Psp124BI GAGCTC 1 cut(s) 1955
Psp5II RGGWCCY 1 cut(s) 386
Psp6I CCWGG 6 cut(s) 381, 584, 791, 1383, 1713, 1798
PspCI CACGTG 1 cut(s) 478
PspGI CCWGG 6 cut(s) 381, 584, 791, 1383, 1713, 1798
PspN4I GGNNCC 4 cut(s) 387, 659, 798, 1992
PspPI GGNCC 2 cut(s) 386, 914
PspPPI RGGWCCY 1 cut(s) 386
PstI CTGCAG 2 cut(s) 979, 2131
PsuI RGATCY 1 cut(s) 1990
PvuII CAGCTG 2 cut(s) 1418, 1784
RsaI GTAC 4 cut(s) 703, 729, 1820, 2059
RsaNI GTAC 4 cut(s) 702, 728, 1819, 2058
RseI CAYNNNNRTG 3 cut(s) 476, 1674, 1772
SacI GAGCTC 1 cut(s) 1955
SatI GCNGC 7 cut(s) 600, 848, 978, 1444, 1917, 2127, 2130
Sau96I GGNCC 2 cut(s) 386, 914
SchI GAGTC 1 cut(s) 491
ScrFI CCNGG 6 cut(s) 383, 586, 793, 1385, 1715, 1800
SduI GDGCHC 3 cut(s) 39, 1165, 1955
SfaNI GCATC 6 cut(s) 28, 157, 586, 611, 1606, 1628
SfcI CTRYAG 4 cut(s) 735, 975, 1195, 2127
SgrAI CRCCGGYG 1 cut(s) 185
SinI GGWCC 2 cut(s) 386, 914
SmiMI CAYNNNNRTG 3 cut(s) 476, 1674, 1772
SmlI CTYRAG 2 cut(s) 1001, 1582
SmoI CTYRAG 2 cut(s) 1001, 1582
SpeI ACTAGT 1 cut(s) 1469
SsiI CCGC 4 cut(s) 710, 714, 1443, 2004
SspI AATATT 2 cut(s) 821, 1693
SspMI CTAG 5 cut(s) 1470, 1475, 1743, 1893, 2045
SstI GAGCTC 1 cut(s) 1955
StyD4I CCNGG 6 cut(s) 381, 584, 791, 1383, 1713, 1798
StyI CCWWGG 1 cut(s) 1503
TaaI ACNGT 5 cut(s) 107, 227, 706, 949, 1196
TaiI ACGT 1 cut(s) 480
TaqI TCGA 2 cut(s) 180, 1044
TatI WGTACW 1 cut(s) 2057
TauI GCSGC 1 cut(s) 1446
TfiI GAWTC 4 cut(s) 122, 401, 1224, 1544
TscAI CASTG 3 cut(s) 39, 411, 952
TseFI GTSAC 3 cut(s) 406, 556, 2101
TseI GCWGC 6 cut(s) 599, 847, 977, 1916, 2126, 2129
Tsp45I GTSAC 3 cut(s) 406, 556, 2101
TspGWI ACGGA 1 cut(s) 1143
TspRI CASTG 3 cut(s) 39, 411, 952
Van91I CCANNNNNTGG 1 cut(s) 1760
VpaK11BI GGWCC 2 cut(s) 386, 914
VspI ATTAAT 2 cut(s) 1035, 2169
XagI CCTNNNNNAGG 1 cut(s) 2197
XapI RAATTY 6 cut(s) 527, 931, 1012, 1046, 1537, 1708
XbaI TCTAGA 1 cut(s) 1742
XceI RCATGY 2 cut(s) 835, 1399
XmiI GTMKAC 1 cut(s) 953
XmnI GAANNNNTTC 2 cut(s) 447, 1064
XspI CTAG 5 cut(s) 1470, 1475, 1743, 1893, 2045
Zsp2I ATGCAT 2 cut(s) 837, 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.