RchiOBHm_Chr2g0141181

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000083
Physical Location & Seq
Reverse (-)
58739981 .. 58744330
4350 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51151

Sequence Viewer

Length: 2409 bp
ATGCTCTTAGTTCATGCGCAGGATCAAACAGGCTTCATCAGCATAGATTGCGGCCTTGCGGAGAATTCCACCTATTCTGAAAAGAAAACAACCATCGACTACATTTCAGATGCAACCTTCATAGACACTGGTGAAAGAAAGTTGGTATTGCCTGAAAACAGAAACGGCTACCAACAGCCTTACTGGTCTCTTAGGAGTTTTCCTCAAGGAACCAGGAACTGCTACAAAATAAATGTTAAAAGTGGCACCAGATACTTGATCAGAGCCAGTTTCTTTTATGGGAACTATGATGGAGAAAACAAATTGCCAGAGTTTGAACTACATCTTGGACCTAATTTGTGGGACTCGGTCAGTCTGGAAGATGCATTCAGTATCACAAACAAGGAGCTCATACATTATGTCCCAGCTAAGAGAAACTATCTACATATTTGTGTTGTGGAAAAGGCTCCGGGGTATCCATTCGATATGCATGATCGATTCTGGTACAGTCATAGCCGAGAAGATTGGACACAATTAAGTACCGCATCGACCATTGACCTCAATCAAAACGACTTTTACCAGCCAGCATCTGATGTTATGCGTACTGCTGCCACGCCGAAACTTGCAACTGATGACTTGAGTTTCTTCTGGCTGCCTGCTTATAAAAATGCAGAATATTATGTTTACATGCACTTTGCAGAAATTGAAGAACTCTCAGCTAACCAGTCTAGACAGCTTGAAATTACCATGAACGGAGAACTGTTTTATGGACCATTTGCTCCTGGTTACTTGAAGACATTTACTGTTTGGAGCACTAAGGCAATGAGTGGAGGACAATACAACTTTTCAGTCATAAAGGGAGCTGGCAACTCTGACCTTCAACCTATCCTTAATGCCATCGAGATTTATACAGTAAAAGAATTCTCAGAACAAGAAACAAACCAAGATGATGTTAACGCAATCACAAATATCAAAGTAGCATATAAAATTGAGAAGAATTGGCAAGGAGATCCATGTTTCCCAAAGAATTACTCATGGAAAGGTCTCAACTGTAGCTATTCTCCAAATGATTCACCGAGAATCATATACTTGGACTTGTCATCGAGTGGATTAACAGGGGAAATAGATGCTTCTATATCCAATCTCGCAATGATACAGACTTTGGACTTATCTAACAACAACTTAACAGGACCAATTCCGGACTTCTTGTCTCAAATGTCAAATTTAAATGTCATAAACTTGGAGAACAACAAGCTCACAGGCTCAGTTCCAAATGAACTTACTGAAAGAGCAAAAAATGGTTTACTATCATTAAGTTTGTGCGACAATCCAAATCTATCTGGAAATGTTTCTTGCAAAAAAAAGAAGAAGCAGAGTTTCGTTATTCCCATAATAGGGTCAATCATCGGAATTTCAATCCTCTTATCAATTGTAGCAATTATCTTCTGGCGCCTGAAAAGGAAAAGACAGAATGGGGCACAACCCCGCAGTGGGTCAGTGGAACTTGAGCCAACACAACGACAGTTCACATACTCAGAGATCCTCAAGATCACTAACAATAGACAAAGGATTCTTGGAAAAGGTGGATTTGGAACTGTTTATCATGGCTACATAGATGACAATACTCAAGTTAATCTTCTTATGAGGGTTCATCATACAAATTTGACTAGCCTTGTCGGATATTGTGATGATGAAAACAAAAAAGGACTCGTTTATGAGTACATGGCCAGGGGAAACTTACAAGAATATCTTTCAGATAAGAGTTCAAATGTCTTGACTTGGGACGGTAGACTTCAAGTAGCAACAGACGCTGCACAAGGATTGGAGTATCTACACTATGGTTGTAAACCTCCTATGATCCATAGGGATGTGAAAACAACAAACATCTTGCTATCAGAAAATTTCCAAGCCAAACTCTCTGATTTCGGCCTCTCTAGAAATTTCCCTGCAGGCGATGGAACTCATATAGTTACAGGTGTTGCTGGAACCCCTGGCTACCTAGCACCCGAGTATAAACAACTAAATAGGTTCAATGAGAAGAGTGACGTCTATAGCTTTGGGATTGTACTGCTGGAGATTATCACAGGTAGACCTGCTGTTTCGAGGACACGAGAGAGAATTGCCATCAATGAATGGGTTGGATCAATCATTCCAAAAGGAGACATTGACACCATTGTGGATCAGAGGTTAAAAGGAATATTCAATGTCAGCTCTGCCTGGAAAGTAGTGGAAATAGCAATGGCATGTGTCTCTCCAGAGACCAATAAAAGGCCAACCATGAGTAGAGTTGTTGGAGAACTGAAGCAGTGTCTGGAAACACAACTGTCTCAAAGAAACCAGGACAGCTATGAAACTGAACTAGGGAATTCCTTTCAGATTGTGTCTCATAACGGTTATTCAATCACTATGCTACGTCCCTCAGTTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

802

Amino Acids

90.45

Weight (kDa)

6.22

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 15 - 154 2.8e-48 Malectin-like domain
Malectin_like PF12819 152 - 298 1.9e-36 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 536 - 760 4.9e-37 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 537 - 757 6.9e-33 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 642
AatII GACGTC 1 cut(s) 2028
Acc16I TGCGCA 1 cut(s) 18
Acc36I ACCTGC 1 cut(s) 2080
AccB1I GGYRCC 2 cut(s) 245, 1428
AccI GTMKAC 2 cut(s) 1768, 2068
AccIII TCCGGA 1 cut(s) 1177
AciI CCGC 4 cut(s) 51, 59, 522, 1465
AclWI GGATC 6 cut(s) 30, 983, 1513, 1831, 2128, 2166
AcoI YGGCCR 1 cut(s) 1704
AcsI RAATTY 8 cut(s) 64, 899, 1201, 1389, 1639, 1879, 1918, 2344
AcuI CTGAAG 1 cut(s) 2300
AcyI GRCGYC 2 cut(s) 1429, 2025
AfaI GTAC 5 cut(s) 485, 520, 583, 1700, 2046
AfiI CCNNNNNNNGG 5 cut(s) 1373, 1374, 1469, 1470, 2247
AhdI GACNNNNNGTC 1 cut(s) 1186
AjnI CCWGG 6 cut(s) 212, 760, 1706, 1969, 2195, 2316
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
AleI CACNNNNGTG 1 cut(s) 2153
Alw21I GWGCWC 2 cut(s) 390, 794
Alw26I GTCTC 8 cut(s) 192, 1028, 1194, 2133, 2231, 2233, 2310, 2367
AlwI GGATC 6 cut(s) 30, 983, 1513, 1831, 2128, 2166
AlwNI CAGNNNCTG 4 cut(s) 219, 569, 1790, 2290
Ama87I CYCGRG 1 cut(s) 1985
Aor13HI TCCGGA 1 cut(s) 1177
AoxI GGCC 4 cut(s) 52, 1704, 1906, 2249
ApeKI GCWGC 3 cut(s) 587, 631, 1790
ApoI RAATTY 8 cut(s) 64, 899, 1201, 1389, 1639, 1879, 1918, 2344
Asp700I GAANNNNTTC 1 cut(s) 1327
AspLEI GCGC 2 cut(s) 19, 1431
AspS9I GGNCC 3 cut(s) 329, 749, 1169
AsuC2I CCSGG 1 cut(s) 450
AsuHPI GGTGA 2 cut(s) 143, 1044
AvaI CYCGRG 1 cut(s) 1985
AvaII GGWCC 3 cut(s) 329, 749, 1169
BaeGI GKGCMC 1 cut(s) 1459
BalI TGGCCA 1 cut(s) 1706
BanI GGYRCC 2 cut(s) 245, 1428
BanII GRGCYC 1 cut(s) 390
BauI CACGAG 1 cut(s) 2088
BbsI GAAGAC 1 cut(s) 779
Bbv12I GWGCWC 2 cut(s) 390, 794
BbvI GCAGC 3 cut(s) 574, 618, 1777
BccI CCATC 5 cut(s) 101, 284, 884, 1928, 2111
BceAI ACGGC 1 cut(s) 181
BciT130I CCWGG 6 cut(s) 214, 762, 1708, 1971, 2197, 2318
BciVI GTATCC 1 cut(s) 465
BclI TGATCA 1 cut(s) 258
BcnI CCSGG 1 cut(s) 450
BcoDI GTCTC 8 cut(s) 192, 1028, 1194, 2133, 2231, 2233, 2310, 2367
BfaI CTAG 5 cut(s) 708, 1647, 1914, 1979, 2339
BfmI CTRYAG 3 cut(s) 1030, 1926, 2029
BfoI RGCGCY 1 cut(s) 1432
BfuAI ACCTGC 1 cut(s) 2080
BfuI GTATCC 1 cut(s) 465
BisI GCNGC 4 cut(s) 52, 588, 632, 1791
BlsI GCNGC 4 cut(s) 53, 589, 633, 1792
Bme1390I CCNGG 7 cut(s) 214, 450, 762, 1708, 1971, 2197, 2318
Bme18I GGWCC 3 cut(s) 329, 749, 1169
BmeRI GACNNNNNGTC 1 cut(s) 1186
BmeT110I CYCGRG 1 cut(s) 1985
BmgT120I GGNCC 3 cut(s) 329, 749, 1169
BmiI GGNNCC 5 cut(s) 211, 247, 447, 1430, 1966
BmrFI CCNGG 7 cut(s) 214, 450, 762, 1708, 1971, 2197, 2318
BmsI GCATC 5 cut(s) 100, 352, 533, 575, 1096
BpiI GAAGAC 1 cut(s) 779
BplI GAGNNNNNCTC 2 cut(s) 187, 219
BpmI CTGGAG 2 cut(s) 2072, 2217
BpuEI CTTGAG 5 cut(s) 189, 637, 1505, 1508, 1590
BpuMI CCSGG 1 cut(s) 450
Bsa29I ATCGAT 1 cut(s) 475
BsaHI GRCGYC 2 cut(s) 1429, 2025
BsaI GGTCTC 3 cut(s) 192, 1028, 2231
BsaJI CCNNGG 3 cut(s) 449, 1707, 1969
BsaWI WCCGGW 1 cut(s) 1177
Bsc4I CCNNNNNNNGG 5 cut(s) 1373, 1374, 1469, 1470, 2247
Bse1I ACTGG 4 cut(s) 133, 188, 267, 703
Bse3DI GCAATG 3 cut(s) 807, 1134, 2223
BseAI TCCGGA 1 cut(s) 1177
BseBI CCWGG 6 cut(s) 214, 762, 1708, 1971, 2197, 2318
BseCI ATCGAT 1 cut(s) 475
BseDI CCNNGG 3 cut(s) 449, 1707, 1969
BseGI GGATG 1 cut(s) 1852
BseLI CCNNNNNNNGG 5 cut(s) 1373, 1374, 1469, 1470, 2247
BseMI GCAATG 3 cut(s) 807, 1134, 2223
BseMII CTCAG 4 cut(s) 708, 918, 1257, 1527
BseNI ACTGG 4 cut(s) 133, 188, 267, 703
BseSI GKGCMC 1 cut(s) 1459
BseXI GCAGC 3 cut(s) 574, 618, 1777
BseYI CCCAGC 1 cut(s) 403
BsgI GTGCAG 1 cut(s) 1776
BshFI GGCC 4 cut(s) 54, 1706, 1908, 2251
BshNI GGYRCC 2 cut(s) 245, 1428
BshVI ATCGAT 1 cut(s) 475
BsiHKAI GWGCWC 2 cut(s) 390, 794
BsiHKCI CYCGRG 1 cut(s) 1985
BsiSI CCGG 2 cut(s) 449, 1178
BslFI GGGAC 4 cut(s) 356, 386, 1775, 2379
BslI CCNNNNNNNGG 5 cut(s) 1373, 1374, 1469, 1470, 2247
BsmAI GTCTC 8 cut(s) 192, 1028, 1194, 2133, 2231, 2233, 2310, 2367
BsmFI GGGAC 4 cut(s) 356, 386, 1775, 2379
BsmI GAATGC 1 cut(s) 365
BsnI GGCC 4 cut(s) 54, 1706, 1908, 2251
Bso31I GGTCTC 3 cut(s) 192, 1028, 2231
BsoBI CYCGRG 1 cut(s) 1985
Bsp1286I GDGCHC 3 cut(s) 390, 794, 1459
Bsp13I TCCGGA 1 cut(s) 1177
Bsp143I GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
BspACI CCGC 4 cut(s) 51, 59, 522, 1465
BspANI GGCC 4 cut(s) 54, 1706, 1908, 2251
BspCNI CTCAG 4 cut(s) 707, 917, 1256, 1526
BspDI ATCGAT 1 cut(s) 475
BspEI TCCGGA 1 cut(s) 1177
BspLI GGNNCC 5 cut(s) 211, 247, 447, 1430, 1966
BspMAI CTGCAG 1 cut(s) 1930
BspMI ACCTGC 1 cut(s) 2080
BspPI GGATC 6 cut(s) 30, 983, 1513, 1831, 2128, 2166
BspT107I GGYRCC 2 cut(s) 245, 1428
BspTNI GGTCTC 3 cut(s) 192, 1028, 2231
BsrDI GCAATG 3 cut(s) 807, 1134, 2223
BsrI ACTGG 4 cut(s) 133, 188, 267, 703
BssECI CCNNGG 3 cut(s) 449, 1707, 1969
BssMI GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
BssNI GRCGYC 2 cut(s) 1429, 2025
BssSI CACGAG 1 cut(s) 2088
Bst2BI CACGAG 1 cut(s) 2088
Bst2UI CCWGG 6 cut(s) 214, 762, 1708, 1971, 2197, 2318
Bst6I CTCTTC 1 cut(s) 2012
BstACI GRCGYC 2 cut(s) 1429, 2025
BstAPI GCANNNNNTGC 1 cut(s) 48
BstC8I GCNNGC 4 cut(s) 564, 636, 844, 1930
BstDEI CTNAG 9 cut(s) 7, 191, 408, 694, 795, 904, 1243, 1513, 2398
BstF5I GGATG 1 cut(s) 1852
BstH2I RGCGCY 1 cut(s) 1432
BstHHI GCGC 2 cut(s) 19, 1431
BstKTI GATC 9 cut(s) 25, 261, 475, 991, 1521, 1530, 1839, 2123, 2161
BstMAI GTCTC 8 cut(s) 192, 1028, 1194, 2133, 2231, 2233, 2310, 2367
BstMBI GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
BstMWI GCNNNNNNNGC 3 cut(s) 39, 48, 1787
BstNI CCWGG 6 cut(s) 214, 762, 1708, 1971, 2197, 2318
BstNSI RCATGY 2 cut(s) 670, 2226
BstSCI CCNGG 7 cut(s) 212, 448, 760, 1706, 1969, 2195, 2316
BstSFI CTRYAG 3 cut(s) 1030, 1926, 2029
BstSLI GKGCMC 1 cut(s) 1459
BstV1I GCAGC 3 cut(s) 574, 618, 1777
BstV2I GAAGAC 1 cut(s) 779
BstX2I RGATCY 2 cut(s) 988, 1518
BstYI RGATCY 2 cut(s) 988, 1518
Bsu15I ATCGAT 1 cut(s) 475
BsuI GTATCC 1 cut(s) 465
BsuRI GGCC 4 cut(s) 54, 1706, 1908, 2251
BsuTUI ATCGAT 1 cut(s) 475
BtgZI GCGATG 1 cut(s) 1947
BtsCI GGATG 1 cut(s) 1852
BtsI GCAGTG 2 cut(s) 1474, 2291
BtsIMutI CAGTG 4 cut(s) 126, 1474, 1482, 2291
BveI ACCTGC 1 cut(s) 2080
Cac8I GCNNGC 4 cut(s) 564, 636, 844, 1930
CaiI CAGNNNCTG 4 cut(s) 219, 569, 1790, 2290
CfoI GCGC 2 cut(s) 19, 1431
Cfr13I GGNCC 3 cut(s) 329, 749, 1169
ClaI ATCGAT 1 cut(s) 475
CseI GACGC 1 cut(s) 1796
Csp6I GTAC 5 cut(s) 484, 519, 582, 1699, 2045
CviQI GTAC 5 cut(s) 484, 519, 582, 1699, 2045
DdeI CTNAG 9 cut(s) 7, 191, 408, 694, 795, 904, 1243, 1513, 2398
DinI GGCGCC 1 cut(s) 1430
DpnI GATC 9 cut(s) 24, 260, 474, 990, 1520, 1529, 1838, 2122, 2160
DpnII GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
DraI TTTAAA 1 cut(s) 1206
DriI GACNNNNNGTC 1 cut(s) 1186
EaeI YGGCCR 1 cut(s) 1704
Eam1104I CTCTTC 1 cut(s) 2012
Eam1105I GACNNNNNGTC 1 cut(s) 1186
EarI CTCTTC 1 cut(s) 2012
Ecl136II GAGCTC 1 cut(s) 388
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 3 cut(s) 192, 1028, 2231
Eco47I GGWCC 3 cut(s) 329, 749, 1169
Eco53kI GAGCTC 1 cut(s) 388
Eco57I CTGAAG 1 cut(s) 2300
Eco88I CYCGRG 1 cut(s) 1985
EcoICRI GAGCTC 1 cut(s) 388
EcoRI GAATTC 3 cut(s) 64, 899, 2344
EcoRII CCWGG 6 cut(s) 212, 760, 1706, 1969, 2195, 2316
EcoT22I ATGCAT 2 cut(s) 367, 471
EcoT38I GRGCYC 1 cut(s) 390
EgeI GGCGCC 1 cut(s) 1430
EheI GGCGCC 1 cut(s) 1430
FalI AAGNNNNNCTT 4 cut(s) 1599, 1631, 1713, 1745
FaqI GGGAC 4 cut(s) 356, 386, 1775, 2379
FauI CCCGC 1 cut(s) 1472
FbaI TGATCA 1 cut(s) 258
FblI GTMKAC 2 cut(s) 1768, 2068
Fnu4HI GCNGC 4 cut(s) 52, 588, 632, 1791
FokI GGATG 1 cut(s) 1859
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 4 cut(s) 52, 588, 632, 1791
FspBI CTAG 5 cut(s) 708, 1647, 1914, 1979, 2339
FspI TGCGCA 1 cut(s) 18
GlaI GCGC 2 cut(s) 18, 1430
GluI GCNGC 4 cut(s) 52, 588, 632, 1791
GsaI CCCAGC 1 cut(s) 407
GsuI CTGGAG 2 cut(s) 2072, 2217
HaeII RGCGCY 1 cut(s) 1432
HaeIII GGCC 4 cut(s) 54, 1706, 1908, 2251
HapII CCGG 2 cut(s) 449, 1178
HgaI GACGC 1 cut(s) 1796
HhaI GCGC 2 cut(s) 19, 1431
Hin1I GRCGYC 2 cut(s) 1429, 2025
Hin6I GCGC 2 cut(s) 17, 1429
HinP1I GCGC 2 cut(s) 17, 1429
HincII GTYRAC 1 cut(s) 934
HindII GTYRAC 1 cut(s) 934
HinfI GANTC 6 cut(s) 344, 477, 1049, 1059, 1549, 1686
HpaI GTTAAC 1 cut(s) 934
HpaII CCGG 2 cut(s) 449, 1178
HphI GGTGA 2 cut(s) 143, 1044
Hpy166II GTNNAC 7 cut(s) 664, 934, 1283, 1506, 1769, 1826, 2069
Hpy8I GTNNAC 7 cut(s) 664, 934, 1283, 1506, 1769, 1826, 2069
HpyAV CCTTC 2 cut(s) 127, 866
HpyCH4IV ACGT 2 cut(s) 2025, 2392
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 48, 1787
HpyF3I CTNAG 9 cut(s) 7, 191, 408, 694, 795, 904, 1243, 1513, 2398
HpySE526I ACGT 2 cut(s) 2025, 2392
Hsp92I GRCGYC 2 cut(s) 1429, 2025
HspAI GCGC 2 cut(s) 17, 1429
KasI GGCGCC 1 cut(s) 1428
Kpn2I TCCGGA 1 cut(s) 1177
Ksp22I TGATCA 1 cut(s) 258
KspAI GTTAAC 1 cut(s) 934
Kzo9I GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
LmnI GCTCC 5 cut(s) 385, 451, 763, 789, 839
Lsp1109I GCAGC 3 cut(s) 574, 618, 1777
LweI GCATC 5 cut(s) 100, 352, 533, 575, 1096
MaeI CTAG 5 cut(s) 708, 1647, 1914, 1979, 2339
MaeII ACGT 2 cut(s) 2025, 2392
MaeIII GTNAC 3 cut(s) 764, 1948, 2021
MalI GATC 9 cut(s) 24, 260, 474, 990, 1520, 1529, 1838, 2122, 2160
MboI GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
MfeI CAATTG 1 cut(s) 1407
MflI RGATCY 2 cut(s) 988, 1518
MhlI GDGCHC 3 cut(s) 390, 794, 1459
MlsI TGGCCA 1 cut(s) 1706
MluNI TGGCCA 1 cut(s) 1706
Mly113I GGCGCC 1 cut(s) 1429
MlyI GAGTC 2 cut(s) 338, 1680
MmeI TCCRAC 3 cut(s) 1636, 2098, 2251
Mox20I TGGCCA 1 cut(s) 1706
Mph1103I ATGCAT 2 cut(s) 367, 471
MroI TCCGGA 1 cut(s) 1177
MroXI GAANNNNTTC 1 cut(s) 1327
MscI TGGCCA 1 cut(s) 1706
MslI CAYNNNNRTG 3 cut(s) 429, 1845, 2153
Msp20I TGGCCA 1 cut(s) 1706
MspI CCGG 2 cut(s) 449, 1178
MspR9I CCNGG 7 cut(s) 214, 450, 762, 1708, 1971, 2197, 2318
MunI CAATTG 1 cut(s) 1407
Mva1269I GAATGC 1 cut(s) 365
MvaI CCWGG 6 cut(s) 214, 762, 1708, 1971, 2197, 2318
MwoI GCNNNNNNNGC 3 cut(s) 39, 48, 1787
NarI GGCGCC 1 cut(s) 1429
NciI CCSGG 1 cut(s) 450
NdeII GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
NlaIV GGNNCC 5 cut(s) 211, 247, 447, 1430, 1966
NmeAIII GCCGAG 1 cut(s) 521
NmuCI GTSAC 1 cut(s) 2021
NsbI TGCGCA 1 cut(s) 18
NsiI ATGCAT 2 cut(s) 367, 471
NspI RCATGY 2 cut(s) 670, 2226
OliI CACNNNNGTG 1 cut(s) 2153
PctI GAATGC 1 cut(s) 365
PdmI GAANNNNTTC 1 cut(s) 1327
PfeI GAWTC 4 cut(s) 477, 1049, 1059, 1549
PflFI GACNNNGTC 1 cut(s) 347
PkrI GCNGC 4 cut(s) 53, 589, 633, 1792
PleI GAGTC 2 cut(s) 338, 1680
PluTI GGCGCC 1 cut(s) 1432
PpsI GAGTC 2 cut(s) 338, 1680
PsiI TTATAA 1 cut(s) 642
Psp124BI GAGCTC 1 cut(s) 390
Psp6I CCWGG 6 cut(s) 212, 760, 1706, 1969, 2195, 2316
PspFI CCCAGC 1 cut(s) 403
PspGI CCWGG 6 cut(s) 212, 760, 1706, 1969, 2195, 2316
PspN4I GGNNCC 5 cut(s) 211, 247, 447, 1430, 1966
PspPI GGNCC 3 cut(s) 329, 749, 1169
PstI CTGCAG 1 cut(s) 1930
PstNI CAGNNNCTG 4 cut(s) 219, 569, 1790, 2290
PsuI RGATCY 2 cut(s) 988, 1518
PsyI GACNNNGTC 1 cut(s) 347
RsaI GTAC 5 cut(s) 485, 520, 583, 1700, 2046
RsaNI GTAC 5 cut(s) 484, 519, 582, 1699, 2045
RseI CAYNNNNRTG 3 cut(s) 429, 1845, 2153
SacI GAGCTC 1 cut(s) 390
SatI GCNGC 4 cut(s) 52, 588, 632, 1791
Sau3AI GATC 9 cut(s) 22, 258, 472, 988, 1518, 1527, 1836, 2120, 2158
Sau96I GGNCC 3 cut(s) 329, 749, 1169
SbfI CCTGCAGG 1 cut(s) 1930
SchI GAGTC 2 cut(s) 338, 1680
ScrFI CCNGG 7 cut(s) 214, 450, 762, 1708, 1971, 2197, 2318
SdaI CCTGCAGG 1 cut(s) 1930
SduI GDGCHC 3 cut(s) 390, 794, 1459
SfaNI GCATC 5 cut(s) 100, 352, 533, 575, 1096
SfcI CTRYAG 3 cut(s) 1030, 1926, 2029
SfoI GGCGCC 1 cut(s) 1430
SinI GGWCC 3 cut(s) 329, 749, 1169
SmiI ATTTAAAT 1 cut(s) 1206
SmiMI CAYNNNNRTG 3 cut(s) 429, 1845, 2153
SmlI CTYRAG 5 cut(s) 204, 616, 1484, 1523, 1605
SmoI CTYRAG 5 cut(s) 204, 616, 1484, 1523, 1605
Sse8387I CCTGCAGG 1 cut(s) 1930
SsiI CCGC 4 cut(s) 51, 59, 522, 1465
SspDI GGCGCC 1 cut(s) 1428
SspI AATATT 2 cut(s) 656, 2178
SspMI CTAG 5 cut(s) 708, 1647, 1914, 1979, 2339
SstI GAGCTC 1 cut(s) 390
StyD4I CCNGG 7 cut(s) 212, 448, 760, 1706, 1969, 2195, 2316
SwaI ATTTAAAT 1 cut(s) 1206
TaiI ACGT 2 cut(s) 2028, 2395
TaqI TCGA 7 cut(s) 96, 462, 475, 527, 879, 1082, 2081
TaqII GACCGA 1 cut(s) 337
TatI WGTACW 2 cut(s) 1698, 2044
TauI GCSGC 1 cut(s) 54
TfiI GAWTC 4 cut(s) 477, 1049, 1059, 1549
TscAI CASTG 4 cut(s) 133, 1474, 1482, 2291
TseFI GTSAC 1 cut(s) 2021
TseI GCWGC 3 cut(s) 587, 631, 1790
Tsp45I GTSAC 1 cut(s) 2021
TspDTI ATGAA 8 cut(s) 25, 109, 743, 1269, 1619, 1686, 2124, 2343
TspGWI ACGGA 1 cut(s) 747
TspRI CASTG 4 cut(s) 133, 1474, 1482, 2291
Tth111I GACNNNGTC 1 cut(s) 347
VpaK11BI GGWCC 3 cut(s) 329, 749, 1169
XapI RAATTY 8 cut(s) 64, 899, 1201, 1389, 1639, 1879, 1918, 2344
XbaI TCTAGA 2 cut(s) 707, 1913
XceI RCATGY 2 cut(s) 670, 2226
XmiI GTMKAC 2 cut(s) 1768, 2068
XmnI GAANNNNTTC 1 cut(s) 1327
XspI CTAG 5 cut(s) 708, 1647, 1914, 1979, 2339
ZraI GACGTC 1 cut(s) 2026
Zsp2I ATGCAT 2 cut(s) 367, 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.