Prupe.3G054500_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Reverse (-)
3827342 .. 3837928
10587 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G054500.2

Sequence Viewer

Length: 2637 bp
ATGGAGATGTTCAGACATCTTCTTTCTGCATTGCTTTGTGGTTTTGCTCTTATACTTGTAGTTCATGCACAAGATGATCAATCAGGCTTCATCAGCTTGGATTGTGGGCTGCCTACAAATTCTAGCTACTCTGAGCCAACAACAGGCCTTAACTACATTTCAGATGCAGCCTTCATATCCACTGGTGTAAGCAAAAGCATTGCCCCTCAGTACAAAGCTACTCATCAACAGCAAGCAGCTTATGTCAGGAGCTTTCCTCAGGGGGTCAAGAACTGTTACAGAGTAAACATTACACAAGGAACTAAATATTTGATCCGAGCAAGTTTCGTGTATGGAAATTATGACGGTTTAAATGAGCTGCCAAAGTTTGATCTTCTCTTTGGAGCTAATTCTTGGGACTCAGTGGCATTTGTTGATGCATCTTCGAGTACTATCAAAGAACTTGTCCATGTTCCCACATTAGATTATATACATGTGTGTCTAGTCAACAAGGGCACTGGAACACCATTCATTTCAGCATTGGAGTTGAGGCCTTTGAAGAACACTACTTATGTGACTCCAACGGGTTCGTTGGAACTCTTCCTTCGCTTAGATGTCGGTTTGACATCCAATCAATCATACAGGTATGATTACGATGCTTTGGATCGGAGTTGGGTACCTTACACCTACAATAAGTGGACACAGTTAACTACCTCACTTACCGTAGATGCTCAAATTCATAATGACTACCAAGTACCATCTATAGCAATGAGAACTGCCAGCACGCCGATTAATGCCAGTGCTTCCATGGACTTCAGCTGGGAATCCCCGGATACATCGACTGAATACTATGTGTACCTGCACTTTGCTGAACTCCAGCAGCTTAAAGCCAACCAGTCCAGAACATTCAATATCACTCTGAATGGAGATTATTGGTTTGGACCTTTTGTCCCAGAGTACTTGTCCACAATCACTGTGTTCAGCCCCTCATCCTTAACTGGAGGCAACTATAGTTTTTCACTTGTTCAAACTGAGAATTCAACTCTCCCACCAATCCTCAATGCCATGGAGATCTACTCATTGATCGATTTATCGCAACCAGAAACTGATGGAGATGATGTGGCTGCCATCATAAACATAAAGTCAACATATGGAGTGGACAAAGATTGGCAGGGAGACCCATGTACTCCCCAAGGCTACATGTGGGAAGGTCTTAACTGTAGCTACAGTGGATCCCCTAGAATCGTATCCTTGGACCTGTCCTCGAGTGGATTGACCGGGGAGATAACTTCATATATATCCAATCTTGCCATGTTACAATCTCTGGATTTATCGAACAATAGCTTGACTGGATCAGTACCTGAATTTTTGTCTAAATTGCCAAACCTGAAAGTCCTTAACCTGGAAAGAAACAAGCTCAACGGTTCAGTTCCAGCTGACCTTATTCAAAGATCAACAAGTGGTTCACTATCATTGAGTGTGGGAGAAAATGAAGACCTATGTGCATCAATATCATGCAAAAAGGAGGAGGAGAAGAAGAAAAATATAGTAATTCCAATAATAGCATCAATTGGTGGGTTTTCTATTCTTGTGGTAGCAGCAGTGGCTGTATTCATGGGCCTGAAAAGAGGAAGAAAACAAGGAGTTCCACAACAACCCAATAATCAAATTGATTCATTCGAGTCCAAAAAACGCCAATTCACATACTCAGACGTCCTGAGGATCACAAATAACTTTCAGACAAAAGTTCTTGGGCGAGGTGGATTCGGAAAAGTTTACCATGGTTATGTTGATGATACTCAAGTAGCTGTGAAGATGCTTTCTCCAACATCAGGTCAAGGATACCAACAATTTCAAGCAGAGGTCAAACTTCTTATCAGAGTTCACCATAGAAACTTGACTAGCCTTGTTGGATACTGCAATGAAGGAACCAACATGGCACTCATCTATGAATTTATGGCCAATGGAGATTTGGAATCACATCTTCGAGGCGAGGACAGTAATGCAAATGTGTTGACTTGGGAAGGTAGACTTCAAATAGCAACAGATGCAGCACAAGGATTGGAGTATCTGCACAATGGTTGTAAGCCGCCTATTGTCCATAGAGATGTGAAGGCAACAAATATTTTGTTGGCTGAAAATTTCCAAGCAAAATTAGCTGACTTTGGCCTGTCCAGAATTTTCCCAACTGATGGAGGCACTCATATGTCCACAGCTGTAGCTGGCACCCCTGGATACCTTGACCCGGAGTACCACACAACAGGATGGCTGAATGAGAAAAGTGATGTTTATAGCTTCGGAGTTGTGCTGTTGGAGATCATCACTAGCCGCCATGCAATATCTAGAACACAAGAGAAAGTTCATGTCAGTCAATGGGTTAGCTCTATGCTTGCTAAAGGGGATATCAAAACTATCGTTGATCCGAGGTTACATGGAGATTACGAAATTAACTCTGCCTGGAAGGCTGTTGAACTAGCAATGGAGTGTGTGTCTGACACATCCACCAGAAGGCCAAACATGAGTGCGGTAGTGATAGGGTTGAAGGAGTGTTTGGCAGCAGAGTTGGCTCGAACCAACGTGAGCCGTGTGACTGAATCAACAGATTCAGTTGTGTACTCTATGAATGTGACTACTGAACTCAGTCCCTTGGCAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

879

Amino Acids

96.76

Weight (kDa)

5.47

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1695
Acc36I ACCTGC 1 cut(s) 846
Acc65I GGTACC 1 cut(s) 655
AccB1I GGYRCC 2 cut(s) 655, 2204
AccB7I CCANNNNNTGG 1 cut(s) 2171
AccI GTMKAC 1 cut(s) 2008
AciI CCGC 3 cut(s) 2069, 2308, 2504
AclWI GGATC 7 cut(s) 307, 651, 1206, 1219, 1339, 1709, 2393
AcoI YGGCCR 1 cut(s) 1938
AcsI RAATTY 7 cut(s) 118, 714, 1015, 1343, 1931, 2119, 2157
AcuI CTGAAG 1 cut(s) 778
AcyI GRCGYC 1 cut(s) 1692
AfiI CCNNNNNNNGG 7 cut(s) 143, 1381, 1811, 2171, 2224, 2487, 2631
AflIII ACRYGT 2 cut(s) 472, 1179
AgsI TTSAA 9 cut(s) 538, 889, 1007, 1020, 1427, 1835, 2015, 2450, 2521
AhdI GACNNNNNGTC 1 cut(s) 926
AjnI CCWGG 3 cut(s) 1380, 2209, 2435
AjuI GAANNNNNNNTTGG 2 cut(s) 2513, 2545
Alw26I GTCTC 1 cut(s) 1149
AlwI GGATC 7 cut(s) 307, 651, 1206, 1219, 1339, 1709, 2393
AlwNI CAGNNNCTG 3 cut(s) 1085, 1340, 1586
Ama87I CYCGRG 1 cut(s) 1243
AoxI GGCC 6 cut(s) 145, 530, 1597, 1938, 2146, 2489
ApeKI GCWGC 9 cut(s) 109, 167, 236, 358, 859, 1103, 1577, 2030, 2534
ApoI RAATTY 7 cut(s) 118, 714, 1015, 1343, 1931, 2119, 2157
ArsI GACNNNNNNTTYG 2 cut(s) 429, 461
AseI ATTAAT 1 cut(s) 771
Asp718I GGTACC 1 cut(s) 655
AspS9I GGNCC 3 cut(s) 920, 1234, 1597
AsuC2I CCSGG 3 cut(s) 809, 1258, 2225
AsuHPI GGTGA 1 cut(s) 1856
AvaI CYCGRG 1 cut(s) 1243
AvaII GGWCC 2 cut(s) 920, 1234
AxyI CCTNAGG 2 cut(s) 258, 1697
BaeGI GKGCMC 1 cut(s) 497
BaeI ACNNNNGTAYC 2 cut(s) 1767, 1800
BalI TGGCCA 1 cut(s) 1940
BamHI GGATCC 1 cut(s) 1211
BanI GGYRCC 2 cut(s) 655, 2204
BbsI GAAGAC 1 cut(s) 1479
BbvI GCAGC 9 cut(s) 96, 179, 248, 345, 871, 1090, 1589, 2042, 2546
BccI CCATC 5 cut(s) 745, 1082, 1115, 2165, 2238
BceAI ACGGC 1 cut(s) 2547
BciT130I CCWGG 3 cut(s) 1382, 2211, 2437
BciVI GTATCC 5 cut(s) 805, 1237, 1814, 1886, 2207
BclI TGATCA 1 cut(s) 76
BcnI CCSGG 3 cut(s) 809, 1258, 2225
BcoDI GTCTC 1 cut(s) 1149
BfaI CTAG 7 cut(s) 123, 482, 1218, 1881, 2304, 2322, 2453
BfmI CTRYAG 5 cut(s) 741, 988, 1198, 1204, 2196
BfuAI ACCTGC 1 cut(s) 846
BfuI GTATCC 5 cut(s) 805, 1237, 1814, 1886, 2207
BglI GCCNNNNNGGC 1 cut(s) 2441
BglII AGATCT 1 cut(s) 1050
BmcAI AGTACT 2 cut(s) 430, 938
Bme1390I CCNGG 6 cut(s) 809, 1258, 1382, 2211, 2225, 2437
Bme18I GGWCC 2 cut(s) 920, 1234
BmeRI GACNNNNNGTC 1 cut(s) 926
BmeT110I CYCGRG 1 cut(s) 1243
BmgT120I GGNCC 3 cut(s) 920, 1234, 1597
BmiI GGNNCC 4 cut(s) 657, 1213, 1909, 2206
BmrFI CCNGG 6 cut(s) 809, 1258, 1382, 2211, 2225, 2437
BmsI GCATC 9 cut(s) 154, 406, 428, 625, 697, 1493, 1553, 1785, 2017
BpiI GAAGAC 1 cut(s) 1479
BplI GAGNNNNNCTC 4 cut(s) 241, 273, 1040, 1072
BpmI CTGGAG 2 cut(s) 839, 999
BpuEI CTTGAG 1 cut(s) 1764
BpuMI CCSGG 3 cut(s) 809, 1258, 2225
Bsa29I ATCGAT 1 cut(s) 1065
BsaHI GRCGYC 1 cut(s) 1692
BsaI GGTCTC 1 cut(s) 1149
BsaXI ACNNNNNCTCC 4 cut(s) 1083, 1113, 2453, 2483
Bsc4I CCNNNNNNNGG 7 cut(s) 143, 1381, 1811, 2171, 2224, 2487, 2631
Bse1I ACTGG 6 cut(s) 187, 502, 777, 874, 982, 1333
Bse21I CCTNAGG 2 cut(s) 258, 1697
Bse3DI GCAATG 5 cut(s) 29, 198, 753, 1906, 2463
BseBI CCWGG 3 cut(s) 1382, 2211, 2437
BseCI ATCGAT 1 cut(s) 1065
BseGI GGATG 4 cut(s) 605, 968, 2249, 2477
BseLI CCNNNNNNNGG 7 cut(s) 143, 1381, 1811, 2171, 2224, 2487, 2631
BseMI GCAATG 5 cut(s) 29, 198, 753, 1906, 2463
BseMII CTCAG 8 cut(s) 123, 221, 272, 414, 1002, 1688, 1701, 2632
BseNI ACTGG 6 cut(s) 187, 502, 777, 874, 982, 1333
BseRI GAGGAG 2 cut(s) 1520, 1523
BseSI GKGCMC 1 cut(s) 497
BseXI GCAGC 9 cut(s) 96, 179, 248, 345, 871, 1090, 1589, 2042, 2546
BseYI CCCAGC 1 cut(s) 798
BsgI GTGCAG 2 cut(s) 824, 2036
BshFI GGCC 6 cut(s) 147, 532, 1599, 1940, 2148, 2491
BshNI GGYRCC 2 cut(s) 655, 2204
BshVI ATCGAT 1 cut(s) 1065
BsiHKCI CYCGRG 1 cut(s) 1243
BsiSI CCGG 3 cut(s) 809, 1257, 2225
BslFI GGGAC 3 cut(s) 410, 914, 2607
BslI CCNNNNNNNGG 7 cut(s) 143, 1381, 1811, 2171, 2224, 2487, 2631
BsmAI GTCTC 1 cut(s) 1149
BsmFI GGGAC 3 cut(s) 410, 914, 2607
BsnI GGCC 6 cut(s) 147, 532, 1599, 1940, 2148, 2491
Bso31I GGTCTC 1 cut(s) 1149
BsoBI CYCGRG 1 cut(s) 1243
Bsp1286I GDGCHC 1 cut(s) 497
Bsp19I CCATGG 3 cut(s) 786, 1044, 1759
BspACI CCGC 3 cut(s) 2069, 2308, 2504
BspANI GGCC 6 cut(s) 147, 532, 1599, 1940, 2148, 2491
BspCNI CTCAG 8 cut(s) 124, 220, 271, 413, 1003, 1689, 1700, 2631
BspDI ATCGAT 1 cut(s) 1065
BspLI GGNNCC 4 cut(s) 657, 1213, 1909, 2206
BspMI ACCTGC 1 cut(s) 846
BspPI GGATC 7 cut(s) 307, 651, 1206, 1219, 1339, 1709, 2393
BspT107I GGYRCC 2 cut(s) 655, 2204
BspTNI GGTCTC 1 cut(s) 1149
BsrDI GCAATG 5 cut(s) 29, 198, 753, 1906, 2463
BsrI ACTGG 6 cut(s) 187, 502, 777, 874, 982, 1333
BssNI GRCGYC 1 cut(s) 1692
BssT1I CCWWGG 6 cut(s) 786, 1044, 1171, 1230, 1759, 2625
Bst2UI CCWGG 3 cut(s) 1382, 2211, 2437
Bst4CI ACNGT 9 cut(s) 275, 347, 684, 703, 955, 1199, 1208, 1403, 1979
Bst6I CTCTTC 1 cut(s) 584
BstACI GRCGYC 1 cut(s) 1692
BstAPI GCANNNNNTGC 1 cut(s) 2027
BstC8I GCNNGC 5 cut(s) 234, 760, 764, 2203, 2370
BstDEI CTNAG 9 cut(s) 132, 207, 258, 400, 589, 1011, 1687, 1697, 2618
BstDSI CCRYGG 3 cut(s) 786, 1044, 1759
BstENI CCTNNNNNAGG 1 cut(s) 2629
BstF5I GGATG 4 cut(s) 605, 968, 2249, 2477
BstMAI GTCTC 1 cut(s) 1149
BstMWI GCNNNNNNNGC 6 cut(s) 93, 1583, 2027, 2135, 2441, 2543
BstNI CCWGG 3 cut(s) 1382, 2211, 2437
BstNSI RCATGY 2 cut(s) 476, 1183
BstSCI CCNGG 6 cut(s) 807, 1256, 1380, 2209, 2223, 2435
BstSFI CTRYAG 5 cut(s) 741, 988, 1198, 1204, 2196
BstSLI GKGCMC 1 cut(s) 497
BstV1I GCAGC 9 cut(s) 96, 179, 248, 345, 871, 1090, 1589, 2042, 2546
BstV2I GAAGAC 1 cut(s) 1479
BstX2I RGATCY 2 cut(s) 1050, 1211
BstYI RGATCY 2 cut(s) 1050, 1211
Bsu15I ATCGAT 1 cut(s) 1065
Bsu36I CCTNAGG 2 cut(s) 258, 1697
BsuI GTATCC 5 cut(s) 805, 1237, 1814, 1886, 2207
BsuRI GGCC 6 cut(s) 147, 532, 1599, 1940, 2148, 2491
BsuTUI ATCGAT 1 cut(s) 1065
BtgI CCRYGG 3 cut(s) 786, 1044, 1759
BtsCI GGATG 4 cut(s) 605, 968, 2249, 2477
BtsI GCAGTG 1 cut(s) 1587
BtsIMutI CAGTG 7 cut(s) 180, 408, 495, 784, 951, 1213, 1587
BveI ACCTGC 1 cut(s) 846
Cac8I GCNNGC 5 cut(s) 234, 760, 764, 2203, 2370
CaiI CAGNNNCTG 3 cut(s) 1085, 1340, 1586
Cfr13I GGNCC 3 cut(s) 920, 1234, 1597
ClaI ATCGAT 1 cut(s) 1065
DdeI CTNAG 9 cut(s) 132, 207, 258, 400, 589, 1011, 1687, 1697, 2618
DraI TTTAAA 1 cut(s) 351
DriI GACNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 1 cut(s) 1938
Eam1104I CTCTTC 1 cut(s) 584
Eam1105I GACNNNNNGTC 1 cut(s) 926
EarI CTCTTC 1 cut(s) 584
Eco130I CCWWGG 6 cut(s) 786, 1044, 1171, 1230, 1759, 2625
Eco147I AGGCCT 2 cut(s) 147, 532
Eco31I GGTCTC 1 cut(s) 1149
Eco32I GATATC 1 cut(s) 2383
Eco47I GGWCC 2 cut(s) 920, 1234
Eco57I CTGAAG 1 cut(s) 778
Eco81I CCTNAGG 2 cut(s) 258, 1697
Eco88I CYCGRG 1 cut(s) 1243
EcoNI CCTNNNNNAGG 1 cut(s) 2629
EcoRI GAATTC 1 cut(s) 1015
EcoRII CCWGG 3 cut(s) 1380, 2209, 2435
EcoRV GATATC 1 cut(s) 2383
EcoT14I CCWWGG 6 cut(s) 786, 1044, 1171, 1230, 1759, 2625
EcoT22I ATGCAT 1 cut(s) 421
ErhI CCWWGG 6 cut(s) 786, 1044, 1171, 1230, 1759, 2625
FalI AAGNNNNNCTT 2 cut(s) 1995, 2027
FaqI GGGAC 3 cut(s) 410, 914, 2607
FauNDI CATATG 2 cut(s) 1129, 2184
FbaI TGATCA 1 cut(s) 76
FblI GTMKAC 1 cut(s) 2008
FokI GGATG 4 cut(s) 592, 955, 2256, 2464
FspBI CTAG 7 cut(s) 123, 482, 1218, 1881, 2304, 2322, 2453
GsaI CCCAGC 1 cut(s) 802
GsuI CTGGAG 2 cut(s) 839, 999
HaeIII GGCC 6 cut(s) 147, 532, 1599, 1940, 2148, 2491
HapII CCGG 3 cut(s) 809, 1257, 2225
Hin1I GRCGYC 1 cut(s) 1692
HincII GTYRAC 4 cut(s) 487, 687, 1125, 1995
HindII GTYRAC 4 cut(s) 487, 687, 1125, 1995
HpaI GTTAAC 1 cut(s) 687
HpaII CCGG 3 cut(s) 809, 1257, 2225
HphI GGTGA 1 cut(s) 1856
Hpy188III TCNNGA 7 cut(s) 247, 268, 879, 1304, 1696, 2154, 2322
HpyAV CCTTC 9 cut(s) 181, 593, 1181, 1898, 1997, 2086, 2434, 2481, 2515
HpyCH4III ACNGT 9 cut(s) 275, 347, 684, 703, 955, 1199, 1208, 1403, 1979
HpyCH4IV ACGT 2 cut(s) 1692, 2556
HpyF10VI GCNNNNNNNGC 6 cut(s) 93, 1583, 2027, 2135, 2441, 2543
HpyF3I CTNAG 9 cut(s) 132, 207, 258, 400, 589, 1011, 1687, 1697, 2618
HpySE526I ACGT 2 cut(s) 1692, 2556
Hsp92I GRCGYC 1 cut(s) 1692
KpnI GGTACC 1 cut(s) 659
Ksp22I TGATCA 1 cut(s) 76
KspAI GTTAAC 1 cut(s) 687
LmnI GCTCC 2 cut(s) 249, 383
Lsp1109I GCAGC 9 cut(s) 96, 179, 248, 345, 871, 1090, 1589, 2042, 2546
LweI GCATC 9 cut(s) 154, 406, 428, 625, 697, 1493, 1553, 1785, 2017
MaeI CTAG 7 cut(s) 123, 482, 1218, 1881, 2304, 2322, 2453
MaeII ACGT 2 cut(s) 1692, 2556
MaeIII GTNAC 6 cut(s) 275, 553, 1293, 2406, 2566, 2605
MfeI CAATTG 1 cut(s) 1548
MflI RGATCY 2 cut(s) 1050, 1211
MhlI GDGCHC 1 cut(s) 497
MlsI TGGCCA 1 cut(s) 1940
MluNI TGGCCA 1 cut(s) 1940
MlyI GAGTC 3 cut(s) 392, 550, 1670
MmeI TCCRAC 5 cut(s) 552, 584, 1829, 1870, 2271
Mox20I TGGCCA 1 cut(s) 1940
Mph1103I ATGCAT 1 cut(s) 421
MscI TGGCCA 1 cut(s) 1940
MseI TTAA 9 cut(s) 150, 350, 686, 771, 864, 974, 1194, 1377, 2427
MslI CAYNNNNRTG 3 cut(s) 1764, 2085, 2183
Msp20I TGGCCA 1 cut(s) 1940
MspA1I CMGCKG 3 cut(s) 798, 1415, 2195
MspI CCGG 3 cut(s) 809, 1257, 2225
MspR9I CCNGG 6 cut(s) 809, 1258, 1382, 2211, 2225, 2437
MunI CAATTG 1 cut(s) 1548
MvaI CCWGG 3 cut(s) 1382, 2211, 2437
MwoI GCNNNNNNNGC 6 cut(s) 93, 1583, 2027, 2135, 2441, 2543
NciI CCSGG 3 cut(s) 809, 1258, 2225
NcoI CCATGG 3 cut(s) 786, 1044, 1759
NdeI CATATG 2 cut(s) 1129, 2184
NlaIV GGNNCC 4 cut(s) 657, 1213, 1909, 2206
NmuCI GTSAC 3 cut(s) 553, 2566, 2605
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 2 cut(s) 476, 1183
PaeR7I CTCGAG 1 cut(s) 1243
PceI AGGCCT 2 cut(s) 147, 532
PciI ACATGT 2 cut(s) 472, 1179
PfeI GAWTC 7 cut(s) 803, 1221, 1652, 1743, 1955, 2573, 2582
PflMI CCANNNNNTGG 1 cut(s) 2171
PleI GAGTC 3 cut(s) 392, 550, 1669
PpsI GAGTC 3 cut(s) 392, 550, 1669
PscI ACATGT 2 cut(s) 472, 1179
PshBI ATTAAT 1 cut(s) 771
Psp6I CCWGG 3 cut(s) 1380, 2209, 2435
PspFI CCCAGC 1 cut(s) 798
PspGI CCWGG 3 cut(s) 1380, 2209, 2435
PspN4I GGNNCC 4 cut(s) 657, 1213, 1909, 2206
PspPI GGNCC 3 cut(s) 920, 1234, 1597
PspXI VCTCGAGB 1 cut(s) 1243
PstNI CAGNNNCTG 3 cut(s) 1085, 1340, 1586
PsuI RGATCY 2 cut(s) 1050, 1211
PvuII CAGCTG 3 cut(s) 798, 1415, 2195
RseI CAYNNNNRTG 3 cut(s) 1764, 2085, 2183
SaqAI TTAA 9 cut(s) 150, 350, 686, 771, 864, 974, 1194, 1377, 2427
Sau96I GGNCC 3 cut(s) 920, 1234, 1597
ScaI AGTACT 2 cut(s) 430, 938
SchI GAGTC 3 cut(s) 392, 550, 1670
ScrFI CCNGG 6 cut(s) 809, 1258, 1382, 2211, 2225, 2437
SduI GDGCHC 1 cut(s) 497
SfaNI GCATC 9 cut(s) 154, 406, 428, 625, 697, 1493, 1553, 1785, 2017
SfcI CTRYAG 5 cut(s) 741, 988, 1198, 1204, 2196
Sfr274I CTCGAG 1 cut(s) 1243
SinI GGWCC 2 cut(s) 920, 1234
SlaI CTCGAG 1 cut(s) 1243
SmiMI CAYNNNNRTG 3 cut(s) 1764, 2085, 2183
SmlI CTYRAG 2 cut(s) 1243, 1779
SmoI CTYRAG 2 cut(s) 1243, 1779
SseBI AGGCCT 2 cut(s) 147, 532
SsiI CCGC 3 cut(s) 2069, 2308, 2504
SspI AATATT 2 cut(s) 308, 2104
SspMI CTAG 7 cut(s) 123, 482, 1218, 1881, 2304, 2322, 2453
StuI AGGCCT 2 cut(s) 147, 532
StyD4I CCNGG 6 cut(s) 807, 1256, 1380, 2209, 2223, 2435
StyI CCWWGG 6 cut(s) 786, 1044, 1171, 1230, 1759, 2625
TaaI ACNGT 9 cut(s) 275, 347, 684, 703, 955, 1199, 1208, 1403, 1979
TaiI ACGT 2 cut(s) 1695, 2559
TaqI TCGA 8 cut(s) 425, 818, 1065, 1244, 1313, 1659, 1966, 2548
TatI WGTACW 5 cut(s) 210, 428, 936, 1163, 2592
TauI GCSGC 2 cut(s) 2071, 2310
TfiI GAWTC 7 cut(s) 803, 1221, 1652, 1743, 1955, 2573, 2582
Tru1I TTAA 9 cut(s) 150, 350, 686, 771, 864, 974, 1194, 1377, 2427
Tru9I TTAA 9 cut(s) 150, 350, 686, 771, 864, 974, 1194, 1377, 2427
TscAI CASTG 7 cut(s) 187, 408, 502, 784, 958, 1213, 1587
TseFI GTSAC 3 cut(s) 553, 2566, 2605
TseI GCWGC 9 cut(s) 109, 167, 236, 358, 859, 1103, 1577, 2030, 2534
Tsp45I GTSAC 3 cut(s) 553, 2566, 2605
TspRI CASTG 7 cut(s) 187, 408, 502, 784, 958, 1213, 1587
Van91I CCANNNNNTGG 1 cut(s) 2171
VpaK11BI GGWCC 2 cut(s) 920, 1234
VspI ATTAAT 1 cut(s) 771
XagI CCTNNNNNAGG 1 cut(s) 2629
XapI RAATTY 7 cut(s) 118, 714, 1015, 1343, 1931, 2119, 2157
XbaI TCTAGA 1 cut(s) 2321
XceI RCATGY 2 cut(s) 476, 1183
XcmI CCANNNNNNNNNTGG 2 cut(s) 784, 1948
XhoI CTCGAG 1 cut(s) 1243
XmiI GTMKAC 1 cut(s) 2008
XspI CTAG 7 cut(s) 123, 482, 1218, 1881, 2304, 2322, 2453
ZraI GACGTC 1 cut(s) 1693
ZrmI AGTACT 2 cut(s) 430, 938
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.