MD09G1198600.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000083
Physical Location & Seq
Reverse (-)
18103934 .. 18106863
2930 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1198600.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGGATGCTTATCAGTCTTCTCGCATTATGATGCTGGTACAATAACTAATAAAACATACAGGTTTGCCTTCTCTTTTGTTATTGATACAGATGACATTTATGATTTCATATGGGATCCCCATCATTACAGTGAATGGAAACAAGTAACCACTTCACTGACCATCGACCCTGAAAATCAGAATGTCTACCAAGTGCCATCTATTGTCATGAGCTCAACGCCAAAAAATGCAACTAATTTAGATCTTTGGTGGAATTCCCCTGATGAAAATACCAAATATTATGTCTACCTTCAATTTGCTGAAATTGAAAAACTCCAAACCAACCAGACTAGATTGTTAAGCATTACTCGGAATGGAAAGCCCTTTCAGGAGCCTTTCCCTCTTCTGTACTTGTCCACATCGACAGTATCCATGACAGAGGCTTTAACTGGAGCAGCACTGCACAACGCGTCAATCTCTCATGATGGAAACTCTACCCTTCCACCCATCCTCAATGCCTTTGAGATTTATACGGTCATTGAGTTCTTGCAGGAAGAAACTAACCAACAAGATGTTGACTTCATACAAAACATCAAGAACACATACGGAGTGAAGAGAAATTGGCAAGGTGACCCATGTGCACCTCAAGAGTACTTGTGGGAAGGGTTACACTGCAGCTATAATGGTTATGAGCCCCCCAGAATCATATCCTTAAAATTGGAGAAAAACAACCTCACAGGTCCTGTTCCAGTTGGACTAATTCAAAAATCAAATGACGGTTCACTAACATTAAGCCTGTGTGAGAATCAAAATCTAAATGTACTGCTTCACTGCGAAAAGGAAAAGAAAAAGGACAGTATTTTGGTTCCAGTAGCAACATCAGTTGTCGGAATCTTAATCCTTCTAACAATTGTAGCAGCTGTAATTTGGTGGCGTTTCAAAAACAAAGAAACCATGGATGTTGGTAGAGGTGGATTTGGATCAGTTTACCATGGCTACATAGGTGATACTCAAGTAGCTGTGAAGATGCTGTCACAATCATCGGTTCAAGGATATCAAGAATTTCATTCAGAAGTTAATCTTCTCATGAGAGTTCACCACAGGAACTTGACAAGCCTTGTCGGATATTGCACTGACGGAACCAATACAGGGCTCATTTATGAATACATGTTCAATGGAAACTTACACGAGCATCTTTCAGATAAATTAATAGCAGAGAAAGAAACAACCCTCAAAAGAAACTTTAACAACACTCTGAACAATCTAAAAGTGCACGTAAAAGCATACAGGGAAATAAACACTAGGCCACATGGTGAACAATCAAACAACTTCATCAACATGCTCTTAACACCTTATCTGCACTACGGCTGCAAACCTCCTATAATCCACAGAGATGTGAAATCTACAAATATATTGTTGAATGAAAACTTTCAAGCCAAACTAGCGGATTTTGGCCTATCCAGAAGTTTTCCTGCTGAGGATGGGACTCGTGTGTGGACATGTGTTGCGGGAACTCCTGGGTGTCTTTTTGCCTTTTTACTTTACCCTTCATCTTTCGTCTGCTATACAAAGGAACCAGCAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

522

Amino Acids

59.06

Weight (kDa)

5.94

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 27 - 172 2.5e-32 Malectin-like domain
Pkinase PF00069 312 - 487 5.8e-22 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 313 - 487 5.3e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 186, 285
AccII CGCG 1 cut(s) 449
AciI CCGC 2 cut(s) 1424, 1487
AclWI GGATC 3 cut(s) 110, 123, 967
AcsI RAATTY 2 cut(s) 253, 1040
AdeI CACNNNGTG 1 cut(s) 1292
AfaI GTAC 4 cut(s) 40, 389, 632, 801
AfiI CCNNNNNNNGG 1 cut(s) 1128
AflIII ACRYGT 3 cut(s) 447, 1146, 1478
AgsI TTSAA 8 cut(s) 293, 308, 743, 919, 1028, 1153, 1399, 1412
AjnI CCWGG 1 cut(s) 1495
AluBI AGCT 4 cut(s) 213, 657, 899, 998
AluI AGCT 4 cut(s) 213, 657, 899, 998
Alw21I GWGCWC 3 cut(s) 215, 622, 1254
Alw44I GTGCAC 2 cut(s) 618, 1250
AlwI GGATC 3 cut(s) 110, 123, 967
AlwNI CAGNNNCTG 1 cut(s) 722
AoxI GGCC 2 cut(s) 1283, 1432
ApaLI GTGCAC 2 cut(s) 618, 1250
ApeKI GCWGC 4 cut(s) 434, 654, 896, 1347
ApoI RAATTY 2 cut(s) 253, 1040
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
AseI ATTAAT 1 cut(s) 1187
Asp700I GAANNNNTTC 1 cut(s) 1407
AspS9I GGNCC 1 cut(s) 719
AsuHPI GGTGA 4 cut(s) 620, 995, 1067, 1304
AvaII GGWCC 1 cut(s) 719
BaeGI GKGCMC 2 cut(s) 622, 1254
BaeI ACNNNNGTAYC 2 cut(s) 978, 1011
BamHI GGATCC 1 cut(s) 115
BanII GRGCYC 3 cut(s) 215, 675, 1134
BauI CACGAG 2 cut(s) 1166, 1467
BbsI GAAGAC 1 cut(s) 10
Bbv12I GWGCWC 3 cut(s) 215, 622, 1254
BbvCI CCTCAGC 1 cut(s) 1455
BbvI GCAGC 4 cut(s) 446, 666, 908, 1334
BccI CCATC 6 cut(s) 129, 170, 205, 458, 494, 1454
BceAI ACGGC 1 cut(s) 1360
BciT130I CCWGG 1 cut(s) 1497
BciVI GTATCC 1 cut(s) 418
BfaI CTAG 3 cut(s) 330, 1281, 1421
BfmI CTRYAG 1 cut(s) 652
BfuI GTATCC 1 cut(s) 418
BglII AGATCT 1 cut(s) 241
BisI GCNGC 4 cut(s) 435, 655, 897, 1348
BlsI GCNGC 4 cut(s) 436, 656, 898, 1349
BmcAI AGTACT 1 cut(s) 632
Bme1390I CCNGG 1 cut(s) 1497
Bme18I GGWCC 1 cut(s) 719
BmgT120I GGNCC 1 cut(s) 719
BmiI GGNNCC 5 cut(s) 117, 372, 846, 1120, 1554
BmrFI CCNGG 1 cut(s) 1497
BmsI GCATC 3 cut(s) 22, 996, 1180
BpiI GAAGAC 1 cut(s) 10
BpmI CTGGAG 1 cut(s) 450
Bpu10I CCTNAGC 1 cut(s) 1455
BpuEI CTTGAG 2 cut(s) 609, 975
BsaAI YACGTR 1 cut(s) 1255
BsaBI GATNNNNATC 3 cut(s) 10, 120, 958
BsaJI CCNNGG 3 cut(s) 933, 970, 1496
Bsc4I CCNNNNNNNGG 1 cut(s) 1128
Bse1I ACTGG 3 cut(s) 433, 728, 848
Bse8I GATNNNNATC 3 cut(s) 10, 120, 958
BseBI CCWGG 1 cut(s) 1497
BseDI CCNNGG 3 cut(s) 933, 970, 1496
BseGI GGATG 4 cut(s) 11, 486, 943, 1465
BseJI GATNNNNATC 3 cut(s) 10, 120, 958
BseLI CCNNNNNNNGG 1 cut(s) 1128
BseMII CTCAG 1 cut(s) 1446
BseNI ACTGG 3 cut(s) 433, 728, 848
BseSI GKGCMC 2 cut(s) 622, 1254
BseXI GCAGC 4 cut(s) 446, 666, 908, 1334
BsgI GTGCAG 2 cut(s) 425, 1322
Bsh1236I CGCG 1 cut(s) 449
BshFI GGCC 2 cut(s) 1285, 1434
BsiHKAI GWGCWC 3 cut(s) 215, 622, 1254
BslFI GGGAC 1 cut(s) 1477
BslI CCNNNNNNNGG 1 cut(s) 1128
BsmFI GGGAC 1 cut(s) 1477
BsnI GGCC 2 cut(s) 1285, 1434
Bsp1286I GDGCHC 5 cut(s) 215, 622, 675, 1134, 1254
Bsp143I GATC 3 cut(s) 115, 241, 959
Bsp19I CCATGG 2 cut(s) 933, 970
BspACI CCGC 2 cut(s) 1424, 1487
BspANI GGCC 2 cut(s) 1285, 1434
BspCNI CTCAG 1 cut(s) 1447
BspFNI CGCG 1 cut(s) 449
BspHI TCATGA 3 cut(s) 207, 460, 1065
BspLI GGNNCC 5 cut(s) 117, 372, 846, 1120, 1554
BspMAI CTGCAG 1 cut(s) 656
BspPI GGATC 3 cut(s) 110, 123, 967
BsrI ACTGG 3 cut(s) 433, 728, 848
BssECI CCNNGG 3 cut(s) 933, 970, 1496
BssMI GATC 3 cut(s) 115, 241, 959
BssSI CACGAG 2 cut(s) 1166, 1467
BssT1I CCWWGG 2 cut(s) 933, 970
Bst2BI CACGAG 2 cut(s) 1166, 1467
Bst2UI CCWGG 1 cut(s) 1497
Bst4CI ACNGT 5 cut(s) 131, 406, 514, 758, 836
Bst6I CTCTTC 2 cut(s) 387, 587
BstBAI YACGTR 1 cut(s) 1255
BstDEI CTNAG 1 cut(s) 1455
BstDSI CCRYGG 2 cut(s) 933, 970
BstEII GGTNACC 1 cut(s) 608
BstF5I GGATG 4 cut(s) 11, 486, 943, 1465
BstFNI CGCG 1 cut(s) 449
BstKTI GATC 3 cut(s) 118, 244, 962
BstMBI GATC 3 cut(s) 115, 241, 959
BstMWI GCNNNNNNNGC 1 cut(s) 1421
BstNI CCWGG 1 cut(s) 1497
BstNSI RCATGY 3 cut(s) 1150, 1321, 1482
BstPI GGTNACC 1 cut(s) 608
BstSCI CCNGG 1 cut(s) 1495
BstSFI CTRYAG 1 cut(s) 652
BstSLI GKGCMC 2 cut(s) 622, 1254
BstUI CGCG 1 cut(s) 449
BstV1I GCAGC 4 cut(s) 446, 666, 908, 1334
BstV2I GAAGAC 1 cut(s) 10
BstX2I RGATCY 2 cut(s) 115, 241
BstYI RGATCY 2 cut(s) 115, 241
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 2 cut(s) 1285, 1434
BtgI CCRYGG 2 cut(s) 933, 970
BtsCI GGATG 4 cut(s) 11, 486, 943, 1465
BtsI GCAGTG 3 cut(s) 437, 649, 808
BtsIMutI CAGTG 6 cut(s) 136, 155, 437, 649, 808, 1110
CaiI CAGNNNCTG 1 cut(s) 722
CciI TCATGA 3 cut(s) 207, 460, 1065
Cfr13I GGNCC 1 cut(s) 719
CseI GACGC 1 cut(s) 438
Csp6I GTAC 4 cut(s) 39, 388, 631, 800
CviQI GTAC 4 cut(s) 39, 388, 631, 800
DdeI CTNAG 1 cut(s) 1455
DpnI GATC 3 cut(s) 117, 243, 961
DpnII GATC 3 cut(s) 115, 241, 959
DraIII CACNNNGTG 1 cut(s) 1292
Eam1104I CTCTTC 2 cut(s) 387, 587
EarI CTCTTC 2 cut(s) 387, 587
Ecl136II GAGCTC 1 cut(s) 213
Eco130I CCWWGG 2 cut(s) 933, 970
Eco24I GRGCYC 3 cut(s) 215, 675, 1134
Eco32I GATATC 1 cut(s) 1034
Eco47I GGWCC 1 cut(s) 719
Eco53kI GAGCTC 1 cut(s) 213
Eco91I GGTNACC 1 cut(s) 608
EcoICRI GAGCTC 1 cut(s) 213
EcoO109I RGGNCCY 1 cut(s) 719
EcoO65I GGTNACC 1 cut(s) 608
EcoRI GAATTC 1 cut(s) 253
EcoRII CCWGG 1 cut(s) 1495
EcoRV GATATC 1 cut(s) 1034
EcoT14I CCWWGG 2 cut(s) 933, 970
EcoT38I GRGCYC 3 cut(s) 215, 675, 1134
ErhI CCWWGG 2 cut(s) 933, 970
FalI AAGNNNNNCTT 2 cut(s) 1044, 1076
FaqI GGGAC 1 cut(s) 1477
FauI CCCGC 1 cut(s) 1480
FauNDI CATATG 1 cut(s) 110
FblI GTMKAC 2 cut(s) 186, 285
Fnu4HI GCNGC 4 cut(s) 435, 655, 897, 1348
FokI GGATG 4 cut(s) 18, 473, 950, 1472
FriOI GRGCYC 3 cut(s) 215, 675, 1134
Fsp4HI GCNGC 4 cut(s) 435, 655, 897, 1348
FspBI CTAG 3 cut(s) 330, 1281, 1421
GluI GCNGC 4 cut(s) 435, 655, 897, 1348
GsuI CTGGAG 1 cut(s) 450
HaeIII GGCC 2 cut(s) 1285, 1434
HgaI GACGC 1 cut(s) 438
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HinfI GANTC 4 cut(s) 681, 784, 870, 1465
HphI GGTGA 4 cut(s) 620, 995, 1067, 1304
Hpy188I TCNGA 7 cut(s) 180, 351, 869, 1051, 1103, 1180, 1236
Hpy188III TCNNGA 8 cut(s) 208, 368, 461, 574, 626, 1037, 1066, 1440
HpyAV CCTTC 6 cut(s) 79, 299, 488, 635, 890, 1536
HpyCH4III ACNGT 5 cut(s) 131, 406, 514, 758, 836
HpyCH4IV ACGT 1 cut(s) 1254
HpyCH4V TGCA 9 cut(s) 230, 442, 529, 620, 654, 1110, 1252, 1339, 1350
HpyF10VI GCNNNNNNNGC 1 cut(s) 1421
HpyF3I CTNAG 1 cut(s) 1455
HpySE526I ACGT 1 cut(s) 1254
Kzo9I GATC 3 cut(s) 115, 241, 959
LmnI GCTCC 2 cut(s) 370, 431
Lsp1109I GCAGC 4 cut(s) 446, 666, 908, 1334
LweI GCATC 3 cut(s) 22, 996, 1180
MaeI CTAG 3 cut(s) 330, 1281, 1421
MaeII ACGT 1 cut(s) 1254
MaeIII GTNAC 4 cut(s) 145, 608, 645, 1011
MalI GATC 3 cut(s) 117, 243, 961
MboI GATC 3 cut(s) 115, 241, 959
MboII GAAGA 6 cut(s) 10, 374, 545, 604, 1015, 1052
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 2 cut(s) 115, 241
MhlI GDGCHC 5 cut(s) 215, 622, 675, 1134, 1254
MluI ACGCGT 1 cut(s) 447
MlyI GAGTC 1 cut(s) 1459
MmeI TCCRAC 3 cut(s) 712, 847, 1081
MnlI CCTC 9 cut(s) 390, 412, 500, 633, 722, 941, 1220, 1365, 1450
MroXI GAANNNNTTC 1 cut(s) 1407
MseI TTAA 9 cut(s) 338, 425, 692, 770, 875, 1056, 1187, 1224, 1325
MslI CAYNNNNRTG 4 cut(s) 30, 129, 1316, 1371
MspA1I CMGCKG 1 cut(s) 899
MspR9I CCNGG 1 cut(s) 1497
MunI CAATTG 1 cut(s) 888
MvaI CCWGG 1 cut(s) 1497
MvnI CGCG 1 cut(s) 449
MwoI GCNNNNNNNGC 1 cut(s) 1421
NcoI CCATGG 2 cut(s) 933, 970
NdeI CATATG 1 cut(s) 110
NdeII GATC 3 cut(s) 115, 241, 959
NlaIV GGNNCC 5 cut(s) 117, 372, 846, 1120, 1554
NmuCI GTSAC 2 cut(s) 608, 1011
NspI RCATGY 3 cut(s) 1150, 1321, 1482
PagI TCATGA 3 cut(s) 207, 460, 1065
PciI ACATGT 2 cut(s) 1146, 1478
PdmI GAANNNNTTC 1 cut(s) 1407
PfeI GAWTC 3 cut(s) 681, 784, 870
PkrI GCNGC 4 cut(s) 436, 656, 898, 1349
PleI GAGTC 1 cut(s) 1459
PpsI GAGTC 1 cut(s) 1459
Ppu21I YACGTR 1 cut(s) 1255
PpuMI RGGWCCY 1 cut(s) 719
PscI ACATGT 2 cut(s) 1146, 1478
PshBI ATTAAT 1 cut(s) 1187
Psp124BI GAGCTC 1 cut(s) 215
Psp5II RGGWCCY 1 cut(s) 719
Psp6I CCWGG 1 cut(s) 1495
PspEI GGTNACC 1 cut(s) 608
PspGI CCWGG 1 cut(s) 1495
PspN4I GGNNCC 5 cut(s) 117, 372, 846, 1120, 1554
PspPI GGNCC 1 cut(s) 719
PspPPI RGGWCCY 1 cut(s) 719
PstI CTGCAG 1 cut(s) 656
PstNI CAGNNNCTG 1 cut(s) 722
PsuI RGATCY 2 cut(s) 115, 241
PvuII CAGCTG 1 cut(s) 899
RsaI GTAC 4 cut(s) 40, 389, 632, 801
RsaNI GTAC 4 cut(s) 39, 388, 631, 800
RseI CAYNNNNRTG 4 cut(s) 30, 129, 1316, 1371
SacI GAGCTC 1 cut(s) 215
SaqAI TTAA 9 cut(s) 338, 425, 692, 770, 875, 1056, 1187, 1224, 1325
SatI GCNGC 4 cut(s) 435, 655, 897, 1348
Sau3AI GATC 3 cut(s) 115, 241, 959
Sau96I GGNCC 1 cut(s) 719
ScaI AGTACT 1 cut(s) 632
SchI GAGTC 1 cut(s) 1459
ScrFI CCNGG 1 cut(s) 1497
SduI GDGCHC 5 cut(s) 215, 622, 675, 1134, 1254
SfaNI GCATC 3 cut(s) 22, 996, 1180
SfcI CTRYAG 1 cut(s) 652
SinI GGWCC 1 cut(s) 719
SmiMI CAYNNNNRTG 4 cut(s) 30, 129, 1316, 1371
SmlI CTYRAG 2 cut(s) 624, 990
SmoI CTYRAG 2 cut(s) 624, 990
SsiI CCGC 2 cut(s) 1424, 1487
SspI AATATT 1 cut(s) 278
SspMI CTAG 3 cut(s) 330, 1281, 1421
SstI GAGCTC 1 cut(s) 215
StyD4I CCNGG 1 cut(s) 1495
StyI CCWWGG 2 cut(s) 933, 970
TaaI ACNGT 5 cut(s) 131, 406, 514, 758, 836
TaiI ACGT 1 cut(s) 1257
TaqI TCGA 2 cut(s) 165, 401
TatI WGTACW 3 cut(s) 387, 630, 799
TfiI GAWTC 3 cut(s) 681, 784, 870
Tru1I TTAA 9 cut(s) 338, 425, 692, 770, 875, 1056, 1187, 1224, 1325
Tru9I TTAA 9 cut(s) 338, 425, 692, 770, 875, 1056, 1187, 1224, 1325
TscAI CASTG 6 cut(s) 136, 162, 444, 656, 815, 1117
TseFI GTSAC 2 cut(s) 608, 1011
TseI GCWGC 4 cut(s) 434, 654, 896, 1347
Tsp45I GTSAC 2 cut(s) 608, 1011
TspDTI ATGAA 8 cut(s) 97, 279, 550, 1034, 1155, 1300, 1416, 1518
TspGWI ACGGA 2 cut(s) 600, 1131
TspRI CASTG 6 cut(s) 136, 162, 444, 656, 815, 1117
VneI GTGCAC 2 cut(s) 618, 1250
VpaK11BI GGWCC 1 cut(s) 719
VspI ATTAAT 1 cut(s) 1187
XapI RAATTY 2 cut(s) 253, 1040
XceI RCATGY 3 cut(s) 1150, 1321, 1482
XmiI GTMKAC 2 cut(s) 186, 285
XmnI GAANNNNTTC 1 cut(s) 1407
XspI CTAG 3 cut(s) 330, 1281, 1421
ZrmI AGTACT 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.