RchiOBHm_Chr2g0141681

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000083
Physical Location & Seq
Reverse (-)
59225733 .. 59230113
4381 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51194

Sequence Viewer

Length: 1767 bp
ATGTTGCCGACATTCAATCAGTTCATCTTTTCACTACTACTTCTTTGGTTTGCTCTTAATCTTCTGCTCCTTGTTCATGCACAGGATGATCAGTCAGCTGGCTTCATTAGCATAGATTGTGGCAAATCGGGTTCTAGCTATACTGAAAAAGTTACTGGAATTACTTACATTTCGGACTCAAACTTCGTCGACACAGGTGAAAGTAACTTCATTTTGGATAAATATTTGGATGCCTATCAACAGCCATACCAATCTCTCAGGAGCTTCCCTCAAGGCATCAGGAACTGCTACAAAATAAACATTAGAAGTGGAACGAAATATTTGATCCGAGCAGTGTTCGTGTATGGGAATTATGATGGGCAGGACAAGTTACCAAAATTTGATCTGTATGTTGGACCAAATTTGTGGGATTCAGTGAAGCTTATGAATGCATCCATTGGCGTAACCAAGGAGCTCATACATTATGTTCCAAGACCAAGAAACTATATACAACTTTGTCTGGTGAACAAGCTCTCTGGAATTCCATTTATATCAGCAATAGAGTTGAGGCCTCTTCCCAACTCAACTTATTCAACTGAAGAGGGGTCATTGGCACTTGTCTCACGGTTTGACACTGGTCAAATAGCCCCTACTTTGACAAAATACAGGTATCCGTTCGATATCCTCGATCGCTTCTGGTATCCGTACGATAGTGACTGGAATAATTGGACGCAATTGAGTGCCTCAACCAACACAAGCTCGGCTTTTATGCCATCTACGCGTTCTGGTACTGACTCTGATTATAAATTACCTTTCGTGGTTATGAATACTGCTGCCACGCCCAGAAATAGGAATGGTGCATTGAATAATTTCTGGCCGCCTGAAGCTAAAAATGGACAGTATTACATTTACTTGCACTTGGCTGAAGTTGAAAGACTCCAAAGCATGTGCAACCAGTCCAGGCAATTCAAGATGACTATGTATGGAAGACTATTATTTGGGCCATATGTTCCTCAATATTACATGAGTGAAACTTTTTATAACCGTAAGGCTCTAAGTGGAGGACAAGAGAATTTTACAATCTCCATGACTGGTAATGCTACCCTTCCGCCTATTCTCAATGCCTTCGAGATTTACATGCTAAAAAAGTTCTCAGAGTCAGAAACAAACCAAGAAGATGTTAGCACAATCACAAGAATCAAGTCGACTTATAAAATTATTACAAATAATTGGCAAGGAGATCCATGTGCACCTCAACATTACTCATGGGAAGGTCTAAATTGTAGCTATCAGGAAAGTGATGAGTCCCCACGAATCATATCCTTGAACCTATCAAACAACAATTTGACAGGACCAATTCCAAAGGTTTTGTCTCAACTGCCAAACTTAGTTTTCCTGGATTTGTCAAACAACAAATTAACTGGTCGAATTCCAGATATTTTCTCTCAAATGCCAAAGTTAAATATCTTAAACTTAGAGAACAACAAGCTCACAGGCTCTATTCCGGAAGGACTAATTCGAAGAATGAATAGCGGTTTCTTGTCATTAAGACTGTGCGAAAATCCAAATCTACTTGGAAATGTTACTTGCAAGAACAAGAAGAAGAATTTCCTCCTTCCCATAGCTATTTCAATTGTTGGAGTTTCAATCCTCTTCTCAATTTTAGCATTTATCTGGTGGAGCTGTGTGAGAAAAAGAAAACACAGTAAGACTTACAAATATTTGTTGATGTTCATCTTTTCTCTTCACAATATACAAGGAGAAATCACTACTACAAAAGTGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

588

Amino Acids

67.09

Weight (kDa)

9.04

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 38 - 373 1.3e-100 Malectin-like domain
LRR_4 PF12799 454 - 491 1.8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 783, 1020, 1191
AccI GTMKAC 2 cut(s) 189, 1184
AccII CGCG 1 cut(s) 760
AccIII TCCGGA 1 cut(s) 1483
AciI CCGC 3 cut(s) 857, 1088, 1512
AclWI GGATC 2 cut(s) 319, 1214
AcoI YGGCCR 1 cut(s) 854
AcsI RAATTY 6 cut(s) 377, 400, 519, 1051, 1407, 1585
AcuI CTGAAG 3 cut(s) 597, 882, 924
AfaI GTAC 2 cut(s) 686, 769
AfiI CCNNNNNNNGG 1 cut(s) 828
AflIII ACRYGT 1 cut(s) 758
AgsI TTSAA 8 cut(s) 16, 573, 844, 911, 949, 1306, 1611, 1626
AjnI CCWGG 2 cut(s) 938, 1374
Alw21I GWGCWC 2 cut(s) 456, 1231
Alw26I GTCTC 2 cut(s) 604, 1356
Alw44I GTGCAC 1 cut(s) 1227
AlwI GGATC 2 cut(s) 319, 1214
AlwNI CAGNNNCTG 1 cut(s) 285
Aor13HI TCCGGA 1 cut(s) 1483
AoxI GGCC 4 cut(s) 548, 854, 980, 1761
ApaLI GTGCAC 1 cut(s) 1227
ApeKI GCWGC 1 cut(s) 812
ApoI RAATTY 6 cut(s) 377, 400, 519, 1051, 1407, 1585
ArsI GACNNNNNNTTYG 4 cut(s) 167, 199, 1334, 1366
Asp700I GAANNNNTTC 2 cut(s) 848, 1586
AspS9I GGNCC 3 cut(s) 395, 980, 1331
AsuHPI GGTGA 2 cut(s) 209, 514
AsuII TTCGAA 1 cut(s) 1498
AvaII GGWCC 2 cut(s) 395, 1331
BaeGI GKGCMC 1 cut(s) 1231
BanII GRGCYC 1 cut(s) 456
BbsI GAAGAC 1 cut(s) 973
Bbv12I GWGCWC 2 cut(s) 456, 1231
BbvI GCAGC 1 cut(s) 799
BccI CCATC 2 cut(s) 350, 760
BciT130I CCWGG 2 cut(s) 940, 1376
BciVI GTATCC 2 cut(s) 660, 690
BclI TGATCA 1 cut(s) 88
BcoDI GTCTC 2 cut(s) 604, 1356
BfaI CTAG 1 cut(s) 135
BfuI GTATCC 2 cut(s) 660, 690
BisI GCNGC 2 cut(s) 813, 857
BlsI GCNGC 2 cut(s) 814, 858
Bme1390I CCNGG 2 cut(s) 940, 1376
Bme18I GGWCC 2 cut(s) 395, 1331
BmgT120I GGNCC 3 cut(s) 395, 980, 1331
BmrFI CCNGG 2 cut(s) 940, 1376
BmsI GCATC 3 cut(s) 220, 285, 440
BoxI GACNNNNGTC 1 cut(s) 615
BpiI GAAGAC 1 cut(s) 973
BplI GAGNNNNNCTC 2 cut(s) 253, 285
Bpu14I TTCGAA 1 cut(s) 1498
BpuEI CTTGAG 1 cut(s) 255
BsaBI GATNNNNATC 2 cut(s) 234, 1712
BsaJI CCNNGG 1 cut(s) 447
BsaWI WCCGGW 1 cut(s) 1483
Bsc4I CCNNNNNNNGG 1 cut(s) 828
Bse1I ACTGG 6 cut(s) 160, 619, 701, 934, 1075, 1405
Bse8I GATNNNNATC 2 cut(s) 234, 1712
BseAI TCCGGA 1 cut(s) 1483
BseBI CCWGG 2 cut(s) 940, 1376
BseDI CCNNGG 1 cut(s) 447
BseGI GGATG 3 cut(s) 91, 235, 431
BseJI GATNNNNATC 2 cut(s) 234, 1712
BseLI CCNNNNNNNGG 1 cut(s) 828
BseMII CTCAG 2 cut(s) 271, 1146
BseNI ACTGG 6 cut(s) 160, 619, 701, 934, 1075, 1405
BseSI GKGCMC 1 cut(s) 1231
BseXI GCAGC 1 cut(s) 799
Bsh1236I CGCG 1 cut(s) 760
Bsh1285I CGRYCG 1 cut(s) 670
BshFI GGCC 4 cut(s) 550, 856, 982, 1763
BsiEI CGRYCG 1 cut(s) 670
BsiHKAI GWGCWC 2 cut(s) 456, 1231
BsiSI CCGG 1 cut(s) 1484
BsiWI CGTACG 1 cut(s) 684
BslFI GGGAC 1 cut(s) 1270
BslI CCNNNNNNNGG 1 cut(s) 828
BsmAI GTCTC 2 cut(s) 604, 1356
BsmFI GGGAC 1 cut(s) 1270
BsmI GAATGC 1 cut(s) 433
BsnI GGCC 4 cut(s) 550, 856, 982, 1763
Bsp119I TTCGAA 1 cut(s) 1498
Bsp1286I GDGCHC 2 cut(s) 456, 1231
Bsp13I TCCGGA 1 cut(s) 1483
Bsp143I GATC 5 cut(s) 88, 324, 382, 667, 1219
BspACI CCGC 3 cut(s) 857, 1088, 1512
BspANI GGCC 4 cut(s) 550, 856, 982, 1763
BspCNI CTCAG 2 cut(s) 270, 1145
BspEI TCCGGA 1 cut(s) 1483
BspFNI CGCG 1 cut(s) 760
BspPI GGATC 2 cut(s) 319, 1214
BspT104I TTCGAA 1 cut(s) 1498
BsrI ACTGG 6 cut(s) 160, 619, 701, 934, 1075, 1405
BssECI CCNNGG 1 cut(s) 447
BssMI GATC 5 cut(s) 88, 324, 382, 667, 1219
BssT1I CCWWGG 1 cut(s) 447
Bst2UI CCWGG 2 cut(s) 940, 1376
Bst4CI ACNGT 5 cut(s) 606, 879, 1025, 1533, 1685
Bst6I CTCTTC 4 cut(s) 558, 573, 1637, 1728
BstBI TTCGAA 1 cut(s) 1498
BstC8I GCNNGC 1 cut(s) 100
BstDEI CTNAG 5 cut(s) 257, 1034, 1132, 1366, 1453
BstF5I GGATG 3 cut(s) 91, 235, 431
BstFNI CGCG 1 cut(s) 760
BstKTI GATC 5 cut(s) 91, 327, 385, 670, 1222
BstMAI GTCTC 2 cut(s) 604, 1356
BstMBI GATC 5 cut(s) 88, 324, 382, 667, 1219
BstMCI CGRYCG 1 cut(s) 670
BstMWI GCNNNNNNNGC 2 cut(s) 108, 757
BstNI CCWGG 2 cut(s) 940, 1376
BstNSI RCATGY 2 cut(s) 928, 1120
BstPAI GACNNNNGTC 1 cut(s) 615
BstSCI CCNGG 2 cut(s) 938, 1374
BstSLI GKGCMC 1 cut(s) 1231
BstUI CGCG 1 cut(s) 760
BstV1I GCAGC 1 cut(s) 799
BstV2I GAAGAC 1 cut(s) 973
BstX2I RGATCY 1 cut(s) 1219
BstXI CCANNNNNNTGG 1 cut(s) 405
BstYI RGATCY 1 cut(s) 1219
BsuI GTATCC 2 cut(s) 660, 690
BsuRI GGCC 4 cut(s) 550, 856, 982, 1763
BtsCI GGATG 3 cut(s) 91, 235, 431
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 3 cut(s) 339, 420, 612
Cac8I GCNNGC 1 cut(s) 100
CaiI CAGNNNCTG 1 cut(s) 285
Cfr13I GGNCC 3 cut(s) 395, 980, 1331
CseI GACGC 1 cut(s) 718
Csp6I GTAC 2 cut(s) 685, 768
CviAII CATG 7 cut(s) 77, 925, 1003, 1066, 1117, 1224, 1245
CviQI GTAC 2 cut(s) 685, 768
DdeI CTNAG 5 cut(s) 257, 1034, 1132, 1366, 1453
DpnI GATC 5 cut(s) 90, 326, 384, 669, 1221
DpnII GATC 5 cut(s) 88, 324, 382, 667, 1219
EaeI YGGCCR 1 cut(s) 854
Eam1104I CTCTTC 4 cut(s) 558, 573, 1637, 1728
EarI CTCTTC 4 cut(s) 558, 573, 1637, 1728
EciI GGCGGA 1 cut(s) 1077
Ecl136II GAGCTC 1 cut(s) 454
Eco130I CCWWGG 1 cut(s) 447
Eco147I AGGCCT 1 cut(s) 550
Eco24I GRGCYC 1 cut(s) 456
Eco32I GATATC 1 cut(s) 661
Eco47I GGWCC 2 cut(s) 395, 1331
Eco53kI GAGCTC 1 cut(s) 454
Eco57I CTGAAG 3 cut(s) 597, 882, 924
EcoICRI GAGCTC 1 cut(s) 454
EcoRI GAATTC 2 cut(s) 519, 1407
EcoRII CCWGG 2 cut(s) 938, 1374
EcoRV GATATC 1 cut(s) 661
EcoT14I CCWWGG 1 cut(s) 447
EcoT22I ATGCAT 1 cut(s) 433
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 1 cut(s) 447
FaeI CATG 7 cut(s) 80, 928, 1006, 1069, 1120, 1227, 1248
FalI AAGNNNNNCTT 2 cut(s) 727, 759
FaqI GGGAC 1 cut(s) 1270
FatI CATG 7 cut(s) 76, 924, 1002, 1065, 1116, 1223, 1244
FauNDI CATATG 1 cut(s) 985
FbaI TGATCA 1 cut(s) 88
FblI GTMKAC 2 cut(s) 189, 1184
Fnu4HI GCNGC 2 cut(s) 813, 857
FokI GGATG 3 cut(s) 98, 242, 418
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 2 cut(s) 813, 857
FspBI CTAG 1 cut(s) 135
GluI GCNGC 2 cut(s) 813, 857
HaeIII GGCC 4 cut(s) 550, 856, 982, 1763
HapII CCGG 1 cut(s) 1484
HgaI GACGC 1 cut(s) 718
Hin1II CATG 7 cut(s) 80, 928, 1006, 1069, 1120, 1227, 1248
HincII GTYRAC 2 cut(s) 190, 1185
HindII GTYRAC 2 cut(s) 190, 1185
HindIII AAGCTT 1 cut(s) 419
HinfI GANTC 8 cut(s) 176, 410, 773, 915, 1136, 1176, 1283, 1293
HpaII CCGG 1 cut(s) 1484
HphI GGTGA 2 cut(s) 209, 514
Hpy166II GTNNAC 4 cut(s) 190, 505, 1185, 1229
Hpy188I TCNGA 5 cut(s) 175, 329, 778, 1135, 1141
Hpy188III TCNNGA 8 cut(s) 259, 280, 516, 949, 1108, 1271, 1412, 1484
Hpy8I GTNNAC 4 cut(s) 190, 505, 1185, 1229
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 5 cut(s) 1094, 1114, 1244, 1481, 1604
HpyCH4III ACNGT 5 cut(s) 606, 879, 1025, 1533, 1685
HpyCH4V TGCA 7 cut(s) 80, 431, 839, 895, 930, 1229, 1569
HpyF10VI GCNNNNNNNGC 2 cut(s) 108, 757
HpyF3I CTNAG 5 cut(s) 257, 1034, 1132, 1366, 1453
Hsp92II CATG 7 cut(s) 80, 928, 1006, 1069, 1120, 1227, 1248
Kpn2I TCCGGA 1 cut(s) 1483
Ksp22I TGATCA 1 cut(s) 88
Kzo9I GATC 5 cut(s) 88, 324, 382, 667, 1219
LmnI GCTCC 4 cut(s) 72, 261, 451, 1659
Lsp1109I GCAGC 1 cut(s) 799
LweI GCATC 3 cut(s) 220, 285, 440
MaeI CTAG 1 cut(s) 135
MaeIII GTNAC 6 cut(s) 151, 203, 369, 442, 692, 1561
MalI GATC 5 cut(s) 90, 326, 384, 669, 1221
MboI GATC 5 cut(s) 88, 324, 382, 667, 1219
MfeI CAATTG 2 cut(s) 713, 1611
MflI RGATCY 1 cut(s) 1219
MhlI GDGCHC 2 cut(s) 456, 1231
MluI ACGCGT 1 cut(s) 758
MlyI GAGTC 5 cut(s) 170, 767, 909, 1145, 1292
MmeI TCCRAC 2 cut(s) 373, 1597
Mph1103I ATGCAT 1 cut(s) 433
MroI TCCGGA 1 cut(s) 1483
MroXI GAANNNNTTC 2 cut(s) 848, 1586
MseI TTAA 5 cut(s) 57, 1397, 1439, 1448, 1526
MspA1I CMGCKG 1 cut(s) 98
MspI CCGG 1 cut(s) 1484
MspR9I CCNGG 2 cut(s) 940, 1376
MunI CAATTG 2 cut(s) 713, 1611
Mva1269I GAATGC 1 cut(s) 433
MvaI CCWGG 2 cut(s) 940, 1376
MvnI CGCG 1 cut(s) 760
MwoI GCNNNNNNNGC 2 cut(s) 108, 757
NdeI CATATG 1 cut(s) 985
NdeII GATC 5 cut(s) 88, 324, 382, 667, 1219
NlaIII CATG 7 cut(s) 80, 928, 1006, 1069, 1120, 1227, 1248
NmeAIII GCCGAG 1 cut(s) 719
NmuCI GTSAC 1 cut(s) 692
NsiI ATGCAT 1 cut(s) 433
NspI RCATGY 2 cut(s) 928, 1120
NspV TTCGAA 1 cut(s) 1498
PceI AGGCCT 1 cut(s) 550
PcsI WCGNNNNNNNCGW 1 cut(s) 663
PctI GAATGC 1 cut(s) 433
PdmI GAANNNNTTC 2 cut(s) 848, 1586
PfeI GAWTC 3 cut(s) 410, 1176, 1293
Pfl23II CGTACG 1 cut(s) 684
PfoI TCCNGGA 1 cut(s) 1374
PkrI GCNGC 2 cut(s) 814, 858
Ple19I CGATCG 1 cut(s) 670
PleI GAGTC 5 cut(s) 170, 767, 909, 1144, 1291
PpsI GAGTC 5 cut(s) 170, 767, 909, 1144, 1291
PshAI GACNNNNGTC 1 cut(s) 615
PsiI TTATAA 3 cut(s) 783, 1020, 1191
Psp124BI GAGCTC 1 cut(s) 456
Psp6I CCWGG 2 cut(s) 938, 1374
PspGI CCWGG 2 cut(s) 938, 1374
PspLI CGTACG 1 cut(s) 684
PspPI GGNCC 3 cut(s) 395, 980, 1331
PstNI CAGNNNCTG 1 cut(s) 285
PsuI RGATCY 1 cut(s) 1219
PvuI CGATCG 1 cut(s) 670
PvuII CAGCTG 1 cut(s) 98
RsaI GTAC 2 cut(s) 686, 769
RsaNI GTAC 2 cut(s) 685, 768
SacI GAGCTC 1 cut(s) 456
SalI GTCGAC 2 cut(s) 188, 1183
SaqAI TTAA 5 cut(s) 57, 1397, 1439, 1448, 1526
SatI GCNGC 2 cut(s) 813, 857
Sau3AI GATC 5 cut(s) 88, 324, 382, 667, 1219
Sau96I GGNCC 3 cut(s) 395, 980, 1331
SchI GAGTC 5 cut(s) 170, 767, 909, 1145, 1292
ScrFI CCNGG 2 cut(s) 940, 1376
SduI GDGCHC 2 cut(s) 456, 1231
SfaNI GCATC 3 cut(s) 220, 285, 440
SfuI TTCGAA 1 cut(s) 1498
SinI GGWCC 2 cut(s) 395, 1331
SmlI CTYRAG 1 cut(s) 270
SmoI CTYRAG 1 cut(s) 270
SseBI AGGCCT 1 cut(s) 550
SsiI CCGC 3 cut(s) 857, 1088, 1512
SspI AATATT 4 cut(s) 224, 320, 998, 1700
SspMI CTAG 1 cut(s) 135
SstI GAGCTC 1 cut(s) 456
StuI AGGCCT 1 cut(s) 550
StyD4I CCNGG 2 cut(s) 938, 1374
StyI CCWWGG 1 cut(s) 447
TaaI ACNGT 5 cut(s) 606, 879, 1025, 1533, 1685
TaqI TCGA 7 cut(s) 189, 657, 666, 1107, 1184, 1405, 1498
TauI GCSGC 1 cut(s) 859
TfiI GAWTC 3 cut(s) 410, 1176, 1293
Tru1I TTAA 5 cut(s) 57, 1397, 1439, 1448, 1526
Tru9I TTAA 5 cut(s) 57, 1397, 1439, 1448, 1526
TscAI CASTG 3 cut(s) 339, 420, 619
TseFI GTSAC 1 cut(s) 692
TseI GCWGC 1 cut(s) 812
Tsp45I GTSAC 1 cut(s) 692
TspDTI ATGAA 8 cut(s) 13, 65, 94, 199, 440, 818, 1520, 1702
TspGWI ACGGA 2 cut(s) 642, 672
TspRI CASTG 3 cut(s) 339, 420, 619
VneI GTGCAC 1 cut(s) 1227
VpaK11BI GGWCC 2 cut(s) 395, 1331
XapI RAATTY 6 cut(s) 377, 400, 519, 1051, 1407, 1585
XceI RCATGY 2 cut(s) 928, 1120
XmiI GTMKAC 2 cut(s) 189, 1184
XmnI GAANNNNTTC 2 cut(s) 848, 1586
XspI CTAG 1 cut(s) 135
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.