Prupe.3G056100_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3986835 .. 3990798
3964 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G056100.1

Sequence Viewer

Length: 2595 bp
ATGTCACGGACATTCAAGTCACTCCTCTTTCCACTGCTTGGTGGTTTTGCTCTTATGCTCCTAGTTCATGCCCAGGATGAATCAGGCTTCATTAGCATAGACTGCGGCCTTGCAGGAAATTCTAGCTATACTGAAAAGACAACAGGCATTAACTACACCTCAGACACAAACTTCATAGACACTGGTGAAGTTAAATTTGTATCACATGATTACAAGAACGAATATCAACAACAATATTGGTCTGTTAGGAGCTTCCCTGAAGGAATACGAAACTGCTACAAAATAAATGTTACGAGCGGCAGCAAGTATTTGATCCGAGCAAGTTTCCTGTATGGAAACTATGATGGCCAAAATAAATTCGCAGAATTCGAACTACATCTTGGACCAAATTTGTGGGATTATGTGAAATTCGGGGAGTATGGCGTAGATTTTGAGCTCATACATATTCCCTTGCGAAATTACATGCATATATGTCTTGTGAACACAGGATCCGGGGTTCCATTTATATCAACAATAGAGATAAGGCCTCTACTTAATGAAACTTATCAGACACAAGTGGGGTCTTTGGCACTTGTCTCGCGGTACGACACTGGTGCTTTAGCAGCCACTTTTGAAGGATATAGGTATCCAAAAGATATTCATGATCGCTTCTGGTATATCTATGCCCGCGATGATTGGACACAGATAAATACCTCACTCACCGTTAACCCTGGATTGTTTTACAAGCCACCATCTGATGTCATGCGCACTGCTGCCACCCCGAAAAGTGCAAGTGGCTCCTTGGATTTCTCCTGGAAGCCAGTGGATAAAAATTCAGAATATTATGTTTACATGCACTTTGCAGAAGTTGAAAAGCTCAAAACTAACCATTCTAGACAGCAGTATGTGACTAAGAACGGAGTGCTCTTTCAAGAGCTTTTTTCTCCTGAATACTTGTACACTAGAACTCTTTTCACCCGTTTGGCTATTGGTGGAGAAGTACAATATAATTTTTCAATCTTTGCGGCTGAGAACTCTACCCTTAAACCCATCGTCAATGCCATTGAGCTTTACATGGTAAAAGAATTCTTAGAATCAGAGACAAATGAAGAAGATTTTGACGCAATCACAAACATCAAGTCAACTTATAAAGTTACTAAGAACTGGCAAGGAGATCCATGTGCCCCTGAAGTTTTCTTGTGGAATGGTCTAAACTGTAGCTATCGTGAAAATGAGACCCCAAGAATCACATCCTTGAACTTGTCCTCGAACGGATTAACAGGGGAGATAGCTCTTTCCATAGCCAACCTAACAATGATACAGACACTGGATTTATCAAACAACAGCTTGACAGGACAAATTCCTGATTTTTTGTCTCAATTGCCAAATTTAAATGTCTTGAACTTGGAGAAAAACAAACTCACAGGCCCAGTTCCTGTAGGACTCATTGAAAGAAGAAACAATGGCTTGCTATCATTAAGTTTGTGTGGAAATCTAAACATGCCCGAACAAGTTTCTTGCGAAAAGAAGGAGACGAAAAAGAGGACACAGAATTCCAATATTGTTCCCATAGTTGTGCCAATCGTTGGAATATCAATCCTCTTATTATCTGTGGCAGCTATCTGGTTGGGGATTAAAAGGAGAAGACAAAATGCCACCATTGGGTCCTTGGAGTCAAGAAAGCGACAGTTTTCGTACTCTGAGATACTGAACATCACCAACAACTTAGAGAAGACTCTTGGAAAAGGGGGGTTTGGAACAGTTTATTATGGATGCATAGACAAAACTGAAGTAGCTGTCAAGATGCTTTCTCCATCATCAGTTCAAGGGCCTCAACAATTTCATGCAGAGGTTGATCTTCTTCTGAGAGTTCACCATATAAACTTGATAAGCCTTGTAGGATATTGCAATGATAAGACCAACAAGGGGCTCGTTTACGAGTACATGGCCAATGGAAACTTACAAAAACATCTTGCAGGTAGCAGTTCAAATGTCTTGACTTGGGAAGGTAGACTTCAAATAGCAATAGAGGCTGCCCAAGGATTGGAATATATGCACCATGGTTGTACACCACCTATGATCCACAGGGATGTCAAATCATCCAACATCTTGCTGAATGAAAATTTCCAAGCCAAGATATCTGATTTTGGCCTATCTAGAAATTTTACTGAGGAGGATGGTACTCATATACTCACAGGTGTTGCTGGCACTCCTGGGTACCTTGCCCCCGAGTACCACGACTCAAACAGGCTAAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTACTGTTGGAGATCATCACAGGTCGACCTGTTTATTCAAACACACATGATGAGAGAATTCACATAAGTAACTGGGTTGCTTTCCTGCTTTCGAATGGGGACATTTCCGGTATTGTTGATCGGAGGTTAGAGGGAAGTTTCAATGTAAACTCTGTCTGGAAAGCTGTGGAAATAGCAACATCATGTACATCAGCAGATGCCATCAAAAGGCCGACCATGAGTGAGGTAGTGATGGGAATAAGGGAATGTTTGGCAACAGAACTAGCTCAAACAAATCAGACTGGCATTGAAACTAATTTAGTACCTATGGAAAGCCCCTCAGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

865

Amino Acids

96.92

Weight (kDa)

5.88

Isoelectric Point (pI)

40.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1128
AasI GACNNNNNNGTC 1 cut(s) 16
Acc16I TGCGCA 1 cut(s) 746
Acc36I ACCTGC 1 cut(s) 1946
Acc65I GGTACC 1 cut(s) 2196
AccB1I GGYRCC 1 cut(s) 2196
AccB7I CCANNNNNTGG 3 cut(s) 38, 1565, 2023
AccBSI CCGCTC 1 cut(s) 297
AccI GTMKAC 2 cut(s) 1990, 2290
AccII CGCG 2 cut(s) 580, 669
AciI CCGC 5 cut(s) 105, 297, 580, 667, 1004
AclWI GGATC 5 cut(s) 307, 483, 496, 1148, 2053
AcoI YGGCCR 2 cut(s) 346, 1926
AcuI CTGAAG 3 cut(s) 279, 1188, 1788
AfiI CCNNNNNNNGG 7 cut(s) 38, 1565, 1641, 1905, 2023, 2472, 2589
AjnI CCWGG 4 cut(s) 72, 709, 791, 2191
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AloI GAACNNNNNNTCC 4 cut(s) 473, 480, 505, 512
Alw21I GWGCWC 2 cut(s) 438, 906
Alw26I GTCTC 5 cut(s) 580, 1073, 1208, 1359, 1505
AlwI GGATC 5 cut(s) 307, 483, 496, 1148, 2053
AlwNI CAGNNNCTG 2 cut(s) 1306, 1415
Ama87I CYCGRG 1 cut(s) 2207
AoxI GGCC 8 cut(s) 106, 346, 524, 1405, 1808, 1926, 2128, 2474
ApeKI GCWGC 5 cut(s) 300, 602, 752, 1595, 2012
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
Asp718I GGTACC 1 cut(s) 2196
AspLEI GCGC 1 cut(s) 747
AspS9I GGNCC 4 cut(s) 383, 1406, 1644, 1808
AsuC2I CCSGG 1 cut(s) 493
AsuHPI GGTGA 5 cut(s) 197, 691, 946, 1687, 1844
AsuII TTCGAA 2 cut(s) 369, 2357
AvaI CYCGRG 1 cut(s) 2207
AvaII GGWCC 2 cut(s) 383, 1644
BaeGI GKGCMC 1 cut(s) 1165
BalI TGGCCA 2 cut(s) 348, 1928
BamHI GGATCC 1 cut(s) 488
BanI GGYRCC 1 cut(s) 2196
BanII GRGCYC 2 cut(s) 438, 1911
BbsI GAAGAC 2 cut(s) 1630, 1718
Bbv12I GWGCWC 2 cut(s) 438, 906
BbvI GCAGC 5 cut(s) 312, 614, 739, 1607, 1999
BccI CCATC 7 cut(s) 338, 739, 1037, 1801, 2150, 2474, 2491
BcgI CGANNNNNNTGC 4 cut(s) 558, 575, 592, 609
BciT130I CCWGG 4 cut(s) 74, 711, 793, 2193
BciVI GTATCC 1 cut(s) 636
BcnI CCSGG 1 cut(s) 493
BcoDI GTCTC 5 cut(s) 580, 1073, 1208, 1359, 1505
BfaI CTAG 6 cut(s) 62, 123, 873, 942, 2136, 2528
BfmI CTRYAG 2 cut(s) 1195, 1416
BfuAI ACCTGC 1 cut(s) 1946
BfuI GTATCC 1 cut(s) 636
BisI GCNGC 8 cut(s) 106, 298, 301, 603, 753, 1005, 1596, 2013
BlsI GCNGC 8 cut(s) 107, 299, 302, 604, 754, 1006, 1597, 2014
Bme1390I CCNGG 5 cut(s) 74, 493, 711, 793, 2193
Bme18I GGWCC 2 cut(s) 383, 1644
BmeT110I CYCGRG 1 cut(s) 2207
BmgT120I GGNCC 4 cut(s) 383, 1406, 1644, 1808
BmiI GGNNCC 5 cut(s) 490, 498, 778, 1645, 2198
BmrFI CCNGG 5 cut(s) 74, 493, 711, 793, 2193
BmrI ACTGGG 2 cut(s) 1403, 2347
BmsI GCATC 3 cut(s) 1742, 1773, 2452
BmuI ACTGGG 2 cut(s) 1403, 2347
BpiI GAAGAC 2 cut(s) 1630, 1718
Bpu14I TTCGAA 2 cut(s) 369, 2357
BpuMI CCSGG 1 cut(s) 493
BsaI GGTCTC 1 cut(s) 1208
BsaJI CCNNGG 8 cut(s) 72, 492, 709, 780, 1647, 2017, 2038, 2192
BsaWI WCCGGW 1 cut(s) 2372
Bsc4I CCNNNNNNNGG 7 cut(s) 38, 1565, 1641, 1905, 2023, 2472, 2589
Bse1I ACTGG 8 cut(s) 187, 595, 800, 1148, 1311, 1409, 2342, 2551
Bse3DI GCAATG 1 cut(s) 1894
BseBI CCWGG 4 cut(s) 74, 711, 793, 2193
BseDI CCNNGG 8 cut(s) 72, 492, 709, 780, 1647, 2017, 2038, 2192
BseGI GGATG 6 cut(s) 82, 1229, 1757, 2074, 2078, 2161
BseLI CCNNNNNNNGG 7 cut(s) 38, 1565, 1641, 1905, 2023, 2472, 2589
BseMI GCAATG 1 cut(s) 1894
BseMII CTCAG 5 cut(s) 174, 999, 1671, 1835, 2139
BseNI ACTGG 8 cut(s) 187, 595, 800, 1148, 1311, 1409, 2342, 2551
BseRI GAGGAG 2 cut(s) 14, 2165
BseSI GKGCMC 1 cut(s) 1165
BseXI GCAGC 5 cut(s) 312, 614, 739, 1607, 1999
Bsh1236I CGCG 2 cut(s) 580, 669
BshFI GGCC 8 cut(s) 108, 348, 526, 1407, 1810, 1928, 2130, 2476
BshNI GGYRCC 1 cut(s) 2196
BsiHKAI GWGCWC 2 cut(s) 438, 906
BsiHKCI CYCGRG 1 cut(s) 2207
BsiSI CCGG 2 cut(s) 492, 2373
BslFI GGGAC 1 cut(s) 2378
BslI CCNNNNNNNGG 7 cut(s) 38, 1565, 1641, 1905, 2023, 2472, 2589
BsmAI GTCTC 5 cut(s) 580, 1073, 1208, 1359, 1505
BsmBI CGTCTC 1 cut(s) 1505
BsmFI GGGAC 1 cut(s) 2378
BsnI GGCC 8 cut(s) 108, 348, 526, 1407, 1810, 1928, 2130, 2476
Bso31I GGTCTC 1 cut(s) 1208
BsoBI CYCGRG 1 cut(s) 2207
Bsp119I TTCGAA 2 cut(s) 369, 2357
Bsp1286I GDGCHC 4 cut(s) 438, 906, 1165, 1911
Bsp1407I TGTACA 3 cut(s) 936, 2045, 2450
Bsp143I GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
Bsp19I CCATGG 1 cut(s) 2038
BspACI CCGC 5 cut(s) 105, 297, 580, 667, 1004
BspANI GGCC 8 cut(s) 108, 348, 526, 1407, 1810, 1928, 2130, 2476
BspCNI CTCAG 5 cut(s) 173, 1000, 1672, 1836, 2140
BspFNI CGCG 2 cut(s) 580, 669
BspHI TCATGA 1 cut(s) 640
BspLI GGNNCC 5 cut(s) 490, 498, 778, 1645, 2198
BspMI ACCTGC 1 cut(s) 1946
BspPI GGATC 5 cut(s) 307, 483, 496, 1148, 2053
BspT104I TTCGAA 2 cut(s) 369, 2357
BspT107I GGYRCC 1 cut(s) 2196
BspTNI GGTCTC 1 cut(s) 1208
BsrBI CCGCTC 1 cut(s) 297
BsrDI GCAATG 1 cut(s) 1894
BsrGI TGTACA 3 cut(s) 936, 2045, 2450
BsrI ACTGG 8 cut(s) 187, 595, 800, 1148, 1311, 1409, 2342, 2551
BssECI CCNNGG 8 cut(s) 72, 492, 709, 780, 1647, 2017, 2038, 2192
BssMI GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
BssT1I CCWWGG 4 cut(s) 780, 1647, 2017, 2038
Bst2UI CCWGG 4 cut(s) 74, 711, 793, 2193
Bst4CI ACNGT 5 cut(s) 703, 1196, 1668, 1741, 2271
BstAPI GCANNNNNTGC 1 cut(s) 102
BstAUI TGTACA 3 cut(s) 936, 2045, 2450
BstBI TTCGAA 2 cut(s) 369, 2357
BstC8I GCNNGC 3 cut(s) 667, 1448, 2185
BstDSI CCRYGG 1 cut(s) 2038
BstENI CCTNNNNNAGG 1 cut(s) 2587
BstF5I GGATG 6 cut(s) 82, 1229, 1757, 2074, 2078, 2161
BstFNI CGCG 2 cut(s) 580, 669
BstHHI GCGC 1 cut(s) 747
BstKTI GATC 8 cut(s) 315, 491, 646, 1156, 1837, 2061, 2280, 2386
BstMAI GTCTC 5 cut(s) 580, 1073, 1208, 1359, 1505
BstMBI GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
BstMWI GCNNNNNNNGC 4 cut(s) 93, 102, 602, 2009
BstNI CCWGG 4 cut(s) 74, 711, 793, 2193
BstNSI RCATGY 3 cut(s) 466, 835, 1483
BstSCI CCNGG 5 cut(s) 72, 491, 709, 791, 2191
BstSFI CTRYAG 2 cut(s) 1195, 1416
BstSLI GKGCMC 1 cut(s) 1165
BstUI CGCG 2 cut(s) 580, 669
BstV1I GCAGC 5 cut(s) 312, 614, 739, 1607, 1999
BstV2I GAAGAC 2 cut(s) 1630, 1718
BstX2I RGATCY 2 cut(s) 488, 1153
BstXI CCANNNNNNTGG 1 cut(s) 393
BstYI RGATCY 2 cut(s) 488, 1153
BsuI GTATCC 1 cut(s) 636
BsuRI GGCC 8 cut(s) 108, 348, 526, 1407, 1810, 1928, 2130, 2476
BtgI CCRYGG 1 cut(s) 2038
BtgZI GCGATG 1 cut(s) 684
BtsCI GGATG 6 cut(s) 82, 1229, 1757, 2074, 2078, 2161
BtsI GCAGTG 2 cut(s) 32, 747
BtsIMutI CAGTG 6 cut(s) 32, 180, 588, 747, 807, 1304
BveI ACCTGC 1 cut(s) 1946
Cac8I GCNNGC 3 cut(s) 667, 1448, 2185
CaiI CAGNNNCTG 2 cut(s) 1306, 1415
CciI TCATGA 1 cut(s) 640
CfoI GCGC 1 cut(s) 747
Cfr13I GGNCC 4 cut(s) 383, 1406, 1644, 1808
CseI GACGC 1 cut(s) 1109
DpnI GATC 8 cut(s) 314, 490, 645, 1155, 1836, 2060, 2279, 2385
DpnII GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
DraI TTTAAA 1 cut(s) 1371
DrdI GACNNNNNNGTC 1 cut(s) 16
DseDI GACNNNNNNGTC 1 cut(s) 16
EaeI YGGCCR 2 cut(s) 346, 1926
Ecl136II GAGCTC 1 cut(s) 436
Eco130I CCWWGG 4 cut(s) 780, 1647, 2017, 2038
Eco147I AGGCCT 1 cut(s) 526
Eco24I GRGCYC 2 cut(s) 438, 1911
Eco31I GGTCTC 1 cut(s) 1208
Eco32I GATATC 1 cut(s) 2118
Eco47I GGWCC 2 cut(s) 383, 1644
Eco53kI GAGCTC 1 cut(s) 436
Eco57I CTGAAG 3 cut(s) 279, 1188, 1788
Eco88I CYCGRG 1 cut(s) 2207
EcoICRI GAGCTC 1 cut(s) 436
EcoNI CCTNNNNNAGG 1 cut(s) 2587
EcoO109I RGGNCCY 2 cut(s) 1644, 1808
EcoRI GAATTC 4 cut(s) 365, 1064, 1531, 2322
EcoRII CCWGG 4 cut(s) 72, 709, 791, 2191
EcoRV GATATC 1 cut(s) 2118
EcoT14I CCWWGG 4 cut(s) 780, 1647, 2017, 2038
EcoT22I ATGCAT 2 cut(s) 468, 1757
EcoT38I GRGCYC 2 cut(s) 438, 1911
ErhI CCWWGG 4 cut(s) 780, 1647, 2017, 2038
Esp3I CGTCTC 1 cut(s) 1505
FalI AAGNNNNNCTT 2 cut(s) 1977, 2009
FaqI GGGAC 1 cut(s) 2378
FauI CCCGC 1 cut(s) 674
FblI GTMKAC 2 cut(s) 1990, 2290
Fnu4HI GCNGC 8 cut(s) 106, 298, 301, 603, 753, 1005, 1596, 2013
FokI GGATG 6 cut(s) 89, 1216, 1764, 2065, 2081, 2168
FriOI GRGCYC 2 cut(s) 438, 1911
Fsp4HI GCNGC 8 cut(s) 106, 298, 301, 603, 753, 1005, 1596, 2013
FspAI RTGCGCAY 1 cut(s) 746
FspBI CTAG 6 cut(s) 62, 123, 873, 942, 2136, 2528
FspI TGCGCA 1 cut(s) 746
GlaI GCGC 1 cut(s) 746
GluI GCNGC 8 cut(s) 106, 298, 301, 603, 753, 1005, 1596, 2013
HaeIII GGCC 8 cut(s) 108, 348, 526, 1407, 1810, 1928, 2130, 2476
HapII CCGG 2 cut(s) 492, 2373
HgaI GACGC 1 cut(s) 1109
HhaI GCGC 1 cut(s) 747
Hin6I GCGC 1 cut(s) 745
HinP1I GCGC 1 cut(s) 745
HincII GTYRAC 3 cut(s) 706, 1122, 2291
HindII GTYRAC 3 cut(s) 706, 1122, 2291
HinfI GANTC 7 cut(s) 80, 1073, 1224, 1422, 1652, 1714, 2219
HpaI GTTAAC 1 cut(s) 706
HpaII CCGG 2 cut(s) 492, 2373
HphI GGTGA 5 cut(s) 197, 691, 946, 1687, 1844
HpyAV CCTTC 4 cut(s) 254, 608, 1501, 1979
HpyCH4III ACNGT 5 cut(s) 703, 1196, 1668, 1741, 2271
HpyF10VI GCNNNNNNNGC 4 cut(s) 93, 102, 602, 2009
HspAI GCGC 1 cut(s) 745
KpnI GGTACC 1 cut(s) 2200
KspAI GTTAAC 1 cut(s) 706
Kzo9I GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
LmnI GCTCC 3 cut(s) 63, 249, 782
Lsp1109I GCAGC 5 cut(s) 312, 614, 739, 1607, 1999
LweI GCATC 3 cut(s) 1742, 1773, 2452
MaeI CTAG 6 cut(s) 62, 123, 873, 942, 2136, 2528
MaeIII GTNAC 6 cut(s) 3, 18, 289, 886, 1132, 2333
MalI GATC 8 cut(s) 314, 490, 645, 1155, 1836, 2060, 2279, 2385
MbiI CCGCTC 1 cut(s) 297
MboI GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
MboII GAAGA 7 cut(s) 1100, 1103, 1446, 1635, 1723, 1829, 1832
MfeI CAATTG 1 cut(s) 1358
MflI RGATCY 2 cut(s) 488, 1153
MhlI GDGCHC 4 cut(s) 438, 906, 1165, 1911
MlsI TGGCCA 2 cut(s) 348, 1928
MluNI TGGCCA 2 cut(s) 348, 1928
MlyI GAGTC 4 cut(s) 1416, 1661, 1708, 2213
MmeI TCCRAC 3 cut(s) 1546, 2106, 2253
Mox20I TGGCCA 2 cut(s) 348, 1928
Mph1103I ATGCAT 2 cut(s) 468, 1757
MscI TGGCCA 2 cut(s) 348, 1928
MseI TTAA 9 cut(s) 150, 192, 534, 705, 1023, 1256, 1370, 1457, 1614
MslI CAYNNNNRTG 2 cut(s) 1553, 2067
Msp20I TGGCCA 2 cut(s) 348, 1928
MspI CCGG 2 cut(s) 492, 2373
MspR9I CCNGG 5 cut(s) 74, 493, 711, 793, 2193
MunI CAATTG 1 cut(s) 1358
MvaI CCWGG 4 cut(s) 74, 711, 793, 2193
MvnI CGCG 2 cut(s) 580, 669
MwoI GCNNNNNNNGC 4 cut(s) 93, 102, 602, 2009
NciI CCSGG 1 cut(s) 493
NcoI CCATGG 1 cut(s) 2038
NdeII GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
NlaIV GGNNCC 5 cut(s) 490, 498, 778, 1645, 2198
NmuCI GTSAC 3 cut(s) 3, 18, 886
NsbI TGCGCA 1 cut(s) 746
NsiI ATGCAT 2 cut(s) 468, 1757
NspI RCATGY 3 cut(s) 466, 835, 1483
NspV TTCGAA 2 cut(s) 369, 2357
PagI TCATGA 1 cut(s) 640
PceI AGGCCT 1 cut(s) 526
PcsI WCGNNNNNNNCGW 1 cut(s) 366
PfeI GAWTC 3 cut(s) 80, 1073, 1224
PflMI CCANNNNNTGG 3 cut(s) 38, 1565, 2023
PfoI TCCNGGA 1 cut(s) 791
PkrI GCNGC 8 cut(s) 107, 299, 302, 604, 754, 1006, 1597, 2014
PleI GAGTC 4 cut(s) 1416, 1660, 1708, 2213
PpsI GAGTC 4 cut(s) 1416, 1660, 1708, 2213
PpuMI RGGWCCY 1 cut(s) 1644
PsiI TTATAA 1 cut(s) 1128
Psp124BI GAGCTC 1 cut(s) 438
Psp5II RGGWCCY 1 cut(s) 1644
Psp6I CCWGG 4 cut(s) 72, 709, 791, 2191
PspGI CCWGG 4 cut(s) 72, 709, 791, 2191
PspN4I GGNNCC 5 cut(s) 490, 498, 778, 1645, 2198
PspPI GGNCC 4 cut(s) 383, 1406, 1644, 1808
PspPPI RGGWCCY 1 cut(s) 1644
PstNI CAGNNNCTG 2 cut(s) 1306, 1415
PsuI RGATCY 2 cut(s) 488, 1153
RseI CAYNNNNRTG 2 cut(s) 1553, 2067
SacI GAGCTC 1 cut(s) 438
SalI GTCGAC 1 cut(s) 2289
SaqAI TTAA 9 cut(s) 150, 192, 534, 705, 1023, 1256, 1370, 1457, 1614
SatI GCNGC 8 cut(s) 106, 298, 301, 603, 753, 1005, 1596, 2013
Sau3AI GATC 8 cut(s) 312, 488, 643, 1153, 1834, 2058, 2277, 2383
Sau96I GGNCC 4 cut(s) 383, 1406, 1644, 1808
SchI GAGTC 4 cut(s) 1416, 1661, 1708, 2213
ScrFI CCNGG 5 cut(s) 74, 493, 711, 793, 2193
SduI GDGCHC 4 cut(s) 438, 906, 1165, 1911
SfaNI GCATC 3 cut(s) 1742, 1773, 2452
SfcI CTRYAG 2 cut(s) 1195, 1416
SfuI TTCGAA 2 cut(s) 369, 2357
SinI GGWCC 2 cut(s) 383, 1644
SmiI ATTTAAAT 1 cut(s) 1371
SmiMI CAYNNNNRTG 2 cut(s) 1553, 2067
SseBI AGGCCT 1 cut(s) 526
SsiI CCGC 5 cut(s) 105, 297, 580, 667, 1004
SspI AATATT 3 cut(s) 236, 821, 1540
SspMI CTAG 6 cut(s) 62, 123, 873, 942, 2136, 2528
SstI GAGCTC 1 cut(s) 438
StuI AGGCCT 1 cut(s) 526
StyD4I CCNGG 5 cut(s) 72, 491, 709, 791, 2191
StyI CCWWGG 4 cut(s) 780, 1647, 2017, 2038
SwaI ATTTAAAT 1 cut(s) 1371
TaaI ACNGT 5 cut(s) 703, 1196, 1668, 1741, 2271
TaqI TCGA 4 cut(s) 369, 1247, 2290, 2357
TatI WGTACW 6 cut(s) 936, 979, 1920, 2045, 2266, 2450
TauI GCSGC 3 cut(s) 108, 300, 1007
TfiI GAWTC 3 cut(s) 80, 1073, 1224
Tru1I TTAA 9 cut(s) 150, 192, 534, 705, 1023, 1256, 1370, 1457, 1614
Tru9I TTAA 9 cut(s) 150, 192, 534, 705, 1023, 1256, 1370, 1457, 1614
TscAI CASTG 6 cut(s) 39, 187, 595, 754, 807, 1311
TseFI GTSAC 3 cut(s) 3, 18, 886
TseI GCWGC 5 cut(s) 300, 602, 752, 1595, 2012
Tsp45I GTSAC 3 cut(s) 3, 18, 886
TspDTI ATGAA 9 cut(s) 56, 79, 93, 163, 552, 629, 1101, 1811, 2112
TspGWI ACGGA 3 cut(s) 22, 912, 1266
TspRI CASTG 6 cut(s) 39, 187, 595, 754, 807, 1311
Van91I CCANNNNNTGG 3 cut(s) 38, 1565, 2023
VpaK11BI GGWCC 2 cut(s) 383, 1644
XagI CCTNNNNNAGG 1 cut(s) 2587
XbaI TCTAGA 2 cut(s) 872, 2135
XceI RCATGY 3 cut(s) 466, 835, 1483
XcmI CCANNNNNNNNNTGG 1 cut(s) 1645
XmiI GTMKAC 2 cut(s) 1990, 2290
XspI CTAG 6 cut(s) 62, 123, 873, 942, 2136, 2528
Zsp2I ATGCAT 2 cut(s) 468, 1757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.