RchiOBHm_Chr5g0036411

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000083
Physical Location & Seq
Reverse (-)
30591522 .. 30596579
5058 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31523

Sequence Viewer

Length: 1407 bp
ATGGGTTATACAGAAGGCCCAACAACCATTAGATACATTCTAGACACAAATTACATTGATACTGGTGAGAGCAAGACCATATCAAATGACCATGTTCGTCTACTTCCGCAGCAGTTTCGCACCATTAGGATCTTCCCTAAAGGAACCAGGAACTGTTACAAAATAAACGTTACTAGCGGGCAAAAGTATTTGATACGAGCAAGCTTTGGGTATGGAAATTATGATGGCGAAAACAATTTACCTGAATTCGAACTATGTCTTGGAGATAGTTTGTGGGATTCTGTGGTGTTCACTTGCGATCTTGTGAATTCTATCATAGCAAAGGAGCTCATACATATCCCTGTGCGAAATTACATACATATTTGTTTGGTTGACATAAATAAAGGGGTTCCATTTATATCAGTTATAGAACTCAGGCCTTTACGTGATGAAATTTATCAGTCAGAAGTTGGGTCTTTGGCACTTATTCAGCGATGTGACACTGGTCGAATGGTATTTTCTGATGAAATATATCTATTCAGGTACCCAGACGATGTCCTTGATCGTCTCTGGTATCGTTGTGACGAAGGTGGTTGGAAACAACTAAGTACTTCGTCCGTCATCGACATGGATGCGGTTTACCAACTCCCATCTCGTGTCATGAGTACCGCTGCCACGCCAAACGATATTTCAAGCAAATATCTGAATTTCTCCTTTACGCCTGTCATCGAAGTTGAAGAGTACAGCGCCAGCTGGTCTAGAGAGCTCACTATTACCATGGATGGAAAGCTTATTTCTACGCCATTTGATCCACATTACTTGAGGACAACAACGACTAACACCACGTTTACTGCGGAAGGAGGAAAGTATTATTTTTCAATATCTACTCCGGGGACAACGTATCAACCGATCCTGAACGCCTTTGAGATTTATATGGCAAAAGAATTTTTAGTATCAGAAACAAACCAGCAAGACGCAATTACGAACCTCAAGTCAACTTATAAAATCATTAAGAATTGGCAAGGAGATCCGTGCAACCCTCAAGTTTACCTGTGGGAAGGTGTGAAGTGCAGCTATTCTGATAATGACTCCGCACGAATCATATCCCTGGATTTGTCACAGAGTGGACTAACCGGAGAGATAGCTGCTTCTATAGCTAATCTCACAATGATACAGACTTTGGATTTATCAAACAACAACTTATCCGGACAAATTCCAGAATATTTGTCGCAGTTGCCAAAGTTAAATGTCTTAAACTTGGAGAAAAATGAGCTCACAGGTTCAGTTCCTGCCGGGCTTATAGCAAAAGGAAAGGATGGTTTGTCATTGAGTTTGTGCGGAAATCCAAGTTTATCAAAGCAGGTTCCTTGCGAGAAGAAGAAGAACAAGTTTGCTGTTCCGGTCGTCGTGTCAATTATTGTAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

468

Amino Acids

52.53

Weight (kDa)

5.12

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 3 - 305 4.8e-78 Malectin-like domain
LRR_8 PF13855 362 - 418 8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 981
Acc36I ACCTGC 1 cut(s) 1330
Acc65I GGTACC 1 cut(s) 522
AccB1I GGYRCC 1 cut(s) 522
AccI GTMKAC 1 cut(s) 100
AccIII TCCGGA 1 cut(s) 1184
AciI CCGC 7 cut(s) 107, 177, 614, 648, 833, 1071, 1317
AclI AACGTT 1 cut(s) 168
AclWI GGATC 4 cut(s) 137, 782, 883, 1001
AcsI RAATTY 6 cut(s) 245, 307, 432, 685, 923, 1191
AdeI CACNNNGTG 1 cut(s) 1103
AfaI GTAC 4 cut(s) 524, 589, 646, 722
AgsI TTSAA 3 cut(s) 672, 716, 858
AjnI CCWGG 2 cut(s) 146, 1086
AjuI GAANNNNNNNTTGG 4 cut(s) 243, 275, 652, 684
AluBI AGCT 9 cut(s) 204, 328, 732, 745, 769, 1053, 1124, 1136, 1252
AluI AGCT 9 cut(s) 204, 328, 732, 745, 769, 1053, 1124, 1136, 1252
Alw21I GWGCWC 3 cut(s) 330, 747, 1254
Alw26I GTCTC 1 cut(s) 551
AlwI GGATC 4 cut(s) 137, 782, 883, 1001
AlwNI CAGNNNCTG 2 cut(s) 153, 1268
Aor13HI TCCGGA 1 cut(s) 1184
AoxI GGCC 2 cut(s) 16, 416
ApeKI GCWGC 4 cut(s) 109, 650, 1050, 1124
ApoI RAATTY 6 cut(s) 245, 307, 432, 685, 923, 1191
ArsI GACNNNNNNTTYG 2 cut(s) 956, 988
Asp718I GGTACC 1 cut(s) 522
AspLEI GCGC 1 cut(s) 728
AspS9I GGNCC 1 cut(s) 17
AsuC2I CCSGG 2 cut(s) 870, 1273
AsuHPI GGTGA 1 cut(s) 77
AsuII TTCGAA 1 cut(s) 249
BanI GGYRCC 1 cut(s) 522
BanII GRGCYC 3 cut(s) 330, 747, 1254
BauI CACGAG 1 cut(s) 633
Bbv12I GWGCWC 3 cut(s) 330, 747, 1254
BbvI GCAGC 4 cut(s) 121, 637, 1062, 1111
BccI CCATC 4 cut(s) 218, 637, 755, 1289
BcgI CGANNNNNNTGC 4 cut(s) 98, 132, 593, 627
BciT130I CCWGG 2 cut(s) 148, 1088
BcnI CCSGG 2 cut(s) 870, 1273
BcoDI GTCTC 1 cut(s) 551
BfaI CTAG 3 cut(s) 41, 174, 738
BfmI CTRYAG 1 cut(s) 1131
BfoI RGCGCY 1 cut(s) 729
BfuAI ACCTGC 1 cut(s) 1330
BisI GCNGC 4 cut(s) 110, 651, 1051, 1125
BlsI GCNGC 4 cut(s) 111, 652, 1052, 1126
BmcAI AGTACT 1 cut(s) 589
Bme1390I CCNGG 4 cut(s) 148, 870, 1088, 1273
BmgT120I GGNCC 1 cut(s) 17
BmiI GGNNCC 4 cut(s) 145, 390, 524, 1344
BmrFI CCNGG 4 cut(s) 148, 870, 1088, 1273
BmsI GCATC 1 cut(s) 601
BoxI GACNNNNGTC 1 cut(s) 483
Bpu14I TTCGAA 1 cut(s) 249
BpuEI CTTGAG 3 cut(s) 820, 953, 1005
BpuMI CCSGG 2 cut(s) 870, 1273
BsaAI YACGTR 1 cut(s) 425
BsaJI CCNNGG 3 cut(s) 756, 869, 1086
BsaWI WCCGGW 3 cut(s) 1112, 1184, 1378
Bse1I ACTGG 2 cut(s) 67, 487
BseAI TCCGGA 1 cut(s) 1184
BseBI CCWGG 2 cut(s) 148, 1088
BseDI CCNNGG 3 cut(s) 756, 869, 1086
BseGI GGATG 3 cut(s) 616, 766, 1300
BseMII CTCAG 1 cut(s) 427
BseNI ACTGG 2 cut(s) 67, 487
BseXI GCAGC 4 cut(s) 121, 637, 1062, 1111
BsgI GTGCAG 1 cut(s) 1069
Bsh1285I CGRYCG 1 cut(s) 1383
BshFI GGCC 2 cut(s) 18, 418
BshNI GGYRCC 1 cut(s) 522
BsiEI CGRYCG 1 cut(s) 1383
BsiHKAI GWGCWC 3 cut(s) 330, 747, 1254
BsiSI CCGG 5 cut(s) 869, 1113, 1185, 1272, 1379
BslFI GGGAC 1 cut(s) 886
BsmAI GTCTC 1 cut(s) 551
BsmBI CGTCTC 1 cut(s) 551
BsmFI GGGAC 1 cut(s) 886
BsnI GGCC 2 cut(s) 18, 418
Bsp119I TTCGAA 1 cut(s) 249
Bsp1286I GDGCHC 3 cut(s) 330, 747, 1254
Bsp13I TCCGGA 1 cut(s) 1184
Bsp143I GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
Bsp19I CCATGG 1 cut(s) 756
BspACI CCGC 7 cut(s) 107, 177, 614, 648, 833, 1071, 1317
BspANI GGCC 2 cut(s) 18, 418
BspCNI CTCAG 1 cut(s) 426
BspEI TCCGGA 1 cut(s) 1184
BspHI TCATGA 1 cut(s) 639
BspLI GGNNCC 4 cut(s) 145, 390, 524, 1344
BspMI ACCTGC 1 cut(s) 1330
BspPI GGATC 4 cut(s) 137, 782, 883, 1001
BspT104I TTCGAA 1 cut(s) 249
BspT107I GGYRCC 1 cut(s) 522
BsrI ACTGG 2 cut(s) 67, 487
BssECI CCNNGG 3 cut(s) 756, 869, 1086
BssMI GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
BssSI CACGAG 1 cut(s) 633
BssT1I CCWWGG 1 cut(s) 756
Bst2BI CACGAG 1 cut(s) 633
Bst2UI CCWGG 2 cut(s) 148, 1088
Bst4CI ACNGT 1 cut(s) 155
Bst6I CTCTTC 1 cut(s) 711
BstBAI YACGTR 1 cut(s) 425
BstBI TTCGAA 1 cut(s) 249
BstC8I GCNNGC 3 cut(s) 179, 202, 730
BstDEI CTNAG 2 cut(s) 413, 584
BstDSI CCRYGG 1 cut(s) 756
BstF5I GGATG 3 cut(s) 616, 766, 1300
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 1 cut(s) 728
BstKTI GATC 6 cut(s) 132, 301, 544, 790, 891, 1009
BstMAI GTCTC 1 cut(s) 551
BstMBI GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
BstMCI CGRYCG 1 cut(s) 1383
BstMWI GCNNNNNNNGC 1 cut(s) 1133
BstNI CCWGG 2 cut(s) 148, 1088
BstPAI GACNNNNGTC 1 cut(s) 483
BstSCI CCNGG 4 cut(s) 146, 868, 1086, 1271
BstSFI CTRYAG 1 cut(s) 1131
BstV1I GCAGC 4 cut(s) 121, 637, 1062, 1111
BstX2I RGATCY 2 cut(s) 129, 1006
BstYI RGATCY 2 cut(s) 129, 1006
BsuRI GGCC 2 cut(s) 18, 418
BtgI CCRYGG 1 cut(s) 756
BtgZI GCGATG 1 cut(s) 487
BtsCI GGATG 3 cut(s) 616, 766, 1300
BtsIMutI CAGTG 1 cut(s) 480
BveI ACCTGC 1 cut(s) 1330
Cac8I GCNNGC 3 cut(s) 179, 202, 730
CaiI CAGNNNCTG 2 cut(s) 153, 1268
CciI TCATGA 1 cut(s) 639
CfoI GCGC 1 cut(s) 728
Cfr13I GGNCC 1 cut(s) 17
CseI GACGC 1 cut(s) 962
Csp6I GTAC 4 cut(s) 523, 588, 645, 721
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviAII CATG 4 cut(s) 92, 607, 640, 757
CviQI GTAC 4 cut(s) 523, 588, 645, 721
DdeI CTNAG 2 cut(s) 413, 584
DpnI GATC 6 cut(s) 131, 300, 543, 789, 890, 1008
DpnII GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
DraIII CACNNNGTG 1 cut(s) 1103
Eam1104I CTCTTC 1 cut(s) 711
EarI CTCTTC 1 cut(s) 711
Ecl136II GAGCTC 3 cut(s) 328, 745, 1252
Eco130I CCWWGG 1 cut(s) 756
Eco147I AGGCCT 1 cut(s) 418
Eco24I GRGCYC 3 cut(s) 330, 747, 1254
Eco53kI GAGCTC 3 cut(s) 328, 745, 1252
EcoICRI GAGCTC 3 cut(s) 328, 745, 1252
EcoRI GAATTC 2 cut(s) 245, 307
EcoRII CCWGG 2 cut(s) 146, 1086
EcoT14I CCWWGG 1 cut(s) 756
EcoT38I GRGCYC 3 cut(s) 330, 747, 1254
ErhI CCWWGG 1 cut(s) 756
Esp3I CGTCTC 1 cut(s) 551
FaeI CATG 4 cut(s) 95, 610, 643, 760
FaqI GGGAC 1 cut(s) 886
FatI CATG 4 cut(s) 91, 606, 639, 756
FauI CCCGC 1 cut(s) 170
FblI GTMKAC 1 cut(s) 100
Fnu4HI GCNGC 4 cut(s) 110, 651, 1051, 1125
FokI GGATG 3 cut(s) 623, 773, 1307
FriOI GRGCYC 3 cut(s) 330, 747, 1254
Fsp4HI GCNGC 4 cut(s) 110, 651, 1051, 1125
FspBI CTAG 3 cut(s) 41, 174, 738
GlaI GCGC 1 cut(s) 727
GluI GCNGC 4 cut(s) 110, 651, 1051, 1125
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 2 cut(s) 18, 418
HapII CCGG 5 cut(s) 869, 1113, 1185, 1272, 1379
HgaI GACGC 1 cut(s) 962
HhaI GCGC 1 cut(s) 728
Hin1II CATG 4 cut(s) 95, 610, 643, 760
Hin6I GCGC 1 cut(s) 726
HinP1I GCGC 1 cut(s) 726
HincII GTYRAC 2 cut(s) 373, 975
HindII GTYRAC 2 cut(s) 373, 975
HindIII AAGCTT 2 cut(s) 202, 767
HinfI GANTC 3 cut(s) 278, 1067, 1077
HpaII CCGG 5 cut(s) 869, 1113, 1185, 1272, 1379
HphI GGTGA 1 cut(s) 77
Hpy166II GTNNAC 8 cut(s) 101, 291, 373, 619, 828, 975, 1027, 1106
Hpy188I TCNGA 5 cut(s) 445, 502, 684, 937, 1060
Hpy188III TCNNGA 6 cut(s) 41, 640, 738, 892, 1185, 1196
Hpy8I GTNNAC 8 cut(s) 101, 291, 373, 619, 828, 975, 1027, 1106
Hpy99I CGWCG 1 cut(s) 1388
HpyAV CCTTC 4 cut(s) 8, 560, 830, 1031
HpyCH4III ACNGT 1 cut(s) 155
HpyCH4IV ACGT 4 cut(s) 168, 424, 824, 878
HpyCH4V TGCA 2 cut(s) 1014, 1050
HpyF10VI GCNNNNNNNGC 1 cut(s) 1133
HpyF3I CTNAG 2 cut(s) 413, 584
HpySE526I ACGT 4 cut(s) 168, 424, 824, 878
Hsp92II CATG 4 cut(s) 95, 610, 643, 760
HspAI GCGC 1 cut(s) 726
Kpn2I TCCGGA 1 cut(s) 1184
KpnI GGTACC 1 cut(s) 526
Kzo9I GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
LmnI GCTCC 1 cut(s) 325
Lsp1109I GCAGC 4 cut(s) 121, 637, 1062, 1111
LweI GCATC 1 cut(s) 601
MaeI CTAG 3 cut(s) 41, 174, 738
MaeII ACGT 4 cut(s) 168, 424, 824, 878
MaeIII GTNAC 5 cut(s) 155, 169, 476, 560, 1095
MalI GATC 6 cut(s) 131, 300, 543, 789, 890, 1008
MboI GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
MboII GAAGA 5 cut(s) 124, 728, 1366, 1369, 1372
MflI RGATCY 2 cut(s) 129, 1006
MhlI GDGCHC 3 cut(s) 330, 747, 1254
MlyI GAGTC 1 cut(s) 1061
MmeI TCCRAC 1 cut(s) 554
MnlI CCTC 4 cut(s) 795, 833, 977, 1029
MroI TCCGGA 1 cut(s) 1184
MseI TTAA 3 cut(s) 990, 1223, 1232
MslI CAYNNNNRTG 1 cut(s) 605
MspA1I CMGCKG 2 cut(s) 650, 732
MspI CCGG 5 cut(s) 869, 1113, 1185, 1272, 1379
MspR9I CCNGG 4 cut(s) 148, 870, 1088, 1273
MvaI CCWGG 2 cut(s) 148, 1088
MwoI GCNNNNNNNGC 1 cut(s) 1133
NciI CCSGG 2 cut(s) 870, 1273
NcoI CCATGG 1 cut(s) 756
NdeII GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
NlaIII CATG 4 cut(s) 95, 610, 643, 760
NlaIV GGNNCC 4 cut(s) 145, 390, 524, 1344
NmuCI GTSAC 3 cut(s) 476, 560, 1095
NspV TTCGAA 1 cut(s) 249
PagI TCATGA 1 cut(s) 639
PceI AGGCCT 1 cut(s) 418
PcsI WCGNNNNNNNCGW 1 cut(s) 884
PfeI GAWTC 2 cut(s) 278, 1077
PflFI GACNNNGTC 1 cut(s) 533
PkrI GCNGC 4 cut(s) 111, 652, 1052, 1126
PleI GAGTC 1 cut(s) 1061
PpsI GAGTC 1 cut(s) 1061
Ppu21I YACGTR 1 cut(s) 425
PshAI GACNNNNGTC 1 cut(s) 483
PsiI TTATAA 1 cut(s) 981
Psp124BI GAGCTC 3 cut(s) 330, 747, 1254
Psp1406I AACGTT 1 cut(s) 168
Psp6I CCWGG 2 cut(s) 146, 1086
PspGI CCWGG 2 cut(s) 146, 1086
PspN4I GGNNCC 4 cut(s) 145, 390, 524, 1344
PspPI GGNCC 1 cut(s) 17
PstNI CAGNNNCTG 2 cut(s) 153, 1268
PsuI RGATCY 2 cut(s) 129, 1006
PsyI GACNNNGTC 1 cut(s) 533
PvuII CAGCTG 1 cut(s) 732
RsaI GTAC 4 cut(s) 524, 589, 646, 722
RsaNI GTAC 4 cut(s) 523, 588, 645, 721
RseI CAYNNNNRTG 1 cut(s) 605
SacI GAGCTC 3 cut(s) 330, 747, 1254
SaqAI TTAA 3 cut(s) 990, 1223, 1232
SatI GCNGC 4 cut(s) 110, 651, 1051, 1125
Sau3AI GATC 6 cut(s) 129, 298, 541, 787, 888, 1006
Sau96I GGNCC 1 cut(s) 17
ScaI AGTACT 1 cut(s) 589
SchI GAGTC 1 cut(s) 1061
ScrFI CCNGG 4 cut(s) 148, 870, 1088, 1273
SduI GDGCHC 3 cut(s) 330, 747, 1254
SfaNI GCATC 1 cut(s) 601
SfcI CTRYAG 1 cut(s) 1131
SfuI TTCGAA 1 cut(s) 249
SmiMI CAYNNNNRTG 1 cut(s) 605
SmlI CTYRAG 3 cut(s) 799, 968, 1020
SmoI CTYRAG 3 cut(s) 799, 968, 1020
SseBI AGGCCT 1 cut(s) 418
SsiI CCGC 7 cut(s) 107, 177, 614, 648, 833, 1071, 1317
SspI AATATT 1 cut(s) 1202
SspMI CTAG 3 cut(s) 41, 174, 738
SstI GAGCTC 3 cut(s) 330, 747, 1254
StuI AGGCCT 1 cut(s) 418
StyD4I CCNGG 4 cut(s) 146, 868, 1086, 1271
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 1 cut(s) 155
TaiI ACGT 4 cut(s) 171, 427, 827, 881
TaqI TCGA 4 cut(s) 249, 487, 603, 708
TatI WGTACW 2 cut(s) 587, 720
TfiI GAWTC 2 cut(s) 278, 1077
Tru1I TTAA 3 cut(s) 990, 1223, 1232
Tru9I TTAA 3 cut(s) 990, 1223, 1232
TscAI CASTG 1 cut(s) 487
TseFI GTSAC 3 cut(s) 476, 560, 1095
TseI GCWGC 4 cut(s) 109, 650, 1050, 1124
Tsp45I GTSAC 3 cut(s) 476, 560, 1095
TspDTI ATGAA 2 cut(s) 444, 519
TspGWI ACGGA 2 cut(s) 586, 999
TspRI CASTG 1 cut(s) 487
Tth111I GACNNNGTC 1 cut(s) 533
XapI RAATTY 6 cut(s) 245, 307, 432, 685, 923, 1191
XbaI TCTAGA 2 cut(s) 40, 737
XmiI GTMKAC 1 cut(s) 100
XspI CTAG 3 cut(s) 41, 174, 738
ZrmI AGTACT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.