Rh2AG419800

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
62392826 .. 62398453
5628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG419800.1

Sequence Viewer

Length: 843 bp
ATGATCGAATCAGGCTTCATTAGCTTAGACTGTGGGCTACCAGCAAATTCAAGCTACTCTGACCCGATAAACCAGATTTACTACATGTTAGATGAACCCTTCATTGATACTGGTGTAAGTAGACGCATAGCGCCTGAATATGAAGCTGTCCATCATAAGCAAATAGCTCATGTCCGAAGCTTTCCTCAAGGGATCAGGAACTGTTACAGAGTGAACATTACAAGTGGTACTAAGTATTTGATTAGAGCAACTTTTGTGTATGGGAATTATGATGGCGGCCTTAATCAATTGCCAAAGTTTGATCTGCACCTGGGACCTAATTTCTGGGATTCAGGGACAGTTGATGGCGTATCCTTGAGTACCATGAAAGAAGTCATACATATTCCTTCGTTAAACTACATTTATATCTGCCTCGTGAACACAGGGTCCGGAACACGATTCATTTCATCATTGGAACCAAGGACTTTGAAAAACACAATTTACACAACCAAAGATTACGAGTTGTATGATGAAGAAAATGATGTTGCCATAGAGGATGATCATTTATTTGATAATACTGTTGTGTTGACTCCATTAGGCAGACCAAATGTTGAAGATGAAGATAGTTTGCCACTGAACCTTTCACAAGAGAATGTGTTAGAGGAGGACTATACTATGGAGTCTGGTTCCCTATTACCATTAAACTTCATGCAAGATGACATTGTGTCAGAGAAAGAATATAATTCAGATGATTTGAACAATCTGGTGAATTCAGAGGATGACGAAGAAGGAATGGCTAAATATCCTGAGTTTAACGCTGCCACAAATATGGAGAACCATGTTTTCGTGATAGGAATGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

280

Amino Acids

31.67

Weight (kDa)

4.29

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 9 - 165 7.8e-58 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 121
AccIII TCCGGA 1 cut(s) 428
AciI CCGC 1 cut(s) 276
AclWI GGATC 1 cut(s) 200
AcsI RAATTY 2 cut(s) 46, 748
AfaI GTAC 2 cut(s) 229, 361
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 4 cut(s) 51, 469, 593, 736
AhdI GACNNNNNGTC 1 cut(s) 703
AjnI CCWGG 1 cut(s) 309
AloI GAACNNNNNNTCC 2 cut(s) 410, 442
AluBI AGCT 5 cut(s) 24, 54, 146, 167, 180
AluI AGCT 5 cut(s) 24, 54, 146, 167, 180
AlwI GGATC 1 cut(s) 200
AlwNI CAGNNNCTG 1 cut(s) 201
Aor13HI TCCGGA 1 cut(s) 428
AoxI GGCC 1 cut(s) 277
ApeKI GCWGC 1 cut(s) 797
ApoI RAATTY 2 cut(s) 46, 748
AspLEI GCGC 1 cut(s) 133
AspS9I GGNCC 2 cut(s) 314, 426
AsuHPI GGTGA 1 cut(s) 757
AvaII GGWCC 2 cut(s) 314, 426
BaeI ACNNNNGTAYC 2 cut(s) 99, 132
BauI CACGAG 1 cut(s) 413
BbvI GCAGC 1 cut(s) 784
BccI CCATC 3 cut(s) 159, 266, 338
BciT130I CCWGG 1 cut(s) 311
BciVI GTATCC 1 cut(s) 361
BclI TGATCA 1 cut(s) 538
BfoI RGCGCY 1 cut(s) 134
BfuI GTATCC 1 cut(s) 361
BisI GCNGC 2 cut(s) 277, 798
BlsI GCNGC 2 cut(s) 278, 799
Bme1390I CCNGG 1 cut(s) 311
Bme18I GGWCC 2 cut(s) 314, 426
BmeRI GACNNNNNGTC 1 cut(s) 703
BmgT120I GGNCC 2 cut(s) 314, 426
BmiI GGNNCC 4 cut(s) 315, 427, 456, 667
BmrFI CCNGG 1 cut(s) 311
BpuEI CTTGAG 2 cut(s) 171, 376
BsaJI CCNNGG 2 cut(s) 310, 458
BsaWI WCCGGW 1 cut(s) 428
Bse1I ACTGG 1 cut(s) 115
BseAI TCCGGA 1 cut(s) 428
BseBI CCWGG 1 cut(s) 311
BseDI CCNNGG 2 cut(s) 310, 458
BseGI GGATG 2 cut(s) 541, 763
BseMII CTCAG 1 cut(s) 777
BseNI ACTGG 1 cut(s) 115
BseRI GAGGAG 1 cut(s) 656
BseXI GCAGC 1 cut(s) 784
BsgI GTGCAG 1 cut(s) 290
BshFI GGCC 1 cut(s) 279
BsiSI CCGG 1 cut(s) 429
BslFI GGGAC 2 cut(s) 327, 349
BsmFI GGGAC 2 cut(s) 327, 349
BsnI GGCC 1 cut(s) 279
Bsp13I TCCGGA 1 cut(s) 428
Bsp143I GATC 4 cut(s) 3, 192, 301, 538
BspACI CCGC 1 cut(s) 276
BspANI GGCC 1 cut(s) 279
BspCNI CTCAG 1 cut(s) 778
BspEI TCCGGA 1 cut(s) 428
BspLI GGNNCC 4 cut(s) 315, 427, 456, 667
BspPI GGATC 1 cut(s) 200
BsrI ACTGG 1 cut(s) 115
BssECI CCNNGG 2 cut(s) 310, 458
BssMI GATC 4 cut(s) 3, 192, 301, 538
BssSI CACGAG 1 cut(s) 413
BssT1I CCWWGG 1 cut(s) 458
Bst2BI CACGAG 1 cut(s) 413
Bst2UI CCWGG 1 cut(s) 311
Bst4CI ACNGT 4 cut(s) 32, 203, 340, 559
BstDEI CTNAG 3 cut(s) 25, 231, 786
BstF5I GGATG 2 cut(s) 541, 763
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 1 cut(s) 133
BstKTI GATC 4 cut(s) 6, 195, 304, 541
BstMBI GATC 4 cut(s) 3, 192, 301, 538
BstMWI GCNNNNNNNGC 1 cut(s) 21
BstNI CCWGG 1 cut(s) 311
BstNSI RCATGY 1 cut(s) 88
BstSCI CCNGG 1 cut(s) 309
BstV1I GCAGC 1 cut(s) 784
BstXI CCANNNNNNTGG 1 cut(s) 808
BsuI GTATCC 1 cut(s) 361
BsuRI GGCC 1 cut(s) 279
BtsCI GGATG 2 cut(s) 541, 763
BtsIMutI CAGTG 1 cut(s) 611
CaiI CAGNNNCTG 1 cut(s) 201
CfoI GCGC 1 cut(s) 133
Cfr13I GGNCC 2 cut(s) 314, 426
CseI GACGC 1 cut(s) 132
Csp6I GTAC 2 cut(s) 228, 360
CviAII CATG 5 cut(s) 85, 170, 364, 688, 818
CviJI RGCY 9 cut(s) 15, 24, 37, 54, 146, 167, 180, 279, 776
CviKI_1 RGCY 9 cut(s) 15, 24, 37, 54, 146, 167, 180, 279, 776
CviQI GTAC 2 cut(s) 228, 360
DdeI CTNAG 3 cut(s) 25, 231, 786
DpnI GATC 4 cut(s) 5, 194, 303, 540
DpnII GATC 4 cut(s) 3, 192, 301, 538
DriI GACNNNNNGTC 1 cut(s) 703
Eam1105I GACNNNNNGTC 1 cut(s) 703
Eco130I CCWWGG 1 cut(s) 458
Eco47I GGWCC 2 cut(s) 314, 426
EcoO109I RGGNCCY 1 cut(s) 314
EcoRI GAATTC 1 cut(s) 748
EcoRII CCWGG 1 cut(s) 309
EcoT14I CCWWGG 1 cut(s) 458
ErhI CCWWGG 1 cut(s) 458
FaeI CATG 5 cut(s) 88, 173, 367, 691, 821
FaqI GGGAC 2 cut(s) 327, 349
FatI CATG 5 cut(s) 84, 169, 363, 687, 817
FbaI TGATCA 1 cut(s) 538
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 2 cut(s) 277, 798
FokI GGATG 2 cut(s) 548, 770
Fsp4HI GCNGC 2 cut(s) 277, 798
GlaI GCGC 1 cut(s) 132
GluI GCNGC 2 cut(s) 277, 798
HaeII RGCGCY 1 cut(s) 134
HaeIII GGCC 1 cut(s) 279
HapII CCGG 1 cut(s) 429
HgaI GACGC 1 cut(s) 132
HhaI GCGC 1 cut(s) 133
Hin1II CATG 5 cut(s) 88, 173, 367, 691, 821
Hin6I GCGC 1 cut(s) 131
HinP1I GCGC 1 cut(s) 131
HincII GTYRAC 1 cut(s) 567
HindII GTYRAC 1 cut(s) 567
HindIII AAGCTT 1 cut(s) 178
HinfI GANTC 5 cut(s) 8, 329, 438, 568, 659
HpaII CCGG 1 cut(s) 429
HphI GGTGA 1 cut(s) 757
Hpy166II GTNNAC 4 cut(s) 122, 214, 418, 567
Hpy188I TCNGA 5 cut(s) 61, 176, 709, 727, 754
Hpy188III TCNNGA 5 cut(s) 196, 415, 429, 785, 826
Hpy8I GTNNAC 4 cut(s) 122, 214, 418, 567
HpyAV CCTTC 3 cut(s) 109, 396, 761
HpyCH4III ACNGT 4 cut(s) 32, 203, 340, 559
HpyCH4V TGCA 2 cut(s) 307, 691
HpyF10VI GCNNNNNNNGC 1 cut(s) 21
HpyF3I CTNAG 3 cut(s) 25, 231, 786
Hsp92II CATG 5 cut(s) 88, 173, 367, 691, 821
HspAI GCGC 1 cut(s) 131
Kpn2I TCCGGA 1 cut(s) 428
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 4 cut(s) 3, 192, 301, 538
Lsp1109I GCAGC 1 cut(s) 784
MaeIII GTNAC 1 cut(s) 203
MalI GATC 4 cut(s) 5, 194, 303, 540
MboI GATC 4 cut(s) 3, 192, 301, 538
MboII GAAGA 4 cut(s) 524, 605, 611, 776
MfeI CAATTG 1 cut(s) 287
MluCI AATT 7 cut(s) 46, 265, 287, 319, 477, 721, 748
MlyI GAGTC 2 cut(s) 562, 668
MnlI CCTC 6 cut(s) 195, 422, 526, 634, 637, 748
MroI TCCGGA 1 cut(s) 428
MseI TTAA 4 cut(s) 282, 392, 680, 792
MslI CAYNNNNRTG 1 cut(s) 806
MspI CCGG 1 cut(s) 429
MspR9I CCNGG 1 cut(s) 311
MunI CAATTG 1 cut(s) 287
MvaI CCWGG 1 cut(s) 311
MwoI GCNNNNNNNGC 1 cut(s) 21
NdeII GATC 4 cut(s) 3, 192, 301, 538
NlaIII CATG 5 cut(s) 88, 173, 367, 691, 821
NlaIV GGNNCC 4 cut(s) 315, 427, 456, 667
NspI RCATGY 1 cut(s) 88
PciI ACATGT 1 cut(s) 84
PfeI GAWTC 3 cut(s) 8, 329, 438
PkrI GCNGC 2 cut(s) 278, 799
PleI GAGTC 2 cut(s) 562, 667
PpsI GAGTC 2 cut(s) 562, 667
PpuMI RGGWCCY 1 cut(s) 314
PscI ACATGT 1 cut(s) 84
Psp5II RGGWCCY 1 cut(s) 314
Psp6I CCWGG 1 cut(s) 309
PspGI CCWGG 1 cut(s) 309
PspN4I GGNNCC 4 cut(s) 315, 427, 456, 667
PspPI GGNCC 2 cut(s) 314, 426
PspPPI RGGWCCY 1 cut(s) 314
PstNI CAGNNNCTG 1 cut(s) 201
RsaI GTAC 2 cut(s) 229, 361
RsaNI GTAC 2 cut(s) 228, 360
RseI CAYNNNNRTG 1 cut(s) 806
SaqAI TTAA 4 cut(s) 282, 392, 680, 792
SatI GCNGC 2 cut(s) 277, 798
Sau3AI GATC 4 cut(s) 3, 192, 301, 538
Sau96I GGNCC 2 cut(s) 314, 426
SchI GAGTC 2 cut(s) 562, 668
ScrFI CCNGG 1 cut(s) 311
SetI ASST 8 cut(s) 26, 56, 148, 169, 182, 312, 319, 621
SinI GGWCC 2 cut(s) 314, 426
SmiMI CAYNNNNRTG 1 cut(s) 806
SmlI CTYRAG 2 cut(s) 186, 355
SmoI CTYRAG 2 cut(s) 186, 355
Sse9I AATT 7 cut(s) 46, 265, 287, 319, 477, 721, 748
SsiI CCGC 1 cut(s) 276
StyD4I CCNGG 1 cut(s) 309
StyI CCWWGG 1 cut(s) 458
TaaI ACNGT 4 cut(s) 32, 203, 340, 559
TaqI TCGA 1 cut(s) 6
TasI AATT 7 cut(s) 46, 265, 287, 319, 477, 721, 748
TauI GCSGC 1 cut(s) 279
TfiI GAWTC 3 cut(s) 8, 329, 438
Tru1I TTAA 4 cut(s) 282, 392, 680, 792
Tru9I TTAA 4 cut(s) 282, 392, 680, 792
TscAI CASTG 1 cut(s) 618
TseI GCWGC 1 cut(s) 797
TspRI CASTG 1 cut(s) 618
VpaK11BI GGWCC 2 cut(s) 314, 426
XapI RAATTY 2 cut(s) 46, 748
XceI RCATGY 1 cut(s) 88
XmiI GTMKAC 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.