FvH4_6g32691

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000083
Physical Location & Seq
Reverse (-)
25766588 .. 25772962
6375 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g32691.t1

Sequence Viewer

Length: 1635 bp
ATGAAGTATTTGATTCGAGCAAGTTTCTTTTATGGAAATTATGATGGTGATAATAAGCTACCAGAATTCGAACTACATATTGGAGCTAACTTGTGGGATACTGTGAGGTTTAAGGATGCATCAACTGACAAGAAGAAGGAGCTCATACATACCCCCTTGCGGAAGTACATTCATGTTTGTTTGGTGGACATAGGCTCTGGGATTCCTTTTATATCAGCTATAGAGCTAAGGCCTTTACCTAACGAGACTTATCAAACACAAATGGGTTCCTTGGAACTTGTTTCACGATATGACACTGGTCAAATGGATACTCGTAGAGGATACAGGTTTCCATTTGATACTTTTGATCGTGTCTGGTCGCGTGCATATAATGACGTTGAGGCACAATTAAGTACACCATTCCCCGTTAACTCTTCTTATCACAATAAATACAATCCACCGTCCGTTGTCATGAGTACTGCCACCACGCCGAGAGATGAAAATGATCCTTTGAATATTTCTTGGTTGCCTTCTAATGATAGCAATGCAGAATATCATATATACATGCACTTTGCAGAAGTTCAAAAGCTTGAACCCAACCAGTCTAGACAGTTCAACATCACTAGGAATGGAGAGCACTTTTATGGACCAGTTACTCCTCCTTACTTGTACACAACTACTATTTCTAGCCCTAAAGCTTTTGGCGGACTACAAAACAATTTTTCAATCTTGAAGGCTGAGAGCTCTAGTCTTCCACCCATACTCAATGCTTTTGAGATTTATAAGGTGAAAGAATTCCTAGAACGGGATACAGACCAAGAAGATGTTGTTGCAATCACAAACATCAAGGAAACTTATAAAATTAGAAAAAACTGGCAAGGAGATCCATGTTCCCCTCAAGCTTACTCATGGGAAGGTCTAAACTGTAGCTATCATGCTTACGAGTCCCTAAGACGAATTACAACCTTGAACTTGTCCTCGAATGGATTAACAGGGGAGATCGCTCTCTCTATATCGAATCTGGCAAAGATACAAACTCTGGATTTATCAAACAACAACTTAACAGGAAGTATTCCAGAGTTTTTGTCTCAATTACCAGATCTAATTTTCATAAACTTGGTGAATAACAAGCTTACAGGCTCCGTTCCAGTAGGATTAATTGAGAAAAGGAACGATGGTTTGCCGTCACTAAGTTTGTGCCAAAATCTAAAACTATCTGGACACGTTCCTTGCAAGTTAAAGAAGAAGCACAATTTCGTTATTCTTAAAGTGGTATCCGGAATTTTAATCCTGTTGTCAATTTTGGTAGCTATCATCTGCTGGGGCCTCAAAAGCAAAAGACAACTGGGAGATGACACAGATGTGAAAGCCACTGTTCAATTGGGGTCAATGGAATCGACAAAACGAAAATTTACCTACTCTGAGATACTCAAGATTACCAACAATTTTGAAAGGATTCTTGGAAAAGGTGGATTCGGAACTGTTTATCATGGTGGCATAGACAAGACTCAAGTGGCCATCAAGATGCTTTCGCCGTCAGCAGTTCAAGGGTTTCAACAATTTCATGCCGAGGTTGATCTTCTTATGAGGGTTCATCACAAAAACTTGACAAGTCTAGCTGGATACTGTAATGATAAAACTAGAGAACTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

545

Amino Acids

61.47

Weight (kDa)

8.26

Isoelectric Point (pI)

42.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 2 - 256 1e-83 Malectin-like domain
LRR_8 PF13855 311 - 371 2.7e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 476 - 539 3.4e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 762, 837
AccII CGCG 1 cut(s) 361
AccIII TCCGGA 1 cut(s) 1256
AciI CCGC 2 cut(s) 160, 684
AclWI GGATC 2 cut(s) 479, 857
AcoI YGGCCR 1 cut(s) 1494
AcsI RAATTY 4 cut(s) 65, 773, 1260, 1388
AfaI GTAC 4 cut(s) 167, 394, 457, 650
AfiI CCNNNNNNNGG 2 cut(s) 159, 784
AflIII ACRYGT 1 cut(s) 1201
AjuI GAANNNNNNNTTGG 4 cut(s) 63, 95, 1422, 1454
AleI CACNNNNGTG 1 cut(s) 1340
Alw21I GWGCWC 3 cut(s) 144, 618, 725
Alw26I GTCTC 2 cut(s) 239, 1071
AlwI GGATC 2 cut(s) 479, 857
Aor13HI TCCGGA 1 cut(s) 1256
AoxI GGCC 3 cut(s) 230, 1303, 1494
ApoI RAATTY 4 cut(s) 65, 773, 1260, 1388
AseI ATTAAT 1 cut(s) 1136
Asp700I GAANNNNTTC 2 cut(s) 773, 1434
AspS9I GGNCC 2 cut(s) 626, 1303
AsuHPI GGTGA 3 cut(s) 59, 778, 1111
AsuII TTCGAA 1 cut(s) 69
AvaII GGWCC 1 cut(s) 626
BalI TGGCCA 1 cut(s) 1496
BanII GRGCYC 2 cut(s) 144, 725
BbsI GAAGAC 1 cut(s) 722
Bbv12I GWGCWC 3 cut(s) 144, 618, 725
BccI CCATC 3 cut(s) 38, 1148, 1505
BceAI ACGGC 2 cut(s) 1147, 1498
BciVI GTATCC 6 cut(s) 91, 301, 314, 781, 1264, 1595
BcoDI GTCTC 2 cut(s) 239, 1071
BfaI CTAG 8 cut(s) 585, 603, 666, 726, 779, 1595, 1620, 1628
BfmI CTRYAG 2 cut(s) 219, 904
BfuI GTATCC 6 cut(s) 91, 301, 314, 781, 1264, 1595
BglII AGATCT 1 cut(s) 1078
BmcAI AGTACT 1 cut(s) 457
Bme18I GGWCC 1 cut(s) 626
BmgT120I GGNCC 2 cut(s) 626, 1303
BmiI GGNNCC 3 cut(s) 268, 1120, 1304
BmrI ACTGGG 1 cut(s) 1334
BmsI GCATC 3 cut(s) 106, 128, 1494
BmuI ACTGGG 1 cut(s) 1334
BoxI GACNNNNGTC 1 cut(s) 297
BpiI GAAGAC 1 cut(s) 722
Bpu10I CCTNAGC 1 cut(s) 227
Bpu14I TTCGAA 1 cut(s) 69
BpuEI CTTGAG 3 cut(s) 861, 1394, 1473
BsaJI CCNNGG 2 cut(s) 270, 1548
BsaWI WCCGGW 1 cut(s) 1256
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 784
Bse1I ACTGG 6 cut(s) 301, 580, 629, 857, 1127, 1329
Bse3DI GCAATG 1 cut(s) 529
BseAI TCCGGA 1 cut(s) 1256
BseDI CCNNGG 2 cut(s) 270, 1548
BseGI GGATG 1 cut(s) 121
BseLI CCNNNNNNNGG 2 cut(s) 159, 784
BseMI GCAATG 1 cut(s) 529
BseMII CTCAG 2 cut(s) 708, 1392
BseNI ACTGG 6 cut(s) 301, 580, 629, 857, 1127, 1329
BseRI GAGGAG 1 cut(s) 627
BseYI CCCAGC 1 cut(s) 1299
Bsh1236I CGCG 1 cut(s) 361
BshFI GGCC 3 cut(s) 232, 1305, 1496
BsiHKAI GWGCWC 3 cut(s) 144, 618, 725
BsiSI CCGG 1 cut(s) 1257
BslFI GGGAC 1 cut(s) 910
BslI CCNNNNNNNGG 2 cut(s) 159, 784
BsmAI GTCTC 2 cut(s) 239, 1071
BsmFI GGGAC 1 cut(s) 910
BsnI GGCC 3 cut(s) 232, 1305, 1496
Bsp119I TTCGAA 1 cut(s) 69
Bsp1286I GDGCHC 3 cut(s) 144, 618, 725
Bsp13I TCCGGA 1 cut(s) 1256
Bsp1407I TGTACA 1 cut(s) 648
Bsp143I GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
BspACI CCGC 2 cut(s) 160, 684
BspANI GGCC 3 cut(s) 232, 1305, 1496
BspCNI CTCAG 2 cut(s) 709, 1393
BspEI TCCGGA 1 cut(s) 1256
BspFNI CGCG 1 cut(s) 361
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 3 cut(s) 268, 1120, 1304
BspPI GGATC 2 cut(s) 479, 857
BspT104I TTCGAA 1 cut(s) 69
BsrDI GCAATG 1 cut(s) 529
BsrGI TGTACA 1 cut(s) 648
BsrI ACTGG 6 cut(s) 301, 580, 629, 857, 1127, 1329
BssECI CCNNGG 2 cut(s) 270, 1548
BssMI GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
BssT1I CCWWGG 1 cut(s) 270
Bst4CI ACNGT 7 cut(s) 103, 441, 591, 905, 1354, 1462, 1607
Bst6I CTCTTC 1 cut(s) 418
BstAUI TGTACA 1 cut(s) 648
BstBI TTCGAA 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 363
BstDEI CTNAG 5 cut(s) 227, 717, 929, 1169, 1401
BstF5I GGATG 1 cut(s) 121
BstFNI CGCG 1 cut(s) 361
BstKTI GATC 6 cut(s) 349, 487, 865, 981, 1081, 1558
BstMAI GTCTC 2 cut(s) 239, 1071
BstMBI GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
BstMWI GCNNNNNNNGC 1 cut(s) 1311
BstNSI RCATGY 1 cut(s) 547
BstPAI GACNNNNGTC 1 cut(s) 297
BstSFI CTRYAG 2 cut(s) 219, 904
BstUI CGCG 1 cut(s) 361
BstV2I GAAGAC 1 cut(s) 722
BstX2I RGATCY 2 cut(s) 862, 1078
BstYI RGATCY 2 cut(s) 862, 1078
BsuI GTATCC 6 cut(s) 91, 301, 314, 781, 1264, 1595
BsuRI GGCC 3 cut(s) 232, 1305, 1496
BtsCI GGATG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 294, 1350
Cac8I GCNNGC 1 cut(s) 363
CciI TCATGA 1 cut(s) 450
Cfr13I GGNCC 2 cut(s) 626, 1303
Csp6I GTAC 4 cut(s) 166, 393, 456, 649
CviAII CATG 8 cut(s) 173, 451, 544, 867, 888, 914, 1469, 1544
CviQI GTAC 4 cut(s) 166, 393, 456, 649
DdeI CTNAG 5 cut(s) 227, 717, 929, 1169, 1401
DpnI GATC 6 cut(s) 348, 486, 864, 980, 1080, 1557
DpnII GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
EaeI YGGCCR 1 cut(s) 1494
Eam1104I CTCTTC 1 cut(s) 418
EarI CTCTTC 1 cut(s) 418
EciI GGCGGA 1 cut(s) 699
Ecl136II GAGCTC 2 cut(s) 142, 723
Eco130I CCWWGG 1 cut(s) 270
Eco147I AGGCCT 1 cut(s) 232
Eco24I GRGCYC 2 cut(s) 144, 725
Eco47I GGWCC 1 cut(s) 626
Eco53kI GAGCTC 2 cut(s) 142, 723
EcoICRI GAGCTC 2 cut(s) 142, 723
EcoO109I RGGNCCY 1 cut(s) 1303
EcoRI GAATTC 2 cut(s) 65, 773
EcoT14I CCWWGG 1 cut(s) 270
EcoT22I ATGCAT 1 cut(s) 121
EcoT38I GRGCYC 2 cut(s) 144, 725
ErhI CCWWGG 1 cut(s) 270
FaeI CATG 8 cut(s) 176, 454, 547, 870, 891, 917, 1472, 1547
FaqI GGGAC 1 cut(s) 910
FatI CATG 8 cut(s) 172, 450, 543, 866, 887, 913, 1468, 1543
FokI GGATG 1 cut(s) 128
FriOI GRGCYC 2 cut(s) 144, 725
FspBI CTAG 8 cut(s) 585, 603, 666, 726, 779, 1595, 1620, 1628
GsaI CCCAGC 1 cut(s) 1303
HaeIII GGCC 3 cut(s) 232, 1305, 1496
HapII CCGG 1 cut(s) 1257
Hin1II CATG 8 cut(s) 176, 454, 547, 870, 891, 917, 1472, 1547
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HindIII AAGCTT 4 cut(s) 566, 675, 879, 1109
HinfI GANTC 8 cut(s) 13, 202, 923, 997, 1373, 1435, 1452, 1486
HpaI GTTAAC 1 cut(s) 409
HpaII CCGG 1 cut(s) 1257
HphI GGTGA 3 cut(s) 59, 778, 1111
Hpy166II GTNNAC 4 cut(s) 187, 395, 409, 651
Hpy188I TCNGA 2 cut(s) 1402, 1457
Hpy8I GTNNAC 4 cut(s) 187, 395, 409, 651
HpyAV CCTTC 4 cut(s) 130, 519, 706, 887
HpyCH4III ACNGT 7 cut(s) 103, 441, 591, 905, 1354, 1462, 1607
HpyCH4IV ACGT 2 cut(s) 375, 1203
HpyCH4V TGCA 7 cut(s) 119, 365, 527, 547, 554, 812, 1212
HpyF10VI GCNNNNNNNGC 1 cut(s) 1311
HpyF3I CTNAG 5 cut(s) 227, 717, 929, 1169, 1401
HpySE526I ACGT 2 cut(s) 375, 1203
Hsp92II CATG 8 cut(s) 176, 454, 547, 870, 891, 917, 1472, 1547
Kpn2I TCCGGA 1 cut(s) 1256
KspAI GTTAAC 1 cut(s) 409
Kzo9I GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
LmnI GCTCC 3 cut(s) 83, 139, 1124
LweI GCATC 3 cut(s) 106, 128, 1494
MaeI CTAG 8 cut(s) 585, 603, 666, 726, 779, 1595, 1620, 1628
MaeII ACGT 2 cut(s) 375, 1203
MaeIII GTNAC 2 cut(s) 631, 1164
MalI GATC 6 cut(s) 348, 486, 864, 980, 1080, 1557
MboI GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
MboII GAAGA 6 cut(s) 145, 405, 722, 812, 1234, 1550
MfeI CAATTG 1 cut(s) 1358
MflI RGATCY 2 cut(s) 862, 1078
MhlI GDGCHC 3 cut(s) 144, 618, 725
MlsI TGGCCA 1 cut(s) 1496
MluNI TGGCCA 1 cut(s) 1496
MlyI GAGTC 2 cut(s) 932, 1480
MnlI CCTC 9 cut(s) 99, 311, 373, 648, 885, 967, 1316, 1543, 1560
Mox20I TGGCCA 1 cut(s) 1496
Mph1103I ATGCAT 1 cut(s) 121
MroI TCCGGA 1 cut(s) 1256
MroXI GAANNNNTTC 2 cut(s) 773, 1434
MscI TGGCCA 1 cut(s) 1496
MseI TTAA 9 cut(s) 111, 389, 408, 968, 1040, 1136, 1217, 1245, 1265
MslI CAYNNNNRTG 3 cut(s) 621, 1340, 1502
Msp20I TGGCCA 1 cut(s) 1496
MspI CCGG 1 cut(s) 1257
MunI CAATTG 1 cut(s) 1358
MvnI CGCG 1 cut(s) 361
MwoI GCNNNNNNNGC 1 cut(s) 1311
NdeII GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
NlaIII CATG 8 cut(s) 176, 454, 547, 870, 891, 917, 1472, 1547
NlaIV GGNNCC 3 cut(s) 268, 1120, 1304
NmeAIII GCCGAG 2 cut(s) 495, 1573
NmuCI GTSAC 1 cut(s) 1164
NsiI ATGCAT 1 cut(s) 121
NspI RCATGY 1 cut(s) 547
NspV TTCGAA 1 cut(s) 69
OliI CACNNNNGTG 1 cut(s) 1340
PagI TCATGA 1 cut(s) 450
PceI AGGCCT 1 cut(s) 232
PdmI GAANNNNTTC 2 cut(s) 773, 1434
PfeI GAWTC 6 cut(s) 13, 202, 997, 1373, 1435, 1452
PleI GAGTC 2 cut(s) 931, 1480
PpsI GAGTC 2 cut(s) 931, 1480
PshAI GACNNNNGTC 1 cut(s) 297
PshBI ATTAAT 1 cut(s) 1136
PsiI TTATAA 2 cut(s) 762, 837
Psp124BI GAGCTC 2 cut(s) 144, 725
PspFI CCCAGC 1 cut(s) 1299
PspN4I GGNNCC 3 cut(s) 268, 1120, 1304
PspPI GGNCC 2 cut(s) 626, 1303
PsuI RGATCY 2 cut(s) 862, 1078
RsaI GTAC 4 cut(s) 167, 394, 457, 650
RsaNI GTAC 4 cut(s) 166, 393, 456, 649
RseI CAYNNNNRTG 3 cut(s) 621, 1340, 1502
SacI GAGCTC 2 cut(s) 144, 725
SaqAI TTAA 9 cut(s) 111, 389, 408, 968, 1040, 1136, 1217, 1245, 1265
Sau3AI GATC 6 cut(s) 346, 484, 862, 978, 1078, 1555
Sau96I GGNCC 2 cut(s) 626, 1303
ScaI AGTACT 1 cut(s) 457
SchI GAGTC 2 cut(s) 932, 1480
SduI GDGCHC 3 cut(s) 144, 618, 725
SfaNI GCATC 3 cut(s) 106, 128, 1494
SfcI CTRYAG 2 cut(s) 219, 904
SfuI TTCGAA 1 cut(s) 69
SinI GGWCC 1 cut(s) 626
SmiMI CAYNNNNRTG 3 cut(s) 621, 1340, 1502
SmlI CTYRAG 3 cut(s) 876, 1409, 1488
SmoI CTYRAG 3 cut(s) 876, 1409, 1488
SseBI AGGCCT 1 cut(s) 232
SsiI CCGC 2 cut(s) 160, 684
SspI AATATT 1 cut(s) 496
SspMI CTAG 8 cut(s) 585, 603, 666, 726, 779, 1595, 1620, 1628
SstI GAGCTC 2 cut(s) 144, 725
StuI AGGCCT 1 cut(s) 232
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 7 cut(s) 103, 441, 591, 905, 1354, 1462, 1607
TaiI ACGT 2 cut(s) 378, 1206
TaqI TCGA 5 cut(s) 16, 69, 959, 995, 1376
TatI WGTACW 4 cut(s) 165, 392, 455, 648
TfiI GAWTC 6 cut(s) 13, 202, 997, 1373, 1435, 1452
Tru1I TTAA 9 cut(s) 111, 389, 408, 968, 1040, 1136, 1217, 1245, 1265
Tru9I TTAA 9 cut(s) 111, 389, 408, 968, 1040, 1136, 1217, 1245, 1265
TscAI CASTG 2 cut(s) 301, 1357
TseFI GTSAC 1 cut(s) 1164
Tsp45I GTSAC 1 cut(s) 1164
TspDTI ATGAA 6 cut(s) 17, 161, 492, 1078, 1532, 1562
TspGWI ACGGA 2 cut(s) 433, 1111
TspRI CASTG 2 cut(s) 301, 1357
VpaK11BI GGWCC 1 cut(s) 626
VspI ATTAAT 1 cut(s) 1136
XapI RAATTY 4 cut(s) 65, 773, 1260, 1388
XbaI TCTAGA 1 cut(s) 584
XceI RCATGY 1 cut(s) 547
XcmI CCANNNNNNNNNTGG 1 cut(s) 1357
XmnI GAANNNNTTC 2 cut(s) 773, 1434
XspI CTAG 8 cut(s) 585, 603, 666, 726, 779, 1595, 1620, 1628
ZrmI AGTACT 1 cut(s) 457
Zsp2I ATGCAT 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.