RchiOBHm_Chr2g0141431

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
58989873 .. 58990825
953 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51172

Sequence Viewer

Length: 852 bp
ATGACAACCGGCATTAACTATACATCAGATGCCAACTTCATTGACACTGGTGAAATTAAGATGGTATTTCCTGAATACAGAGATAAGAAGCAGCAGCCATACGAGTCTCTTAGGATGTTTCCCGAAGGGATAAGGAACTGCTACAAAATAAATGTTATAAGTCGCAGCAAGTATTTGATCCGAGCATGTTTCTATTACGGGAACTATGATGGTCAAGATAAATCACCAGAATTTGAACTTCATTTTGGTGCTAATTTGTGGGATTCAGTGACTTTTGATGATGCATCCACAGACATAAACAAGGAGCTTATACATTTTGTACCTGATGGAGTCTCAAATGTACATGTTTGTCTTGTGAACACAGGCTTTGGGGTTCCATTTATATCAGGGATAGAGCTGAGGCCTTTATCTAATGAATCGTATGAAGCACAAGTGGGATCCTTGGCACTTGAATGGCTGTATGACACAGGTCTAATGGTTAATACGAGGGGATACAGGTATCCAGAGGATGTTCATGATCGCTTCTGGTATATCTACGAAAGCCTCGACAATTGGGAACAATTAAATACTTCATCCACCATTGACCCTGACAATCAGAACAGCTTTGAATTACCATCTGTTGTTATGAGTACTGCCATCAAGCCAAAAAATGTAAATGAGTCCTTGAATTTTTGTTGGCAGCCTACTGATCAAAGTGCAGAATATTATATTTTCATGCATTTCACAGAAGTTGAAAAGCTCCAACCAAACCAGACTAGATTTCAATACATAACCAAAAATGGAAAATCTAAAATGACCTATTTGCTTTGGAGTACATGTACCCAGCTACTAGTTACAGTAGTAAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

283

Amino Acids

32.9

Weight (kDa)

4.88

Isoelectric Point (pI)

40.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 2 - 265 6.9e-84 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 158
AclWI GGATC 3 cut(s) 172, 432, 445
AcsI RAATTY 2 cut(s) 230, 667
AfaI GTAC 5 cut(s) 321, 342, 631, 814, 820
AflIII ACRYGT 2 cut(s) 343, 815
AgsI TTSAA 6 cut(s) 236, 452, 608, 667, 734, 764
AhlI ACTAGT 1 cut(s) 829
AjuI GAANNNNNNNTTGG 2 cut(s) 228, 260
AluBI AGCT 5 cut(s) 307, 397, 603, 739, 826
AluI AGCT 5 cut(s) 307, 397, 603, 739, 826
Alw26I GTCTC 2 cut(s) 111, 337
AlwI GGATC 3 cut(s) 172, 432, 445
AoxI GGCC 1 cut(s) 401
ApeKI GCWGC 4 cut(s) 91, 94, 165, 679
ApoI RAATTY 2 cut(s) 230, 667
AsuHPI GGTGA 2 cut(s) 62, 216
BamHI GGATCC 1 cut(s) 437
BbvCI CCTCAGC 1 cut(s) 398
BbvI GCAGC 4 cut(s) 103, 106, 177, 691
BccI CCATC 5 cut(s) 55, 203, 320, 622, 644
BciVI GTATCC 2 cut(s) 485, 510
BclI TGATCA 1 cut(s) 688
BcoDI GTCTC 2 cut(s) 111, 337
BcuI ACTAGT 1 cut(s) 829
BfaI CTAG 2 cut(s) 756, 830
BfuI GTATCC 2 cut(s) 485, 510
BisI GCNGC 4 cut(s) 92, 95, 166, 680
BlsI GCNGC 4 cut(s) 93, 96, 167, 681
BmcAI AGTACT 1 cut(s) 631
BmiI GGNNCC 2 cut(s) 375, 439
BmsI GCATC 3 cut(s) 19, 271, 293
BoxI GACNNNNGTC 1 cut(s) 468
Bpu10I CCTNAGC 1 cut(s) 398
BsaJI CCNNGG 1 cut(s) 441
BsaXI ACNNNNNCTCC 2 cut(s) 802, 832
Bse118I RCCGGY 1 cut(s) 8
Bse1I ACTGG 1 cut(s) 52
BseDI CCNNGG 1 cut(s) 441
BseGI GGATG 4 cut(s) 120, 284, 514, 572
BseMII CTCAG 1 cut(s) 389
BseNI ACTGG 1 cut(s) 52
BseXI GCAGC 4 cut(s) 103, 106, 177, 691
BseYI CCCAGC 1 cut(s) 822
BsgI GTGCAG 1 cut(s) 717
BshFI GGCC 1 cut(s) 403
BsiSI CCGG 1 cut(s) 9
BsmAI GTCTC 2 cut(s) 111, 337
BsnI GGCC 1 cut(s) 403
Bsp1407I TGTACA 1 cut(s) 340
Bsp143I GATC 4 cut(s) 177, 437, 517, 688
BspANI GGCC 1 cut(s) 403
BspCNI CTCAG 1 cut(s) 390
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 2 cut(s) 375, 439
BspPI GGATC 3 cut(s) 172, 432, 445
BsrFI RCCGGY 1 cut(s) 8
BsrGI TGTACA 1 cut(s) 340
BsrI ACTGG 1 cut(s) 52
BssAI RCCGGY 1 cut(s) 8
BssECI CCNNGG 1 cut(s) 441
BssMI GATC 4 cut(s) 177, 437, 517, 688
BssT1I CCWWGG 1 cut(s) 441
Bst4CI ACNGT 1 cut(s) 838
BstAUI TGTACA 1 cut(s) 340
BstDEI CTNAG 2 cut(s) 110, 398
BstF5I GGATG 4 cut(s) 120, 284, 514, 572
BstKTI GATC 4 cut(s) 180, 440, 520, 691
BstMAI GTCTC 2 cut(s) 111, 337
BstMBI GATC 4 cut(s) 177, 437, 517, 688
BstNSI RCATGY 3 cut(s) 189, 347, 819
BstPAI GACNNNNGTC 1 cut(s) 468
BstV1I GCAGC 4 cut(s) 103, 106, 177, 691
BstX2I RGATCY 1 cut(s) 437
BstYI RGATCY 1 cut(s) 437
BsuI GTATCC 2 cut(s) 485, 510
BsuRI GGCC 1 cut(s) 403
BtsCI GGATG 4 cut(s) 120, 284, 514, 572
BtsIMutI CAGTG 2 cut(s) 45, 273
CciI TCATGA 1 cut(s) 514
Cfr10I RCCGGY 1 cut(s) 8
Csp6I GTAC 5 cut(s) 320, 341, 630, 813, 819
CviAII CATG 5 cut(s) 186, 344, 515, 715, 816
CviQI GTAC 5 cut(s) 320, 341, 630, 813, 819
DdeI CTNAG 2 cut(s) 110, 398
DpnI GATC 4 cut(s) 179, 439, 519, 690
DpnII GATC 4 cut(s) 177, 437, 517, 688
Eco130I CCWWGG 1 cut(s) 441
Eco147I AGGCCT 1 cut(s) 403
EcoT14I CCWWGG 1 cut(s) 441
EcoT22I ATGCAT 2 cut(s) 286, 720
ErhI CCWWGG 1 cut(s) 441
FaeI CATG 5 cut(s) 189, 347, 518, 718, 819
FatI CATG 5 cut(s) 185, 343, 514, 714, 815
FbaI TGATCA 1 cut(s) 688
Fnu4HI GCNGC 4 cut(s) 92, 95, 166, 680
FokI GGATG 4 cut(s) 127, 271, 521, 559
Fsp4HI GCNGC 4 cut(s) 92, 95, 166, 680
FspBI CTAG 2 cut(s) 756, 830
GluI GCNGC 4 cut(s) 92, 95, 166, 680
GsaI CCCAGC 1 cut(s) 826
HaeIII GGCC 1 cut(s) 403
HapII CCGG 1 cut(s) 9
Hin1II CATG 5 cut(s) 189, 347, 518, 718, 819
HinfI GANTC 5 cut(s) 104, 263, 330, 416, 659
HpaII CCGG 1 cut(s) 9
HphI GGTGA 2 cut(s) 62, 216
Hpy166II GTNNAC 1 cut(s) 358
Hpy188I TCNGA 3 cut(s) 28, 182, 597
Hpy188III TCNNGA 5 cut(s) 71, 122, 215, 503, 515
Hpy8I GTNNAC 1 cut(s) 358
HpyAV CCTTC 1 cut(s) 119
HpyCH4III ACNGT 1 cut(s) 838
HpyCH4V TGCA 3 cut(s) 284, 698, 718
HpyF3I CTNAG 2 cut(s) 110, 398
Hsp92II CATG 5 cut(s) 189, 347, 518, 718, 819
Ksp22I TGATCA 1 cut(s) 688
Kzo9I GATC 4 cut(s) 177, 437, 517, 688
LmnI GCTCC 2 cut(s) 304, 744
Lsp1109I GCAGC 4 cut(s) 103, 106, 177, 691
LweI GCATC 3 cut(s) 19, 271, 293
MaeI CTAG 2 cut(s) 756, 830
MaeIII GTNAC 2 cut(s) 268, 832
MalI GATC 4 cut(s) 179, 439, 519, 690
MboI GATC 4 cut(s) 177, 437, 517, 688
MfeI CAATTG 1 cut(s) 550
MflI RGATCY 1 cut(s) 437
MluCI AATT 7 cut(s) 54, 230, 253, 550, 560, 608, 667
MlyI GAGTC 3 cut(s) 113, 339, 668
MmeI TCCRAC 1 cut(s) 766
MnlI CCTC 4 cut(s) 393, 480, 499, 554
Mph1103I ATGCAT 2 cut(s) 286, 720
MseI TTAA 4 cut(s) 15, 57, 480, 563
MslI CAYNNNNRTG 2 cut(s) 246, 451
MspI CCGG 1 cut(s) 9
MunI CAATTG 1 cut(s) 550
NdeII GATC 4 cut(s) 177, 437, 517, 688
NlaIII CATG 5 cut(s) 189, 347, 518, 718, 819
NlaIV GGNNCC 2 cut(s) 375, 439
NmuCI GTSAC 1 cut(s) 268
NsiI ATGCAT 2 cut(s) 286, 720
NspI RCATGY 3 cut(s) 189, 347, 819
PagI TCATGA 1 cut(s) 514
PceI AGGCCT 1 cut(s) 403
PciI ACATGT 2 cut(s) 343, 815
PcsI WCGNNNNNNNCGW 1 cut(s) 543
PfeI GAWTC 2 cut(s) 263, 416
PkrI GCNGC 4 cut(s) 93, 96, 167, 681
PleI GAGTC 3 cut(s) 112, 338, 667
PpsI GAGTC 3 cut(s) 112, 338, 667
PscI ACATGT 2 cut(s) 343, 815
PshAI GACNNNNGTC 1 cut(s) 468
PsiI TTATAA 1 cut(s) 158
PspFI CCCAGC 1 cut(s) 822
PspN4I GGNNCC 2 cut(s) 375, 439
PsuI RGATCY 1 cut(s) 437
RsaI GTAC 5 cut(s) 321, 342, 631, 814, 820
RsaNI GTAC 5 cut(s) 320, 341, 630, 813, 819
RseI CAYNNNNRTG 2 cut(s) 246, 451
SaqAI TTAA 4 cut(s) 15, 57, 480, 563
SatI GCNGC 4 cut(s) 92, 95, 166, 680
Sau3AI GATC 4 cut(s) 177, 437, 517, 688
ScaI AGTACT 1 cut(s) 631
SchI GAGTC 3 cut(s) 113, 339, 668
SetI ASST 9 cut(s) 309, 325, 399, 472, 500, 605, 741, 800, 828
SfaNI GCATC 3 cut(s) 19, 271, 293
SmiMI CAYNNNNRTG 2 cut(s) 246, 451
SpeI ACTAGT 1 cut(s) 829
Sse9I AATT 7 cut(s) 54, 230, 253, 550, 560, 608, 667
SseBI AGGCCT 1 cut(s) 403
SspI AATATT 1 cut(s) 704
SspMI CTAG 2 cut(s) 756, 830
StuI AGGCCT 1 cut(s) 403
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 1 cut(s) 838
TaqI TCGA 1 cut(s) 546
TasI AATT 7 cut(s) 54, 230, 253, 550, 560, 608, 667
TatI WGTACW 3 cut(s) 340, 629, 812
TfiI GAWTC 2 cut(s) 263, 416
Tru1I TTAA 4 cut(s) 15, 57, 480, 563
Tru9I TTAA 4 cut(s) 15, 57, 480, 563
TscAI CASTG 2 cut(s) 52, 273
TseFI GTSAC 1 cut(s) 268
TseI GCWGC 4 cut(s) 91, 94, 165, 679
Tsp45I GTSAC 1 cut(s) 268
TspDTI ATGAA 7 cut(s) 28, 230, 429, 438, 503, 561, 703
TspRI CASTG 2 cut(s) 52, 273
XapI RAATTY 2 cut(s) 230, 667
XceI RCATGY 3 cut(s) 189, 347, 819
XspI CTAG 2 cut(s) 756, 830
ZrmI AGTACT 1 cut(s) 631
Zsp2I ATGCAT 2 cut(s) 286, 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.