Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0000083

Physical Location & Seq

Genomic Coordinates Forward (+)

18793111 .. 18796173

Gene Structure 3063 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGGTGGGAGTCCTCTTCTACTCACGATCATGATCACCCTTTCTGCTTTCTTCTCAGAAACAGAGTCGACATCTTTCGAGATTGTGAACAACTGCAACTACACAATCTGGCCCGGACTTCGCTCCACCGGCTCATCACTAAACCTGTCCACCACCGGCTTCACGCTCAGGAGCGGCGCGTCCTTCAACCTCTCCGTCCCCAAATCCTGGACAGGTCAGGTGTGGGGACGGACACTCTGCAACGAATCCTCCACCGGAAACTTCTCCTGTTTCACCGCCGACTGCGGCACCGGAAAAGTCGAGTGCGACGGAAATGGCGCCATCCCGCCTGCTACTTTTGCTGAATTCGAACTCAACAACTTCGGCTCCGGCGTGGACTACTATGACGTCAGCCTGGTCACTGGGTTCAACCTCCCGATGGTGGTGGAGCCTCGCGGAGCAGGCAGCAACCACTGCATCTCTTCTGGATGCTCGGCCGACTTGAACGGCGATTGTCCCAAGGAGCTGAGGGTGGCGCGTGAGGGGAGCCAAGGGACCGTGGCGTGCATGACGCCGTGCACGGCGTTCAATAATTCGCGGTTTTGTTGTACCGGGGAGTATAGTACACCCGCCTCGTGTTCTGGGACCGTATATACCGATTATTTCAAACAAAGATGCCCAAAGGCGTACACGTATGCGTTTGATTTGACGCCTTATGCCAACCAGACTACGTTTACGTACAGCTGTGCGACAGCTAACTACAGCGTTGTTTTCTGCCCTATCAGTTTACCAGCTGAAACACAAGCAGAAACACCAGCCAAAGAACCAACTGTATCCGAACAGGTTCCTTCGAAAAGTAAAAACCACACAATCATGATTGCCTCTATAGCGTCAAGTGCTGGGATTATCATCTTCATATTAGCGGTGGTAGCAGGCCTATGGAGCAGTAGAAGGAAGAGACAACAAGAGATCCAAAATAGTTCATTGGAGTTGGAGGATGGTCGACGCTTTATGTACTCGGAGCTTGTAAAGATTACCAATAATTTTGCATCGCCAATTGGAGCAGGTGGGTTTGGAAAAGTCTATCATGGTATTCTGGAAAATGATATTCAAGTTGCTGTCAAGTTACTTGTCTCCGCATCAGGCTCCAGTGAATTTCAAAATGAGGTTAAGCTATTGATGAGAGCTCATCATAGAAATGTGGTTTCCTTCACTGGCTACTGCTATGATGGAAAGACTATGGCACTTGTATTTGAATATGTTGCCAATGGAAATTTACATCAACATTTAACAGCTTCAGATGTAGATACAGGAAACATTTTGACTTGGAAGGAGAGACTTCATATCGCAGTGGATGCAGCACAAGGACTGGATTATCTACATAATGGTTGCAAGCCTCCCATAATCCACAGAGATATAAAGACCTCCAATATATTGTTAACTGAAAAGATGCAAGCCAAGATATGTGATTTTGGTGTTTCCAAACTTCTTTCAACTGAAACCGCCACTCATACCATGACAGATCACGTCAGAGGAACTAGAGGATACTTTGATCCTGAATACTACACCACAGGAAAGCTGAACAAAAAGAGTGATATATACAGCTTTGGTATTGTGTTGCTAGAACTAATCACGGGCAGAACAGCAATAATAGAAGATGTAGAACCCGAACCTGTTCACATATGTCAATGGGTGAGGCCTATGTTTCAGAGAAGAGATATTGAAAGTATATTGGATTCAAGGATACAAGCAGGGACTTACAACGTTTCCTCTGCTTGGAAGGCGGTAGAAATCGCCATGGAATGTGTGTCATCAACAGCTTTCGAAAGACCAGATATCAATGTTGTGTATAAGGAACTGAAGGAATGTTTTGAAATTGAGGTTCCACCTGAAATAGCAAAGGTTCCAGAGGTTGATGAAGAGAGTGATGATTGCAGTACTAATTCAAGTGTTTCTTTTCACATGGCGTCCCACGCTGAGTCTGAAAGCTTCTTAGTTCATATGAAGTCACACATTGAGTCTGAAACTGAAAGGCATACGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Thaumatin

Protein Analysis

675

Amino Acids

74.0

Weight (kDa)

5.36

Isoelectric Point (pI)

42.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thaumatin	PF00314	30 - 253	1.3e-68	Thaumatin family
PK_Tyr_Ser-Thr	PF07714	343 - 558	1.1e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	344 - 546	3.6e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca	FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica	MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica	Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis	pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis	RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata	RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora	Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii	Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa	Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha	Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana	Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1034
AatII	GACGTC	1 cut(s)	390
Acc36I	ACCTGC	1 cut(s)	1034
AccB1I	GGYRCC	2 cut(s)	287, 317
AccB7I	CCANNNNNTGG	1 cut(s)	207
AccBSI	CCGCTC	1 cut(s)	174
AccI	GTMKAC	2 cut(s)	68, 982
AccII	CGCG	4 cut(s)	179, 435, 517, 577
AclI	AACGTT	1 cut(s)	1743
AclWI	GGATC	2 cut(s)	943, 1526
AcoI	YGGCCR	1 cut(s)	474
AcsI	RAATTY	3 cut(s)	344, 1133, 1252
AcuI	CTGAAG	2 cut(s)	1260, 1859
AcyI	GRCGYC	5 cut(s)	318, 387, 551, 689, 1946
AfaI	GTAC	6 cut(s)	589, 604, 668, 719, 995, 1918
AfiI	CCNNNNNNNGG	4 cut(s)	207, 418, 421, 1755
AflIII	ACRYGT	2 cut(s)	669, 2018
AjiI	CACGTC	1 cut(s)	1507
AjnI	CCWGG	2 cut(s)	206, 393
Alw21I	GWGCWC	2 cut(s)	560, 1168
Alw26I	GTCTC	3 cut(s)	931, 1117, 1309
Alw44I	GTGCAC	1 cut(s)	556
AlwI	GGATC	2 cut(s)	943, 1526
AoxI	GGCC	4 cut(s)	110, 474, 913, 1676
ApaLI	GTGCAC	1 cut(s)	556
ApeKI	GCWGC	2 cut(s)	444, 1337
ApoI	RAATTY	3 cut(s)	344, 1133, 1252
Asp700I	GAANNNNTTC	2 cut(s)	822, 1653
AspLEI	GCGC	3 cut(s)	179, 320, 517
AspS9I	GGNCC	3 cut(s)	111, 534, 624
AsuC2I	CCSGG	2 cut(s)	114, 592
AsuHPI	GGTGA	3 cut(s)	28, 265, 1684
AsuII	TTCGAA	3 cut(s)	348, 830, 1803
AvaII	GGWCC	2 cut(s)	534, 624
BaeGI	GKGCMC	1 cut(s)	560
BanI	GGYRCC	2 cut(s)	287, 317
BanII	GRGCYC	1 cut(s)	1168
BauI	CACGAG	1 cut(s)	613
Bbv12I	GWGCWC	2 cut(s)	560, 1168
BbvCI	CCTCAGC	1 cut(s)	506
BbvI	GCAGC	2 cut(s)	456, 1349
BccI	CCATC	4 cut(s)	329, 412, 971, 1202
BceAI	ACGGC	3 cut(s)	502, 538, 576
BciT130I	CCWGG	2 cut(s)	208, 395
BciVI	GTATCC	3 cut(s)	823, 1517, 1716
BclI	TGATCA	1 cut(s)	33
BcnI	CCSGG	2 cut(s)	114, 592
BcoDI	GTCTC	3 cut(s)	931, 1117, 1309
BfaI	CTAG	2 cut(s)	1518, 1601
BfmI	CTRYAG	2 cut(s)	739, 864
BfoI	RGCGCY	1 cut(s)	321
BfuAI	ACCTGC	1 cut(s)	1034
BfuI	GTATCC	3 cut(s)	823, 1517, 1716
BisI	GCNGC	4 cut(s)	175, 286, 445, 1338
BlsI	GCNGC	4 cut(s)	176, 287, 446, 1339
BmcAI	AGTACT	1 cut(s)	1918
Bme1390I	CCNGG	4 cut(s)	114, 208, 395, 592
Bme18I	GGWCC	2 cut(s)	534, 624
BmgBI	CACGTC	1 cut(s)	1507
BmgT120I	GGNCC	3 cut(s)	111, 534, 624
BmrFI	CCNGG	4 cut(s)	114, 208, 395, 592
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	7 cut(s)	458, 465, 644, 1037, 1127, 1324, 1419
BmuI	ACTGGG	1 cut(s)	411
BpmI	CTGGAG	1 cut(s)	1111
Bpu10I	CCTNAGC	2 cut(s)	167, 506
Bpu14I	TTCGAA	3 cut(s)	348, 830, 1803
BpuMI	CCSGG	2 cut(s)	114, 592
BsaAI	YACGTR	3 cut(s)	672, 717, 2019
BsaBI	GATNNNNATC	2 cut(s)	32, 887
BsaHI	GRCGYC	5 cut(s)	318, 387, 551, 689, 1946
BsaJI	CCNNGG	5 cut(s)	498, 529, 537, 591, 1776
BsaWI	WCCGGW	2 cut(s)	254, 290
BsaXI	ACNNNNNCTCC	4 cut(s)	233, 263, 350, 380
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 418, 421, 1755
Bse118I	RCCGGY	2 cut(s)	128, 155
Bse1I	ACTGG	4 cut(s)	406, 1128, 1198, 1353
Bse8I	GATNNNNATC	2 cut(s)	32, 887
BseBI	CCWGG	2 cut(s)	208, 395
BseDI	CCNNGG	5 cut(s)	498, 529, 537, 591, 1776
BseGI	GGATG	4 cut(s)	321, 473, 982, 1339
BseJI	GATNNNNATC	2 cut(s)	32, 887
BseLI	CCNNNNNNNGG	4 cut(s)	207, 418, 421, 1755
BseMII	CTCAG	4 cut(s)	69, 181, 497, 1947
BseNI	ACTGG	4 cut(s)	406, 1128, 1198, 1353
BseSI	GKGCMC	1 cut(s)	560
BseX3I	CGGCCG	1 cut(s)	474
BseXI	GCAGC	2 cut(s)	456, 1349
BseYI	CCCAGC	1 cut(s)	878
Bsh1236I	CGCG	4 cut(s)	179, 435, 517, 577
Bsh1285I	CGRYCG	1 cut(s)	477
BshFI	GGCC	4 cut(s)	112, 476, 915, 1678
BshNI	GGYRCC	2 cut(s)	287, 317
BsiEI	CGRYCG	1 cut(s)	477
BsiHKAI	GWGCWC	2 cut(s)	560, 1168
BsiSI	CCGG	7 cut(s)	114, 129, 156, 255, 291, 369, 591
BslFI	GGGAC	7 cut(s)	182, 240, 480, 547, 637, 1747, 1933
BslI	CCNNNNNNNGG	4 cut(s)	207, 418, 421, 1755
BsmAI	GTCTC	3 cut(s)	931, 1117, 1309
BsmFI	GGGAC	7 cut(s)	182, 240, 480, 547, 637, 1747, 1933
BsnI	GGCC	4 cut(s)	112, 476, 915, 1678
Bsp119I	TTCGAA	3 cut(s)	348, 830, 1803
Bsp1286I	GDGCHC	2 cut(s)	560, 1168
Bsp143I	GATC	5 cut(s)	27, 33, 948, 1501, 1531
Bsp19I	CCATGG	1 cut(s)	1776
BspANI	GGCC	4 cut(s)	112, 476, 915, 1678
BspCNI	CTCAG	4 cut(s)	68, 180, 498, 1948
BspFNI	CGCG	4 cut(s)	179, 435, 517, 577
BspHI	TCATGA	2 cut(s)	30, 852
BspMI	ACCTGC	1 cut(s)	1034
BspPI	GGATC	2 cut(s)	943, 1526
BspT104I	TTCGAA	3 cut(s)	348, 830, 1803
BspT107I	GGYRCC	2 cut(s)	287, 317
BsrBI	CCGCTC	1 cut(s)	174
BsrFI	RCCGGY	2 cut(s)	128, 155
BsrI	ACTGG	4 cut(s)	406, 1128, 1198, 1353
BssAI	RCCGGY	2 cut(s)	128, 155
BssECI	CCNNGG	5 cut(s)	498, 529, 537, 591, 1776
BssMI	GATC	5 cut(s)	27, 33, 948, 1501, 1531
BssNI	GRCGYC	5 cut(s)	318, 387, 551, 689, 1946
BssSI	CACGAG	1 cut(s)	613
BssT1I	CCWWGG	3 cut(s)	498, 529, 1776
Bst2BI	CACGAG	1 cut(s)	613
Bst2UI	CCWGG	2 cut(s)	208, 395
Bst4CI	ACNGT	3 cut(s)	538, 628, 811
Bst6I	CTCTTC	5 cut(s)	21, 466, 929, 1687, 1893
BstACI	GRCGYC	5 cut(s)	318, 387, 551, 689, 1946
BstAPI	GCANNNNNTGC	2 cut(s)	453, 1334
BstBAI	YACGTR	3 cut(s)	672, 717, 2019
BstBI	TTCGAA	3 cut(s)	348, 830, 1803
BstC8I	GCNNGC	6 cut(s)	330, 442, 544, 913, 1373, 1434
BstDEI	CTNAG	5 cut(s)	55, 167, 506, 1956, 1972
BstDSI	CCRYGG	2 cut(s)	537, 1776
BstF5I	GGATG	4 cut(s)	321, 473, 982, 1339
BstFNI	CGCG	4 cut(s)	179, 435, 517, 577
BstH2I	RGCGCY	1 cut(s)	321
BstHHI	GCGC	3 cut(s)	179, 320, 517
BstKTI	GATC	5 cut(s)	30, 36, 951, 1504, 1534
BstMAI	GTCTC	3 cut(s)	931, 1117, 1309
BstMBI	GATC	5 cut(s)	27, 33, 948, 1501, 1531
BstMCI	CGRYCG	1 cut(s)	477
BstNI	CCWGG	2 cut(s)	208, 395
BstSCI	CCNGG	4 cut(s)	112, 206, 393, 590
BstSFI	CTRYAG	2 cut(s)	739, 864
BstSLI	GKGCMC	1 cut(s)	560
BstSNI	TACGTA	1 cut(s)	717
BstUI	CGCG	4 cut(s)	179, 435, 517, 577
BstV1I	GCAGC	2 cut(s)	456, 1349
BstX2I	RGATCY	1 cut(s)	948
BstYI	RGATCY	1 cut(s)	948
BstZI	CGGCCG	1 cut(s)	474
BsuI	GTATCC	3 cut(s)	823, 1517, 1716
BsuRI	GGCC	4 cut(s)	112, 476, 915, 1678
BtgI	CCRYGG	2 cut(s)	537, 1776
BtgZI	GCGATG	1 cut(s)	1014
BtrI	CACGTC	1 cut(s)	1507
BtsCI	GGATG	4 cut(s)	321, 473, 982, 1339
BtsI	GCAGTG	2 cut(s)	451, 1335
BtsIMutI	CAGTG	5 cut(s)	399, 451, 1135, 1191, 1335
BveI	ACCTGC	1 cut(s)	1034
Cac8I	GCNNGC	6 cut(s)	330, 442, 544, 913, 1373, 1434
CciI	TCATGA	2 cut(s)	30, 852
CfoI	GCGC	3 cut(s)	179, 320, 517
Cfr10I	RCCGGY	2 cut(s)	128, 155
Cfr13I	GGNCC	3 cut(s)	111, 534, 624
CseI	GACGC	6 cut(s)	168, 559, 697, 858, 993, 1935
Csp6I	GTAC	6 cut(s)	588, 603, 667, 718, 994, 1917
CviAII	CATG	7 cut(s)	31, 547, 853, 1067, 1495, 1777, 1942
CviQI	GTAC	6 cut(s)	588, 603, 667, 718, 994, 1917
DdeI	CTNAG	5 cut(s)	55, 167, 506, 1956, 1972
DinI	GGCGCC	1 cut(s)	319
DpnI	GATC	5 cut(s)	29, 35, 950, 1503, 1533
DpnII	GATC	5 cut(s)	27, 33, 948, 1501, 1531
EaeI	YGGCCR	1 cut(s)	474
EagI	CGGCCG	1 cut(s)	474
Eam1104I	CTCTTC	5 cut(s)	21, 466, 929, 1687, 1893
EarI	CTCTTC	5 cut(s)	21, 466, 929, 1687, 1893
Ecl136II	GAGCTC	1 cut(s)	1166
EclXI	CGGCCG	1 cut(s)	474
Eco105I	TACGTA	1 cut(s)	717
Eco130I	CCWWGG	3 cut(s)	498, 529, 1776
Eco147I	AGGCCT	2 cut(s)	915, 1678
Eco24I	GRGCYC	1 cut(s)	1168
Eco32I	GATATC	1 cut(s)	1816
Eco47I	GGWCC	2 cut(s)	534, 624
Eco52I	CGGCCG	1 cut(s)	474
Eco53kI	GAGCTC	1 cut(s)	1166
Eco57I	CTGAAG	2 cut(s)	1260, 1859
EcoICRI	GAGCTC	1 cut(s)	1166
EcoRI	GAATTC	1 cut(s)	344
EcoRII	CCWGG	2 cut(s)	206, 393
EcoRV	GATATC	1 cut(s)	1816
EcoT14I	CCWWGG	3 cut(s)	498, 529, 1776
EcoT38I	GRGCYC	1 cut(s)	1168
EgeI	GGCGCC	1 cut(s)	319
EheI	GGCGCC	1 cut(s)	319
ErhI	CCWWGG	3 cut(s)	498, 529, 1776
FaeI	CATG	7 cut(s)	34, 550, 856, 1070, 1498, 1780, 1945
FalI	AAGNNNNNCTT	2 cut(s)	1918, 1950
FaqI	GGGAC	7 cut(s)	182, 240, 480, 547, 637, 1747, 1933
FatI	CATG	7 cut(s)	30, 546, 852, 1066, 1494, 1776, 1941
FauI	CCCGC	2 cut(s)	333, 616
FauNDI	CATATG	2 cut(s)	1661, 1980
FbaI	TGATCA	1 cut(s)	33
FblI	GTMKAC	2 cut(s)	68, 982
Fnu4HI	GCNGC	4 cut(s)	175, 286, 445, 1338
FokI	GGATG	4 cut(s)	308, 480, 989, 1346
FriOI	GRGCYC	1 cut(s)	1168
Fsp4HI	GCNGC	4 cut(s)	175, 286, 445, 1338
FspBI	CTAG	2 cut(s)	1518, 1601
GlaI	GCGC	3 cut(s)	178, 319, 516
GluI	GCNGC	4 cut(s)	175, 286, 445, 1338
GsaI	CCCAGC	1 cut(s)	882
GsuI	CTGGAG	1 cut(s)	1111
HaeII	RGCGCY	1 cut(s)	321
HaeIII	GGCC	4 cut(s)	112, 476, 915, 1678
HapII	CCGG	7 cut(s)	114, 129, 156, 255, 291, 369, 591
HgaI	GACGC	6 cut(s)	168, 559, 697, 858, 993, 1935
HhaI	GCGC	3 cut(s)	179, 320, 517
Hin1I	GRCGYC	5 cut(s)	318, 387, 551, 689, 1946
Hin1II	CATG	7 cut(s)	34, 550, 856, 1070, 1498, 1780, 1945
Hin6I	GCGC	3 cut(s)	177, 318, 515
HinP1I	GCGC	3 cut(s)	177, 318, 515
HincII	GTYRAC	3 cut(s)	69, 983, 1419
HindII	GTYRAC	3 cut(s)	69, 983, 1419
HindIII	AAGCTT	1 cut(s)	1966
HinfI	GANTC	6 cut(s)	10, 65, 245, 1715, 1958, 1997
HpaI	GTTAAC	1 cut(s)	1419
HpaII	CCGG	7 cut(s)	114, 129, 156, 255, 291, 369, 591
HphI	GGTGA	3 cut(s)	28, 265, 1684
Hpy188I	TCNGA	8 cut(s)	58, 817, 1000, 1279, 1511, 1689, 1963, 2002
Hpy99I	CGWCG	2 cut(s)	311, 987
HpyAV	CCTTC	7 cut(s)	193, 837, 924, 1198, 1303, 1753, 1834
HpyCH4III	ACNGT	3 cut(s)	538, 628, 811
HpyCH4IV	ACGT	7 cut(s)	387, 671, 710, 716, 1506, 1743, 2018
HpyF3I	CTNAG	5 cut(s)	55, 167, 506, 1956, 1972
HpySE526I	ACGT	7 cut(s)	387, 671, 710, 716, 1506, 1743, 2018
Hsp92I	GRCGYC	5 cut(s)	318, 387, 551, 689, 1946
Hsp92II	CATG	7 cut(s)	34, 550, 856, 1070, 1498, 1780, 1945
HspAI	GCGC	3 cut(s)	177, 318, 515
KasI	GGCGCC	1 cut(s)	317
Ksp22I	TGATCA	1 cut(s)	33
KspAI	GTTAAC	1 cut(s)	1419
Kzo9I	GATC	5 cut(s)	27, 33, 948, 1501, 1531
Lsp1109I	GCAGC	2 cut(s)	456, 1349
LweI	GCATC	7 cut(s)	458, 465, 644, 1037, 1127, 1324, 1419
MaeI	CTAG	2 cut(s)	1518, 1601
MaeII	ACGT	7 cut(s)	387, 671, 710, 716, 1506, 1743, 2018
MaeIII	GTNAC	3 cut(s)	397, 1104, 1986
MalI	GATC	5 cut(s)	29, 35, 950, 1503, 1533
MbiI	CCGCTC	1 cut(s)	174
MboI	GATC	5 cut(s)	27, 33, 948, 1501, 1531
MboII	GAAGA	8 cut(s)	8, 43, 453, 883, 946, 1646, 1704, 1910
MfeI	CAATTG	1 cut(s)	1035
MflI	RGATCY	1 cut(s)	948
MhlI	GDGCHC	2 cut(s)	560, 1168
MluCI	AATT	8 cut(s)	344, 571, 1021, 1035, 1133, 1252, 1854, 1921
Mly113I	GGCGCC	1 cut(s)	318
MlyI	GAGTC	4 cut(s)	19, 74, 1967, 2006
MmeI	TCCRAC	1 cut(s)	951
MroXI	GAANNNNTTC	2 cut(s)	822, 1653
MseI	TTAA	3 cut(s)	1149, 1268, 1418
MslI	CAYNNNNRTG	3 cut(s)	29, 851, 1176
MspA1I	CMGCKG	2 cut(s)	723, 773
MspI	CCGG	7 cut(s)	114, 129, 156, 255, 291, 369, 591
MspR9I	CCNGG	4 cut(s)	114, 208, 395, 592
MunI	CAATTG	1 cut(s)	1035
MvaI	CCWGG	2 cut(s)	208, 395
MvnI	CGCG	4 cut(s)	179, 435, 517, 577
NarI	GGCGCC	1 cut(s)	318
NciI	CCSGG	2 cut(s)	114, 592
NcoI	CCATGG	1 cut(s)	1776
NdeI	CATATG	2 cut(s)	1661, 1980
NdeII	GATC	5 cut(s)	27, 33, 948, 1501, 1531
NlaIII	CATG	7 cut(s)	34, 550, 856, 1070, 1498, 1780, 1945
NmeAIII	GCCGAG	1 cut(s)	452
NmuCI	GTSAC	2 cut(s)	397, 1986
NspV	TTCGAA	3 cut(s)	348, 830, 1803
PagI	TCATGA	2 cut(s)	30, 852
PaqCI	CACCTGC	1 cut(s)	1034
PceI	AGGCCT	2 cut(s)	915, 1678
PcsI	WCGNNNNNNNCGW	1 cut(s)	369
PdmI	GAANNNNTTC	2 cut(s)	822, 1653
PfeI	GAWTC	2 cut(s)	245, 1715
PflMI	CCANNNNNTGG	1 cut(s)	207
PfoI	TCCNGGA	1 cut(s)	206
PkrI	GCNGC	4 cut(s)	176, 287, 446, 1339
PleI	GAGTC	4 cut(s)	18, 73, 1966, 2005
PluTI	GGCGCC	1 cut(s)	321
PpsI	GAGTC	4 cut(s)	18, 73, 1966, 2005
Ppu21I	YACGTR	3 cut(s)	672, 717, 2019
Psp124BI	GAGCTC	1 cut(s)	1168
Psp1406I	AACGTT	1 cut(s)	1743
Psp6I	CCWGG	2 cut(s)	206, 393
PspFI	CCCAGC	1 cut(s)	878
PspGI	CCWGG	2 cut(s)	206, 393
PspPI	GGNCC	3 cut(s)	111, 534, 624
PsuI	RGATCY	1 cut(s)	948
PvuII	CAGCTG	2 cut(s)	723, 773
RsaI	GTAC	6 cut(s)	589, 604, 668, 719, 995, 1918
RsaNI	GTAC	6 cut(s)	588, 603, 667, 718, 994, 1917
RseI	CAYNNNNRTG	3 cut(s)	29, 851, 1176
SacI	GAGCTC	1 cut(s)	1168
SalI	GTCGAC	2 cut(s)	67, 981
SaqAI	TTAA	3 cut(s)	1149, 1268, 1418
SatI	GCNGC	4 cut(s)	175, 286, 445, 1338
Sau3AI	GATC	5 cut(s)	27, 33, 948, 1501, 1531
Sau96I	GGNCC	3 cut(s)	111, 534, 624
ScaI	AGTACT	1 cut(s)	1918
SchI	GAGTC	4 cut(s)	19, 74, 1967, 2006
ScrFI	CCNGG	4 cut(s)	114, 208, 395, 592
SduI	GDGCHC	2 cut(s)	560, 1168
SfaNI	GCATC	7 cut(s)	458, 465, 644, 1037, 1127, 1324, 1419
SfcI	CTRYAG	2 cut(s)	739, 864
SfoI	GGCGCC	1 cut(s)	319
SfuI	TTCGAA	3 cut(s)	348, 830, 1803
SinI	GGWCC	2 cut(s)	534, 624
SmiMI	CAYNNNNRTG	3 cut(s)	29, 851, 1176
SnaBI	TACGTA	1 cut(s)	717
Sse9I	AATT	8 cut(s)	344, 571, 1021, 1035, 1133, 1252, 1854, 1921
SseBI	AGGCCT	2 cut(s)	915, 1678
SspDI	GGCGCC	1 cut(s)	317
SspMI	CTAG	2 cut(s)	1518, 1601
SstI	GAGCTC	1 cut(s)	1168
StuI	AGGCCT	2 cut(s)	915, 1678
StyD4I	CCNGG	4 cut(s)	112, 206, 393, 590
StyI	CCWWGG	3 cut(s)	498, 529, 1776
TaaI	ACNGT	3 cut(s)	538, 628, 811
TaiI	ACGT	7 cut(s)	390, 674, 713, 719, 1509, 1746, 2021
TaqI	TCGA	7 cut(s)	68, 78, 300, 348, 830, 982, 1803
TasI	AATT	8 cut(s)	344, 571, 1021, 1035, 1133, 1252, 1854, 1921
TatI	WGTACW	3 cut(s)	602, 993, 1916
TauI	GCSGC	2 cut(s)	177, 288
TfiI	GAWTC	2 cut(s)	245, 1715
Tru1I	TTAA	3 cut(s)	1149, 1268, 1418
Tru9I	TTAA	3 cut(s)	1149, 1268, 1418
TscAI	CASTG	5 cut(s)	406, 458, 1135, 1198, 1335
TseFI	GTSAC	2 cut(s)	397, 1986
TseI	GCWGC	2 cut(s)	444, 1337
Tsp45I	GTSAC	2 cut(s)	397, 1986
TspDTI	ATGAA	6 cut(s)	883, 951, 1310, 1911, 1967, 1997
TspGWI	ACGGA	3 cut(s)	184, 244, 324
TspRI	CASTG	5 cut(s)	406, 458, 1135, 1198, 1335
Van91I	CCANNNNNTGG	1 cut(s)	207
VneI	GTGCAC	1 cut(s)	556
VpaK11BI	GGWCC	2 cut(s)	534, 624
XapI	RAATTY	3 cut(s)	344, 1133, 1252
XmiI	GTMKAC	2 cut(s)	68, 982
XmnI	GAANNNNTTC	2 cut(s)	822, 1653
XspI	CTAG	2 cut(s)	1518, 1601
ZraI	GACGTC	1 cut(s)	388
ZrmI	AGTACT	1 cut(s)	1918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.