AT2G28970

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0000083
Physical Location & Seq
Forward (+)
12443721 .. 12448365
4645 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G28970.1

Sequence Viewer

Length: 2361 bp
ATGATGAGCCATCTTTTGTTGGCCATAATTGGAACCTTTGCCGTTATAGTTGGCGCCCAAAAACAAGAAGGTTTCATCAGTTTGGATTGCGGATTTCCTATTGAGGAATCTCCTTATAGTGATCCATCTACTGGATTAACATTCACATCAGATTCAACATTTATCCAGACTGGAGAAAGTGGTAGAGTCGATAAAGAGCTCAACAAAATATTCCGAAAACCATATTTGACTCTAAGATACTTTCCGGAAGGAAAGCGTAATTGCTCACTGAGGAACTCTTTCCGGGTTCATTGCAGCACTTCTGATAGCGAAATAAGGTATGATGATGACTCCTATGATCGTGTCTGGTATCCATTCTTCAGCTCTTCGTTTAGCTATATAACGACTAGTCTCAATATAAACAATTCAGATACATTTGAGATACCAAAAGCTGCACTCAAAAGTGCTGCCACGCCTAAAAACGCTAGTGCACCGCTAATCATAACTTGGAAACCAAGACCCTCTAACGCTGAAGTTTACTTCTATCTTCATTTCGCTGAGATACAAACCCTTGCAGCCAACGAGACGAGGGAATTCGACATTGTTTTCAAAGGAAACTTTAATTATTCAGCTTTTAGTCCTACCAAGTTAGAGCTACTTACATTTTTCACAAGTGGACCAGTGCAATGTGATTCAGATGGTTGCAATTTACAGCTCGTAAGAACTCCGAATTCAACCCTTCCACCTTTGATCAACGCTCTTGAGGCTTACACTATTATCGAATTCCCACAGTTGGAAACAAGCCTAAGTGATGTTAATGCTATCAAAAACATTAAAGCTACGTACCGGCTAAGTAAAACTAGTTGGCAAGGAGATCCATGTCTCCCTCAAGAATTATCCTGGGAAAATCTTAGATGCAGTTACACAAATAGTTCTACCCCACCAAAAATCATTTCATTAAACTTGTCAGCAAGTGGATTAACTGGGAGTCTACCCTCAGTTTTTCAAAATCTAACGCAGATACAAGAGCTGGACTTATCTAACAACAGTTTGACTGGACTTGTGCCTTCTTTTCTGGCCAACATTAAATCATTATCTTTGTTAGACTTGAGTGGGAACAATTTTACCGGTTCAGTTCCACAAACTCTTCTTGATAGAGAAAAGGAAGGACTTGTCTTGAAACTTGAAGGAAATCCAGAGCTATGCAAGTTTAGCTCATGCAATCCAAAAAAGAAAAAGGGATTATTGGTACCGGTTATTGCATCAATTTCCTCTGTGCTTATTGTAATAGTGGTTGTGGCTCTCTTTTTTGTTCTCCGAAAGAAGAAGATGCCTTCAGATGCACAGGCTCCACCAAGTTTGCCCGTAGAAGATGTTGGACAAGCTAAACATTCAGAATCATCATTCGTCTCGAAAAAGATAAGGTTTGCTTATTTCGAGGTTCAAGAGATGACAAATAACTTTCAGAGAGTTCTTGGTGAAGGAGGCTTTGGAGTCGTTTATCATGGTTGTGTTAATGGTACCCAACAAGTAGCTGTTAAATTGCTCTCTCAATCATCTTCCCAAGGCTATAAACATTTCAAGGCAGAGGTGGAACTTCTTATGAGAGTACACCATAAAAATTTGGTGAGTCTTGTTGGTTATTGTGATGAAGGAGACCATTTGGCCCTCATCTACGAGTACATGCCTAATGGAGACTTAAAACAACATTTATCAGGAAAGCGTGGTGGATTTGTCTTAAGCTGGGAAAGTAGACTAAGAGTAGCTGTCGATGCAGCACTAGGTTTGGAGTACTTACACACTGGATGCAAACCACCAATGGTTCACAGAGATATAAAAAGTACAAACATACTTTTGGATGAACGTTTCCAAGCCAAATTAGCCGATTTTGGGCTTTCGAGATCTTTTCCTACCGAAAACGAAACACATGTTTCAACTGTTGTGGCTGGAACTCCTGGTTATCTTGATCCCGAGTATTATCAAACAAATTGGTTGACAGAGAAAAGTGATGTTTACAGTTTCGGAATTGTACTATTGGAGATCATCACAAACCGGCCTATAATTCAGCAATCTCGTGAAAAGCCTCACCTAGTAGAATGGGTTGGATTTATTGTAAGAACGGGAGATATTGGAAATATTGTTGATCCAAACCTTCACGGAGCTTACGACGTCGGTTCTGTCTGGAAGGCTATTGAACTAGCTATGTCATGTGTGAATATTTCTTCGGCAAGAAGACCAAGCATGTCTCAAGTTGTTAGCGATCTTAAAGAGTGTGTGATATCTGAAAATTCAAGGACAGGAGAGAGTCGAGAAATGAACTCAATGAGTTCCATCGAATTCAGCATGGGAATTGACACCGAGGTGATCCCTAAAGCACGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

786

Amino Acids

87.29

Weight (kDa)

6.08

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 28 - 88 2.7e-18 Malectin-like domain
Malectin_like PF12819 89 - 252 5.6e-48 Malectin-like domain
LRR_8 PF13855 312 - 368 5.4e-09 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 481 - 747 5.3e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 482 - 746 3.4e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2151
Acc65I GGTACC 2 cut(s) 1228, 1499
AccB1I GGYRCC 3 cut(s) 53, 1228, 1499
AccB7I CCANNNNNTGG 1 cut(s) 131
AccI GTMKAC 2 cut(s) 970, 1732
AccIII TCCGGA 1 cut(s) 244
AciI CCGC 2 cut(s) 90, 473
AclI AACGTT 1 cut(s) 1843
AclWI GGATC 5 cut(s) 116, 848, 1940, 2117, 2338
AcoI YGGCCR 2 cut(s) 21, 1056
AcsI RAATTY 6 cut(s) 572, 709, 761, 1600, 2266, 2315
AcuI CTGAAG 3 cut(s) 343, 531, 1299
AcyI GRCGYC 2 cut(s) 54, 2148
AfaI GTAC 8 cut(s) 824, 1230, 1501, 1590, 1661, 1772, 1822, 2010
AfiI CCNNNNNNNGG 3 cut(s) 131, 772, 1869
AflII CTTAAG 1 cut(s) 1717
AflIII ACRYGT 1 cut(s) 1906
AgeI ACCGGT 2 cut(s) 1106, 1231
AhlI ACTAGT 2 cut(s) 386, 839
AjnI CCWGG 2 cut(s) 878, 1933
AjuI GAANNNNNNNTTGG 4 cut(s) 916, 948, 1452, 1484
AleI CACNNNNGTG 1 cut(s) 2339
Alw21I GWGCWC 2 cut(s) 201, 472
Alw26I GTCTC 7 cut(s) 395, 557, 866, 1393, 1629, 1668, 2229
Alw44I GTGCAC 1 cut(s) 468
AlwI GGATC 5 cut(s) 116, 848, 1940, 2117, 2338
Ama87I CYCGRG 1 cut(s) 1949
Aor13HI TCCGGA 1 cut(s) 244
AoxI GGCC 4 cut(s) 21, 1056, 1644, 2033
ApaLI GTGCAC 1 cut(s) 468
ApeKI GCWGC 5 cut(s) 294, 431, 446, 554, 1754
ApoI RAATTY 6 cut(s) 572, 709, 761, 1600, 2266, 2315
AsiGI ACCGGT 2 cut(s) 1106, 1231
Asp700I GAANNNNTTC 1 cut(s) 278
Asp718I GGTACC 2 cut(s) 1228, 1499
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 2 cut(s) 656, 1645
AsuC2I CCSGG 1 cut(s) 284
AsuHPI GGTGA 4 cut(s) 1469, 1618, 2057, 2353
AvaI CYCGRG 1 cut(s) 1949
AvaII GGWCC 1 cut(s) 656
BaeGI GKGCMC 1 cut(s) 472
BalI TGGCCA 2 cut(s) 23, 1058
BanI GGYRCC 3 cut(s) 53, 1228, 1499
BanII GRGCYC 1 cut(s) 201
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
BauI CACGAG 1 cut(s) 2052
BbsI GAAGAC 1 cut(s) 2218
Bbv12I GWGCWC 2 cut(s) 201, 472
BbvI GCAGC 5 cut(s) 306, 418, 433, 566, 1766
BccI CCATC 4 cut(s) 18, 133, 671, 2318
BceAI ACGGC 1 cut(s) 26
BciT130I CCWGG 2 cut(s) 880, 1935
BciVI GTATCC 1 cut(s) 360
BclI TGATCA 1 cut(s) 729
BcnI CCSGG 1 cut(s) 284
BcoDI GTCTC 7 cut(s) 395, 557, 866, 1393, 1629, 1668, 2229
BcuI ACTAGT 2 cut(s) 386, 839
BfaI CTAG 7 cut(s) 387, 465, 840, 1760, 2069, 2177, 2359
BfoI RGCGCY 1 cut(s) 57
BfrI CTTAAG 1 cut(s) 1717
BfuI GTATCC 1 cut(s) 360
BglII AGATCT 1 cut(s) 1880
BisI GCNGC 5 cut(s) 295, 432, 447, 555, 1755
BlsI GCNGC 5 cut(s) 296, 433, 448, 556, 1756
BmcAI AGTACT 1 cut(s) 1772
Bme1390I CCNGG 3 cut(s) 284, 880, 1935
Bme18I GGWCC 1 cut(s) 656
BmeT110I CYCGRG 1 cut(s) 1949
BmgT120I GGNCC 2 cut(s) 656, 1645
BmiI GGNNCC 5 cut(s) 34, 55, 1230, 1329, 1501
BmrFI CCNGG 3 cut(s) 284, 880, 1935
BmrI ACTGGG 1 cut(s) 972
BmsI GCATC 6 cut(s) 884, 1250, 1299, 1309, 1741, 1775
BmuI ACTGGG 1 cut(s) 972
BpiI GAAGAC 1 cut(s) 2218
BpmI CTGGAG 1 cut(s) 192
BpuEI CTTGAG 4 cut(s) 761, 852, 1108, 2211
BpuMI CCSGG 1 cut(s) 284
BsaAI YACGTR 1 cut(s) 822
BsaHI GRCGYC 2 cut(s) 54, 2148
BsaI GGTCTC 1 cut(s) 1629
BsaJI CCNNGG 3 cut(s) 879, 1543, 2337
BsaWI WCCGGW 3 cut(s) 244, 1106, 1231
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 772, 1869
Bse118I RCCGGY 4 cut(s) 825, 1106, 1231, 2031
Bse1I ACTGG 6 cut(s) 136, 175, 659, 967, 1039, 1786
Bse3DI GCAATG 2 cut(s) 289, 671
BseAI TCCGGA 1 cut(s) 244
BseBI CCWGG 2 cut(s) 880, 1935
BseDI CCNNGG 3 cut(s) 879, 1543, 2337
BseGI GGATG 2 cut(s) 1790, 1843
BseLI CCNNNNNNNGG 3 cut(s) 131, 772, 1869
BseMI GCAATG 2 cut(s) 289, 671
BseMII CTCAG 3 cut(s) 260, 528, 990
BseNI ACTGG 6 cut(s) 136, 175, 659, 967, 1039, 1786
BseSI GKGCMC 1 cut(s) 472
BseXI GCAGC 5 cut(s) 306, 418, 433, 566, 1766
BseYI CCCAGC 1 cut(s) 1722
BsgI GTGCAG 1 cut(s) 417
BshFI GGCC 4 cut(s) 23, 1058, 1646, 2035
BshNI GGYRCC 3 cut(s) 53, 1228, 1499
BshTI ACCGGT 2 cut(s) 1106, 1231
BsiHKAI GWGCWC 2 cut(s) 201, 472
BsiHKCI CYCGRG 1 cut(s) 1949
BsiSI CCGG 6 cut(s) 245, 283, 826, 1107, 1232, 2032
BslI CCNNNNNNNGG 3 cut(s) 131, 772, 1869
BsmAI GTCTC 7 cut(s) 395, 557, 866, 1393, 1629, 1668, 2229
BsmBI CGTCTC 2 cut(s) 557, 1393
BsnI GGCC 4 cut(s) 23, 1058, 1646, 2035
Bso31I GGTCTC 1 cut(s) 1629
BsoBI CYCGRG 1 cut(s) 1949
Bsp1286I GDGCHC 2 cut(s) 201, 472
Bsp13I TCCGGA 1 cut(s) 244
BspACI CCGC 2 cut(s) 90, 473
BspANI GGCC 4 cut(s) 23, 1058, 1646, 2035
BspCNI CTCAG 3 cut(s) 261, 529, 989
BspEI TCCGGA 1 cut(s) 244
BspLI GGNNCC 5 cut(s) 34, 55, 1230, 1329, 1501
BspPI GGATC 5 cut(s) 116, 848, 1940, 2117, 2338
BspQI GCTCTTC 1 cut(s) 370
BspT107I GGYRCC 3 cut(s) 53, 1228, 1499
BspTI CTTAAG 1 cut(s) 1717
BspTNI GGTCTC 1 cut(s) 1629
BsrDI GCAATG 2 cut(s) 289, 671
BsrFI RCCGGY 4 cut(s) 825, 1106, 1231, 2031
BsrI ACTGG 6 cut(s) 136, 175, 659, 967, 1039, 1786
BssAI RCCGGY 4 cut(s) 825, 1106, 1231, 2031
BssECI CCNNGG 3 cut(s) 879, 1543, 2337
BssNI GRCGYC 2 cut(s) 54, 2148
BssSI CACGAG 1 cut(s) 2052
BssT1I CCWWGG 1 cut(s) 1543
Bst2BI CACGAG 1 cut(s) 2052
Bst2UI CCWGG 2 cut(s) 880, 1935
Bst4CI ACNGT 4 cut(s) 771, 1028, 1918, 1997
Bst6I CTCTTC 2 cut(s) 370, 1131
BstACI GRCGYC 2 cut(s) 54, 2148
BstAFI CTTAAG 1 cut(s) 1717
BstBAI YACGTR 1 cut(s) 822
BstC8I GCNNGC 1 cut(s) 2356
BstDEI CTNAG 8 cut(s) 233, 269, 537, 785, 830, 890, 976, 1736
BstF5I GGATG 2 cut(s) 1790, 1843
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 1 cut(s) 56
BstMAI GTCTC 7 cut(s) 395, 557, 866, 1393, 1629, 1668, 2229
BstMWI GCNNNNNNNGC 4 cut(s) 743, 1191, 1751, 1859
BstNI CCWGG 2 cut(s) 880, 1935
BstNSI RCATGY 3 cut(s) 1666, 1910, 2224
BstSCI CCNGG 3 cut(s) 282, 878, 1933
BstSLI GKGCMC 1 cut(s) 472
BstSNI TACGTA 1 cut(s) 822
BstV1I GCAGC 5 cut(s) 306, 418, 433, 566, 1766
BstV2I GAAGAC 1 cut(s) 2218
BstX2I RGATCY 2 cut(s) 853, 1880
BstYI RGATCY 2 cut(s) 853, 1880
BsuI GTATCC 1 cut(s) 360
BsuRI GGCC 4 cut(s) 23, 1058, 1646, 2035
BtsCI GGATG 2 cut(s) 1790, 1843
BtsIMutI CAGTG 3 cut(s) 266, 666, 1779
Cac8I GCNNGC 1 cut(s) 2356
CfoI GCGC 1 cut(s) 56
Cfr10I RCCGGY 4 cut(s) 825, 1106, 1231, 2031
Cfr13I GGNCC 2 cut(s) 656, 1645
Csp6I GTAC 8 cut(s) 823, 1229, 1500, 1589, 1660, 1771, 1821, 2009
CspAI ACCGGT 2 cut(s) 1106, 1231
CspCI CAANNNNNGTGG 4 cut(s) 1320, 1355, 1902, 1937
CviAII CATG 8 cut(s) 858, 1197, 1484, 1663, 1907, 2187, 2221, 2323
CviQI GTAC 8 cut(s) 823, 1229, 1500, 1589, 1660, 1771, 1821, 2009
DdeI CTNAG 8 cut(s) 233, 269, 537, 785, 830, 890, 976, 1736
DinI GGCGCC 1 cut(s) 55
EaeI YGGCCR 2 cut(s) 21, 1056
Eam1104I CTCTTC 2 cut(s) 370, 1131
EarI CTCTTC 2 cut(s) 370, 1131
Ecl136II GAGCTC 1 cut(s) 199
Eco105I TACGTA 1 cut(s) 822
Eco130I CCWWGG 1 cut(s) 1543
Eco24I GRGCYC 1 cut(s) 201
Eco31I GGTCTC 1 cut(s) 1629
Eco32I GATATC 1 cut(s) 2259
Eco47I GGWCC 1 cut(s) 656
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 3 cut(s) 343, 531, 1299
Eco88I CYCGRG 1 cut(s) 1949
EcoICRI GAGCTC 1 cut(s) 199
EcoRI GAATTC 4 cut(s) 572, 709, 761, 2315
EcoRII CCWGG 2 cut(s) 878, 1933
EcoRV GATATC 1 cut(s) 2259
EcoT14I CCWWGG 1 cut(s) 1543
EcoT38I GRGCYC 1 cut(s) 201
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
ErhI CCWWGG 1 cut(s) 1543
Esp3I CGTCTC 2 cut(s) 557, 1393
FaeI CATG 8 cut(s) 861, 1200, 1487, 1666, 1910, 2190, 2224, 2326
FalI AAGNNNNNCTT 2 cut(s) 1393, 1425
FatI CATG 8 cut(s) 857, 1196, 1483, 1662, 1906, 2186, 2220, 2322
FbaI TGATCA 1 cut(s) 729
FblI GTMKAC 2 cut(s) 970, 1732
Fnu4HI GCNGC 5 cut(s) 295, 432, 447, 555, 1755
FokI GGATG 2 cut(s) 1797, 1850
FriOI GRGCYC 1 cut(s) 201
Fsp4HI GCNGC 5 cut(s) 295, 432, 447, 555, 1755
FspBI CTAG 7 cut(s) 387, 465, 840, 1760, 2069, 2177, 2359
GlaI GCGC 1 cut(s) 55
GluI GCNGC 5 cut(s) 295, 432, 447, 555, 1755
GsaI CCCAGC 1 cut(s) 1726
GsuI CTGGAG 1 cut(s) 192
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 4 cut(s) 23, 1058, 1646, 2035
HapII CCGG 6 cut(s) 245, 283, 826, 1107, 1232, 2032
HhaI GCGC 1 cut(s) 56
Hin1I GRCGYC 2 cut(s) 54, 2148
Hin1II CATG 8 cut(s) 861, 1200, 1487, 1666, 1910, 2190, 2224, 2326
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 1 cut(s) 1974
HindII GTYRAC 1 cut(s) 1974
HpaII CCGG 6 cut(s) 245, 283, 826, 1107, 1232, 2032
HphI GGTGA 4 cut(s) 1469, 1618, 2057, 2353
Hpy166II GTNNAC 9 cut(s) 470, 517, 656, 971, 1591, 1733, 1804, 1974, 1993
Hpy8I GTNNAC 9 cut(s) 470, 517, 656, 971, 1591, 1733, 1804, 1974, 1993
Hpy99I CGWCG 2 cut(s) 2150, 2153
HpyCH4III ACNGT 4 cut(s) 771, 1028, 1918, 1997
HpyCH4IV ACGT 3 cut(s) 821, 1843, 2148
HpyF10VI GCNNNNNNNGC 4 cut(s) 743, 1191, 1751, 1859
HpyF3I CTNAG 8 cut(s) 233, 269, 537, 785, 830, 890, 976, 1736
HpySE526I ACGT 3 cut(s) 821, 1843, 2148
Hsp92I GRCGYC 2 cut(s) 54, 2148
Hsp92II CATG 8 cut(s) 861, 1200, 1487, 1666, 1910, 2190, 2224, 2326
HspAI GCGC 1 cut(s) 54
KasI GGCGCC 1 cut(s) 53
Kpn2I TCCGGA 1 cut(s) 244
KpnI GGTACC 2 cut(s) 1232, 1503
Ksp22I TGATCA 1 cut(s) 729
LguI GCTCTTC 1 cut(s) 370
LmnI GCTCC 2 cut(s) 1333, 2138
Lsp1109I GCAGC 5 cut(s) 306, 418, 433, 566, 1766
LweI GCATC 6 cut(s) 884, 1250, 1299, 1309, 1741, 1775
MaeI CTAG 7 cut(s) 387, 465, 840, 1760, 2069, 2177, 2359
MaeII ACGT 3 cut(s) 821, 1843, 2148
MaeIII GTNAC 1 cut(s) 899
MflI RGATCY 2 cut(s) 853, 1880
MhlI GDGCHC 2 cut(s) 201, 472
MlsI TGGCCA 2 cut(s) 23, 1058
MluNI TGGCCA 2 cut(s) 23, 1058
Mly113I GGCGCC 1 cut(s) 54
MlyI GAGTC 7 cut(s) 195, 223, 323, 976, 1482, 1618, 2293
MmeI TCCRAC 3 cut(s) 753, 1336, 2062
Mox20I TGGCCA 2 cut(s) 23, 1058
MroI TCCGGA 1 cut(s) 244
MroXI GAANNNNTTC 1 cut(s) 278
MscI TGGCCA 2 cut(s) 23, 1058
MslI CAYNNNNRTG 2 cut(s) 1488, 2339
Msp20I TGGCCA 2 cut(s) 23, 1058
MspCI CTTAAG 1 cut(s) 1717
MspI CCGG 6 cut(s) 245, 283, 826, 1107, 1232, 2032
MspR9I CCNGG 3 cut(s) 284, 880, 1935
MvaI CCWGG 2 cut(s) 880, 1935
MwoI GCNNNNNNNGC 4 cut(s) 743, 1191, 1751, 1859
NarI GGCGCC 1 cut(s) 54
NciI CCSGG 1 cut(s) 284
NlaIII CATG 8 cut(s) 861, 1200, 1487, 1666, 1910, 2190, 2224, 2326
NlaIV GGNNCC 5 cut(s) 34, 55, 1230, 1329, 1501
NspI RCATGY 3 cut(s) 1666, 1910, 2224
OliI CACNNNNGTG 1 cut(s) 2339
PciI ACATGT 1 cut(s) 1906
PciSI GCTCTTC 1 cut(s) 370
PcsI WCGNNNNNNNCGW 1 cut(s) 2142
PdmI GAANNNNTTC 1 cut(s) 278
PfeI GAWTC 4 cut(s) 107, 152, 671, 1376
PflMI CCANNNNNTGG 1 cut(s) 131
PinAI ACCGGT 2 cut(s) 1106, 1231
PkrI GCNGC 5 cut(s) 296, 433, 448, 556, 1756
PleI GAGTC 7 cut(s) 194, 223, 323, 975, 1481, 1617, 2292
PluTI GGCGCC 1 cut(s) 57
PpsI GAGTC 7 cut(s) 194, 223, 323, 975, 1481, 1617, 2292
Ppu21I YACGTR 1 cut(s) 822
PscI ACATGT 1 cut(s) 1906
Psp124BI GAGCTC 1 cut(s) 201
Psp1406I AACGTT 1 cut(s) 1843
Psp6I CCWGG 2 cut(s) 878, 1933
PspFI CCCAGC 1 cut(s) 1722
PspGI CCWGG 2 cut(s) 878, 1933
PspN4I GGNNCC 5 cut(s) 34, 55, 1230, 1329, 1501
PspPI GGNCC 2 cut(s) 656, 1645
PsuI RGATCY 2 cut(s) 853, 1880
RsaI GTAC 8 cut(s) 824, 1230, 1501, 1590, 1661, 1772, 1822, 2010
RsaNI GTAC 8 cut(s) 823, 1229, 1500, 1589, 1660, 1771, 1821, 2009
RseI CAYNNNNRTG 2 cut(s) 1488, 2339
SacI GAGCTC 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 370
SatI GCNGC 5 cut(s) 295, 432, 447, 555, 1755
Sau96I GGNCC 2 cut(s) 656, 1645
ScaI AGTACT 1 cut(s) 1772
SchI GAGTC 7 cut(s) 195, 223, 323, 976, 1482, 1618, 2293
ScrFI CCNGG 3 cut(s) 284, 880, 1935
SduI GDGCHC 2 cut(s) 201, 472
SfaNI GCATC 6 cut(s) 884, 1250, 1299, 1309, 1741, 1775
SfoI GGCGCC 1 cut(s) 55
SinI GGWCC 1 cut(s) 656
SmiMI CAYNNNNRTG 2 cut(s) 1488, 2339
SmlI CTYRAG 5 cut(s) 740, 867, 1087, 1717, 2226
SmoI CTYRAG 5 cut(s) 740, 867, 1087, 1717, 2226
SnaBI TACGTA 1 cut(s) 822
SpeI ACTAGT 2 cut(s) 386, 839
SsiI CCGC 2 cut(s) 90, 473
SspDI GGCGCC 1 cut(s) 53
SspI AATATT 3 cut(s) 210, 2116, 2197
SspMI CTAG 7 cut(s) 387, 465, 840, 1760, 2069, 2177, 2359
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 3 cut(s) 282, 878, 1933
StyI CCWWGG 1 cut(s) 1543
TaaI ACNGT 4 cut(s) 771, 1028, 1918, 1997
TaiI ACGT 3 cut(s) 824, 1846, 2151
TaqI TCGA 9 cut(s) 189, 576, 759, 1391, 1416, 1749, 1877, 2287, 2313
TatI WGTACW 5 cut(s) 1588, 1659, 1770, 1820, 2008
TfiI GAWTC 4 cut(s) 107, 152, 671, 1376
TscAI CASTG 3 cut(s) 273, 666, 1786
TseI GCWGC 5 cut(s) 294, 431, 446, 554, 1754
TspDTI ATGAA 7 cut(s) 64, 278, 518, 924, 1644, 1854, 2309
TspGWI ACGGA 1 cut(s) 2151
TspRI CASTG 3 cut(s) 273, 666, 1786
Van91I CCANNNNNTGG 1 cut(s) 131
Vha464I CTTAAG 1 cut(s) 1717
VneI GTGCAC 1 cut(s) 468
VpaK11BI GGWCC 1 cut(s) 656
XapI RAATTY 6 cut(s) 572, 709, 761, 1600, 2266, 2315
XceI RCATGY 3 cut(s) 1666, 1910, 2224
XmiI GTMKAC 2 cut(s) 970, 1732
XmnI GAANNNNTTC 1 cut(s) 278
XspI CTAG 7 cut(s) 387, 465, 840, 1760, 2069, 2177, 2359
ZraI GACGTC 1 cut(s) 2149
ZrmI AGTACT 1 cut(s) 1772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.