Rmu_sc0001554.1_g000005

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001554.1
Physical Location & Seq
Reverse (-)
19961 .. 20686
726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001554.1_g000005.1.cds

Sequence Viewer

Length: 630 bp
atgctgggaaaactcaggttgttcagccatttcttttatgcattgtttggtttcattttaccagtacttatagttcatggccaagatcaagcaggcttcattagcatagactgtggcctagcagctaattctagctataatgaaccaaaaacaggcgtattttacgtgtcagacacaactttcctggacaacatcacaggtgaaagtaagctcttattgccagaacacagagatgactacctacggcaggtctggaatctcagatactttcccgaaggtatccgcaactgttacaccataaacataattagtagcaccaaatatttgatcagagcaacattcttttacggggattatgacggccaatacaaggcaccggtgttcgatttgcatcttggagcaaactactgggatacagtgaagtcaaacaacacaatcaaggagatcatacatgtccccttgcaaaactacattcacatttgtctggtcaacacaggctttgggactccctatatatcagctatagaactaaggcccttgggtactacagtttacaagactcaaatgggctccttggcactcttcaatcgtttggacactggttcaataacgaataaaacatacatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

209

Amino Acids

23.84

Weight (kDa)

7.0

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 238
AccB1I GGYRCC 1 cut(s) 373
AciI CCGC 1 cut(s) 283
AcoI YGGCCR 2 cut(s) 79, 361
AfaI GTAC 2 cut(s) 66, 544
AfiI CCNNNNNNNGG 3 cut(s) 152, 247, 370
AflIII ACRYGT 3 cut(s) 165, 451, 624
AgeI ACCGGT 1 cut(s) 376
AgsI TTSAA 2 cut(s) 586, 606
AjnI CCWGG 1 cut(s) 183
AluBI AGCT 4 cut(s) 125, 135, 211, 521
AluI AGCT 4 cut(s) 125, 135, 211, 521
AoxI GGCC 4 cut(s) 79, 115, 361, 533
ApeKI GCWGC 1 cut(s) 122
AsiGI ACCGGT 1 cut(s) 376
AspS9I GGNCC 1 cut(s) 534
AsuHPI GGTGA 1 cut(s) 212
BaeI ACNNNNGTAYC 2 cut(s) 534, 567
BalI TGGCCA 1 cut(s) 81
BanI GGYRCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 572
BbvI GCAGC 1 cut(s) 134
BceAI ACGGC 2 cut(s) 260, 376
BciT130I CCWGG 1 cut(s) 185
BciVI GTATCC 2 cut(s) 290, 406
BclI TGATCA 1 cut(s) 327
BfaI CTAG 2 cut(s) 119, 132
BfmI CTRYAG 2 cut(s) 522, 546
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 2 cut(s) 290, 406
BisI GCNGC 1 cut(s) 123
BlsI GCNGC 1 cut(s) 124
BmcAI AGTACT 1 cut(s) 66
Bme1390I CCNGG 1 cut(s) 185
BmgT120I GGNCC 1 cut(s) 534
BmiI GGNNCC 2 cut(s) 375, 571
BmrFI CCNGG 1 cut(s) 185
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 1 cut(s) 400
BmuI ACTGGG 1 cut(s) 418
BsaAI YACGTR 1 cut(s) 166
BsaBI GATNNNNATC 1 cut(s) 390
BsaJI CCNNGG 2 cut(s) 537, 573
BsaWI WCCGGW 1 cut(s) 376
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 247, 370
Bse118I RCCGGY 1 cut(s) 376
Bse1I ACTGG 3 cut(s) 62, 413, 604
Bse8I GATNNNNATC 1 cut(s) 390
BseBI CCWGG 1 cut(s) 185
BseDI CCNNGG 2 cut(s) 537, 573
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 3 cut(s) 152, 247, 370
BseMII CTCAG 2 cut(s) 28, 274
BseNI ACTGG 3 cut(s) 62, 413, 604
BseXI GCAGC 1 cut(s) 134
BseYI CCCAGC 1 cut(s) 4
BshFI GGCC 4 cut(s) 81, 117, 363, 535
BshNI GGYRCC 1 cut(s) 373
BshTI ACCGGT 1 cut(s) 376
BsiSI CCGG 1 cut(s) 377
BslFI GGGAC 2 cut(s) 440, 517
BslI CCNNNNNNNGG 3 cut(s) 152, 247, 370
BsmFI GGGAC 2 cut(s) 440, 517
BsnI GGCC 4 cut(s) 81, 117, 363, 535
Bsp1286I GDGCHC 1 cut(s) 572
Bsp143I GATC 3 cut(s) 85, 327, 444
BspACI CCGC 1 cut(s) 283
BspANI GGCC 4 cut(s) 81, 117, 363, 535
BspCNI CTCAG 2 cut(s) 27, 273
BspLI GGNNCC 2 cut(s) 375, 571
BspMI ACCTGC 1 cut(s) 238
BspT107I GGYRCC 1 cut(s) 373
BsrFI RCCGGY 1 cut(s) 376
BsrI ACTGG 3 cut(s) 62, 413, 604
BssAI RCCGGY 1 cut(s) 376
BssECI CCNNGG 2 cut(s) 537, 573
BssMI GATC 3 cut(s) 85, 327, 444
BssT1I CCWWGG 2 cut(s) 537, 573
Bst2UI CCWGG 1 cut(s) 185
Bst4CI ACNGT 4 cut(s) 113, 290, 418, 550
Bst6I CTCTTC 1 cut(s) 587
BstBAI YACGTR 1 cut(s) 166
BstC8I GCNNGC 1 cut(s) 94
BstDEI CTNAG 3 cut(s) 14, 260, 530
BstENI CCTNNNNNAGG 1 cut(s) 245
BstKTI GATC 3 cut(s) 88, 330, 447
BstMBI GATC 3 cut(s) 85, 327, 444
BstMWI GCNNNNNNNGC 2 cut(s) 102, 217
BstNI CCWGG 1 cut(s) 185
BstNSI RCATGY 2 cut(s) 455, 628
BstSCI CCNGG 1 cut(s) 183
BstSFI CTRYAG 2 cut(s) 522, 546
BstV1I GCAGC 1 cut(s) 134
BsuI GTATCC 2 cut(s) 290, 406
BsuRI GGCC 4 cut(s) 81, 117, 363, 535
BtsIMutI CAGTG 2 cut(s) 423, 597
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 1 cut(s) 94
Cfr10I RCCGGY 1 cut(s) 376
Cfr13I GGNCC 1 cut(s) 534
Csp6I GTAC 2 cut(s) 65, 543
CspAI ACCGGT 1 cut(s) 376
CviAII CATG 3 cut(s) 77, 452, 625
CviQI GTAC 2 cut(s) 65, 543
DdeI CTNAG 3 cut(s) 14, 260, 530
DpnI GATC 3 cut(s) 87, 329, 446
DpnII GATC 3 cut(s) 85, 327, 444
EaeI YGGCCR 2 cut(s) 79, 361
Eam1104I CTCTTC 1 cut(s) 587
EarI CTCTTC 1 cut(s) 587
Eco130I CCWWGG 2 cut(s) 537, 573
Eco24I GRGCYC 1 cut(s) 572
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoO109I RGGNCCY 1 cut(s) 534
EcoRII CCWGG 1 cut(s) 183
EcoT14I CCWWGG 2 cut(s) 537, 573
EcoT22I ATGCAT 1 cut(s) 43
EcoT38I GRGCYC 1 cut(s) 572
ErhI CCWWGG 2 cut(s) 537, 573
FaeI CATG 3 cut(s) 80, 455, 628
FaqI GGGAC 2 cut(s) 440, 517
FatI CATG 3 cut(s) 76, 451, 624
FbaI TGATCA 1 cut(s) 327
Fnu4HI GCNGC 1 cut(s) 123
FriOI GRGCYC 1 cut(s) 572
Fsp4HI GCNGC 1 cut(s) 123
FspBI CTAG 2 cut(s) 119, 132
GluI GCNGC 1 cut(s) 123
GsaI CCCAGC 1 cut(s) 8
HaeIII GGCC 4 cut(s) 81, 117, 363, 535
HapII CCGG 1 cut(s) 377
Hin1II CATG 3 cut(s) 80, 455, 628
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HinfI GANTC 3 cut(s) 256, 505, 559
HpaII CCGG 1 cut(s) 377
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 2 cut(s) 490, 553
Hpy188I TCNGA 3 cut(s) 172, 263, 332
Hpy188III TCNNGA 2 cut(s) 253, 272
Hpy8I GTNNAC 2 cut(s) 490, 553
HpyAV CCTTC 1 cut(s) 269
HpyCH4III ACNGT 4 cut(s) 113, 290, 418, 550
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 3 cut(s) 41, 391, 463
HpyF10VI GCNNNNNNNGC 2 cut(s) 102, 217
HpyF3I CTNAG 3 cut(s) 14, 260, 530
HpySE526I ACGT 1 cut(s) 165
Hsp92II CATG 3 cut(s) 80, 455, 628
Ksp22I TGATCA 1 cut(s) 327
Kzo9I GATC 3 cut(s) 85, 327, 444
LmnI GCTCC 2 cut(s) 398, 575
Lsp1109I GCAGC 1 cut(s) 134
LweI GCATC 1 cut(s) 400
MaeI CTAG 2 cut(s) 119, 132
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 1 cut(s) 290
MalI GATC 3 cut(s) 87, 329, 446
MboI GATC 3 cut(s) 85, 327, 444
MboII GAAGA 1 cut(s) 574
MhlI GDGCHC 1 cut(s) 572
MlsI TGGCCA 1 cut(s) 81
MluCI AATT 2 cut(s) 127, 306
MluNI TGGCCA 1 cut(s) 81
MlyI GAGTC 2 cut(s) 499, 553
Mox20I TGGCCA 1 cut(s) 81
Mph1103I ATGCAT 1 cut(s) 43
MscI TGGCCA 1 cut(s) 81
MslI CAYNNNNRTG 1 cut(s) 231
Msp20I TGGCCA 1 cut(s) 81
MspI CCGG 1 cut(s) 377
MspR9I CCNGG 1 cut(s) 185
MvaI CCWGG 1 cut(s) 185
MwoI GCNNNNNNNGC 2 cut(s) 102, 217
NdeII GATC 3 cut(s) 85, 327, 444
NlaIII CATG 3 cut(s) 80, 455, 628
NlaIV GGNNCC 2 cut(s) 375, 571
NsiI ATGCAT 1 cut(s) 43
NspI RCATGY 2 cut(s) 455, 628
PciI ACATGT 2 cut(s) 451, 624
PfeI GAWTC 1 cut(s) 256
PfoI TCCNGGA 1 cut(s) 183
PinAI ACCGGT 1 cut(s) 376
PkrI GCNGC 1 cut(s) 124
PleI GAGTC 2 cut(s) 499, 553
PpsI GAGTC 2 cut(s) 499, 553
Ppu21I YACGTR 1 cut(s) 166
PscI ACATGT 2 cut(s) 451, 624
Psp6I CCWGG 1 cut(s) 183
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 1 cut(s) 183
PspN4I GGNNCC 2 cut(s) 375, 571
PspPI GGNCC 1 cut(s) 534
PsrI GAACNNNNNNTAC 2 cut(s) 57, 89
RsaI GTAC 2 cut(s) 66, 544
RsaNI GTAC 2 cut(s) 65, 543
RseI CAYNNNNRTG 1 cut(s) 231
SatI GCNGC 1 cut(s) 123
Sau3AI GATC 3 cut(s) 85, 327, 444
Sau96I GGNCC 1 cut(s) 534
ScaI AGTACT 1 cut(s) 66
SchI GAGTC 2 cut(s) 499, 553
ScrFI CCNGG 1 cut(s) 185
SduI GDGCHC 1 cut(s) 572
SfaNI GCATC 1 cut(s) 400
SfcI CTRYAG 2 cut(s) 522, 546
SgrAI CRCCGGYG 1 cut(s) 376
SmiMI CAYNNNNRTG 1 cut(s) 231
Sse9I AATT 2 cut(s) 127, 306
SsiI CCGC 1 cut(s) 283
SspI AATATT 1 cut(s) 323
SspMI CTAG 2 cut(s) 119, 132
StyD4I CCNGG 1 cut(s) 183
StyI CCWWGG 2 cut(s) 537, 573
TaaI ACNGT 4 cut(s) 113, 290, 418, 550
TaiI ACGT 1 cut(s) 168
TaqI TCGA 1 cut(s) 384
TasI AATT 2 cut(s) 127, 306
TatI WGTACW 1 cut(s) 64
TfiI GAWTC 1 cut(s) 256
TscAI CASTG 2 cut(s) 423, 604
TseI GCWGC 1 cut(s) 122
TspDTI ATGAA 4 cut(s) 43, 65, 88, 156
TspRI CASTG 2 cut(s) 423, 604
XagI CCTNNNNNAGG 1 cut(s) 245
XceI RCATGY 2 cut(s) 455, 628
XspI CTAG 2 cut(s) 119, 132
ZrmI AGTACT 1 cut(s) 66
Zsp2I ATGCAT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.