Rh2AG418900

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000083
Physical Location & Seq
Reverse (-)
62217662 .. 62225878
8217 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG418900.1

Sequence Viewer

Length: 1893 bp
ATGAACCATCTTGATGTCAGTTTGTGTGACAACCCAAATCTAGCTGGAAATGAATCTTGCACAACAAAGAAGAAGAAGAATAAAAGCATTATTCCAATAATTGGAGCTATTGCCGGAATTTCAACCCTCATTATAGCTGGAGCAGTTTTCTTTTGTTTCTGTAAAAGGAAAAGACAACATGTAGCTGCAATCAATTCAAAACCCAACCCTGGATCAGTGGAACTCGAGCAAAAAAACCGAAAGTTTACATACTCTGAGATCCTCAAGATCACAAACAACCGACAAAGGGTTCTTGGCAAAGGTGGATTTGGAACTGTTTATCATGGCTACGTAGATGACAAAACTCAAGTAGCTGTCAAGCTGCTTTCACCGTCATCAAGTCAAGGACTTCAACAATTTCATGCAGAGGTTCATCTTCTTATGAGAGTTCATCATACAAACTTGACTAGCCTCGTTGGATATTGTGATGACGAAACCAACAAAGGGCTTGTTTACGAGTACATGGCCAATGGAAACTTGCAAGCATTTCTCTCAGTGAAAAGCCGGATGTGTTATTTCAACCCTCCAGGGACGTTCAGGCAATTCCTCTTTCCACTGATTGCTGGGTTTGCTCTTATGCTCGTAGTTCATGCTCAAGATCAAACAGGCTTCATTAGCATCGACTGTGGGATTCAGGAGAACTCCAGCTATTCTGAGAAGACAACAGAAATTAACTACATTTCAGATGCTACCTTCATAGACACTGGTGAAAGAGAATTGGTATTGCCTGCTAACAGAAACAACTACCAACAGCCGTACTGGTCTCTTAGGAGCTTCCCTCAAGGAACCAGGAACTGCTACAAAATAATTGTTGAAACTGCCACCAGATATCTTATCAGAGCCAGCTTCTTTTATGGGAATTATGATGGAGAAAACAAATTGCCACAATTTGAACTACATCTTGGACCTAATTTGTGGGACTCGGTGAGTTTGACCGATGCCTCTAATCCCACAACCAAGGAGCTCATACACAATGTCCCAGCTAACACAACATATATACATGTTTGTCTGGTGAACACAGGCTCTGGGGTTCCATTTATATCAATAATTGAACTCAGGCCTTTGCCCAGTACAACATATCAGACAGAAATGGGGTCTTTAGGACTTTATGTGCGGCTTGACACTGGTCAATCACCATCTAATTATACAGGATATAGGTTTCCAGTTGATATTCATGATCGATTTTGGTATAACTATGCCCAAAGTGATTGGACACAAATAAGTACCTTATCCACCACCTTCAACTCTGCACCTGATAATGATTACAACCCACCATCTATTGTAATGCGTACAGCTGCCACTCCGAAACTTGAAAGTGATAACTTGAGTTTCTACTGGCTGCCTACTGATCCAAGTGCAGAATTTTATGTATACATGCACTTTTCAGAAGTTGTAGAGCTCCAAGCCAACCAGTCTAGACAGCTTGATATTACTTGGAATGGAGAGCACTACTATGGGCCATTTGTTCCTAATTTCTTCAACACCACAACGGTTTCCAGTACTAAACCTTTGACTGGAGGAAAATATAATTTTTCAATCTCAAACCCAGATGGGAACTCTGTCCTTCAACCCATCCTCAATGGAATCGAGATCTACCAGCTAAAAGAATTCTTACAAATAGAAACGAAACAAGAAGATGTTGACGCAATCACAAACATTAAGTCAACCTATACCATTGAGAAGAATTGGCAAGGAGATCCATGTTCCCCCAAGAACTACTTATGGGAAGGTCTAAAATGTAGCTATCCTATAAATGAGTCCCCAAGAATCATATCATTGGACTTGTCCTCGAGTGAATTAACTGGGGAGACAGCTCTTTCTTTATCCAATCTATCAATGATACAGTCTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

630

Amino Acids

70.89

Weight (kDa)

5.9

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 94 - 180 6.9e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 95 - 181 5.7e-17 Protein tyrosine and serine/threonine kinase
Malectin_like PF12819 220 - 546 1e-108 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 101
AccI GTMKAC 1 cut(s) 1410
AciI CCGC 1 cut(s) 1153
AclWI GGATC 4 cut(s) 220, 253, 1382, 1730
AcoI YGGCCR 1 cut(s) 504
AcsI RAATTY 3 cut(s) 117, 1400, 1646
AfaI GTAC 6 cut(s) 500, 797, 1111, 1264, 1330, 1540
AfiI CCNNNNNNNGG 5 cut(s) 101, 209, 286, 483, 1553
AflIII ACRYGT 2 cut(s) 178, 1039
AjnI CCWGG 3 cut(s) 208, 565, 827
AjuI GAANNNNNNNTTGG 2 cut(s) 924, 956
Alw21I GWGCWC 3 cut(s) 1005, 1440, 1488
Alw26I GTCTC 2 cut(s) 807, 1841
AlwI GGATC 4 cut(s) 220, 253, 1382, 1730
AlwNI CAGNNNCTG 2 cut(s) 834, 1064
Ama87I CYCGRG 2 cut(s) 224, 1828
AoxI GGCC 3 cut(s) 504, 1097, 1496
ApeKI GCWGC 4 cut(s) 185, 361, 1334, 1378
ApoI RAATTY 3 cut(s) 117, 1400, 1646
ArsI GACNNNNNNTTYG 2 cut(s) 1685, 1717
AspS9I GGNCC 2 cut(s) 944, 1496
AsuHPI GGTGA 5 cut(s) 360, 758, 976, 1063, 1164
AvaI CYCGRG 2 cut(s) 224, 1828
AvaII GGWCC 1 cut(s) 944
BalI TGGCCA 1 cut(s) 506
BanII GRGCYC 2 cut(s) 1005, 1440
BbsI GAAGAC 1 cut(s) 704
Bbv12I GWGCWC 3 cut(s) 1005, 1440, 1488
BbvI GCAGC 4 cut(s) 172, 348, 1321, 1365
BccI CCATC 6 cut(s) 15, 899, 1183, 1321, 1583, 1619
BceAI ACGGC 1 cut(s) 778
BciT130I CCWGG 3 cut(s) 210, 567, 829
BcoDI GTCTC 2 cut(s) 807, 1841
BfaI CTAG 3 cut(s) 41, 447, 1455
BglII AGATCT 1 cut(s) 1629
BisI GCNGC 5 cut(s) 186, 362, 1154, 1335, 1379
BlsI GCNGC 5 cut(s) 187, 363, 1155, 1336, 1380
BmcAI AGTACT 1 cut(s) 1540
Bme1390I CCNGG 3 cut(s) 210, 567, 829
Bme18I GGWCC 1 cut(s) 944
BmeT110I CYCGRG 2 cut(s) 224, 1828
BmgT120I GGNCC 2 cut(s) 944, 1496
BmiI GGNNCC 2 cut(s) 826, 1071
BmrFI CCNGG 3 cut(s) 210, 567, 829
BmrI ACTGGG 2 cut(s) 1101, 1851
BmsI GCATC 3 cut(s) 666, 715, 967
BmuI ACTGGG 2 cut(s) 1101, 1851
BoxI GACNNNNGTC 1 cut(s) 1164
BpiI GAAGAC 1 cut(s) 704
BplI GAGNNNNNCTC 2 cut(s) 802, 834
BpmI CTGGAG 4 cut(s) 159, 549, 667, 1575
BpuEI CTTGAG 5 cut(s) 248, 330, 618, 804, 1384
Bsa29I ATCGAT 1 cut(s) 1219
BsaAI YACGTR 1 cut(s) 331
BsaI GGTCTC 1 cut(s) 807
BsaJI CCNNGG 3 cut(s) 208, 566, 996
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 209, 286, 483, 1553
BseBI CCWGG 3 cut(s) 210, 567, 829
BseCI ATCGAT 1 cut(s) 1219
BseDI CCNNGG 3 cut(s) 208, 566, 996
BseGI GGATG 2 cut(s) 552, 1611
BseLI CCNNNNNNNGG 5 cut(s) 101, 209, 286, 483, 1553
BseMII CTCAG 4 cut(s) 246, 546, 684, 1108
BseXI GCAGC 4 cut(s) 172, 348, 1321, 1365
BseYI CCCAGC 2 cut(s) 602, 1018
BsgI GTGCAG 2 cut(s) 1272, 1416
BshFI GGCC 3 cut(s) 506, 1099, 1498
BshVI ATCGAT 1 cut(s) 1219
BsiHKAI GWGCWC 3 cut(s) 1005, 1440, 1488
BsiHKCI CYCGRG 2 cut(s) 224, 1828
BsiSI CCGG 2 cut(s) 114, 544
BslFI GGGAC 4 cut(s) 583, 971, 1001, 1783
BslI CCNNNNNNNGG 5 cut(s) 101, 209, 286, 483, 1553
BsmAI GTCTC 2 cut(s) 807, 1841
BsmFI GGGAC 4 cut(s) 583, 971, 1001, 1783
BsnI GGCC 3 cut(s) 506, 1099, 1498
Bso31I GGTCTC 1 cut(s) 807
BsoBI CYCGRG 2 cut(s) 224, 1828
Bsp1286I GDGCHC 3 cut(s) 1005, 1440, 1488
Bsp143I GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
BspACI CCGC 1 cut(s) 1153
BspANI GGCC 3 cut(s) 506, 1099, 1498
BspCNI CTCAG 4 cut(s) 247, 545, 685, 1107
BspDI ATCGAT 1 cut(s) 1219
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 2 cut(s) 826, 1071
BspPI GGATC 4 cut(s) 220, 253, 1382, 1730
BspTNI GGTCTC 1 cut(s) 807
BssECI CCNNGG 3 cut(s) 208, 566, 996
BssMI GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
BssNAI GTATAC 1 cut(s) 1411
BssT1I CCWWGG 1 cut(s) 996
Bst1107I GTATAC 1 cut(s) 1411
Bst2UI CCWGG 3 cut(s) 210, 567, 829
Bst4CI ACNGT 5 cut(s) 316, 372, 665, 1531, 1884
BstBAI YACGTR 1 cut(s) 331
BstC8I GCNNGC 3 cut(s) 522, 768, 883
BstDEI CTNAG 5 cut(s) 255, 532, 693, 806, 1094
BstF5I GGATG 2 cut(s) 552, 1611
BstKTI GATC 8 cut(s) 215, 261, 270, 640, 1219, 1390, 1632, 1738
BstMAI GTCTC 2 cut(s) 807, 1841
BstMBI GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
BstMWI GCNNNNNNNGC 2 cut(s) 608, 654
BstNI CCWGG 3 cut(s) 210, 567, 829
BstNSI RCATGY 3 cut(s) 182, 1043, 1417
BstPAI GACNNNNGTC 1 cut(s) 1164
BstSCI CCNGG 3 cut(s) 208, 565, 827
BstSNI TACGTA 1 cut(s) 331
BstV1I GCAGC 4 cut(s) 172, 348, 1321, 1365
BstV2I GAAGAC 1 cut(s) 704
BstX2I RGATCY 3 cut(s) 258, 1629, 1735
BstYI RGATCY 3 cut(s) 258, 1629, 1735
BstZ17I GTATAC 1 cut(s) 1411
Bsu15I ATCGAT 1 cut(s) 1219
BsuRI GGCC 3 cut(s) 506, 1099, 1498
BsuTUI ATCGAT 1 cut(s) 1219
BtsCI GGATG 2 cut(s) 552, 1611
BtsIMutI CAGTG 5 cut(s) 222, 540, 593, 741, 1161
Cac8I GCNNGC 3 cut(s) 522, 768, 883
CaiI CAGNNNCTG 2 cut(s) 834, 1064
CciI TCATGA 1 cut(s) 1213
Cfr13I GGNCC 2 cut(s) 944, 1496
ClaI ATCGAT 1 cut(s) 1219
CseI GACGC 1 cut(s) 1691
Csp6I GTAC 6 cut(s) 499, 796, 1110, 1263, 1329, 1539
CviAII CATG 9 cut(s) 179, 323, 401, 502, 629, 1040, 1214, 1414, 1740
CviQI GTAC 6 cut(s) 499, 796, 1110, 1263, 1329, 1539
DdeI CTNAG 5 cut(s) 255, 532, 693, 806, 1094
DpnI GATC 8 cut(s) 214, 260, 269, 639, 1218, 1389, 1631, 1737
DpnII GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
EaeI YGGCCR 1 cut(s) 504
Ecl136II GAGCTC 2 cut(s) 1003, 1438
Eco105I TACGTA 1 cut(s) 331
Eco130I CCWWGG 1 cut(s) 996
Eco147I AGGCCT 1 cut(s) 1099
Eco24I GRGCYC 2 cut(s) 1005, 1440
Eco31I GGTCTC 1 cut(s) 807
Eco32I GATATC 1 cut(s) 869
Eco47I GGWCC 1 cut(s) 944
Eco53kI GAGCTC 2 cut(s) 1003, 1438
Eco88I CYCGRG 2 cut(s) 224, 1828
EcoICRI GAGCTC 2 cut(s) 1003, 1438
EcoRI GAATTC 1 cut(s) 1646
EcoRII CCWGG 3 cut(s) 208, 565, 827
EcoRV GATATC 1 cut(s) 869
EcoT14I CCWWGG 1 cut(s) 996
EcoT38I GRGCYC 2 cut(s) 1005, 1440
ErhI CCWWGG 1 cut(s) 996
FaeI CATG 9 cut(s) 182, 326, 404, 505, 632, 1043, 1217, 1417, 1743
FalI AAGNNNNNCTT 2 cut(s) 1742, 1774
FaqI GGGAC 4 cut(s) 583, 971, 1001, 1783
FatI CATG 9 cut(s) 178, 322, 400, 501, 628, 1039, 1213, 1413, 1739
FblI GTMKAC 1 cut(s) 1410
Fnu4HI GCNGC 5 cut(s) 186, 362, 1154, 1335, 1379
FokI GGATG 2 cut(s) 559, 1598
FriOI GRGCYC 2 cut(s) 1005, 1440
Fsp4HI GCNGC 5 cut(s) 186, 362, 1154, 1335, 1379
FspBI CTAG 3 cut(s) 41, 447, 1455
GluI GCNGC 5 cut(s) 186, 362, 1154, 1335, 1379
GsaI CCCAGC 2 cut(s) 606, 1022
GsuI CTGGAG 4 cut(s) 159, 549, 667, 1575
HaeIII GGCC 3 cut(s) 506, 1099, 1498
HapII CCGG 2 cut(s) 114, 544
HgaI GACGC 1 cut(s) 1691
Hin1II CATG 9 cut(s) 182, 326, 404, 505, 632, 1043, 1217, 1417, 1743
HincII GTYRAC 2 cut(s) 1681, 1704
HindII GTYRAC 2 cut(s) 1681, 1704
HinfI GANTC 6 cut(s) 53, 670, 959, 1623, 1796, 1806
HpaII CCGG 2 cut(s) 114, 544
HphI GGTGA 5 cut(s) 360, 758, 976, 1063, 1164
Hpy166II GTNNAC 6 cut(s) 246, 493, 1054, 1411, 1681, 1704
Hpy188I TCNGA 7 cut(s) 256, 694, 724, 878, 1122, 1344, 1426
Hpy188III TCNNGA 7 cut(s) 11, 265, 635, 674, 1214, 1455, 1627
Hpy8I GTNNAC 6 cut(s) 246, 493, 1054, 1411, 1681, 1704
HpyAV CCTTC 4 cut(s) 742, 1288, 1613, 1760
HpyCH4III ACNGT 5 cut(s) 316, 372, 665, 1531, 1884
HpyCH4IV ACGT 2 cut(s) 330, 572
HpyCH4V TGCA 7 cut(s) 60, 188, 404, 520, 1289, 1397, 1417
HpyF10VI GCNNNNNNNGC 2 cut(s) 608, 654
HpyF3I CTNAG 5 cut(s) 255, 532, 693, 806, 1094
HpySE526I ACGT 2 cut(s) 330, 572
Hsp92II CATG 9 cut(s) 182, 326, 404, 505, 632, 1043, 1217, 1417, 1743
Kzo9I GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
LmnI GCTCC 5 cut(s) 104, 140, 810, 1000, 1443
Lsp1109I GCAGC 4 cut(s) 172, 348, 1321, 1365
LweI GCATC 3 cut(s) 666, 715, 967
MaeI CTAG 3 cut(s) 41, 447, 1455
MaeII ACGT 2 cut(s) 330, 572
MaeIII GTNAC 1 cut(s) 26
MalI GATC 8 cut(s) 214, 260, 269, 639, 1218, 1389, 1631, 1737
MboI GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
MboII GAAGA 8 cut(s) 82, 85, 88, 407, 709, 1507, 1685, 1732
MflI RGATCY 3 cut(s) 258, 1629, 1735
MhlI GDGCHC 3 cut(s) 1005, 1440, 1488
MlsI TGGCCA 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 506
MlyI GAGTC 2 cut(s) 953, 1805
MmeI TCCRAC 1 cut(s) 436
Mox20I TGGCCA 1 cut(s) 506
MscI TGGCCA 1 cut(s) 506
MseI TTAA 3 cut(s) 711, 1698, 1838
MslI CAYNNNNRTG 2 cut(s) 12, 1491
Msp20I TGGCCA 1 cut(s) 506
MspA1I CMGCKG 1 cut(s) 1334
MspI CCGG 2 cut(s) 114, 544
MspR9I CCNGG 3 cut(s) 210, 567, 829
MvaI CCWGG 3 cut(s) 210, 567, 829
MwoI GCNNNNNNNGC 2 cut(s) 608, 654
NdeII GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
NlaIII CATG 9 cut(s) 182, 326, 404, 505, 632, 1043, 1217, 1417, 1743
NlaIV GGNNCC 2 cut(s) 826, 1071
NmuCI GTSAC 1 cut(s) 26
NspI RCATGY 3 cut(s) 182, 1043, 1417
PaeR7I CTCGAG 2 cut(s) 224, 1828
PagI TCATGA 1 cut(s) 1213
PceI AGGCCT 1 cut(s) 1099
PciI ACATGT 2 cut(s) 178, 1039
PfeI GAWTC 4 cut(s) 53, 670, 1623, 1806
PflMI CCANNNNNTGG 1 cut(s) 101
PkrI GCNGC 5 cut(s) 187, 363, 1155, 1336, 1380
PleI GAGTC 2 cut(s) 953, 1804
PpsI GAGTC 2 cut(s) 953, 1804
Ppu21I YACGTR 1 cut(s) 331
PscI ACATGT 2 cut(s) 178, 1039
PshAI GACNNNNGTC 1 cut(s) 1164
Psp124BI GAGCTC 2 cut(s) 1005, 1440
Psp6I CCWGG 3 cut(s) 208, 565, 827
PspFI CCCAGC 2 cut(s) 602, 1018
PspGI CCWGG 3 cut(s) 208, 565, 827
PspN4I GGNNCC 2 cut(s) 826, 1071
PspPI GGNCC 2 cut(s) 944, 1496
PspXI VCTCGAGB 2 cut(s) 224, 1828
PstNI CAGNNNCTG 2 cut(s) 834, 1064
PsuI RGATCY 3 cut(s) 258, 1629, 1735
PvuII CAGCTG 1 cut(s) 1334
RsaI GTAC 6 cut(s) 500, 797, 1111, 1264, 1330, 1540
RsaNI GTAC 6 cut(s) 499, 796, 1110, 1263, 1329, 1539
RseI CAYNNNNRTG 2 cut(s) 12, 1491
SacI GAGCTC 2 cut(s) 1005, 1440
SaqAI TTAA 3 cut(s) 711, 1698, 1838
SatI GCNGC 5 cut(s) 186, 362, 1154, 1335, 1379
Sau3AI GATC 8 cut(s) 212, 258, 267, 637, 1216, 1387, 1629, 1735
Sau96I GGNCC 2 cut(s) 944, 1496
ScaI AGTACT 1 cut(s) 1540
SchI GAGTC 2 cut(s) 953, 1805
ScrFI CCNGG 3 cut(s) 210, 567, 829
SduI GDGCHC 3 cut(s) 1005, 1440, 1488
SfaNI GCATC 3 cut(s) 666, 715, 967
Sfr274I CTCGAG 2 cut(s) 224, 1828
SinI GGWCC 1 cut(s) 944
SlaI CTCGAG 2 cut(s) 224, 1828
SmiMI CAYNNNNRTG 2 cut(s) 12, 1491
SmlI CTYRAG 7 cut(s) 224, 263, 345, 633, 819, 1363, 1828
SmoI CTYRAG 7 cut(s) 224, 263, 345, 633, 819, 1363, 1828
SnaBI TACGTA 1 cut(s) 331
SseBI AGGCCT 1 cut(s) 1099
SsiI CCGC 1 cut(s) 1153
SspMI CTAG 3 cut(s) 41, 447, 1455
SstI GAGCTC 2 cut(s) 1005, 1440
StuI AGGCCT 1 cut(s) 1099
StyD4I CCNGG 3 cut(s) 208, 565, 827
StyI CCWWGG 1 cut(s) 996
TaaI ACNGT 5 cut(s) 316, 372, 665, 1531, 1884
TaiI ACGT 2 cut(s) 333, 575
TaqI TCGA 5 cut(s) 225, 660, 1219, 1626, 1829
TaqII GACCGA 1 cut(s) 989
TatI WGTACW 3 cut(s) 498, 1109, 1538
TauI GCSGC 1 cut(s) 1156
TfiI GAWTC 4 cut(s) 53, 670, 1623, 1806
Tru1I TTAA 3 cut(s) 711, 1698, 1838
Tru9I TTAA 3 cut(s) 711, 1698, 1838
TscAI CASTG 5 cut(s) 222, 540, 600, 748, 1168
TseFI GTSAC 1 cut(s) 26
TseI GCWGC 4 cut(s) 185, 361, 1334, 1378
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 9 cut(s) 17, 66, 389, 401, 419, 617, 640, 724, 1202
TspRI CASTG 5 cut(s) 222, 540, 600, 748, 1168
Van91I CCANNNNNTGG 1 cut(s) 101
VpaK11BI GGWCC 1 cut(s) 944
XapI RAATTY 3 cut(s) 117, 1400, 1646
XbaI TCTAGA 1 cut(s) 1454
XceI RCATGY 3 cut(s) 182, 1043, 1417
XhoI CTCGAG 2 cut(s) 224, 1828
XmiI GTMKAC 1 cut(s) 1410
XspI CTAG 3 cut(s) 41, 447, 1455
ZrmI AGTACT 1 cut(s) 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.