Rw2G034350

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000083
Physical Location & Seq
Reverse (-)
56427943 .. 56448885
20943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G034350.1

Sequence Viewer

Length: 2790 bp
ATGATGCACACTCTTCCTATTCACATTTTGGGAAAGTTGTCGAATGAAGACTGGTGGTTGTTACTTGCAAAACATGCCTTTAAAAATGGGAAGCCTTCTGCATTTCCAAACTTGGAAGAAATTGGTAAAAAGATAGTAGTTAAGTATAACGGTCTCCCTTTAGCTGCAAAAACACTTGGGGGTCTTTTACGTGGCATAATATATAGATTCAGAGGATTTGAATATCGATTCCTCACTCCCCAAAAGTCTGGTCTTGATGTGGCTGACACGCAAGCTGTTCGTCTTCCCACTACTATTTTTGTTTGCTTCATTAGCATAGATTGTGGCAAATCGGGTTCTAGCTATACTGAAAAAGTTACTGGAATTACTTACATTTCGGACTCAAACTTCGTCGACACTGGTGAAAGTAACTTCATATTGGATAAATATTTGGATGCCTATCAACAGCCATATCAATCTCTCAGGAGCTTCCCTCAAGGCATCAGGAACTGCTACAAAATAAACATTACAAGTGGAACCAGATATTTGATTCGAGCAATTTTTGTGCATGGGAATTATGTGAAGCTGACGAATGCATCCCTTGCGGTAACCAAGGAGCTCATACATTATGTCCCAAGACCCAGAAACTATATACAACTTTGTCTGGTGAACAAGCTCTCTGGAGTTCCATTTATATCAGCAATAGAGTTGAGGCCTCTTCCCAACTCAACTTATTCTCAAGAGGGGTCATTGGCACTTGTCTCACGGTTTGACACTGGTCAAATAGCACCTAATTTTGCAGCATACAGGTATCCATTCGATGTTCTCGATCGCTTCTGGTATGCCTTTAATGACCTGGACTATTGGACACAACTAAGTAGCTCAACTAACAGCGACGTCTCTACTACCATGCCACCTAAACATGAGTTGAACTATATTCAACTACCGTTTGTTGTTATGAGTACTGCTTCCACGCCCAAAAATGCGAATGGTTCATTGAACAATTTTTGGCCGCCTGAGGCTAACGATAAAAATGCAGATTATTACATTTACATGCACTTTGCAGAAGTTCAAAGACTCCAATCCAACCAGTTGAGACAATTCAACATTTCTATCAATGGACAGTACTTTTTTGGGCCACTCGTTCCTACATACTTCAAGACTAACACTATTTATAGCCGCACTGCTTTGAAGGGAGGACTAAATAACGTTACAATCTCCAGGACTGAGAACTCTTCCCTTCCACCCATTCTCAATGCCTATGAGATTTATGTTCTAAAAATATTCTCAGAGTCGGAAACAACCCAAGAAGATGTTGGCGCAATCACAAACATAAAGTCAAGTTATAAAATTAAAAGGAATTGGCAAGGAGATCCATGTACCCCTACACGTTACTTATGGGAAGGTCTAAACTGTAGTTATCATGAAGATGATGAGTCGCCAAGAATTATGTCCTTGTACTTGGCCCGCAGTGGTTTACAAGGGGAGATAGATCCGTATATATCCAACCTTGCAATGTTACAAACTTTAGATCTATCAAACAACAATTTGACAGGACCAATTCCAGAGTTTTTGTCTCAGTTACCAAACTTGGTTCATCTAAACTTGGAGAAAAACAAGCTCATGGGCTCGATTCCAGAAGGATTAATACAAAGAAAGAATAATGGTTTCTTGACTTTAAGATTGTGCGAAAATCCAAATCTACGTGGAACAGTCTCTTGCAGCAAGAAGAAGAAGCAGAATGTCCTCCTTTTTGTAGCTATATATTTCAATTGTTGGAGTTTCAATCCTCGTGGGGACATTACATATGCAAAAGACACAGTTCAGTTTGGGACATTGGAGTCATCAAAGCGAAAGTTTGCGCACTCTGAAATAGTCAAGATCACCAACAACTTTGAGAGGATTCTTGGCAAAGGTGGATTTGGAACAGTGTATCATGGACACCTAGACGACACTCACGTAGCTGTCAAAATGCTTTCGCCATCATCAGTTCAAGGGTTTCAACAATTTCATGCTGAGGTAAATCTTCTTATTAGAGTTCATCATAAAAACTTGACAAGCCTTGTTGGATATTGCAATGAAGAGACAAACTTAGGGCTTGTCTATGAATACATGGCTAATGGAAACTTACAAGAACATTTATCAGATAGCAGTTCACATATCATAAGCTGGGAAGGTAGACTTCGAATAGCATCAGATGCCGCACAAGGATTGGAGTACTTGCACTATGGTATTAAGCCGCCAATAATCCATAGGGATGTGAAATCAGCAAATATTTTGTTGAATGAAAATTTCCAAGCCAAGGTATCAGACTTTGGCCTATCCAAAAATTTCCCTACAGATATTGGGACTCATATATCGACAGTTGTTGCAGGAACTCCTGGATATCTTGACCCTGAGTATTACCTATCAAACAGGTTAACTGAGAAAAGCGATGTTTATAGCTTCGGGATTGTGCTGTTGGAGATTATCACAGGTCGACCTGTTTTATCGAAAACGGATGAGAGAATTCACATTAGCCAATGGGTTGGTTTCATGCTTGAAACAGGAAACATTTACAGTATTGTCGATTCAAAGTTGGAGGGAAACTTCACTGTCAACTCTGTGTGGAAAGCTGTGGAGATAGCAATGGCATGTGTGTCCCCAAGTGCCATAAAAAGGCCAATTATGAGTCAAGTAGTTATAGAACTAAAGGAGTGTTTGGCGACACAAATGGGTGAAACAAAGCATAACAATGAAACTGAATTAACAGGTTCCGCTGGCCGGATGTCTAACGATTCCATTGCTATGCTAAGTCCCTCAGTAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

929

Amino Acids

104.56

Weight (kDa)

8.34

Isoelectric Point (pI)

38.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 106 - 417 6e-82 Malectin-like domain
LRR_8 PF13855 474 - 534 7.8e-08 Leucine rich repeat
LRR_4 PF12799 500 - 534 2.4e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 625 - 830 9.6e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 625 - 834 9.8e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1326
AasI GACNNNNNNGTC 1 cut(s) 1819
AatII GACGTC 1 cut(s) 879
Acc16I TGCGCA 1 cut(s) 1842
AccI GTMKAC 3 cut(s) 393, 2158, 2458
AciI CCGC 7 cut(s) 584, 992, 1159, 1447, 2181, 2219, 2736
AclI AACGTT 1 cut(s) 1188
AclWI GGATC 2 cut(s) 1346, 1466
AcoI YGGCCR 2 cut(s) 989, 2740
AcsI RAATTY 3 cut(s) 2269, 2308, 2487
AcyI GRCGYC 1 cut(s) 876
AfaI GTAC 5 cut(s) 943, 1106, 1360, 1439, 2198
AfiI CCNNNNNNNGG 4 cut(s) 2281, 2637, 2742, 2784
AflIII ACRYGT 1 cut(s) 1367
AjnI CCWGG 3 cut(s) 834, 1199, 2359
Alw21I GWGCWC 1 cut(s) 600
Alw26I GTCTC 7 cut(s) 158, 745, 883, 1069, 1560, 1699, 2057
AlwI GGATC 2 cut(s) 1346, 1466
AlwNI CAGNNNCTG 1 cut(s) 489
AoxI GGCC 7 cut(s) 692, 989, 1115, 1443, 2296, 2639, 2740
ApeKI GCWGC 3 cut(s) 164, 779, 1701
ApoI RAATTY 3 cut(s) 2269, 2308, 2487
ArsI GACNNNNNNTTYG 6 cut(s) 235, 267, 371, 403, 1301, 1333
AseI ATTAAT 1 cut(s) 1625
AspLEI GCGC 2 cut(s) 1301, 1843
AspS9I GGNCC 3 cut(s) 1115, 1444, 1535
AsuHPI GGTGA 4 cut(s) 413, 658, 1855, 2708
AsuII TTCGAA 1 cut(s) 2164
AvaII GGWCC 1 cut(s) 1535
AxyI CCTNAGG 1 cut(s) 996
BanII GRGCYC 2 cut(s) 600, 1610
BarI GAAGNNNNNNTAC 2 cut(s) 1611, 1643
BauI CACGAG 1 cut(s) 1770
BbsI GAAGAC 2 cut(s) 54, 275
Bbv12I GWGCWC 1 cut(s) 600
BbvCI CCTCAGC 1 cut(s) 1995
BbvI GCAGC 3 cut(s) 151, 791, 1713
BccI CCATC 1 cut(s) 1969
BcgI CGANNNNNNTGC 6 cut(s) 260, 294, 995, 1029, 2744, 2778
BciT130I CCWGG 3 cut(s) 836, 1201, 2361
BciVI GTATCC 1 cut(s) 801
BcoDI GTCTC 7 cut(s) 158, 745, 883, 1069, 1560, 1699, 2057
BfaI CTAG 2 cut(s) 339, 1925
BfmI CTRYAG 2 cut(s) 1393, 2316
BfuI GTATCC 1 cut(s) 801
BglII AGATCT 1 cut(s) 1510
BisI GCNGC 7 cut(s) 165, 780, 992, 1159, 1702, 2181, 2219
BlsI GCNGC 7 cut(s) 166, 781, 993, 1160, 1703, 2182, 2220
BmcAI AGTACT 3 cut(s) 943, 1106, 2198
Bme1390I CCNGG 3 cut(s) 836, 1201, 2361
Bme18I GGWCC 1 cut(s) 1535
BmgT120I GGNCC 3 cut(s) 1115, 1444, 1535
BmiI GGNNCC 2 cut(s) 517, 2734
BmrFI CCNGG 3 cut(s) 836, 1201, 2361
BmsI GCATC 5 cut(s) 424, 489, 584, 2167, 2180
BoxI GACNNNNGTC 1 cut(s) 756
BpiI GAAGAC 2 cut(s) 54, 275
BplI GAGNNNNNCTC 2 cut(s) 457, 489
BpmI CTGGAG 2 cut(s) 681, 1183
Bpu10I CCTNAGC 1 cut(s) 1995
Bpu14I TTCGAA 1 cut(s) 2164
BpuEI CTTGAG 2 cut(s) 459, 702
Bsa29I ATCGAT 1 cut(s) 226
BsaAI YACGTR 3 cut(s) 191, 1685, 1939
BsaBI GATNNNNATC 1 cut(s) 438
BsaHI GRCGYC 1 cut(s) 876
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 2 cut(s) 591, 2280
Bsc4I CCNNNNNNNGG 4 cut(s) 2281, 2637, 2742, 2784
Bse1I ACTGG 5 cut(s) 56, 364, 403, 760, 1069
Bse21I CCTNAGG 1 cut(s) 996
Bse3DI GCAATG 4 cut(s) 1500, 2062, 2613, 2760
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 3 cut(s) 836, 1201, 2361
BseCI ATCGAT 1 cut(s) 226
BseDI CCNNGG 2 cut(s) 591, 2280
BseGI GGATG 5 cut(s) 439, 575, 2242, 2485, 2751
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 4 cut(s) 2281, 2637, 2742, 2784
BseMI GCAATG 4 cut(s) 1500, 2062, 2613, 2760
BseMII CTCAG 8 cut(s) 475, 987, 1197, 1281, 1571, 1986, 2367, 2394
BseNI ACTGG 5 cut(s) 56, 364, 403, 760, 1069
BseXI GCAGC 3 cut(s) 151, 791, 1713
BseYI CCCAGC 1 cut(s) 2148
Bsh1285I CGRYCG 1 cut(s) 811
BshFI GGCC 7 cut(s) 694, 991, 1117, 1445, 2298, 2641, 2742
BshVI ATCGAT 1 cut(s) 226
BsiEI CGRYCG 1 cut(s) 811
BsiHKAI GWGCWC 1 cut(s) 600
BsiSI CCGG 1 cut(s) 2743
BslFI GGGAC 6 cut(s) 596, 1790, 1825, 2341, 2605, 2760
BslI CCNNNNNNNGG 4 cut(s) 2281, 2637, 2742, 2784
BsmAI GTCTC 7 cut(s) 158, 745, 883, 1069, 1560, 1699, 2057
BsmBI CGTCTC 1 cut(s) 883
BsmFI GGGAC 6 cut(s) 596, 1790, 1825, 2341, 2605, 2760
BsmI GAATGC 1 cut(s) 577
BsnI GGCC 7 cut(s) 694, 991, 1117, 1445, 2298, 2641, 2742
Bso31I GGTCTC 1 cut(s) 158
Bsp119I TTCGAA 1 cut(s) 2164
Bsp1286I GDGCHC 2 cut(s) 600, 1610
Bsp143I GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
BspACI CCGC 7 cut(s) 584, 992, 1159, 1447, 2181, 2219, 2736
BspANI GGCC 7 cut(s) 694, 991, 1117, 1445, 2298, 2641, 2742
BspCNI CTCAG 8 cut(s) 474, 988, 1198, 1280, 1570, 1987, 2368, 2395
BspDI ATCGAT 1 cut(s) 226
BspHI TCATGA 1 cut(s) 1402
BspLI GGNNCC 2 cut(s) 517, 2734
BspPI GGATC 2 cut(s) 1346, 1466
BspT104I TTCGAA 1 cut(s) 2164
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 4 cut(s) 1500, 2062, 2613, 2760
BsrI ACTGG 5 cut(s) 56, 364, 403, 760, 1069
BssECI CCNNGG 2 cut(s) 591, 2280
BssMI GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
BssNI GRCGYC 1 cut(s) 876
BssSI CACGAG 1 cut(s) 1770
BssT1I CCWWGG 2 cut(s) 591, 2280
Bst2BI CACGAG 1 cut(s) 1770
Bst2UI CCWGG 3 cut(s) 836, 1201, 2361
Bst6I CTCTTC 4 cut(s) 18, 702, 1219, 2055
BstACI GRCGYC 1 cut(s) 876
BstAPI GCANNNNNTGC 3 cut(s) 74, 581, 2177
BstBAI YACGTR 3 cut(s) 191, 1685, 1939
BstBI TTCGAA 1 cut(s) 2164
BstC8I GCNNGC 3 cut(s) 273, 1447, 2740
BstEII GGTNACC 1 cut(s) 586
BstENI CCTNNNNNAGG 1 cut(s) 2782
BstF5I GGATG 5 cut(s) 439, 575, 2242, 2485, 2751
BstHHI GCGC 2 cut(s) 1301, 1843
BstKTI GATC 5 cut(s) 811, 1354, 1474, 1513, 1863
BstMAI GTCTC 7 cut(s) 158, 745, 883, 1069, 1560, 1699, 2057
BstMBI GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
BstMCI CGRYCG 1 cut(s) 811
BstMWI GCNNNNNNNGC 4 cut(s) 74, 312, 581, 2177
BstNI CCWGG 3 cut(s) 836, 1201, 2361
BstNSI RCATGY 3 cut(s) 77, 1036, 2616
BstPAI GACNNNNGTC 1 cut(s) 756
BstPI GGTNACC 1 cut(s) 586
BstSCI CCNGG 3 cut(s) 834, 1199, 2359
BstSFI CTRYAG 2 cut(s) 1393, 2316
BstV1I GCAGC 3 cut(s) 151, 791, 1713
BstV2I GAAGAC 2 cut(s) 54, 275
BstX2I RGATCY 3 cut(s) 1351, 1471, 1510
BstXI CCANNNNNNTGG 2 cut(s) 248, 2507
BstYI RGATCY 3 cut(s) 1351, 1471, 1510
Bsu15I ATCGAT 1 cut(s) 226
Bsu36I CCTNAGG 1 cut(s) 996
BsuI GTATCC 1 cut(s) 801
BsuRI GGCC 7 cut(s) 694, 991, 1117, 1445, 2298, 2641, 2742
BsuTUI ATCGAT 1 cut(s) 226
BtgZI GCGATG 1 cut(s) 2427
BtsCI GGATG 5 cut(s) 439, 575, 2242, 2485, 2751
BtsI GCAGTG 2 cut(s) 1161, 1456
BtsIMutI CAGTG 6 cut(s) 396, 753, 1161, 1456, 1914, 2571
Cac8I GCNNGC 3 cut(s) 273, 1447, 2740
CaiI CAGNNNCTG 1 cut(s) 489
CciI TCATGA 1 cut(s) 1402
CfoI GCGC 2 cut(s) 1301, 1843
Cfr13I GGNCC 3 cut(s) 1115, 1444, 1535
ClaI ATCGAT 1 cut(s) 226
Csp6I GTAC 5 cut(s) 942, 1105, 1359, 1438, 2197
CspCI CAANNNNNGTGG 2 cut(s) 1753, 1788
CviQI GTAC 5 cut(s) 942, 1105, 1359, 1438, 2197
DpnI GATC 5 cut(s) 810, 1353, 1473, 1512, 1862
DpnII GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
DraI TTTAAA 1 cut(s) 82
DrdI GACNNNNNNGTC 1 cut(s) 1819
DseDI GACNNNNNNGTC 1 cut(s) 1819
EaeI YGGCCR 2 cut(s) 989, 2740
Eam1104I CTCTTC 4 cut(s) 18, 702, 1219, 2055
EarI CTCTTC 4 cut(s) 18, 702, 1219, 2055
Ecl136II GAGCTC 1 cut(s) 598
Eco130I CCWWGG 2 cut(s) 591, 2280
Eco147I AGGCCT 1 cut(s) 694
Eco24I GRGCYC 2 cut(s) 600, 1610
Eco31I GGTCTC 1 cut(s) 158
Eco32I GATATC 1 cut(s) 2366
Eco47I GGWCC 1 cut(s) 1535
Eco53kI GAGCTC 1 cut(s) 598
Eco81I CCTNAGG 1 cut(s) 996
Eco91I GGTNACC 1 cut(s) 586
EcoICRI GAGCTC 1 cut(s) 598
EcoNI CCTNNNNNAGG 1 cut(s) 2782
EcoO65I GGTNACC 1 cut(s) 586
EcoRI GAATTC 1 cut(s) 2487
EcoRII CCWGG 3 cut(s) 834, 1199, 2359
EcoRV GATATC 1 cut(s) 2366
EcoT14I CCWWGG 2 cut(s) 591, 2280
EcoT22I ATGCAT 1 cut(s) 577
EcoT38I GRGCYC 2 cut(s) 600, 1610
ErhI CCWWGG 2 cut(s) 591, 2280
Esp3I CGTCTC 1 cut(s) 883
FalI AAGNNNNNCTT 2 cut(s) 2145, 2177
FaqI GGGAC 6 cut(s) 596, 1790, 1825, 2341, 2605, 2760
FauI CCCGC 1 cut(s) 1454
FauNDI CATATG 1 cut(s) 1786
FblI GTMKAC 3 cut(s) 393, 2158, 2458
Fnu4HI GCNGC 7 cut(s) 165, 780, 992, 1159, 1702, 2181, 2219
FokI GGATG 5 cut(s) 446, 562, 2249, 2492, 2758
FriOI GRGCYC 2 cut(s) 600, 1610
Fsp4HI GCNGC 7 cut(s) 165, 780, 992, 1159, 1702, 2181, 2219
FspBI CTAG 2 cut(s) 339, 1925
FspI TGCGCA 1 cut(s) 1842
GlaI GCGC 2 cut(s) 1300, 1842
GluI GCNGC 7 cut(s) 165, 780, 992, 1159, 1702, 2181, 2219
GsaI CCCAGC 1 cut(s) 2152
GsuI CTGGAG 2 cut(s) 681, 1183
HaeIII GGCC 7 cut(s) 694, 991, 1117, 1445, 2298, 2641, 2742
HapII CCGG 1 cut(s) 2743
HhaI GCGC 2 cut(s) 1301, 1843
Hin1I GRCGYC 1 cut(s) 876
Hin6I GCGC 2 cut(s) 1299, 1841
HinP1I GCGC 2 cut(s) 1299, 1841
HincII GTYRAC 4 cut(s) 394, 2400, 2459, 2578
HindII GTYRAC 4 cut(s) 394, 2400, 2459, 2578
HpaI GTTAAC 1 cut(s) 2400
HpaII CCGG 1 cut(s) 2743
HphI GGTGA 4 cut(s) 413, 658, 1855, 2708
Hpy166II GTNNAC 8 cut(s) 394, 649, 1457, 2135, 2159, 2400, 2459, 2578
Hpy188I TCNGA 8 cut(s) 212, 379, 1270, 1276, 1849, 2125, 2176, 2290
Hpy8I GTNNAC 8 cut(s) 394, 649, 1457, 2135, 2159, 2400, 2459, 2578
Hpy99I CGWCG 2 cut(s) 395, 878
HpyAV CCTTC 6 cut(s) 105, 1165, 1229, 1376, 1613, 2147
HpyCH4IV ACGT 6 cut(s) 190, 876, 1188, 1369, 1684, 1938
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 312, 581, 2177
HpySE526I ACGT 6 cut(s) 190, 876, 1188, 1369, 1684, 1938
Hsp92I GRCGYC 1 cut(s) 876
HspAI GCGC 2 cut(s) 1299, 1841
KspAI GTTAAC 1 cut(s) 2400
Kzo9I GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
LmnI GCTCC 2 cut(s) 465, 595
Lsp1109I GCAGC 3 cut(s) 151, 791, 1713
LweI GCATC 5 cut(s) 424, 489, 584, 2167, 2180
MaeI CTAG 2 cut(s) 339, 1925
MaeII ACGT 6 cut(s) 190, 876, 1188, 1369, 1684, 1938
MaeIII GTNAC 8 cut(s) 60, 355, 407, 586, 1189, 1370, 1497, 1560
MalI GATC 5 cut(s) 810, 1353, 1473, 1512, 1862
MboI GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
MfeI CAATTG 1 cut(s) 1750
MflI RGATCY 3 cut(s) 1351, 1471, 1510
MhlI GDGCHC 2 cut(s) 600, 1610
MlyI GAGTC 7 cut(s) 374, 1050, 1280, 1424, 1829, 2323, 2659
MmeI TCCRAC 7 cut(s) 1089, 1254, 1509, 1736, 2026, 2421, 2538
Mph1103I ATGCAT 1 cut(s) 577
MseI TTAA 9 cut(s) 81, 141, 828, 1332, 1625, 1658, 2214, 2399, 2726
MslI CAYNNNNRTG 5 cut(s) 1031, 1407, 2235, 2712, 2765
MspA1I CMGCKG 1 cut(s) 2738
MspI CCGG 1 cut(s) 2743
MspR9I CCNGG 3 cut(s) 836, 1201, 2361
MunI CAATTG 1 cut(s) 1750
Mva1269I GAATGC 1 cut(s) 577
MvaI CCWGG 3 cut(s) 836, 1201, 2361
MwoI GCNNNNNNNGC 4 cut(s) 74, 312, 581, 2177
NdeI CATATG 1 cut(s) 1786
NdeII GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
NlaIV GGNNCC 2 cut(s) 517, 2734
NsbI TGCGCA 1 cut(s) 1842
NsiI ATGCAT 1 cut(s) 577
NspI RCATGY 3 cut(s) 77, 1036, 2616
NspV TTCGAA 1 cut(s) 2164
PagI TCATGA 1 cut(s) 1402
PceI AGGCCT 1 cut(s) 694
PcsI WCGNNNNNNNCGW 2 cut(s) 804, 1935
PctI GAATGC 1 cut(s) 577
PfeI GAWTC 7 cut(s) 207, 228, 529, 1612, 1882, 2549, 2756
PfoI TCCNGGA 2 cut(s) 1199, 2359
PkrI GCNGC 7 cut(s) 166, 781, 993, 1160, 1703, 2182, 2220
Ple19I CGATCG 1 cut(s) 811
PleI GAGTC 7 cut(s) 374, 1050, 1279, 1423, 1828, 2323, 2658
PpsI GAGTC 7 cut(s) 374, 1050, 1279, 1423, 1828, 2323, 2658
Ppu21I YACGTR 3 cut(s) 191, 1685, 1939
PshAI GACNNNNGTC 1 cut(s) 756
PshBI ATTAAT 1 cut(s) 1625
PsiI TTATAA 1 cut(s) 1326
Psp124BI GAGCTC 1 cut(s) 600
Psp1406I AACGTT 1 cut(s) 1188
Psp6I CCWGG 3 cut(s) 834, 1199, 2359
PspEI GGTNACC 1 cut(s) 586
PspFI CCCAGC 1 cut(s) 2148
PspGI CCWGG 3 cut(s) 834, 1199, 2359
PspN4I GGNNCC 2 cut(s) 517, 2734
PspPI GGNCC 3 cut(s) 1115, 1444, 1535
PstNI CAGNNNCTG 1 cut(s) 489
PsuI RGATCY 3 cut(s) 1351, 1471, 1510
PvuI CGATCG 1 cut(s) 811
RsaI GTAC 5 cut(s) 943, 1106, 1360, 1439, 2198
RsaNI GTAC 5 cut(s) 942, 1105, 1359, 1438, 2197
RseI CAYNNNNRTG 5 cut(s) 1031, 1407, 2235, 2712, 2765
SacI GAGCTC 1 cut(s) 600
SalI GTCGAC 2 cut(s) 392, 2457
SaqAI TTAA 9 cut(s) 81, 141, 828, 1332, 1625, 1658, 2214, 2399, 2726
SatI GCNGC 7 cut(s) 165, 780, 992, 1159, 1702, 2181, 2219
Sau3AI GATC 5 cut(s) 808, 1351, 1471, 1510, 1860
Sau96I GGNCC 3 cut(s) 1115, 1444, 1535
ScaI AGTACT 3 cut(s) 943, 1106, 2198
SchI GAGTC 7 cut(s) 374, 1050, 1280, 1424, 1829, 2323, 2659
ScrFI CCNGG 3 cut(s) 836, 1201, 2361
SduI GDGCHC 2 cut(s) 600, 1610
SfaNI GCATC 5 cut(s) 424, 489, 584, 2167, 2180
SfcI CTRYAG 2 cut(s) 1393, 2316
SfuI TTCGAA 1 cut(s) 2164
SinI GGWCC 1 cut(s) 1535
SmiMI CAYNNNNRTG 5 cut(s) 1031, 1407, 2235, 2712, 2765
SmlI CTYRAG 2 cut(s) 474, 717
SmoI CTYRAG 2 cut(s) 474, 717
SseBI AGGCCT 1 cut(s) 694
SsiI CCGC 7 cut(s) 584, 992, 1159, 1447, 2181, 2219, 2736
SspI AATATT 3 cut(s) 428, 1263, 2254
SspMI CTAG 2 cut(s) 339, 1925
SstI GAGCTC 1 cut(s) 600
StuI AGGCCT 1 cut(s) 694
StyD4I CCNGG 3 cut(s) 834, 1199, 2359
StyI CCWWGG 2 cut(s) 591, 2280
TaiI ACGT 6 cut(s) 193, 879, 1191, 1372, 1687, 1941
TatI WGTACW 4 cut(s) 941, 1104, 1437, 2196
TauI GCSGC 4 cut(s) 994, 1161, 2183, 2221
TfiI GAWTC 7 cut(s) 207, 228, 529, 1612, 1882, 2549, 2756
Tru1I TTAA 9 cut(s) 81, 141, 828, 1332, 1625, 1658, 2214, 2399, 2726
Tru9I TTAA 9 cut(s) 81, 141, 828, 1332, 1625, 1658, 2214, 2399, 2726
TscAI CASTG 6 cut(s) 403, 760, 1168, 1456, 1914, 2578
TseI GCWGC 3 cut(s) 164, 779, 1701
TspGWI ACGGA 2 cut(s) 1464, 2492
TspRI CASTG 6 cut(s) 403, 760, 1168, 1456, 1914, 2578
VpaK11BI GGWCC 1 cut(s) 1535
VspI ATTAAT 1 cut(s) 1625
XagI CCTNNNNNAGG 1 cut(s) 2782
XapI RAATTY 3 cut(s) 2269, 2308, 2487
XceI RCATGY 3 cut(s) 77, 1036, 2616
XcmI CCANNNNNNNNNTGG 1 cut(s) 1292
XmiI GTMKAC 3 cut(s) 393, 2158, 2458
XspI CTAG 2 cut(s) 339, 1925
ZraI GACGTC 1 cut(s) 877
ZrmI AGTACT 3 cut(s) 943, 1106, 2198
Zsp2I ATGCAT 1 cut(s) 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.