FvH4_6g32670

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000083
Physical Location & Seq
Reverse (-)
25745636 .. 25750648
5013 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g32670.t1

Sequence Viewer

Length: 2685 bp
ATGTTGCTTCCCATGAATAAGCAAATCCTCTTTGCGCTGCTGGGTGGTCTTTCTCTTATACTACTCCTAGTTCATGCCCAGGGTGAAGATCAATCAGGCTTCATAAGTATAGATTGCGGCCGAACTGAAAATTTCAGCTACACTGAAAAGACAACAGGAATCAACTACATTTCCGACACAGGCTTCGTAGACACAGGTGAAAGTAAGCTCGTTTTGCGTTATGTAAAAGATAATTACCAGCAGCCATACTGGGGTGTTAGGAGCTTTCCTGAAGGAATCAGGAACTGCTACAAGATCAATGTTACAACTGGGGACAAATATTTGATCAGAGTAAGCTTCGTGTATGGGAACTATGATGGCAAAGGTAAGCTACCAACATTCCTCCTTTATCTGGGAACAAACTTGTGGGATTCAGTGAAGGTGAAGAACGAATCCTATGTCATAAACAAGGAGCTCATCCATGTCGCTCCCCGAAATTATATTCATGTTTGTCTGATGAATAATGGCTCCGGAGTTCCGTTTATATCAGCAATAGAATTAAGGCCGTTGAACGTTACATCTTATCCAACACAAACTGGGTCCTTGGCACTCAACTGGAGGCTTGACATTGGACAAACAGGACCTGATTTAAAATATTATAGGTATCCGAAGGATATTCACGATCGCTTTTGGGATCCCTTTGAGGATGTTGACAATGAGTGGTTTACACTGAATACTTCATCCACCGTCGACTTTGACGACCACAATCTCTACGAACCAGCATCGGTTGTCATGAGCACAGCGGCCACAGCAAAAAATGCAACTGATCCCTTGATGTTATGGTGGGATCCTCCTGTTGATGCAAATGATACAGAATATTATGTTTACATGCACTTTGCAGAACTTGAAGTCCAAGCCAACGGGTCTAGATGGCAGTACATTACTAACAACGGAAAGCCCTACATGGAGTCATTCGCTGCTAGTTACTTGTACACGACGACTATTTACAGCACCAAACCTCAAAGAGGAAGTCAGAACTTCTCAATCATCAAGGCTGAGAACTCTACCCTTCCACCCAGTATCAATGGACTTGAGATTTACACACTAAAAGAATTCCTAGAACTAGAAACAAACCAAGACGACGTTGAAGCAATCATAAAAATCAAGTCAACTTATGAAATTACAAAGAATTGGCAAGGAGATCCATGTCTCCCACTAAACTACTCGTGGGAAGGCTTAAAATGTAGCAATCCCCAAAGTGACTCCCCAAGAATCATTTCCTTGGACTTGTCTTCGAGTGGATTAACAGGAGTGATTTCTCCTTCAATTGAAAATCTCGCAATGATACAAACATTGGATTTATCAAACAACAACCTGACAGGACCAATTCCAGACTTTTTGTCTCAATTGCGCGAGTTAAATATCCTGAACCTGGAGAATAACGAGTTCACAGGCTCACTTCCGCTAGGACTCGCTGAAAAAAGAAACAATGACCTTCTATCAATAAGTTTGTGTGGCAACCCAAATCTAGCCGGAAATAAACCTTGCAATACAAAGAAGAAGAAGAATAACAAGAACAAAATCATTATTCCAATAATTGGAGCTATTGCCGGAATTTCAGCCTTCATATTAGCTGGAGCAGTTTTCTTCTGTTTCTGTAAGAGGAAAAGAAAACATGTAGTTGCAATGGATCCAAAACCCAACCCTGGATCAGTGGAACTGGAGCAAAAAAACCGAAAGTTTACTTACTCAGAGATCCTCAAGATCACAAACAACCGACAAAGGGTTCTTGGCAAAGGTGGATTCGGAACTGTTTATCATGGCTATATTGATGACAAAACTCAAGTAGCTGTCAAGCTGCTTTCACAAACATCAAGTCAAGGACTTCAACAATTTCATGCAGAGGTTCATCTACTTATGCGAGTTCATCATACAAACTTGACTAGCCTCGTTGGATATTGTGATGACGAACTCAACAAAGGGCTTGTGTATGAGTACATGGCCAACGGAAACTTACAAGCATATCTCTCAGATAAAACTTCAGATGTCTTGACTTGGGAAGGAAGACTTCAGATAGCAACAGAAGCTGCACAAGGATTGGAGTACCTACACTACGGTTGTAAACCACCTATGATCCATAGAGATGTGAAATCAACAAACATCTTACTCAATGAAAAGTTCCAAGCCAAACTCTCTGATTTTGGCCTATCAAGAAACTTCGCTCCAGGCGATGGGACTCATATAGTTACTGGTGTTGCTGGTACTCCTGGCTACCTTGCCCCTGAGTACCATCAATCAAACAGGCTGAATGAGAAGAGTGATGTTTATAGCTTTGGGATTGTGCTGCTTGAGATTATCACTGGGCGACCTGTTTACGCAAGAACGAATGGTGAGAGAACTCACATTACTAGATGGGTTGAACTCATGCTTCCTCGAGGAGACATTTACAGCATCATCGATCCAATGTTGGAGAGAAACTTCAATGTCAACTCGGCCTGGAAAGCTGTTGAAACAGCAATGGCATGTGTATCTGCAGAGCCCAGTAAGAGGCCAGTCATGAGCACTGTTGTGATGGAACTAAAAGAGTGTTTGGCATCACAGCTTGATCTGACAAACTTCAACAGCTATGACACTGAACTAGGAAGTAGTTCCATAAATGTGTCTCAAAATAACTCCATCATTATGATGCGTCCCTCAGTCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

895

Amino Acids

100.37

Weight (kDa)

6.0

Isoelectric Point (pI)

32.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 37 - 361 1.2e-103 Malectin-like domain
LRR_8 PF13855 420 - 475 2.4e-06 Leucine rich repeat
Pkinase PF00069 586 - 849 1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 587 - 852 2.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 2412
AccB7I CCANNNNNTGG 2 cut(s) 1577, 2210
AccI GTMKAC 2 cut(s) 189, 729
AccII CGCG 1 cut(s) 1392
AccIII TCCGGA 1 cut(s) 509
AciI CCGC 3 cut(s) 117, 782, 1442
AclI AACGTT 1 cut(s) 552
AcoI YGGCCR 3 cut(s) 118, 783, 1980
AcsI RAATTY 3 cut(s) 130, 1091, 1593
AcuI CTGAAG 3 cut(s) 291, 2004, 2033
AfaI GTAC 6 cut(s) 917, 971, 1976, 2084, 2242, 2267
AflIII ACRYGT 1 cut(s) 1654
AhdI GACNNNNNGTC 1 cut(s) 1378
AjnI CCWGG 6 cut(s) 78, 1410, 1684, 2203, 2245, 2474
AjuI GAANNNNNNNTTGG 2 cut(s) 1240, 1272
AleI CACNNNNGTG 1 cut(s) 2546
AloI GAACNNNNNNTCC 2 cut(s) 873, 905
Alw21I GWGCWC 3 cut(s) 456, 779, 2543
Alw26I GTCTC 4 cut(s) 1193, 1386, 2412, 2646
AlwNI CAGNNNCTG 3 cut(s) 285, 623, 2066
Ama87I CYCGRG 1 cut(s) 2412
Aor13HI TCCGGA 1 cut(s) 509
AoxI GGCC 7 cut(s) 118, 542, 783, 1980, 2182, 2472, 2528
ApeKI GCWGC 6 cut(s) 37, 241, 956, 1837, 2066, 2323
ApoI RAATTY 3 cut(s) 130, 1091, 1593
ArsI GACNNNNNNTTYG 8 cut(s) 167, 199, 423, 455, 994, 1026, 1840, 1872
Asp700I GAANNNNTTC 2 cut(s) 1255, 2626
AspLEI GCGC 2 cut(s) 37, 1392
AspS9I GGNCC 3 cut(s) 579, 620, 1361
AsuHPI GGTGA 4 cut(s) 95, 209, 433, 2381
AvaI CYCGRG 1 cut(s) 2412
AvaII GGWCC 3 cut(s) 579, 620, 1361
BalI TGGCCA 1 cut(s) 1982
BamHI GGATCC 3 cut(s) 673, 826, 1669
BanII GRGCYC 2 cut(s) 456, 2520
BauI CACGAG 1 cut(s) 1204
BbsI GAAGAC 2 cut(s) 1263, 2050
Bbv12I GWGCWC 3 cut(s) 456, 779, 2543
BbvI GCAGC 6 cut(s) 24, 253, 943, 1824, 2053, 2310
BccI CCATC 7 cut(s) 350, 903, 2204, 2277, 2385, 2545, 2663
BceAI ACGGC 1 cut(s) 529
BciT130I CCWGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
BciVI GTATCC 1 cut(s) 654
BclI TGATCA 1 cut(s) 324
BcoDI GTCTC 4 cut(s) 1193, 1386, 2412, 2646
BfmI CTRYAG 1 cut(s) 2511
BfuI GTATCC 1 cut(s) 654
BisI GCNGC 8 cut(s) 38, 118, 242, 783, 957, 1838, 2067, 2324
BlsI GCNGC 8 cut(s) 39, 119, 243, 784, 958, 1839, 2068, 2325
Bme1390I CCNGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
Bme18I GGWCC 3 cut(s) 579, 620, 1361
BmeRI GACNNNNNGTC 1 cut(s) 1378
BmeT110I CYCGRG 1 cut(s) 2412
BmgT120I GGNCC 3 cut(s) 579, 620, 1361
BmiI GGNNCC 5 cut(s) 508, 580, 675, 828, 1671
BmrFI CCNGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
BmrI ACTGGG 6 cut(s) 259, 318, 585, 1050, 2349, 2514
BmsI GCATC 5 cut(s) 770, 829, 2439, 2582, 2655
BmuI ACTGGG 6 cut(s) 259, 318, 585, 1050, 2349, 2514
BpiI GAAGAC 2 cut(s) 1263, 2050
BpmI CTGGAG 5 cut(s) 616, 1433, 1635, 1721, 2187
BpuEI CTTGAG 4 cut(s) 1091, 1724, 1806, 2348
Bsa29I ATCGAT 1 cut(s) 2436
BsaJI CCNNGG 5 cut(s) 78, 79, 582, 1260, 1684
BsaWI WCCGGW 1 cut(s) 509
Bse3DI GCAATG 3 cut(s) 1326, 1671, 2502
BseAI TCCGGA 1 cut(s) 509
BseBI CCWGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
BseCI ATCGAT 1 cut(s) 2436
BseDI CCNNGG 5 cut(s) 78, 79, 582, 1260, 1684
BseGI GGATG 3 cut(s) 456, 691, 719
BseMI GCAATG 3 cut(s) 1326, 1671, 2502
BseMII CTCAG 4 cut(s) 1026, 1743, 2022, 2253
BseRI GAGGAG 1 cut(s) 2430
BseX3I CGGCCG 1 cut(s) 118
BseXI GCAGC 6 cut(s) 24, 253, 943, 1824, 2053, 2310
BseYI CCCAGC 1 cut(s) 40
BsgI GTGCAG 1 cut(s) 2052
Bsh1236I CGCG 1 cut(s) 1392
Bsh1285I CGRYCG 2 cut(s) 121, 664
BshFI GGCC 7 cut(s) 120, 544, 785, 1982, 2184, 2474, 2530
BshVI ATCGAT 1 cut(s) 2436
BsiEI CGRYCG 2 cut(s) 121, 664
BsiHKAI GWGCWC 3 cut(s) 456, 779, 2543
BsiHKCI CYCGRG 1 cut(s) 2412
BsiSI CCGG 3 cut(s) 510, 1512, 1590
BslFI GGGAC 3 cut(s) 326, 2227, 2655
BsmAI GTCTC 4 cut(s) 1193, 1386, 2412, 2646
BsmFI GGGAC 3 cut(s) 326, 2227, 2655
BsnI GGCC 7 cut(s) 120, 544, 785, 1982, 2184, 2474, 2530
BsoBI CYCGRG 1 cut(s) 2412
Bsp1286I GDGCHC 4 cut(s) 456, 779, 2520, 2543
Bsp13I TCCGGA 1 cut(s) 509
Bsp1407I TGTACA 1 cut(s) 969
BspACI CCGC 3 cut(s) 117, 782, 1442
BspANI GGCC 7 cut(s) 120, 544, 785, 1982, 2184, 2474, 2530
BspCNI CTCAG 4 cut(s) 1027, 1742, 2021, 2254
BspDI ATCGAT 1 cut(s) 2436
BspEI TCCGGA 1 cut(s) 509
BspFNI CGCG 1 cut(s) 1392
BspHI TCATGA 2 cut(s) 771, 2535
BspLI GGNNCC 5 cut(s) 508, 580, 675, 828, 1671
BspMAI CTGCAG 1 cut(s) 2515
BsrDI GCAATG 3 cut(s) 1326, 1671, 2502
BsrGI TGTACA 1 cut(s) 969
BssECI CCNNGG 5 cut(s) 78, 79, 582, 1260, 1684
BssSI CACGAG 1 cut(s) 1204
BssT1I CCWWGG 2 cut(s) 582, 1260
Bst2BI CACGAG 1 cut(s) 1204
Bst2UI CCWGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
Bst4CI ACNGT 4 cut(s) 727, 1792, 2096, 2545
Bst6I CTCTTC 1 cut(s) 2288
BstAPI GCANNNNNTGC 1 cut(s) 797
BstAUI TGTACA 1 cut(s) 969
BstDEI CTNAG 5 cut(s) 1035, 1729, 2008, 2262, 2674
BstENI CCTNNNNNAGG 2 cut(s) 1002, 2677
BstF5I GGATG 3 cut(s) 456, 691, 719
BstFNI CGCG 1 cut(s) 1392
BstHHI GCGC 2 cut(s) 37, 1392
BstMAI GTCTC 4 cut(s) 1193, 1386, 2412, 2646
BstMCI CGRYCG 2 cut(s) 121, 664
BstMWI GCNNNNNNNGC 5 cut(s) 214, 788, 797, 2063, 2480
BstNI CCWGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
BstNSI RCATGY 3 cut(s) 871, 1658, 2505
BstSCI CCNGG 6 cut(s) 78, 1410, 1684, 2203, 2245, 2474
BstSFI CTRYAG 1 cut(s) 2511
BstUI CGCG 1 cut(s) 1392
BstV1I GCAGC 6 cut(s) 24, 253, 943, 1824, 2053, 2310
BstV2I GAAGAC 2 cut(s) 1263, 2050
BstX2I RGATCY 5 cut(s) 673, 826, 1180, 1669, 1734
BstYI RGATCY 5 cut(s) 673, 826, 1180, 1669, 1734
BstZI CGGCCG 1 cut(s) 118
Bsu15I ATCGAT 1 cut(s) 2436
BsuI GTATCC 1 cut(s) 654
BsuRI GGCC 7 cut(s) 120, 544, 785, 1982, 2184, 2474, 2530
BsuTUI ATCGAT 1 cut(s) 2436
BtgZI GCGATG 1 cut(s) 2223
BtsCI GGATG 3 cut(s) 456, 691, 719
BtsIMutI CAGTG 7 cut(s) 141, 420, 707, 1698, 2337, 2541, 2610
CaiI CAGNNNCTG 3 cut(s) 285, 623, 2066
CciI TCATGA 2 cut(s) 771, 2535
CfoI GCGC 2 cut(s) 37, 1392
Cfr13I GGNCC 3 cut(s) 579, 620, 1361
ClaI ATCGAT 1 cut(s) 2436
CseI GACGC 1 cut(s) 2657
Csp6I GTAC 6 cut(s) 916, 970, 1975, 2083, 2241, 2266
CviQI GTAC 6 cut(s) 916, 970, 1975, 2083, 2241, 2266
DdeI CTNAG 5 cut(s) 1035, 1729, 2008, 2262, 2674
DraI TTTAAA 1 cut(s) 630
DriI GACNNNNNGTC 1 cut(s) 1378
EaeI YGGCCR 3 cut(s) 118, 783, 1980
EagI CGGCCG 1 cut(s) 118
Eam1104I CTCTTC 1 cut(s) 2288
Eam1105I GACNNNNNGTC 1 cut(s) 1378
EarI CTCTTC 1 cut(s) 2288
Ecl136II GAGCTC 1 cut(s) 454
EclXI CGGCCG 1 cut(s) 118
Eco130I CCWWGG 2 cut(s) 582, 1260
Eco24I GRGCYC 2 cut(s) 456, 2520
Eco47I GGWCC 3 cut(s) 579, 620, 1361
Eco52I CGGCCG 1 cut(s) 118
Eco53kI GAGCTC 1 cut(s) 454
Eco57I CTGAAG 3 cut(s) 291, 2004, 2033
Eco88I CYCGRG 1 cut(s) 2412
EcoICRI GAGCTC 1 cut(s) 454
EcoNI CCTNNNNNAGG 2 cut(s) 1002, 2677
EcoO109I RGGNCCY 2 cut(s) 579, 620
EcoRI GAATTC 1 cut(s) 1091
EcoRII CCWGG 6 cut(s) 78, 1410, 1684, 2203, 2245, 2474
EcoT14I CCWWGG 2 cut(s) 582, 1260
EcoT38I GRGCYC 2 cut(s) 456, 2520
ErhI CCWWGG 2 cut(s) 582, 1260
FalI AAGNNNNNCTT 2 cut(s) 2031, 2063
FaqI GGGAC 3 cut(s) 326, 2227, 2655
FbaI TGATCA 1 cut(s) 324
FblI GTMKAC 2 cut(s) 189, 729
Fnu4HI GCNGC 8 cut(s) 38, 118, 242, 783, 957, 1838, 2067, 2324
FokI GGATG 3 cut(s) 443, 698, 706
FriOI GRGCYC 2 cut(s) 456, 2520
Fsp4HI GCNGC 8 cut(s) 38, 118, 242, 783, 957, 1838, 2067, 2324
GlaI GCGC 2 cut(s) 36, 1391
GluI GCNGC 8 cut(s) 38, 118, 242, 783, 957, 1838, 2067, 2324
GsaI CCCAGC 1 cut(s) 44
GsuI CTGGAG 5 cut(s) 616, 1433, 1635, 1721, 2187
HaeIII GGCC 7 cut(s) 120, 544, 785, 1982, 2184, 2474, 2530
HapII CCGG 3 cut(s) 510, 1512, 1590
HgaI GACGC 1 cut(s) 2657
HhaI GCGC 2 cut(s) 37, 1392
Hin6I GCGC 2 cut(s) 35, 1390
HinP1I GCGC 2 cut(s) 35, 1390
HincII GTYRAC 4 cut(s) 691, 730, 1149, 2467
HindII GTYRAC 4 cut(s) 691, 730, 1149, 2467
HindIII AAGCTT 1 cut(s) 334
HpaII CCGG 3 cut(s) 510, 1512, 1590
HphI GGTGA 4 cut(s) 95, 209, 433, 2381
Hpy99I CGWCG 3 cut(s) 731, 979, 1124
HpyAV CCTTC 9 cut(s) 266, 412, 643, 1058, 1205, 1311, 1484, 1612, 2033
HpyCH4III ACNGT 4 cut(s) 727, 1792, 2096, 2545
HpyCH4IV ACGT 2 cut(s) 552, 1122
HpyCH4V TGCA 9 cut(s) 800, 842, 871, 878, 1527, 1664, 1880, 2069, 2513
HpyF10VI GCNNNNNNNGC 5 cut(s) 214, 788, 797, 2063, 2480
HpyF3I CTNAG 5 cut(s) 1035, 1729, 2008, 2262, 2674
HpySE526I ACGT 2 cut(s) 552, 1122
HspAI GCGC 2 cut(s) 35, 1390
Kpn2I TCCGGA 1 cut(s) 509
Ksp22I TGATCA 1 cut(s) 324
LmnI GCTCC 8 cut(s) 261, 451, 472, 512, 1580, 1616, 1702, 2206
Lsp1109I GCAGC 6 cut(s) 24, 253, 943, 1824, 2053, 2310
LweI GCATC 5 cut(s) 770, 829, 2439, 2582, 2655
MaeII ACGT 2 cut(s) 552, 1122
MaeIII GTNAC 5 cut(s) 301, 553, 962, 1238, 2224
MboII GAAGA 9 cut(s) 98, 436, 1263, 1549, 1552, 1555, 1618, 2055, 2305
MfeI CAATTG 2 cut(s) 1305, 1385
MflI RGATCY 5 cut(s) 673, 826, 1180, 1669, 1734
MhlI GDGCHC 4 cut(s) 456, 779, 2520, 2543
MlsI TGGCCA 1 cut(s) 1982
MluNI TGGCCA 1 cut(s) 1982
MlyI GAGTC 4 cut(s) 956, 1235, 1443, 2209
MmeI TCCRAC 4 cut(s) 198, 590, 1912, 2427
Mox20I TGGCCA 1 cut(s) 1982
MroI TCCGGA 1 cut(s) 509
MroXI GAANNNNTTC 2 cut(s) 1255, 2626
MscI TGGCCA 1 cut(s) 1982
MseI TTAA 5 cut(s) 539, 629, 1217, 1283, 1397
MslI CAYNNNNRTG 5 cut(s) 2121, 2546, 2636, 2660, 2663
Msp20I TGGCCA 1 cut(s) 1982
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 3 cut(s) 510, 1512, 1590
MspR9I CCNGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
MunI CAATTG 2 cut(s) 1305, 1385
MvaI CCWGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
MvnI CGCG 1 cut(s) 1392
MwoI GCNNNNNNNGC 5 cut(s) 214, 788, 797, 2063, 2480
NlaIV GGNNCC 5 cut(s) 508, 580, 675, 828, 1671
NmeAIII GCCGAG 1 cut(s) 2450
NmuCI GTSAC 1 cut(s) 1238
NspI RCATGY 3 cut(s) 871, 1658, 2505
OliI CACNNNNGTG 1 cut(s) 2546
PaeR7I CTCGAG 1 cut(s) 2412
PagI TCATGA 2 cut(s) 771, 2535
PasI CCCWGGG 1 cut(s) 79
PciI ACATGT 1 cut(s) 1654
PcsI WCGNNNNNNNCGW 2 cut(s) 735, 2205
PdmI GAANNNNTTC 2 cut(s) 1255, 2626
PfeI GAWTC 6 cut(s) 159, 276, 410, 431, 1251, 1782
PflMI CCANNNNNTGG 2 cut(s) 1577, 2210
PkrI GCNGC 8 cut(s) 39, 119, 243, 784, 958, 1839, 2068, 2325
Ple19I CGATCG 1 cut(s) 664
PleI GAGTC 4 cut(s) 955, 1235, 1443, 2209
PpsI GAGTC 4 cut(s) 955, 1235, 1443, 2209
PpuMI RGGWCCY 2 cut(s) 579, 620
PscI ACATGT 1 cut(s) 1654
Psp124BI GAGCTC 1 cut(s) 456
Psp1406I AACGTT 1 cut(s) 552
Psp5II RGGWCCY 2 cut(s) 579, 620
Psp6I CCWGG 6 cut(s) 78, 1410, 1684, 2203, 2245, 2474
PspFI CCCAGC 1 cut(s) 40
PspGI CCWGG 6 cut(s) 78, 1410, 1684, 2203, 2245, 2474
PspN4I GGNNCC 5 cut(s) 508, 580, 675, 828, 1671
PspPI GGNCC 3 cut(s) 579, 620, 1361
PspPPI RGGWCCY 2 cut(s) 579, 620
PspXI VCTCGAGB 1 cut(s) 2412
PsrI GAACNNNNNNTAC 2 cut(s) 2368, 2400
PstI CTGCAG 1 cut(s) 2515
PstNI CAGNNNCTG 3 cut(s) 285, 623, 2066
PsuI RGATCY 5 cut(s) 673, 826, 1180, 1669, 1734
PvuI CGATCG 1 cut(s) 664
RsaI GTAC 6 cut(s) 917, 971, 1976, 2084, 2242, 2267
RsaNI GTAC 6 cut(s) 916, 970, 1975, 2083, 2241, 2266
RseI CAYNNNNRTG 5 cut(s) 2121, 2546, 2636, 2660, 2663
SacI GAGCTC 1 cut(s) 456
SalI GTCGAC 1 cut(s) 728
SaqAI TTAA 5 cut(s) 539, 629, 1217, 1283, 1397
SatI GCNGC 8 cut(s) 38, 118, 242, 783, 957, 1838, 2067, 2324
Sau96I GGNCC 3 cut(s) 579, 620, 1361
SchI GAGTC 4 cut(s) 956, 1235, 1443, 2209
ScrFI CCNGG 6 cut(s) 80, 1412, 1686, 2205, 2247, 2476
SduI GDGCHC 4 cut(s) 456, 779, 2520, 2543
SfaNI GCATC 5 cut(s) 770, 829, 2439, 2582, 2655
SfcI CTRYAG 1 cut(s) 2511
Sfr274I CTCGAG 1 cut(s) 2412
SinI GGWCC 3 cut(s) 579, 620, 1361
SlaI CTCGAG 1 cut(s) 2412
SmiMI CAYNNNNRTG 5 cut(s) 2121, 2546, 2636, 2660, 2663
SmlI CTYRAG 5 cut(s) 1070, 1739, 1821, 2327, 2412
SmoI CTYRAG 5 cut(s) 1070, 1739, 1821, 2327, 2412
SsiI CCGC 3 cut(s) 117, 782, 1442
SspI AATATT 3 cut(s) 320, 635, 857
SstI GAGCTC 1 cut(s) 456
StyD4I CCNGG 6 cut(s) 78, 1410, 1684, 2203, 2245, 2474
StyI CCWWGG 2 cut(s) 582, 1260
TaaI ACNGT 4 cut(s) 727, 1792, 2096, 2545
TaiI ACGT 2 cut(s) 555, 1125
TaqI TCGA 4 cut(s) 729, 1274, 2413, 2436
TatI WGTACW 3 cut(s) 915, 969, 1974
TauI GCSGC 2 cut(s) 120, 785
TfiI GAWTC 6 cut(s) 159, 276, 410, 431, 1251, 1782
Tru1I TTAA 5 cut(s) 539, 629, 1217, 1283, 1397
Tru9I TTAA 5 cut(s) 539, 629, 1217, 1283, 1397
TscAI CASTG 7 cut(s) 148, 420, 714, 1698, 2344, 2548, 2617
TseFI GTSAC 1 cut(s) 1238
TseI GCWGC 6 cut(s) 37, 241, 956, 1837, 2066, 2323
Tsp45I GTSAC 1 cut(s) 1238
TspGWI ACGGA 3 cut(s) 507, 945, 2001
TspRI CASTG 7 cut(s) 148, 420, 714, 1698, 2344, 2548, 2617
Van91I CCANNNNNTGG 2 cut(s) 1577, 2210
VpaK11BI GGWCC 3 cut(s) 579, 620, 1361
XagI CCTNNNNNAGG 2 cut(s) 1002, 2677
XapI RAATTY 3 cut(s) 130, 1091, 1593
XbaI TCTAGA 1 cut(s) 905
XceI RCATGY 3 cut(s) 871, 1658, 2505
XhoI CTCGAG 1 cut(s) 2412
XmiI GTMKAC 2 cut(s) 189, 729
XmnI GAANNNNTTC 2 cut(s) 1255, 2626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.