Rorug02G0368900

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000083
Physical Location & Seq
Forward (+)
47088872 .. 47091737
2866 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0368900.1

Sequence Viewer

Length: 1758 bp
ATGGAAGAAGAAGATGATTTGTATATACCTGTGGCAAAGCGGAGAGCGATGGCAGCGCAGAGGATTCTTCACCGGAAGGGGGATGCCTCCGGGCTTGAAGAGGAATCGGAGAAAGCCAAGGCTGATGAAGTGAAGCCTAGTCTTCTTGTGAAAGCTTCACAGTTGAAACGTGATGCTCCTGAGATTACTCAAGCCGAGCAGCTGGTGCTGCAAGAGAAAGAGATGATTGAGCATTTGTCTGATCGCAAGACCCTCATGTCGGTTCGTGAGTTGGCTAAGGGAATCACTTATACGGACCCTTTGCCCACAGGTTGGAAGCCCCCATTGCAGATTAGAAGGATGCTGACAAAGCACTGTGATTTGATTCGAAAGCAGTGGCACATCATAGTTAGTGGCGAAGATATTCCACCGCCTATTAAGAATTTCAAGGATATGAGATTTCCTGAACCCATTTTGAAGATGTTGAAAACCAAGGGGATTGTTCAACCGACGCCCATTCAGGTGCAAGGTCTTCCGGTGATTTTGTCAGGGAGGGATATGATTGGTATTGCATTTACGGGTTCAGGAAAGACGTTGGTTTTTGTGTTGCCATTGATTATGATGGCAATGCAGGAGGAGATTATGATGCCAATTGTTCCAGGAGAAGGGCCTTTTGGATTGATTATTTGCCCATCCAGGGAGCTCGCAAGGCAGACTTATGAAGTAGTGGAACAATTTCTGGCTCCTATGAGAGAGGCTGGGTATCCAGAGATAAGGCCTTTGTTATGCATTGGTGGAGTGGAAATGAAGTCGCAGTTGGATATTGTGCGCAAAGGTGTTCATATAGTTGTTGCTACTCCCGGGAGGTTAAAGGATATGCTGGCAAAGAAAAAAATGAACCTTGATAATTGCAGATATCTAACTTTAGATGAGGCTGATAGATTGGTAGATTTGGGATTTGAAGATGACATAAGAGAAGTTTTTGACCATTTCAAAGCTCAACGACAGACACTCTTATTTTCAGCCACCATGCCTGCAAAAATTCAGAACTTCGCTAGAAGTGCTTTGGTTAAGCCTGTCACTGTCAACGTTGGACGAGCTGGAGCAGCAAATCTTGATGTGATTCAGGAGGTTGAGTACGTGAAGCAAGAAGCCAAGATTGTTTACCTTCTCGAATGTCTACAAAAGACCCCACCTCCAGTTCTGATATTCTGTGAAAATAAAGCTGATGTCGATGATATTCATGAATATCTTCTGTTAAAAGGAGTGGAAGCAGTGGCCATTCATGGAGGGAAGGATCAGGAAGAGAGAGAGTATGCCATTTCTTCCTTCAAGGCAGGGAAGAAAGATGTCTTAGTGGCAACTGATGTTGCCTCAAAAGGTTTGGATTTTCCTGATATTCAACACGTCATTAACTATGACATGCCAGCAGAAATCGAAAACTATGTTCACAGGATTGGACGAACAGGAAGATGTGGCAAGACTGGAATAGCAACAACATTTATAAACAAGAACCAGAGTGAGACTACACTTCTAGATTTGAAGCACCTATTGCAAGAGGCAAAACAGAGGATTCCACCTGTTTTGGCTGAGCTTAATGATCCAATGGAAGATGTTGAAGATATTACTGATGCAAGTGGAGTTAAAGGTTGTGCTTATTGTGGTGGGCTTGGTCATCGTATCCGTGATTGCCCGAAACTAGAGCAGCAGAAAAGCATGGCAATTTCCTCCTCTAGAAGAGATTATTATGGTTCTGGTGGTTACAGAGGAGAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

585

Amino Acids

65.51

Weight (kDa)

6.25

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 164 - 343 1.4e-41 DEAD/DEAH box helicase
ResIII PF04851 184 - 337 9.6e-06 Type III restriction enzyme, res subunit
Helicase_C PF00271 379 - 486 1.1e-31 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1484
AasI GACNNNNNNGTC 1 cut(s) 256
Acc16I TGCGCA 1 cut(s) 809
AccB7I CCANNNNNTGG 1 cut(s) 312
AccI GTMKAC 1 cut(s) 1159
AciI CCGC 2 cut(s) 40, 410
AclI AACGTT 1 cut(s) 1068
AclWI GGATC 2 cut(s) 1284, 1574
AcoI YGGCCR 1 cut(s) 1257
AcsI RAATTY 2 cut(s) 421, 1020
AcyI GRCGYC 1 cut(s) 491
AfaI GTAC 1 cut(s) 1118
AfiI CCNNNNNNNGG 5 cut(s) 79, 259, 312, 644, 676
AflIII ACRYGT 1 cut(s) 1384
AjiI CACGTC 1 cut(s) 1387
AjnI CCWGG 2 cut(s) 637, 674
AjuI GAANNNNNNNTTGG 4 cut(s) 636, 668, 779, 811
AluBI AGCT 7 cut(s) 155, 202, 682, 977, 1079, 1205, 1573
AluI AGCT 7 cut(s) 155, 202, 682, 977, 1079, 1205, 1573
Alw21I GWGCWC 1 cut(s) 684
Alw26I GTCTC 1 cut(s) 1496
AlwI GGATC 2 cut(s) 1284, 1574
Ama87I CYCGRG 1 cut(s) 839
AoxI GGCC 3 cut(s) 647, 755, 1257
ApeKI GCWGC 5 cut(s) 53, 199, 208, 1085, 1684
ApoI RAATTY 2 cut(s) 421, 1020
Asp700I GAANNNNTTC 3 cut(s) 402, 714, 1230
AspLEI GCGC 2 cut(s) 58, 810
AspS9I GGNCC 2 cut(s) 295, 647
AsuC2I CCSGG 3 cut(s) 91, 840, 841
AsuHPI GGTGA 2 cut(s) 62, 529
AsuII TTCGAA 1 cut(s) 367
AvaI CYCGRG 1 cut(s) 839
AvaII GGWCC 1 cut(s) 295
BalI TGGCCA 1 cut(s) 1259
BanII GRGCYC 1 cut(s) 684
BbsI GAAGAC 2 cut(s) 134, 503
Bbv12I GWGCWC 1 cut(s) 684
BbvI GCAGC 5 cut(s) 65, 195, 211, 1097, 1696
BccI CCATC 3 cut(s) 43, 595, 679
BciT130I CCWGG 2 cut(s) 639, 676
BciVI GTATCC 2 cut(s) 753, 1670
BcnI CCSGG 3 cut(s) 91, 840, 841
BcoDI GTCTC 1 cut(s) 1496
BfaI CTAG 5 cut(s) 138, 1035, 1514, 1679, 1713
BfuI GTATCC 2 cut(s) 753, 1670
BisI GCNGC 5 cut(s) 54, 200, 209, 1086, 1685
BlpI GCTNAGC 1 cut(s) 1569
BlsI GCNGC 5 cut(s) 55, 201, 210, 1087, 1686
Bme1390I CCNGG 5 cut(s) 91, 639, 676, 840, 841
Bme18I GGWCC 1 cut(s) 295
BmeT110I CYCGRG 1 cut(s) 839
BmgBI CACGTC 1 cut(s) 1387
BmgT120I GGNCC 2 cut(s) 295, 647
BmiI GGNNCC 2 cut(s) 297, 723
BmrFI CCNGG 5 cut(s) 91, 639, 676, 840, 841
BmsI GCATC 5 cut(s) 73, 163, 330, 615, 1600
BpiI GAAGAC 2 cut(s) 134, 503
BpmI CTGGAG 2 cut(s) 1101, 1161
Bpu10I CCTNAGC 1 cut(s) 276
Bpu1102I GCTNAGC 1 cut(s) 1569
Bpu14I TTCGAA 1 cut(s) 367
BpuEI CTTGAG 1 cut(s) 174
BpuMI CCSGG 3 cut(s) 91, 840, 841
BsaAI YACGTR 1 cut(s) 1120
BsaHI GRCGYC 1 cut(s) 491
BsaJI CCNNGG 4 cut(s) 117, 471, 675, 839
BsaWI WCCGGW 2 cut(s) 72, 514
BsaXI ACNNNNNCTCC 4 cut(s) 1100, 1130, 1159, 1189
Bsc4I CCNNNNNNNGG 5 cut(s) 79, 259, 312, 644, 676
Bse1I ACTGG 2 cut(s) 1178, 1468
Bse3DI GCAATG 2 cut(s) 323, 612
BseBI CCWGG 2 cut(s) 639, 676
BseDI CCNNGG 4 cut(s) 117, 471, 675, 839
BseGI GGATG 3 cut(s) 88, 345, 671
BseLI CCNNNNNNNGG 5 cut(s) 79, 259, 312, 644, 676
BseMI GCAATG 2 cut(s) 323, 612
BseMII CTCAG 2 cut(s) 171, 1560
BseNI ACTGG 2 cut(s) 1178, 1468
BseRI GAGGAG 2 cut(s) 629, 1699
BseXI GCAGC 5 cut(s) 65, 195, 211, 1097, 1696
BseYI CCCAGC 1 cut(s) 737
BshFI GGCC 3 cut(s) 649, 757, 1259
BsiHKAI GWGCWC 1 cut(s) 684
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 4 cut(s) 73, 90, 515, 840
BslI CCNNNNNNNGG 5 cut(s) 79, 259, 312, 644, 676
BsmAI GTCTC 1 cut(s) 1496
BsnI GGCC 3 cut(s) 649, 757, 1259
BsoBI CYCGRG 1 cut(s) 839
Bsp119I TTCGAA 1 cut(s) 367
Bsp1286I GDGCHC 1 cut(s) 684
Bsp143I GATC 3 cut(s) 241, 1276, 1579
Bsp1720I GCTNAGC 1 cut(s) 1569
BspACI CCGC 2 cut(s) 40, 410
BspANI GGCC 3 cut(s) 649, 757, 1259
BspCNI CTCAG 2 cut(s) 172, 1561
BspHI TCATGA 1 cut(s) 1222
BspLI GGNNCC 2 cut(s) 297, 723
BspPI GGATC 2 cut(s) 1284, 1574
BspT104I TTCGAA 1 cut(s) 367
BsrDI GCAATG 2 cut(s) 323, 612
BsrI ACTGG 2 cut(s) 1178, 1468
BssECI CCNNGG 4 cut(s) 117, 471, 675, 839
BssMI GATC 3 cut(s) 241, 1276, 1579
BssNI GRCGYC 1 cut(s) 491
BssT1I CCWWGG 2 cut(s) 117, 471
Bst2UI CCWGG 2 cut(s) 639, 676
Bst4CI ACNGT 3 cut(s) 162, 356, 1063
Bst6I CTCTTC 3 cut(s) 93, 1278, 1711
BstACI GRCGYC 1 cut(s) 491
BstAPI GCANNNNNTGC 2 cut(s) 205, 1531
BstBAI YACGTR 1 cut(s) 1120
BstBI TTCGAA 1 cut(s) 367
BstC8I GCNNGC 4 cut(s) 684, 861, 1014, 1407
BstDEI CTNAG 4 cut(s) 180, 276, 1333, 1569
BstF5I GGATG 3 cut(s) 88, 345, 671
BstHHI GCGC 2 cut(s) 58, 810
BstKTI GATC 3 cut(s) 244, 1279, 1582
BstMAI GTCTC 1 cut(s) 1496
BstMBI GATC 3 cut(s) 241, 1276, 1579
BstMWI GCNNNNNNNGC 9 cut(s) 53, 205, 208, 325, 349, 688, 1040, 1085, 1531
BstNI CCWGG 2 cut(s) 639, 676
BstNSI RCATGY 1 cut(s) 1405
BstSCI CCNGG 5 cut(s) 89, 637, 674, 838, 839
BstV1I GCAGC 5 cut(s) 65, 195, 211, 1097, 1696
BstV2I GAAGAC 2 cut(s) 134, 503
BsuI GTATCC 2 cut(s) 753, 1670
BsuRI GGCC 3 cut(s) 649, 757, 1259
BtgZI GCGATG 1 cut(s) 62
BtrI CACGTC 1 cut(s) 1387
BtsCI GGATG 3 cut(s) 88, 345, 671
BtsI GCAGTG 2 cut(s) 380, 1260
BtsIMutI CAGTG 4 cut(s) 352, 380, 1059, 1260
Cac8I GCNNGC 4 cut(s) 684, 861, 1014, 1407
CciI TCATGA 1 cut(s) 1222
CfoI GCGC 2 cut(s) 58, 810
Cfr13I GGNCC 2 cut(s) 295, 647
Cfr9I CCCGGG 1 cut(s) 839
CseI GACGC 1 cut(s) 499
Csp6I GTAC 1 cut(s) 1117
CspCI CAANNNNNGTGG 2 cut(s) 1545, 1580
CviAII CATG 6 cut(s) 256, 1009, 1223, 1265, 1402, 1696
CviQI GTAC 1 cut(s) 1117
DdeI CTNAG 4 cut(s) 180, 276, 1333, 1569
DpnI GATC 3 cut(s) 243, 1278, 1581
DpnII GATC 3 cut(s) 241, 1276, 1579
DrdI GACNNNNNNGTC 1 cut(s) 256
DseDI GACNNNNNNGTC 1 cut(s) 256
EaeI YGGCCR 1 cut(s) 1257
Eam1104I CTCTTC 3 cut(s) 93, 1278, 1711
EarI CTCTTC 3 cut(s) 93, 1278, 1711
Ecl136II GAGCTC 1 cut(s) 682
Eco130I CCWWGG 2 cut(s) 117, 471
Eco147I AGGCCT 1 cut(s) 757
Eco24I GRGCYC 1 cut(s) 684
Eco32I GATATC 1 cut(s) 896
Eco47I GGWCC 1 cut(s) 295
Eco53kI GAGCTC 1 cut(s) 682
Eco88I CYCGRG 1 cut(s) 839
EcoICRI GAGCTC 1 cut(s) 682
EcoO109I RGGNCCY 1 cut(s) 647
EcoRII CCWGG 2 cut(s) 637, 674
EcoRV GATATC 1 cut(s) 896
EcoT14I CCWWGG 2 cut(s) 117, 471
EcoT22I ATGCAT 1 cut(s) 770
EcoT38I GRGCYC 1 cut(s) 684
ErhI CCWWGG 2 cut(s) 117, 471
FaeI CATG 6 cut(s) 259, 1012, 1226, 1268, 1405, 1699
FalI AAGNNNNNCTT 2 cut(s) 679, 711
FatI CATG 6 cut(s) 255, 1008, 1222, 1264, 1401, 1695
FblI GTMKAC 1 cut(s) 1159
Fnu4HI GCNGC 5 cut(s) 54, 200, 209, 1086, 1685
FokI GGATG 3 cut(s) 95, 352, 658
FriOI GRGCYC 1 cut(s) 684
Fsp4HI GCNGC 5 cut(s) 54, 200, 209, 1086, 1685
FspBI CTAG 5 cut(s) 138, 1035, 1514, 1679, 1713
FspI TGCGCA 1 cut(s) 809
GlaI GCGC 2 cut(s) 57, 809
GluI GCNGC 5 cut(s) 54, 200, 209, 1086, 1685
GsaI CCCAGC 1 cut(s) 741
GsuI CTGGAG 2 cut(s) 1101, 1161
HaeIII GGCC 3 cut(s) 649, 757, 1259
HapII CCGG 4 cut(s) 73, 90, 515, 840
HgaI GACGC 1 cut(s) 499
HhaI GCGC 2 cut(s) 58, 810
Hin1I GRCGYC 1 cut(s) 491
Hin1II CATG 6 cut(s) 259, 1012, 1226, 1268, 1405, 1699
Hin6I GCGC 2 cut(s) 56, 808
HinP1I GCGC 2 cut(s) 56, 808
HincII GTYRAC 1 cut(s) 1066
HindII GTYRAC 1 cut(s) 1066
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 6 cut(s) 64, 104, 282, 364, 1102, 1552
HpaII CCGG 4 cut(s) 73, 90, 515, 840
HphI GGTGA 2 cut(s) 62, 529
Hpy166II GTNNAC 4 cut(s) 1066, 1144, 1160, 1429
Hpy188I TCNGA 4 cut(s) 109, 241, 1026, 1185
Hpy8I GTNNAC 4 cut(s) 1066, 1144, 1160, 1429
Hpy99I CGWCG 1 cut(s) 493
HpyAV CCTTC 6 cut(s) 70, 330, 638, 1157, 1267, 1318
HpyCH4III ACNGT 3 cut(s) 162, 356, 1063
HpyCH4IV ACGT 5 cut(s) 169, 572, 1068, 1119, 1386
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 205, 208, 325, 349, 688, 1040, 1085, 1531
HpyF3I CTNAG 4 cut(s) 180, 276, 1333, 1569
HpySE526I ACGT 5 cut(s) 169, 572, 1068, 1119, 1386
Hsp92I GRCGYC 1 cut(s) 491
Hsp92II CATG 6 cut(s) 259, 1012, 1226, 1268, 1405, 1699
HspAI GCGC 2 cut(s) 56, 808
Kzo9I GATC 3 cut(s) 241, 1276, 1579
LmnI GCTCC 4 cut(s) 181, 679, 727, 1082
Lsp1109I GCAGC 5 cut(s) 65, 195, 211, 1097, 1696
LweI GCATC 5 cut(s) 73, 163, 330, 615, 1600
MaeI CTAG 5 cut(s) 138, 1035, 1514, 1679, 1713
MaeII ACGT 5 cut(s) 169, 572, 1068, 1119, 1386
MaeIII GTNAC 2 cut(s) 1057, 1739
MalI GATC 3 cut(s) 243, 1278, 1581
MboI GATC 3 cut(s) 241, 1276, 1579
MfeI CAATTG 1 cut(s) 630
MhlI GDGCHC 1 cut(s) 684
MlsI TGGCCA 1 cut(s) 1259
MluCI AATT 6 cut(s) 421, 630, 713, 886, 1020, 1701
MluNI TGGCCA 1 cut(s) 1259
MmeI TCCRAC 3 cut(s) 293, 777, 1051
Mox20I TGGCCA 1 cut(s) 1259
Mph1103I ATGCAT 1 cut(s) 770
MroXI GAANNNNTTC 3 cut(s) 402, 714, 1230
MscI TGGCCA 1 cut(s) 1259
MseI TTAA 7 cut(s) 417, 848, 1050, 1238, 1392, 1575, 1623
MslI CAYNNNNRTG 1 cut(s) 500
Msp20I TGGCCA 1 cut(s) 1259
MspA1I CMGCKG 1 cut(s) 202
MspI CCGG 4 cut(s) 73, 90, 515, 840
MspR9I CCNGG 5 cut(s) 91, 639, 676, 840, 841
MunI CAATTG 1 cut(s) 630
MvaI CCWGG 2 cut(s) 639, 676
MwoI GCNNNNNNNGC 9 cut(s) 53, 205, 208, 325, 349, 688, 1040, 1085, 1531
NciI CCSGG 3 cut(s) 91, 840, 841
NdeII GATC 3 cut(s) 241, 1276, 1579
NlaIII CATG 6 cut(s) 259, 1012, 1226, 1268, 1405, 1699
NlaIV GGNNCC 2 cut(s) 297, 723
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 1 cut(s) 1057
NsbI TGCGCA 1 cut(s) 809
NsiI ATGCAT 1 cut(s) 770
NspI RCATGY 1 cut(s) 1405
NspV TTCGAA 1 cut(s) 367
PagI TCATGA 1 cut(s) 1222
PceI AGGCCT 1 cut(s) 757
PdmI GAANNNNTTC 3 cut(s) 402, 714, 1230
PfeI GAWTC 6 cut(s) 64, 104, 282, 364, 1102, 1552
PflMI CCANNNNNTGG 1 cut(s) 312
PfoI TCCNGGA 1 cut(s) 637
PkrI GCNGC 5 cut(s) 55, 201, 210, 1087, 1686
Ppu21I YACGTR 1 cut(s) 1120
PsiI TTATAA 1 cut(s) 1484
Psp124BI GAGCTC 1 cut(s) 684
Psp1406I AACGTT 1 cut(s) 1068
Psp6I CCWGG 2 cut(s) 637, 674
PspFI CCCAGC 1 cut(s) 737
PspGI CCWGG 2 cut(s) 637, 674
PspN4I GGNNCC 2 cut(s) 297, 723
PspPI GGNCC 2 cut(s) 295, 647
PvuII CAGCTG 1 cut(s) 202
RsaI GTAC 1 cut(s) 1118
RsaNI GTAC 1 cut(s) 1117
RseI CAYNNNNRTG 1 cut(s) 500
SacI GAGCTC 1 cut(s) 684
SaqAI TTAA 7 cut(s) 417, 848, 1050, 1238, 1392, 1575, 1623
SatI GCNGC 5 cut(s) 54, 200, 209, 1086, 1685
Sau3AI GATC 3 cut(s) 241, 1276, 1579
Sau96I GGNCC 2 cut(s) 295, 647
ScrFI CCNGG 5 cut(s) 91, 639, 676, 840, 841
SduI GDGCHC 1 cut(s) 684
SfaNI GCATC 5 cut(s) 73, 163, 330, 615, 1600
SfuI TTCGAA 1 cut(s) 367
SinI GGWCC 1 cut(s) 295
SmaI CCCGGG 1 cut(s) 841
SmiMI CAYNNNNRTG 1 cut(s) 500
SmlI CTYRAG 1 cut(s) 189
SmoI CTYRAG 1 cut(s) 189
Sse9I AATT 6 cut(s) 421, 630, 713, 886, 1020, 1701
SseBI AGGCCT 1 cut(s) 757
SsiI CCGC 2 cut(s) 40, 410
SspMI CTAG 5 cut(s) 138, 1035, 1514, 1679, 1713
SstI GAGCTC 1 cut(s) 684
StuI AGGCCT 1 cut(s) 757
StyD4I CCNGG 5 cut(s) 89, 637, 674, 838, 839
StyI CCWWGG 2 cut(s) 117, 471
TaaI ACNGT 3 cut(s) 162, 356, 1063
TaiI ACGT 5 cut(s) 172, 575, 1071, 1122, 1389
TaqI TCGA 4 cut(s) 367, 1152, 1212, 1416
TasI AATT 6 cut(s) 421, 630, 713, 886, 1020, 1701
TfiI GAWTC 6 cut(s) 64, 104, 282, 364, 1102, 1552
Tru1I TTAA 7 cut(s) 417, 848, 1050, 1238, 1392, 1575, 1623
Tru9I TTAA 7 cut(s) 417, 848, 1050, 1238, 1392, 1575, 1623
TscAI CASTG 4 cut(s) 359, 380, 1066, 1260
TseFI GTSAC 1 cut(s) 1057
TseI GCWGC 5 cut(s) 53, 199, 208, 1085, 1684
Tsp45I GTSAC 1 cut(s) 1057
TspDTI ATGAA 8 cut(s) 141, 714, 800, 809, 890, 1211, 1239, 1253
TspGWI ACGGA 2 cut(s) 308, 1652
TspMI CCCGGG 1 cut(s) 839
TspRI CASTG 4 cut(s) 359, 380, 1066, 1260
Van91I CCANNNNNTGG 1 cut(s) 312
VpaK11BI GGWCC 1 cut(s) 295
XapI RAATTY 2 cut(s) 421, 1020
XbaI TCTAGA 2 cut(s) 1513, 1712
XceI RCATGY 1 cut(s) 1405
XmaI CCCGGG 1 cut(s) 839
XmiI GTMKAC 1 cut(s) 1159
XmnI GAANNNNTTC 3 cut(s) 402, 714, 1230
XspI CTAG 5 cut(s) 138, 1035, 1514, 1679, 1713
Zsp2I ATGCAT 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.