Rroxscaffold_1G00044430

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000083
Physical Location & Seq
Forward (+)
63401049 .. 63409961
8913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044430.1

Sequence Viewer

Length: 1479 bp
ATGATGCTCCTAGGTCATGCCCAGGATCAATCAGGCTTCATTAGCATAGACTGTGGCCTACAACAAAATTCAGGCTATACGGAAAGCACAACAACCATTAAATACATTCCAGACACAAATTTCATTGATACTGGTGAGCGCAAGACCATATCAAATGACTATATTAATGTATTTCAGCAGCAGTTTCATGTCGTTAGGATCTTCCCTGAAGGAACCAGGAACTGTTACAAAATAAACATTAATAGTGGGCAAAAATATTTGATACGAGCAAGCTTTGGGTATGGAAATTATGATGGCGAAAAAAATTTACCTGAATTCGAACTACATCTTGGAGCTAGTTTGTGGGATTCTGTTGTGTTCACTCGCGATCTTGAGGATTCTATCATAGTCAAGGAGCTCATACATATCTCTATGAGAAATTACATACATGTTTGTATGGTTGACATTAATAAAGGGGTTCCATTTATATCAACTATAGAACTCAGGCGTTTACGTGATGAAACTTATCAGACAAAAGTTGGGTTGTCTTTGGCACTTATTGAGCGAAATGACACTGGTCAAGTGTCAACGAATCAAATCGTATACAGGGCTGATTGGGATGAATTAAGTACTTCGTCTGTTATCGACATGGATCAAGCCGCTTACCAACTCCCATCTGATGTCATGAGTACCGCTGCCACGCCAACATATCCAAGCAGATATCTGAATTTTTCCTGGACGCCTCCCGTCGGTAAAAATGCATCATATTATGTTTATATGCACTTTGCAGAAGTTGAAGAGTTCAGCGCCACCCGGTCTAGAGAGCTCACTATTACCATGAATGGAAAGCTTATTTTTGAGCCATTTGATCCACCTTACTTGAGCACAAGAACGATTGACACTACGTTTGCTGCGGAAGGAGGAACGGATTTATCAAACAACAACTTATCCGGACAAATTCCTGAATATTTGTCGCAGTTGCCAAAGTTAACTGTCTTAAACTTGGAGAAAAATGAGCTCACAGGTTCAGTTCCTGCCGGGCTTATAGCAAAAGGAAAGGATGGTTTGTCATTGAGTTTGTGCGGAAATCCAAGTTTATTAAAGCAGGTTCCTTGCGAGAAGAAGAAGAATAAGTTTGCTGTTCCGGTCGTTGTGTCAATTATCGTAATGTTGTTGGTCTCATCCATTGCAGCAGCTATATTGTGGAAATTAAAAAAGGCTCATGCTGTTTGGAAGTACTGGAGGGTTGATAAGGGACATGATGTGTTTTTGAGTTTTAGAGGTGAGGATACACGCAAAGGCTTTGCACGTAATCTGTACGAAGCTTTAGAGGAAAAAGGAATCAAGACATTTTTTGATGATGAAACGCTCAAAGCGGGAGATGAAATAGCACTTGCACTTCTCGATGCAATAGAAGCATCAAAGATTTCGTTTTTTACAATGTGGATCCATCACACGTACGACATCAATCCGACAGTTTTTCCCTTAAGAAGTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

492

Amino Acids

55.43

Weight (kDa)

5.67

Isoelectric Point (pI)

32.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 16 - 295 1e-82 Malectin-like domain
TIR PF01582 413 - 471 5.1e-14 TIR domain
TIR_2 PF13676 415 - 469 2.1e-07 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1075
AccI GTMKAC 1 cut(s) 582
AccII CGCG 1 cut(s) 366
AccIII TCCGGA 1 cut(s) 929
AciI CCGC 5 cut(s) 639, 672, 893, 1062, 1355
AclWI GGATC 6 cut(s) 33, 206, 639, 842, 1420, 1433
AcsI RAATTY 6 cut(s) 67, 118, 304, 314, 706, 936
AcuI CTGAAG 1 cut(s) 228
AcyI GRCGYC 1 cut(s) 719
AfaI GTAC 5 cut(s) 610, 670, 1217, 1298, 1439
AfiI CCNNNNNNNGG 1 cut(s) 728
AflII CTTAAG 1 cut(s) 1465
AflIII ACRYGT 2 cut(s) 427, 1434
AgsI TTSAA 1 cut(s) 776
AjnI CCWGG 3 cut(s) 21, 215, 713
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
AluBI AGCT 8 cut(s) 273, 335, 397, 805, 829, 997, 1175, 1304
AluI AGCT 8 cut(s) 273, 335, 397, 805, 829, 997, 1175, 1304
Alw21I GWGCWC 4 cut(s) 399, 807, 866, 999
Alw26I GTCTC 1 cut(s) 1162
AlwI GGATC 6 cut(s) 33, 206, 639, 842, 1420, 1433
AlwNI CAGNNNCTG 2 cut(s) 222, 1013
Aor13HI TCCGGA 1 cut(s) 929
AoxI GGCC 1 cut(s) 55
ApeKI GCWGC 5 cut(s) 178, 674, 890, 1169, 1172
ApoI RAATTY 6 cut(s) 67, 118, 304, 314, 706, 936
ArsI GACNNNNNNTTYG 2 cut(s) 869, 901
AseI ATTAAT 3 cut(s) 165, 240, 447
AspA2I CCTAGG 1 cut(s) 10
AspLEI GCGC 2 cut(s) 141, 788
AsuC2I CCSGG 2 cut(s) 793, 1018
AsuHPI GGTGA 2 cut(s) 146, 1274
AsuII TTCGAA 1 cut(s) 318
AvrII CCTAGG 1 cut(s) 10
BamHI GGATCC 1 cut(s) 1425
BanII GRGCYC 3 cut(s) 399, 807, 999
Bbv12I GWGCWC 4 cut(s) 399, 807, 866, 999
BbvI GCAGC 5 cut(s) 190, 661, 877, 1181, 1184
BccI CCATC 4 cut(s) 287, 661, 1034, 1437
BciT130I CCWGG 3 cut(s) 23, 217, 715
BciVI GTATCC 1 cut(s) 1261
BcnI CCSGG 2 cut(s) 793, 1018
BcoDI GTCTC 1 cut(s) 1162
BfaI CTAG 3 cut(s) 11, 336, 798
BfmI CTRYAG 1 cut(s) 474
BfoI RGCGCY 1 cut(s) 789
BfrI CTTAAG 1 cut(s) 1465
BfuAI ACCTGC 1 cut(s) 1075
BfuI GTATCC 1 cut(s) 1261
BisI GCNGC 6 cut(s) 179, 639, 675, 891, 1170, 1173
BlnI CCTAGG 1 cut(s) 10
BlsI GCNGC 6 cut(s) 180, 640, 676, 892, 1171, 1174
BmcAI AGTACT 2 cut(s) 610, 1217
Bme1390I CCNGG 5 cut(s) 23, 217, 715, 793, 1018
BmiI GGNNCC 4 cut(s) 214, 459, 1089, 1427
BmrFI CCNGG 5 cut(s) 23, 217, 715, 793, 1018
BmsI GCATC 3 cut(s) 749, 1375, 1406
BoxI GACNNNNGTC 1 cut(s) 555
BpmI CTGGAG 1 cut(s) 1240
Bpu14I TTCGAA 1 cut(s) 318
BpuEI CTTGAG 2 cut(s) 392, 880
BpuMI CCSGG 2 cut(s) 793, 1018
BsaAI YACGTR 3 cut(s) 494, 1289, 1437
BsaHI GRCGYC 1 cut(s) 719
BsaI GGTCTC 1 cut(s) 1162
BsaJI CCNNGG 2 cut(s) 10, 21
BsaWI WCCGGW 2 cut(s) 929, 1123
Bsc4I CCNNNNNNNGG 1 cut(s) 728
Bse1I ACTGG 3 cut(s) 136, 559, 1223
Bse3DI GCAATG 1 cut(s) 1164
BseAI TCCGGA 1 cut(s) 929
BseBI CCWGG 3 cut(s) 23, 217, 715
BseDI CCNNGG 2 cut(s) 10, 21
BseGI GGATG 3 cut(s) 604, 1045, 1160
BseLI CCNNNNNNNGG 1 cut(s) 728
BseMI GCAATG 1 cut(s) 1164
BseMII CTCAG 1 cut(s) 496
BseNI ACTGG 3 cut(s) 136, 559, 1223
BseXI GCAGC 5 cut(s) 190, 661, 877, 1181, 1184
Bsh1236I CGCG 1 cut(s) 366
Bsh1285I CGRYCG 1 cut(s) 1128
BshFI GGCC 1 cut(s) 57
BsiEI CGRYCG 1 cut(s) 1128
BsiHKAI GWGCWC 4 cut(s) 399, 807, 866, 999
BsiSI CCGG 4 cut(s) 793, 930, 1017, 1124
BsiWI CGTACG 1 cut(s) 1437
BslFI GGGAC 1 cut(s) 1248
BslI CCNNNNNNNGG 1 cut(s) 728
BsmAI GTCTC 1 cut(s) 1162
BsmFI GGGAC 1 cut(s) 1248
BsnI GGCC 1 cut(s) 57
Bso31I GGTCTC 1 cut(s) 1162
Bsp119I TTCGAA 1 cut(s) 318
Bsp1286I GDGCHC 4 cut(s) 399, 807, 866, 999
Bsp13I TCCGGA 1 cut(s) 929
Bsp143I GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
Bsp68I TCGCGA 1 cut(s) 366
BspACI CCGC 5 cut(s) 639, 672, 893, 1062, 1355
BspANI GGCC 1 cut(s) 57
BspCNI CTCAG 1 cut(s) 495
BspEI TCCGGA 1 cut(s) 929
BspFNI CGCG 1 cut(s) 366
BspHI TCATGA 1 cut(s) 663
BspLI GGNNCC 4 cut(s) 214, 459, 1089, 1427
BspMI ACCTGC 1 cut(s) 1075
BspPI GGATC 6 cut(s) 33, 206, 639, 842, 1420, 1433
BspT104I TTCGAA 1 cut(s) 318
BspTI CTTAAG 1 cut(s) 1465
BspTNI GGTCTC 1 cut(s) 1162
BsrDI GCAATG 1 cut(s) 1164
BsrI ACTGG 3 cut(s) 136, 559, 1223
BssECI CCNNGG 2 cut(s) 10, 21
BssMI GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
BssNAI GTATAC 1 cut(s) 583
BssNI GRCGYC 1 cut(s) 719
BssT1I CCWWGG 1 cut(s) 10
Bst1107I GTATAC 1 cut(s) 583
Bst2UI CCWGG 3 cut(s) 23, 217, 715
Bst4CI ACNGT 4 cut(s) 53, 224, 973, 1456
Bst6I CTCTTC 1 cut(s) 771
BstACI GRCGYC 1 cut(s) 719
BstAFI CTTAAG 1 cut(s) 1465
BstBAI YACGTR 3 cut(s) 494, 1289, 1437
BstBI TTCGAA 1 cut(s) 318
BstC8I GCNNGC 1 cut(s) 271
BstDEI CTNAG 1 cut(s) 482
BstF5I GGATG 3 cut(s) 604, 1045, 1160
BstFNI CGCG 1 cut(s) 366
BstH2I RGCGCY 1 cut(s) 789
BstHHI GCGC 2 cut(s) 141, 788
BstKTI GATC 6 cut(s) 28, 201, 370, 634, 850, 1428
BstMAI GTCTC 1 cut(s) 1162
BstMBI GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
BstMCI CGRYCG 1 cut(s) 1128
BstMWI GCNNNNNNNGC 2 cut(s) 42, 1394
BstNI CCWGG 3 cut(s) 23, 217, 715
BstNSI RCATGY 1 cut(s) 431
BstPAI GACNNNNGTC 1 cut(s) 555
BstSCI CCNGG 5 cut(s) 21, 215, 713, 791, 1016
BstSFI CTRYAG 1 cut(s) 474
BstUI CGCG 1 cut(s) 366
BstV1I GCAGC 5 cut(s) 190, 661, 877, 1181, 1184
BstX2I RGATCY 2 cut(s) 198, 1425
BstYI RGATCY 2 cut(s) 198, 1425
BstZ17I GTATAC 1 cut(s) 583
BsuI GTATCC 1 cut(s) 1261
BsuRI GGCC 1 cut(s) 57
BtsCI GGATG 3 cut(s) 604, 1045, 1160
BtsIMutI CAGTG 1 cut(s) 552
BtuMI TCGCGA 1 cut(s) 366
BveI ACCTGC 1 cut(s) 1075
Cac8I GCNNGC 1 cut(s) 271
CaiI CAGNNNCTG 2 cut(s) 222, 1013
CciI TCATGA 1 cut(s) 663
CfoI GCGC 2 cut(s) 141, 788
CseI GACGC 1 cut(s) 727
Csp6I GTAC 5 cut(s) 609, 669, 1216, 1297, 1438
CspCI CAANNNNNGTGG 2 cut(s) 840, 875
CviAII CATG 8 cut(s) 17, 188, 428, 628, 664, 817, 1202, 1238
CviQI GTAC 5 cut(s) 609, 669, 1216, 1297, 1438
DdeI CTNAG 1 cut(s) 482
DpnI GATC 6 cut(s) 27, 200, 369, 633, 849, 1427
DpnII GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
Eam1104I CTCTTC 1 cut(s) 771
EarI CTCTTC 1 cut(s) 771
Ecl136II GAGCTC 3 cut(s) 397, 805, 997
Eco130I CCWWGG 1 cut(s) 10
Eco24I GRGCYC 3 cut(s) 399, 807, 999
Eco31I GGTCTC 1 cut(s) 1162
Eco32I GATATC 1 cut(s) 701
Eco53kI GAGCTC 3 cut(s) 397, 805, 997
Eco57I CTGAAG 1 cut(s) 228
EcoICRI GAGCTC 3 cut(s) 397, 805, 997
EcoRI GAATTC 1 cut(s) 314
EcoRII CCWGG 3 cut(s) 21, 215, 713
EcoRV GATATC 1 cut(s) 701
EcoT14I CCWWGG 1 cut(s) 10
EcoT22I ATGCAT 1 cut(s) 742
EcoT38I GRGCYC 3 cut(s) 399, 807, 999
ErhI CCWWGG 1 cut(s) 10
FaeI CATG 8 cut(s) 20, 191, 431, 631, 667, 820, 1205, 1241
FaqI GGGAC 1 cut(s) 1248
FatI CATG 8 cut(s) 16, 187, 427, 627, 663, 816, 1201, 1237
FauI CCCGC 1 cut(s) 1348
FblI GTMKAC 1 cut(s) 582
Fnu4HI GCNGC 6 cut(s) 179, 639, 675, 891, 1170, 1173
FokI GGATG 3 cut(s) 611, 1052, 1147
FriOI GRGCYC 3 cut(s) 399, 807, 999
Fsp4HI GCNGC 6 cut(s) 179, 639, 675, 891, 1170, 1173
FspBI CTAG 3 cut(s) 11, 336, 798
GlaI GCGC 2 cut(s) 140, 787
GluI GCNGC 6 cut(s) 179, 639, 675, 891, 1170, 1173
GsuI CTGGAG 1 cut(s) 1240
HaeII RGCGCY 1 cut(s) 789
HaeIII GGCC 1 cut(s) 57
HapII CCGG 4 cut(s) 793, 930, 1017, 1124
HgaI GACGC 1 cut(s) 727
HhaI GCGC 2 cut(s) 141, 788
Hin1I GRCGYC 1 cut(s) 719
Hin1II CATG 8 cut(s) 20, 191, 431, 631, 667, 820, 1205, 1241
Hin6I GCGC 2 cut(s) 139, 786
HinP1I GCGC 2 cut(s) 139, 786
HincII GTYRAC 3 cut(s) 442, 567, 969
HindII GTYRAC 3 cut(s) 442, 567, 969
HindIII AAGCTT 3 cut(s) 271, 827, 1302
HinfI GANTC 4 cut(s) 347, 377, 571, 1320
HpaI GTTAAC 1 cut(s) 969
HpaII CCGG 4 cut(s) 793, 930, 1017, 1124
HphI GGTGA 2 cut(s) 146, 1274
Hpy166II GTNNAC 6 cut(s) 360, 442, 491, 567, 583, 969
Hpy188I TCNGA 4 cut(s) 510, 658, 705, 1452
Hpy188III TCNNGA 9 cut(s) 110, 365, 371, 664, 798, 930, 941, 1324, 1382
Hpy8I GTNNAC 6 cut(s) 360, 442, 491, 567, 583, 969
Hpy99I CGWCG 1 cut(s) 731
HpyAV CCTTC 2 cut(s) 203, 890
HpyCH4III ACNGT 4 cut(s) 53, 224, 973, 1456
HpyCH4IV ACGT 4 cut(s) 493, 884, 1288, 1436
HpyCH4V TGCA 7 cut(s) 740, 760, 767, 1169, 1286, 1376, 1388
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 1394
HpyF3I CTNAG 1 cut(s) 482
HpySE526I ACGT 4 cut(s) 493, 884, 1288, 1436
Hsp92I GRCGYC 1 cut(s) 719
Hsp92II CATG 8 cut(s) 20, 191, 431, 631, 667, 820, 1205, 1241
HspAI GCGC 2 cut(s) 139, 786
Kpn2I TCCGGA 1 cut(s) 929
KspAI GTTAAC 1 cut(s) 969
Kzo9I GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
LmnI GCTCC 3 cut(s) 12, 332, 394
Lsp1109I GCAGC 5 cut(s) 190, 661, 877, 1181, 1184
LweI GCATC 3 cut(s) 749, 1375, 1406
MaeI CTAG 3 cut(s) 11, 336, 798
MaeII ACGT 4 cut(s) 493, 884, 1288, 1436
MaeIII GTNAC 1 cut(s) 224
MalI GATC 6 cut(s) 27, 200, 369, 633, 849, 1427
MboI GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
MboII GAAGA 5 cut(s) 193, 788, 1111, 1114, 1117
MflI RGATCY 2 cut(s) 198, 1425
MhlI GDGCHC 4 cut(s) 399, 807, 866, 999
MmeI TCCRAC 1 cut(s) 1475
MnlI CCTC 7 cut(s) 367, 732, 893, 1215, 1253, 1258, 1303
Mph1103I ATGCAT 1 cut(s) 742
MroI TCCGGA 1 cut(s) 929
MspA1I CMGCKG 1 cut(s) 674
MspCI CTTAAG 1 cut(s) 1465
MspI CCGG 4 cut(s) 793, 930, 1017, 1124
MspR9I CCNGG 5 cut(s) 23, 217, 715, 793, 1018
MvaI CCWGG 3 cut(s) 23, 217, 715
MvnI CGCG 1 cut(s) 366
MwoI GCNNNNNNNGC 2 cut(s) 42, 1394
NciI CCSGG 2 cut(s) 793, 1018
NdeII GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
NlaIII CATG 8 cut(s) 20, 191, 431, 631, 667, 820, 1205, 1241
NlaIV GGNNCC 4 cut(s) 214, 459, 1089, 1427
NruI TCGCGA 1 cut(s) 366
NsiI ATGCAT 1 cut(s) 742
NspI RCATGY 1 cut(s) 431
NspV TTCGAA 1 cut(s) 318
PagI TCATGA 1 cut(s) 663
PciI ACATGT 1 cut(s) 427
PfeI GAWTC 4 cut(s) 347, 377, 571, 1320
Pfl23II CGTACG 1 cut(s) 1437
PfoI TCCNGGA 1 cut(s) 713
PkrI GCNGC 6 cut(s) 180, 640, 676, 892, 1171, 1174
Ppu21I YACGTR 3 cut(s) 494, 1289, 1437
PscI ACATGT 1 cut(s) 427
PshAI GACNNNNGTC 1 cut(s) 555
PshBI ATTAAT 3 cut(s) 165, 240, 447
Psp124BI GAGCTC 3 cut(s) 399, 807, 999
Psp6I CCWGG 3 cut(s) 21, 215, 713
PspGI CCWGG 3 cut(s) 21, 215, 713
PspLI CGTACG 1 cut(s) 1437
PspN4I GGNNCC 4 cut(s) 214, 459, 1089, 1427
PstNI CAGNNNCTG 2 cut(s) 222, 1013
PsuI RGATCY 2 cut(s) 198, 1425
RruI TCGCGA 1 cut(s) 366
RsaI GTAC 5 cut(s) 610, 670, 1217, 1298, 1439
RsaNI GTAC 5 cut(s) 609, 669, 1216, 1297, 1438
SacI GAGCTC 3 cut(s) 399, 807, 999
SatI GCNGC 6 cut(s) 179, 639, 675, 891, 1170, 1173
Sau3AI GATC 6 cut(s) 25, 198, 367, 631, 847, 1425
ScaI AGTACT 2 cut(s) 610, 1217
ScrFI CCNGG 5 cut(s) 23, 217, 715, 793, 1018
SduI GDGCHC 4 cut(s) 399, 807, 866, 999
SfaNI GCATC 3 cut(s) 749, 1375, 1406
SfcI CTRYAG 1 cut(s) 474
SfuI TTCGAA 1 cut(s) 318
SmlI CTYRAG 3 cut(s) 371, 859, 1465
SmoI CTYRAG 3 cut(s) 371, 859, 1465
SsiI CCGC 5 cut(s) 639, 672, 893, 1062, 1355
SspI AATATT 2 cut(s) 257, 947
SspMI CTAG 3 cut(s) 11, 336, 798
SstI GAGCTC 3 cut(s) 399, 807, 999
StyD4I CCNGG 5 cut(s) 21, 215, 713, 791, 1016
StyI CCWWGG 1 cut(s) 10
TaaI ACNGT 4 cut(s) 53, 224, 973, 1456
TaiI ACGT 4 cut(s) 496, 887, 1291, 1439
TaqI TCGA 3 cut(s) 318, 624, 1383
TatI WGTACW 2 cut(s) 608, 1215
TauI GCSGC 1 cut(s) 641
TfiI GAWTC 4 cut(s) 347, 377, 571, 1320
TscAI CASTG 1 cut(s) 559
TseI GCWGC 5 cut(s) 178, 674, 890, 1169, 1172
TspDTI ATGAA 8 cut(s) 28, 112, 176, 513, 615, 833, 1356, 1377
TspGWI ACGGA 2 cut(s) 95, 920
TspRI CASTG 1 cut(s) 559
Vha464I CTTAAG 1 cut(s) 1465
VspI ATTAAT 3 cut(s) 165, 240, 447
XapI RAATTY 6 cut(s) 67, 118, 304, 314, 706, 936
XbaI TCTAGA 1 cut(s) 797
XceI RCATGY 1 cut(s) 431
XmaJI CCTAGG 1 cut(s) 10
XmiI GTMKAC 1 cut(s) 582
XspI CTAG 3 cut(s) 11, 336, 798
ZrmI AGTACT 2 cut(s) 610, 1217
Zsp2I ATGCAT 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.