Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0000083

Physical Location & Seq

Genomic Coordinates Forward (+)

18780544 .. 18783656

Gene Structure 3113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24291.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGGTGTGAGTCCTCTTTTACTCACGATCCTCATCACCCTCTCTTTCTTTTTATCAGAAACAGAGTCAACATCGTTCGAGATAGTCAACAACTGCAACTACACAGTCTGGCCCGCAGTTATCTCCTCCGGCACAGTAAACCTGTCGTCGCTGTCGACCACCGGCTTCACGCTCAAGAGCGGCGCGTCCTTCAACCTCTCCGTCCCCAACTCATGGCAGGGTAGGGTGTGGGGCCGGACACTCTGCAACGAATCCTCCACCGGAAACTTCTCCTGTTTCACCGCCGATTGCGGCACCGGAAAAGTCGAGTGCGGCGGAAATGGCTCCAAACCGCCAGCTACGTTCGCCGAGTTCTTAATCAACAGCACCGGCATGGACATCTATGATGTTACCCTGGTCGACGGGTTCAATCTCCCAATGGTGGTGGAGCCCCTTGGTGGCAGCAACTGCAAATCTTCGGGATGCTCGGCCGACTTGAACGGCGCGTGTCCCAAGGAGCTGAGGGTGGCGCGTGAGGGGAGCCAAGGGACCGTGGCGTGCATGACGCCGTGCACGGCGTTCAATAATGATCTGTTTTGTTGTACCGGGCAGTATAATACACCCGAGACGTGTGCTGGGACCGTATATACCGATTATTTCAAACAAAGATGCCCGAAAGCGTATACCTACTCGTATGATGACAACCAGACTACGTACACATGTGTGTCAGCTAACTACAGCATTGTTTTCTGCCCGATCAGTTTGGACCAAACACCAGCTGAAACACCAGCAGCCAAAGAACCAACTGTACCCGAACAGGTTCCTTCGAAAAGTAAAAGACACAAAATCATCATTGCCTCTGTAGCGTCAAGTGCTGGGATTATTATCTTCATATTAGCGGTATTAGCGGGACTATGGAGCACTAAAAGGAAGAAGAGACAACAAGAGATCCAAAATAGTTCATTGGAGTTGGACGATGGTCGACGCTTCATGTACTCGGAGCTTGTAAAGATTACCAATAATTTTGCATCGCCAATTGGAGCAGGTGGATTTGGAAAAGTCTATCATGGTATTCTGGAAAATGATATGCAAGTTGCCGTCAAGTTACTTATTTCCGCATCAGGCTCCAGTGAATTTCAAAATGAGGTTAAGCTATTGATGAGAGCTCATCATAGAAATGTGGTTTCCTTCACTGGCTACTGCTATGATGGAAAGACTATGGCACTTGTATTTGAATATGTTGCCAATGGAAATTTACAACAACATTTAACAGCTTCAGATGTAGATACAGGAAACATTTTGACTTGGAAGGAGAGACTTCAAATCGCAGTGGATGCAGCACAAGGACTGGATTATCTACATAATGGTTGCAAGCCTCCCATAATCCACAGAGATATAAAGACCTCCAATATATTGTTAACTGAAAAGATGCAAGCCAAGATATGTGATTTTGGTGTTTCCAAACTTCTTTCAACTGAAACTGCTACTCATACCATGACAGATCACGTCAGAGGAACTCGAGGATACTTTGATCCTGAATACTACACCACAGGAAAGCTGAACAAAAAGAGTGATATATACAGCTTTGGTATTGTGTTGCTAGAGCTAATCACCGGCAGAACAGCAATAATAACAGATGTAGAACCCGAACCTGTTCACATATGTCAATGGGTGAGGCCTATGTTTCAGAGAAGAGATATTGAAAGTATATTCGATTCAAGGATACAAGCAGGGACTTACAACGTTACCTCTGCTTGGAAGGCGGTAGAAATCGCCATGGAATGTGTGTCATCAACAGCTATCGAAAGACCAGATATCAATGTTGTGTATAAGGAACTGAAGGAATGTTTGAAAATTGAGGTTCCACCTGAAATAGCAAAGGTTCCAGAGGTTGATGATGAGAGTGATGATTGCAGTACTAGTTCAAGTGTCCCTGTTCTCATGACGTCCCACACTCGGTCTGAAAGCTTCTTAGTTCATATGAAGTCACACATTGAGTCTGAAACTGAAAGGCATACGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Thaumatin

Protein Analysis

668

Amino Acids

73.23

Weight (kDa)

5.56

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thaumatin	PF00314	30 - 245	1.6e-71	Thaumatin family
PK_Tyr_Ser-Thr	PF07714	336 - 551	1.3e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	337 - 537	4e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca	FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica	MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica	Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis	pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis	RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata	RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora	Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii	Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa	Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha	Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana	Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1013
AatII	GACGTC	1 cut(s)	1928
Acc36I	ACCTGC	1 cut(s)	1013
AccB1I	GGYRCC	1 cut(s)	293
AccB7I	CCANNNNNTGG	1 cut(s)	213
AccBSI	CCGCTC	1 cut(s)	180
AccI	GTMKAC	4 cut(s)	155, 399, 662, 961
AccII	CGCG	3 cut(s)	185, 485, 511
AclI	AACGTT	1 cut(s)	1722
AclWI	GGATC	3 cut(s)	22, 922, 1505
AcoI	YGGCCR	1 cut(s)	468
AcsI	RAATTY	2 cut(s)	1112, 1231
AcuI	CTGAAG	2 cut(s)	1239, 1838
AcyI	GRCGYC	2 cut(s)	545, 1925
AfaI	GTAC	5 cut(s)	583, 695, 789, 974, 1897
AfiI	CCNNNNNNNGG	5 cut(s)	213, 421, 437, 1734, 1935
AflIII	ACRYGT	3 cut(s)	608, 698, 1997
AhlI	ACTAGT	1 cut(s)	1898
AjiI	CACGTC	2 cut(s)	609, 1486
AjnI	CCWGG	1 cut(s)	393
AleI	CACNNNNGTG	1 cut(s)	701
Alw21I	GWGCWC	3 cut(s)	554, 902, 1147
Alw26I	GTCTC	3 cut(s)	599, 910, 1288
Alw44I	GTGCAC	1 cut(s)	550
AlwI	GGATC	3 cut(s)	22, 922, 1505
AlwNI	CAGNNNCTG	1 cut(s)	447
Ama87I	CYCGRG	2 cut(s)	602, 1497
AoxI	GGCC	4 cut(s)	110, 232, 468, 1655
ApaLI	GTGCAC	1 cut(s)	550
ApeKI	GCWGC	3 cut(s)	441, 770, 1316
ApoI	RAATTY	2 cut(s)	1112, 1231
Asp700I	GAANNNNTTC	2 cut(s)	798, 1632
AspLEI	GCGC	3 cut(s)	185, 485, 511
AspS9I	GGNCC	5 cut(s)	111, 232, 528, 618, 745
AsuC2I	CCSGG	1 cut(s)	586
AsuHPI	GGTGA	4 cut(s)	28, 271, 1582, 1663
AsuII	TTCGAA	1 cut(s)	806
AvaI	CYCGRG	2 cut(s)	602, 1497
AvaII	GGWCC	3 cut(s)	528, 618, 745
BaeGI	GKGCMC	1 cut(s)	554
BanI	GGYRCC	1 cut(s)	293
BanII	GRGCYC	2 cut(s)	432, 1147
Bbv12I	GWGCWC	3 cut(s)	554, 902, 1147
BbvCI	CCTCAGC	1 cut(s)	500
BbvI	GCAGC	3 cut(s)	453, 782, 1328
BccI	CCATC	2 cut(s)	950, 1181
BceAI	ACGGC	4 cut(s)	496, 532, 570, 1061
BcgI	CGANNNNNNTGC	2 cut(s)	593, 627
BciT130I	CCWGG	1 cut(s)	395
BciVI	GTATCC	2 cut(s)	1496, 1695
BcnI	CCSGG	1 cut(s)	586
BcoDI	GTCTC	3 cut(s)	599, 910, 1288
BcuI	ACTAGT	1 cut(s)	1898
BfaI	CTAG	2 cut(s)	1580, 1899
BfmI	CTRYAG	2 cut(s)	715, 840
BfuAI	ACCTGC	1 cut(s)	1013
BfuI	GTATCC	2 cut(s)	1496, 1695
BisI	GCNGC	6 cut(s)	181, 292, 313, 442, 771, 1317
BlsI	GCNGC	6 cut(s)	182, 293, 314, 443, 772, 1318
BmcAI	AGTACT	1 cut(s)	1897
Bme1390I	CCNGG	2 cut(s)	395, 586
Bme18I	GGWCC	3 cut(s)	528, 618, 745
BmeT110I	CYCGRG	2 cut(s)	602, 1497
BmgBI	CACGTC	2 cut(s)	609, 1486
BmgT120I	GGNCC	5 cut(s)	111, 232, 528, 618, 745
BmrFI	CCNGG	2 cut(s)	395, 586
BmsI	GCATC	6 cut(s)	452, 638, 1016, 1106, 1303, 1398
BoxI	GACNNNNGTC	1 cut(s)	957
BpmI	CTGGAG	1 cut(s)	1090
Bpu10I	CCTNAGC	1 cut(s)	500
Bpu14I	TTCGAA	1 cut(s)	806
BpuEI	CTTGAG	1 cut(s)	158
BpuMI	CCSGG	1 cut(s)	586
BsaAI	YACGTR	2 cut(s)	693, 1998
BsaBI	GATNNNNATC	2 cut(s)	32, 863
BsaHI	GRCGYC	2 cut(s)	545, 1925
BsaJI	CCNNGG	6 cut(s)	393, 433, 492, 523, 531, 1755
BsaWI	WCCGGW	2 cut(s)	260, 296
BsaXI	ACNNNNNCTCC	2 cut(s)	239, 269
Bsc4I	CCNNNNNNNGG	5 cut(s)	213, 421, 437, 1734, 1935
Bse118I	RCCGGY	3 cut(s)	161, 368, 1592
Bse1I	ACTGG	3 cut(s)	1107, 1177, 1332
Bse3DI	GCAATG	1 cut(s)	831
Bse8I	GATNNNNATC	2 cut(s)	32, 863
BseBI	CCWGG	1 cut(s)	395
BseDI	CCNNGG	6 cut(s)	393, 433, 492, 523, 531, 1755
BseGI	GGATG	2 cut(s)	467, 1318
BseJI	GATNNNNATC	2 cut(s)	32, 863
BseLI	CCNNNNNNNGG	5 cut(s)	213, 421, 437, 1734, 1935
BseMI	GCAATG	1 cut(s)	831
BseMII	CTCAG	1 cut(s)	491
BseNI	ACTGG	3 cut(s)	1107, 1177, 1332
BseRI	GAGGAG	1 cut(s)	115
BseSI	GKGCMC	1 cut(s)	554
BseX3I	CGGCCG	1 cut(s)	468
BseXI	GCAGC	3 cut(s)	453, 782, 1328
BseYI	CCCAGC	2 cut(s)	614, 854
Bsh1236I	CGCG	3 cut(s)	185, 485, 511
Bsh1285I	CGRYCG	1 cut(s)	471
BshFI	GGCC	4 cut(s)	112, 234, 470, 1657
BshNI	GGYRCC	1 cut(s)	293
BsiEI	CGRYCG	1 cut(s)	471
BsiHKAI	GWGCWC	3 cut(s)	554, 902, 1147
BsiHKCI	CYCGRG	2 cut(s)	602, 1497
BsiSI	CCGG	8 cut(s)	129, 162, 235, 261, 297, 369, 585, 1593
BslFI	GGGAC	8 cut(s)	188, 474, 541, 631, 903, 1726, 1895, 1912
BslI	CCNNNNNNNGG	5 cut(s)	213, 421, 437, 1734, 1935
BsmAI	GTCTC	3 cut(s)	599, 910, 1288
BsmBI	CGTCTC	1 cut(s)	599
BsmFI	GGGAC	8 cut(s)	188, 474, 541, 631, 903, 1726, 1895, 1912
BsnI	GGCC	4 cut(s)	112, 234, 470, 1657
BsoBI	CYCGRG	2 cut(s)	602, 1497
Bsp119I	TTCGAA	1 cut(s)	806
Bsp1286I	GDGCHC	4 cut(s)	432, 554, 902, 1147
Bsp143I	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
Bsp19I	CCATGG	1 cut(s)	1755
BspANI	GGCC	4 cut(s)	112, 234, 470, 1657
BspCNI	CTCAG	1 cut(s)	492
BspFNI	CGCG	3 cut(s)	185, 485, 511
BspHI	TCATGA	1 cut(s)	1920
BspMI	ACCTGC	1 cut(s)	1013
BspPI	GGATC	3 cut(s)	22, 922, 1505
BspT104I	TTCGAA	1 cut(s)	806
BspT107I	GGYRCC	1 cut(s)	293
BsrBI	CCGCTC	1 cut(s)	180
BsrDI	GCAATG	1 cut(s)	831
BsrFI	RCCGGY	3 cut(s)	161, 368, 1592
BsrI	ACTGG	3 cut(s)	1107, 1177, 1332
BssAI	RCCGGY	3 cut(s)	161, 368, 1592
BssECI	CCNNGG	6 cut(s)	393, 433, 492, 523, 531, 1755
BssMI	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
BssNAI	GTATAC	1 cut(s)	663
BssNI	GRCGYC	2 cut(s)	545, 1925
BssT1I	CCWWGG	4 cut(s)	433, 492, 523, 1755
Bst1107I	GTATAC	1 cut(s)	663
Bst2UI	CCWGG	1 cut(s)	395
Bst4CI	ACNGT	5 cut(s)	106, 136, 532, 622, 787
Bst6I	CTCTTC	2 cut(s)	908, 1666
BstACI	GRCGYC	2 cut(s)	545, 1925
BstAPI	GCANNNNNTGC	2 cut(s)	447, 1313
BstBAI	YACGTR	2 cut(s)	693, 1998
BstBI	TTCGAA	1 cut(s)	806
BstC8I	GCNNGC	5 cut(s)	114, 336, 538, 1352, 1413
BstDEI	CTNAG	2 cut(s)	500, 1951
BstDSI	CCRYGG	2 cut(s)	531, 1755
BstF5I	GGATG	2 cut(s)	467, 1318
BstFNI	CGCG	3 cut(s)	185, 485, 511
BstHHI	GCGC	3 cut(s)	185, 485, 511
BstKTI	GATC	6 cut(s)	30, 571, 738, 930, 1483, 1513
BstMAI	GTCTC	3 cut(s)	599, 910, 1288
BstMBI	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
BstMCI	CGRYCG	1 cut(s)	471
BstMWI	GCNNNNNNNGC	8 cut(s)	321, 344, 447, 842, 851, 884, 1313, 1739
BstNI	CCWGG	1 cut(s)	395
BstNSI	RCATGY	1 cut(s)	702
BstPAI	GACNNNNGTC	1 cut(s)	957
BstSCI	CCNGG	2 cut(s)	393, 584
BstSFI	CTRYAG	2 cut(s)	715, 840
BstSLI	GKGCMC	1 cut(s)	554
BstSNI	TACGTA	1 cut(s)	693
BstUI	CGCG	3 cut(s)	185, 485, 511
BstV1I	GCAGC	3 cut(s)	453, 782, 1328
BstX2I	RGATCY	1 cut(s)	927
BstYI	RGATCY	1 cut(s)	927
BstZ17I	GTATAC	1 cut(s)	663
BstZI	CGGCCG	1 cut(s)	468
BsuI	GTATCC	2 cut(s)	1496, 1695
BsuRI	GGCC	4 cut(s)	112, 234, 470, 1657
BtgI	CCRYGG	2 cut(s)	531, 1755
BtgZI	GCGATG	1 cut(s)	993
BtrI	CACGTC	2 cut(s)	609, 1486
BtsCI	GGATG	2 cut(s)	467, 1318
BtsI	GCAGTG	1 cut(s)	1314
BtsIMutI	CAGTG	3 cut(s)	1114, 1170, 1314
BveI	ACCTGC	1 cut(s)	1013
Cac8I	GCNNGC	5 cut(s)	114, 336, 538, 1352, 1413
CaiI	CAGNNNCTG	1 cut(s)	447
CciI	TCATGA	1 cut(s)	1920
CfoI	GCGC	3 cut(s)	185, 485, 511
Cfr10I	RCCGGY	3 cut(s)	161, 368, 1592
Cfr13I	GGNCC	5 cut(s)	111, 232, 528, 618, 745
CseI	GACGC	4 cut(s)	174, 553, 834, 972
Csp6I	GTAC	5 cut(s)	582, 694, 788, 973, 1896
CspCI	CAANNNNNGTGG	2 cut(s)	405, 440
CviAII	CATG	9 cut(s)	213, 373, 541, 699, 970, 1046, 1474, 1756, 1921
CviQI	GTAC	5 cut(s)	582, 694, 788, 973, 1896
DdeI	CTNAG	2 cut(s)	500, 1951
DpnI	GATC	6 cut(s)	29, 570, 737, 929, 1482, 1512
DpnII	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
EaeI	YGGCCR	1 cut(s)	468
EagI	CGGCCG	1 cut(s)	468
Eam1104I	CTCTTC	2 cut(s)	908, 1666
EarI	CTCTTC	2 cut(s)	908, 1666
EciI	GGCGGA	1 cut(s)	330
Ecl136II	GAGCTC	1 cut(s)	1145
EclXI	CGGCCG	1 cut(s)	468
Eco105I	TACGTA	1 cut(s)	693
Eco130I	CCWWGG	4 cut(s)	433, 492, 523, 1755
Eco147I	AGGCCT	1 cut(s)	1657
Eco24I	GRGCYC	2 cut(s)	432, 1147
Eco32I	GATATC	1 cut(s)	1795
Eco47I	GGWCC	3 cut(s)	528, 618, 745
Eco52I	CGGCCG	1 cut(s)	468
Eco53kI	GAGCTC	1 cut(s)	1145
Eco57I	CTGAAG	2 cut(s)	1239, 1838
Eco88I	CYCGRG	2 cut(s)	602, 1497
EcoICRI	GAGCTC	1 cut(s)	1145
EcoRII	CCWGG	1 cut(s)	393
EcoRV	GATATC	1 cut(s)	1795
EcoT14I	CCWWGG	4 cut(s)	433, 492, 523, 1755
EcoT38I	GRGCYC	2 cut(s)	432, 1147
ErhI	CCWWGG	4 cut(s)	433, 492, 523, 1755
Esp3I	CGTCTC	1 cut(s)	599
FaeI	CATG	9 cut(s)	216, 376, 544, 702, 973, 1049, 1477, 1759, 1924
FaqI	GGGAC	8 cut(s)	188, 474, 541, 631, 903, 1726, 1895, 1912
FatI	CATG	9 cut(s)	212, 372, 540, 698, 969, 1045, 1473, 1755, 1920
FauI	CCCGC	2 cut(s)	121, 880
FauNDI	CATATG	2 cut(s)	1640, 1959
FblI	GTMKAC	4 cut(s)	155, 399, 662, 961
Fnu4HI	GCNGC	6 cut(s)	181, 292, 313, 442, 771, 1317
FokI	GGATG	2 cut(s)	474, 1325
FriOI	GRGCYC	2 cut(s)	432, 1147
Fsp4HI	GCNGC	6 cut(s)	181, 292, 313, 442, 771, 1317
FspBI	CTAG	2 cut(s)	1580, 1899
GlaI	GCGC	3 cut(s)	184, 484, 510
GluI	GCNGC	6 cut(s)	181, 292, 313, 442, 771, 1317
GsaI	CCCAGC	2 cut(s)	618, 858
GsuI	CTGGAG	1 cut(s)	1090
HaeIII	GGCC	4 cut(s)	112, 234, 470, 1657
HapII	CCGG	8 cut(s)	129, 162, 235, 261, 297, 369, 585, 1593
HgaI	GACGC	4 cut(s)	174, 553, 834, 972
HhaI	GCGC	3 cut(s)	185, 485, 511
Hin1I	GRCGYC	2 cut(s)	545, 1925
Hin1II	CATG	9 cut(s)	216, 376, 544, 702, 973, 1049, 1477, 1759, 1924
Hin6I	GCGC	3 cut(s)	183, 483, 509
HinP1I	GCGC	3 cut(s)	183, 483, 509
HincII	GTYRAC	6 cut(s)	69, 88, 156, 400, 962, 1398
HindII	GTYRAC	6 cut(s)	69, 88, 156, 400, 962, 1398
HindIII	AAGCTT	1 cut(s)	1945
HinfI	GANTC	5 cut(s)	10, 65, 251, 1694, 1976
HpaI	GTTAAC	1 cut(s)	1398
HpaII	CCGG	8 cut(s)	129, 162, 235, 261, 297, 369, 585, 1593
HphI	GGTGA	4 cut(s)	28, 271, 1582, 1663
Hpy188I	TCNGA	7 cut(s)	58, 979, 1258, 1490, 1668, 1942, 1981
Hpy188III	TCNNGA	8 cut(s)	25, 79, 175, 459, 1055, 1514, 1865, 1921
Hpy99I	CGWCG	3 cut(s)	151, 404, 966
HpyAV	CCTTC	6 cut(s)	199, 813, 1177, 1282, 1732, 1813
HpyCH4III	ACNGT	5 cut(s)	106, 136, 532, 622, 787
HpyCH4IV	ACGT	7 cut(s)	341, 608, 692, 1485, 1722, 1925, 1997
HpyF10VI	GCNNNNNNNGC	8 cut(s)	321, 344, 447, 842, 851, 884, 1313, 1739
HpyF3I	CTNAG	2 cut(s)	500, 1951
HpySE526I	ACGT	7 cut(s)	341, 608, 692, 1485, 1722, 1925, 1997
Hsp92I	GRCGYC	2 cut(s)	545, 1925
Hsp92II	CATG	9 cut(s)	216, 376, 544, 702, 973, 1049, 1477, 1759, 1924
HspAI	GCGC	3 cut(s)	183, 483, 509
KspAI	GTTAAC	1 cut(s)	1398
Kzo9I	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
LmnI	GCTCC	8 cut(s)	329, 427, 496, 519, 897, 979, 1019, 1109
Lsp1109I	GCAGC	3 cut(s)	453, 782, 1328
LweI	GCATC	6 cut(s)	452, 638, 1016, 1106, 1303, 1398
MaeI	CTAG	2 cut(s)	1580, 1899
MaeII	ACGT	7 cut(s)	341, 608, 692, 1485, 1722, 1925, 1997
MaeIII	GTNAC	4 cut(s)	388, 1083, 1723, 1965
MalI	GATC	6 cut(s)	29, 570, 737, 929, 1482, 1512
MbiI	CCGCTC	1 cut(s)	180
MboI	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
MboII	GAAGA	5 cut(s)	447, 859, 922, 925, 1683
MfeI	CAATTG	1 cut(s)	1014
MflI	RGATCY	1 cut(s)	927
MhlI	GDGCHC	4 cut(s)	432, 554, 902, 1147
MluCI	AATT	5 cut(s)	1000, 1014, 1112, 1231, 1833
MlyI	GAGTC	3 cut(s)	19, 74, 1985
MmeI	TCCRAC	1 cut(s)	930
MroXI	GAANNNNTTC	2 cut(s)	798, 1632
MseI	TTAA	4 cut(s)	356, 1128, 1247, 1397
MslI	CAYNNNNRTG	3 cut(s)	371, 701, 1155
MspA1I	CMGCKG	1 cut(s)	758
MspI	CCGG	8 cut(s)	129, 162, 235, 261, 297, 369, 585, 1593
MspR9I	CCNGG	2 cut(s)	395, 586
MunI	CAATTG	1 cut(s)	1014
MvaI	CCWGG	1 cut(s)	395
MvnI	CGCG	3 cut(s)	185, 485, 511
MwoI	GCNNNNNNNGC	8 cut(s)	321, 344, 447, 842, 851, 884, 1313, 1739
NciI	CCSGG	1 cut(s)	586
NcoI	CCATGG	1 cut(s)	1755
NdeI	CATATG	2 cut(s)	1640, 1959
NdeII	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
NlaIII	CATG	9 cut(s)	216, 376, 544, 702, 973, 1049, 1477, 1759, 1924
NmeAIII	GCCGAG	2 cut(s)	373, 446
NmuCI	GTSAC	1 cut(s)	1965
NspI	RCATGY	1 cut(s)	702
NspV	TTCGAA	1 cut(s)	806
OliI	CACNNNNGTG	1 cut(s)	701
PaeR7I	CTCGAG	1 cut(s)	1497
PagI	TCATGA	1 cut(s)	1920
PaqCI	CACCTGC	1 cut(s)	1013
PceI	AGGCCT	1 cut(s)	1657
PciI	ACATGT	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	1 cut(s)	152
PdmI	GAANNNNTTC	2 cut(s)	798, 1632
PfeI	GAWTC	2 cut(s)	251, 1694
PflMI	CCANNNNNTGG	1 cut(s)	213
PkrI	GCNGC	6 cut(s)	182, 293, 314, 443, 772, 1318
PleI	GAGTC	3 cut(s)	18, 73, 1984
PpsI	GAGTC	3 cut(s)	18, 73, 1984
Ppu21I	YACGTR	2 cut(s)	693, 1998
PscI	ACATGT	1 cut(s)	698
PshAI	GACNNNNGTC	1 cut(s)	957
Psp124BI	GAGCTC	1 cut(s)	1147
Psp1406I	AACGTT	1 cut(s)	1722
Psp6I	CCWGG	1 cut(s)	393
PspFI	CCCAGC	2 cut(s)	614, 854
PspGI	CCWGG	1 cut(s)	393
PspPI	GGNCC	5 cut(s)	111, 232, 528, 618, 745
PspXI	VCTCGAGB	1 cut(s)	1497
PsrI	GAACNNNNNNTAC	2 cut(s)	771, 803
PstNI	CAGNNNCTG	1 cut(s)	447
PsuI	RGATCY	1 cut(s)	927
PvuII	CAGCTG	1 cut(s)	758
RsaI	GTAC	5 cut(s)	583, 695, 789, 974, 1897
RsaNI	GTAC	5 cut(s)	582, 694, 788, 973, 1896
RseI	CAYNNNNRTG	3 cut(s)	371, 701, 1155
SacI	GAGCTC	1 cut(s)	1147
SalI	GTCGAC	3 cut(s)	154, 398, 960
SaqAI	TTAA	4 cut(s)	356, 1128, 1247, 1397
SatI	GCNGC	6 cut(s)	181, 292, 313, 442, 771, 1317
Sau3AI	GATC	6 cut(s)	27, 568, 735, 927, 1480, 1510
Sau96I	GGNCC	5 cut(s)	111, 232, 528, 618, 745
ScaI	AGTACT	1 cut(s)	1897
SchI	GAGTC	3 cut(s)	19, 74, 1985
ScrFI	CCNGG	2 cut(s)	395, 586
SduI	GDGCHC	4 cut(s)	432, 554, 902, 1147
SfaNI	GCATC	6 cut(s)	452, 638, 1016, 1106, 1303, 1398
SfcI	CTRYAG	2 cut(s)	715, 840
Sfr274I	CTCGAG	1 cut(s)	1497
SfuI	TTCGAA	1 cut(s)	806
SinI	GGWCC	3 cut(s)	528, 618, 745
SlaI	CTCGAG	1 cut(s)	1497
SmiMI	CAYNNNNRTG	3 cut(s)	371, 701, 1155
SmlI	CTYRAG	2 cut(s)	173, 1497
SmoI	CTYRAG	2 cut(s)	173, 1497
SnaBI	TACGTA	1 cut(s)	693
SpeI	ACTAGT	1 cut(s)	1898
Sse9I	AATT	5 cut(s)	1000, 1014, 1112, 1231, 1833
SseBI	AGGCCT	1 cut(s)	1657
SspMI	CTAG	2 cut(s)	1580, 1899
SstI	GAGCTC	1 cut(s)	1147
StuI	AGGCCT	1 cut(s)	1657
StyD4I	CCNGG	2 cut(s)	393, 584
StyI	CCWWGG	4 cut(s)	433, 492, 523, 1755
TaaI	ACNGT	5 cut(s)	106, 136, 532, 622, 787
TaiI	ACGT	7 cut(s)	344, 611, 695, 1488, 1725, 1928, 2000
TaqI	TCGA	9 cut(s)	78, 155, 306, 399, 806, 961, 1498, 1692, 1782
TaqII	GACCGA	1 cut(s)	1926
TasI	AATT	5 cut(s)	1000, 1014, 1112, 1231, 1833
TatI	WGTACW	2 cut(s)	972, 1895
TauI	GCSGC	3 cut(s)	183, 294, 315
TfiI	GAWTC	2 cut(s)	251, 1694
Tru1I	TTAA	4 cut(s)	356, 1128, 1247, 1397
Tru9I	TTAA	4 cut(s)	356, 1128, 1247, 1397
TscAI	CASTG	3 cut(s)	1114, 1177, 1314
TseFI	GTSAC	1 cut(s)	1965
TseI	GCWGC	3 cut(s)	441, 770, 1316
Tsp45I	GTSAC	1 cut(s)	1965
TspDTI	ATGAA	5 cut(s)	859, 930, 958, 1946, 1976
TspGWI	ACGGA	1 cut(s)	190
TspRI	CASTG	3 cut(s)	1114, 1177, 1314
Van91I	CCANNNNNTGG	1 cut(s)	213
VneI	GTGCAC	1 cut(s)	550
VpaK11BI	GGWCC	3 cut(s)	528, 618, 745
XapI	RAATTY	2 cut(s)	1112, 1231
XceI	RCATGY	1 cut(s)	702
XhoI	CTCGAG	1 cut(s)	1497
XmiI	GTMKAC	4 cut(s)	155, 399, 662, 961
XmnI	GAANNNNTTC	2 cut(s)	798, 1632
XspI	CTAG	2 cut(s)	1580, 1899
ZraI	GACGTC	1 cut(s)	1926
ZrmI	AGTACT	1 cut(s)	1897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.