Rh7DG133300

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
11244747 .. 11250671
5925 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG133300.1

Sequence Viewer

Length: 747 bp
ATGGATTTAGATGACAGTTCCACTACTTTGGGTTGGGAAGACAGACTTCGAATAGCAGTAGACGATGCACAAGGATTGGAGTATCTGCATTTAATTCACAGGGATGTGAAATCAGCAAACATCTTGCTGACTGAAAACTTCCCAGCCAAAGTATTTGATTTTGGCCTATCCAGAAATTTCCCTACAGACCTTGTGACTCATATAACAACTGGCGTTGCTGGTACTCCTGGGTACCTTGACCCTGAGTACTACCTAACAAGCAGGTTAAATGATAAAAGTGATGTTTATAGCTTTGGGATTGTGCTGTTGGAAATTATCACAAACCGACCTGTTATATCAGAAACTGTAGAGAGAATTCACATTAGTCAATGGGTTGCTTCCATCCTTGTGCAAGGAGACATTTACAGTATTGTTGATCCAAGATTAGAGAGAATTAGCAGCTACCTTTATTATAGATTTGTGTCCTCGCACACCAGCGCAGCCTCTCCTAAATTGGGCACAAGAATTACAAGATTGAGGAAGGAGCAGCCCCAGTCACGATGTTATGACTGGATTTTGGACAGTCTCTTCAGAAACAAACTGAAGTTAATGTCCCTACTCAGCATGCTAACTCGGACATACTTTGCGGAAACCCCAAACTGTCTTCCTCCTCGGGCCAAAATCTTGTGCCCTTTCAGGAAGCTTTCGCAATCCTCCACTGCATCGTCTTCACATTTGAGCCATGCAAAAGCTGCAGAGAAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

248

Amino Acids

28.12

Weight (kDa)

8.37

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 5 - 108 1.6e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 23 - 145 5.2e-20 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 252
Acc65I GGTACC 1 cut(s) 231
AccB1I GGYRCC 1 cut(s) 231
AccI GTMKAC 1 cut(s) 60
AciI CCGC 1 cut(s) 626
AclWI GGATC 1 cut(s) 410
AcsI RAATTY 2 cut(s) 175, 354
AcuI CTGAAG 2 cut(s) 553, 602
AfaI GTAC 3 cut(s) 223, 233, 248
AfiI CCNNNNNNNGG 1 cut(s) 494
AjnI CCWGG 1 cut(s) 226
AluBI AGCT 4 cut(s) 291, 441, 682, 731
AluI AGCT 4 cut(s) 291, 441, 682, 731
Alw26I GTCTC 2 cut(s) 390, 569
AlwI GGATC 1 cut(s) 410
AlwNI CAGNNNCTG 1 cut(s) 344
Ama87I CYCGRG 1 cut(s) 651
AoxI GGCC 2 cut(s) 163, 654
ApeKI GCWGC 4 cut(s) 438, 479, 526, 731
ApoI RAATTY 2 cut(s) 175, 354
Asp718I GGTACC 1 cut(s) 231
AspLEI GCGC 1 cut(s) 479
AspS9I GGNCC 1 cut(s) 654
AsuII TTCGAA 1 cut(s) 49
AvaI CYCGRG 1 cut(s) 651
BaeGI GKGCMC 2 cut(s) 500, 671
BanI GGYRCC 1 cut(s) 231
BbsI GAAGAC 3 cut(s) 45, 635, 699
BbvI GCAGC 4 cut(s) 450, 491, 538, 718
BccI CCATC 1 cut(s) 389
BciT130I CCWGG 1 cut(s) 228
BcoDI GTCTC 2 cut(s) 390, 569
BfmI CTRYAG 3 cut(s) 183, 345, 732
BfuAI ACCTGC 1 cut(s) 252
BisI GCNGC 4 cut(s) 439, 480, 527, 732
BlsI GCNGC 4 cut(s) 440, 481, 528, 733
BmcAI AGTACT 1 cut(s) 248
Bme1390I CCNGG 1 cut(s) 228
BmeT110I CYCGRG 1 cut(s) 651
BmgT120I GGNCC 1 cut(s) 654
BmiI GGNNCC 1 cut(s) 233
BmrFI CCNGG 1 cut(s) 228
BmrI ACTGGG 1 cut(s) 526
BmsI GCATC 2 cut(s) 55, 710
BmuI ACTGGG 1 cut(s) 526
BpiI GAAGAC 3 cut(s) 45, 635, 699
Bpu14I TTCGAA 1 cut(s) 49
BsaJI CCNNGG 2 cut(s) 227, 650
Bsc4I CCNNNNNNNGG 1 cut(s) 494
Bse1I ACTGG 3 cut(s) 214, 532, 554
BseBI CCWGG 1 cut(s) 228
BseDI CCNNGG 2 cut(s) 227, 650
BseGI GGATG 2 cut(s) 109, 381
BseLI CCNNNNNNNGG 1 cut(s) 494
BseMII CTCAG 2 cut(s) 234, 613
BseNI ACTGG 3 cut(s) 214, 532, 554
BseRI GAGGAG 1 cut(s) 639
BseSI GKGCMC 2 cut(s) 500, 671
BseXI GCAGC 4 cut(s) 450, 491, 538, 718
BseYI CCCAGC 1 cut(s) 142
BshFI GGCC 2 cut(s) 165, 656
BshNI GGYRCC 1 cut(s) 231
BsiHKCI CYCGRG 1 cut(s) 651
BslFI GGGAC 1 cut(s) 577
BslI CCNNNNNNNGG 1 cut(s) 494
BsmAI GTCTC 2 cut(s) 390, 569
BsmFI GGGAC 1 cut(s) 577
BsnI GGCC 2 cut(s) 165, 656
BsoBI CYCGRG 1 cut(s) 651
Bsp119I TTCGAA 1 cut(s) 49
Bsp1286I GDGCHC 2 cut(s) 500, 671
Bsp143I GATC 1 cut(s) 415
BspACI CCGC 1 cut(s) 626
BspANI GGCC 2 cut(s) 165, 656
BspCNI CTCAG 2 cut(s) 235, 612
BspLI GGNNCC 1 cut(s) 233
BspMAI CTGCAG 1 cut(s) 736
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 1 cut(s) 410
BspT104I TTCGAA 1 cut(s) 49
BspT107I GGYRCC 1 cut(s) 231
BsrI ACTGG 3 cut(s) 214, 532, 554
BssECI CCNNGG 2 cut(s) 227, 650
BssMI GATC 1 cut(s) 415
Bst2UI CCWGG 1 cut(s) 228
Bst4CI ACNGT 5 cut(s) 17, 346, 407, 563, 641
Bst6I CTCTTC 1 cut(s) 572
BstAPI GCANNNNNTGC 1 cut(s) 731
BstBI TTCGAA 1 cut(s) 49
BstC8I GCNNGC 1 cut(s) 605
BstDEI CTNAG 2 cut(s) 243, 599
BstF5I GGATG 2 cut(s) 109, 381
BstHHI GCGC 1 cut(s) 479
BstKTI GATC 1 cut(s) 418
BstMAI GTCTC 2 cut(s) 390, 569
BstMBI GATC 1 cut(s) 415
BstMWI GCNNNNNNNGC 1 cut(s) 731
BstNI CCWGG 1 cut(s) 228
BstNSI RCATGY 1 cut(s) 607
BstSCI CCNGG 1 cut(s) 226
BstSFI CTRYAG 3 cut(s) 183, 345, 732
BstSLI GKGCMC 2 cut(s) 500, 671
BstV1I GCAGC 4 cut(s) 450, 491, 538, 718
BstV2I GAAGAC 3 cut(s) 45, 635, 699
BstXI CCANNNNNNTGG 1 cut(s) 28
BsuRI GGCC 2 cut(s) 165, 656
BtsCI GGATG 2 cut(s) 109, 381
BtsI GCAGTG 1 cut(s) 696
BtsIMutI CAGTG 1 cut(s) 696
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 1 cut(s) 605
CaiI CAGNNNCTG 1 cut(s) 344
CfoI GCGC 1 cut(s) 479
Cfr13I GGNCC 1 cut(s) 654
Csp6I GTAC 3 cut(s) 222, 232, 247
CviAII CATG 2 cut(s) 604, 722
CviQI GTAC 3 cut(s) 222, 232, 247
DdeI CTNAG 2 cut(s) 243, 599
DpnI GATC 1 cut(s) 417
DpnII GATC 1 cut(s) 415
Eam1104I CTCTTC 1 cut(s) 572
EarI CTCTTC 1 cut(s) 572
Eco57I CTGAAG 2 cut(s) 553, 602
Eco88I CYCGRG 1 cut(s) 651
EcoRI GAATTC 1 cut(s) 354
EcoRII CCWGG 1 cut(s) 226
FaeI CATG 2 cut(s) 607, 725
FaiI YATR 9 cut(s) 201, 203, 288, 335, 453, 546, 605, 619, 723
FalI AAGNNNNNCTT 2 cut(s) 30, 62
FaqI GGGAC 1 cut(s) 577
FatI CATG 2 cut(s) 603, 721
FblI GTMKAC 1 cut(s) 60
Fnu4HI GCNGC 4 cut(s) 439, 480, 527, 732
FokI GGATG 2 cut(s) 116, 368
Fsp4HI GCNGC 4 cut(s) 439, 480, 527, 732
GlaI GCGC 1 cut(s) 478
GluI GCNGC 4 cut(s) 439, 480, 527, 732
GsaI CCCAGC 1 cut(s) 146
HaeIII GGCC 2 cut(s) 165, 656
HhaI GCGC 1 cut(s) 479
Hin1II CATG 2 cut(s) 607, 725
Hin6I GCGC 1 cut(s) 477
HinP1I GCGC 1 cut(s) 477
HindIII AAGCTT 1 cut(s) 680
HinfI GANTC 1 cut(s) 196
Hpy166II GTNNAC 1 cut(s) 61
Hpy188I TCNGA 3 cut(s) 340, 572, 615
Hpy188III TCNNGA 3 cut(s) 171, 537, 676
Hpy8I GTNNAC 1 cut(s) 61
HpyAV CCTTC 1 cut(s) 514
HpyCH4III ACNGT 5 cut(s) 17, 346, 407, 563, 641
HpyCH4V TGCA 6 cut(s) 68, 88, 391, 701, 725, 734
HpyF10VI GCNNNNNNNGC 1 cut(s) 731
HpyF3I CTNAG 2 cut(s) 243, 599
Hsp92II CATG 2 cut(s) 607, 725
HspAI GCGC 1 cut(s) 477
KpnI GGTACC 1 cut(s) 235
Kzo9I GATC 1 cut(s) 415
LmnI GCTCC 1 cut(s) 523
Lsp1109I GCAGC 4 cut(s) 450, 491, 538, 718
LweI GCATC 2 cut(s) 55, 710
MaeIII GTNAC 2 cut(s) 193, 534
MalI GATC 1 cut(s) 417
MboI GATC 1 cut(s) 415
MboII GAAGA 4 cut(s) 50, 559, 635, 699
MhlI GDGCHC 2 cut(s) 500, 671
MluCI AATT 7 cut(s) 93, 175, 312, 354, 432, 491, 504
MlyI GAGTC 1 cut(s) 190
MmeI TCCRAC 1 cut(s) 288
MnlI CCTC 6 cut(s) 475, 493, 510, 657, 660, 703
MseI TTAA 3 cut(s) 92, 266, 587
MslI CAYNNNNRTG 2 cut(s) 102, 386
MspR9I CCNGG 1 cut(s) 228
MvaI CCWGG 1 cut(s) 228
MwoI GCNNNNNNNGC 1 cut(s) 731
NdeII GATC 1 cut(s) 415
NlaIII CATG 2 cut(s) 607, 725
NlaIV GGNNCC 1 cut(s) 233
NmuCI GTSAC 2 cut(s) 193, 534
NspI RCATGY 1 cut(s) 607
NspV TTCGAA 1 cut(s) 49
PaeI GCATGC 1 cut(s) 607
PkrI GCNGC 4 cut(s) 440, 481, 528, 733
PleI GAGTC 1 cut(s) 190
PpsI GAGTC 1 cut(s) 190
Psp6I CCWGG 1 cut(s) 226
PspFI CCCAGC 1 cut(s) 142
PspGI CCWGG 1 cut(s) 226
PspN4I GGNNCC 1 cut(s) 233
PspPI GGNCC 1 cut(s) 654
PstI CTGCAG 1 cut(s) 736
PstNI CAGNNNCTG 1 cut(s) 344
RsaI GTAC 3 cut(s) 223, 233, 248
RsaNI GTAC 3 cut(s) 222, 232, 247
RseI CAYNNNNRTG 2 cut(s) 102, 386
SaqAI TTAA 3 cut(s) 92, 266, 587
SatI GCNGC 4 cut(s) 439, 480, 527, 732
Sau3AI GATC 1 cut(s) 415
Sau96I GGNCC 1 cut(s) 654
ScaI AGTACT 1 cut(s) 248
SchI GAGTC 1 cut(s) 190
ScrFI CCNGG 1 cut(s) 228
SduI GDGCHC 2 cut(s) 500, 671
SfaNI GCATC 2 cut(s) 55, 710
SfcI CTRYAG 3 cut(s) 183, 345, 732
SfuI TTCGAA 1 cut(s) 49
SmiMI CAYNNNNRTG 2 cut(s) 102, 386
SphI GCATGC 1 cut(s) 607
Sse9I AATT 7 cut(s) 93, 175, 312, 354, 432, 491, 504
SsiI CCGC 1 cut(s) 626
StyD4I CCNGG 1 cut(s) 226
TaaI ACNGT 5 cut(s) 17, 346, 407, 563, 641
TaqI TCGA 1 cut(s) 49
TasI AATT 7 cut(s) 93, 175, 312, 354, 432, 491, 504
TatI WGTACW 1 cut(s) 246
Tru1I TTAA 3 cut(s) 92, 266, 587
Tru9I TTAA 3 cut(s) 92, 266, 587
TscAI CASTG 1 cut(s) 703
TseFI GTSAC 2 cut(s) 193, 534
TseI GCWGC 4 cut(s) 438, 479, 526, 731
Tsp45I GTSAC 2 cut(s) 193, 534
TspRI CASTG 1 cut(s) 703
XapI RAATTY 2 cut(s) 175, 354
XceI RCATGY 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 60
ZrmI AGTACT 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.