Rmu_sc0004512.1_g000004

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004512.1
OG0000083
Physical Location & Seq
Reverse (-)
14682 .. 23708
9027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004512.1_g000004.1.cds

Sequence Viewer

Length: 2349 bp
atggctgtatttgtgttgtcgctggggatggggaccggactggagatcgatctaaaccagaacggagcggctcgtggctgtatgtggaaggcagggtgggatcggtggtttgctgggttggagcgttggcttgatggattggatgaaggcggctcgatagcccttgattcgaatcgtggcgtagctccatggtggaagtttgggcgtttcaatagtagtgaggcacgacaggctagcgggaatgcgccggtggagggggcccgacttcagaggttgggcggtggatatggtggttgggcggaggcgtggatgcaggtgttgatttgggctgagaagggatttgggctccttgttgttttggtctcttgggactggacattgctagtgggccccgtctgggcttgtgcttgggttagggctcaatttttgggcgagctagtcgggtcttgtacctgtgtatgcactctaagtctcttgtctgctctgagtaggcagcgagttttttgcttcgtcaaatggtcgctaccaccaagtggcagggtgaagctaagtgtcgtcggatttatcctccggcggcaacatagtaggaaagctgtgcgtatggttattatgctatgttgtatcgatccctcactccccaaaagtactcgtgtcttgatgttgccgacattcaatcagttcatcttttcactactacttctttggtttgctcttaatcttttgctccttgttcatgcacaggatgatcagacaggcttcattagcatagattgtggcaaatcgggttctagctatactgaaaaagttactggaattacttacatttcggactcaaacttcgtcgacacaggtgaaagtaacttcattttggataaatatttggatgcctatcaacagccataccaatctctcaggagcttccctcaaggcatcaggaactgctacaaaataaacattagaagtggaacgaaatatttgatccgagcagtgttcgtgtatgggaattatgatgggcaggacaagttaccaaaatttgatctgtatgttggaccaaatttgtgggattcagtgaagcttatgaatgcatccattggcgtaaccaaggagctcatacattatgttccaagaccaagaaactatatacaactttgtctggtgaacaagctctctggaattccatttatatcagcaatagagttgaggcctcttcccaactcaacttattcaactgaagaggggtcattggcacttgtctcacggtttgacactggtcaaatagcccctactttgacaaaatacaggtatccgttcgatatcctcgatcgcttctggtatccgtacgatagtgactggaataattggacgcaattgagtgcctcaaccaacacaagctcggcttttatgccatctacgcgttctggtactgactctgattataaattacctttcgtggttatgagtactgctgccacgcccagaaataggaatggtgcattgaataatttctggccgcctgaagctaaaaatggacagtattacatttacttgcacttggctgaagttgaaagactccaaagcatgtgcaaccagtccaggcaattcaagatgactatgtatggaagactattatttgggccatatgttcctcaatattacatgagtgaaactttttataaccgtaaggctctaagtggaggacaagagaattttacaatctccatgactggtaatgctacccttccgcctattctcaatgccttcgagatttacatgctaaaaaagttctcagagtcagaaacaaaccaagaagatgccggtgaccggaatctggcgaaagttggccggaatccggcaaccagtggctggattccgtgtagccggattcttgcgaaagttggctggaatctagcgaaagttgaccagattccggaggccagtgaccggattcctgcggccggtgacgggctccggcgaagtctcctatgctatcaggaaagtgatgggtccccacgaatcatatccttgcacttgccctggagtggattacaaggggagataactccttctatatttaaacttgtaatgatacaatctttgaacctatcaaacaacaatttgacaggaccaattccaaaggttttgtctcaactgccaaacttagttttcctggatttgtcaaacaacaaattaactggcccaattccagatattttctctcaaatgccaaagttaaatatcttaaacttggagaacaacaagctcacaggctctattccggaaggactaattcgaagaatgaatagtggtttcttgtcattaaggtatgtccctttctacagaaaatcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

782

Amino Acids

87.83

Weight (kDa)

9.14

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1437, 1674
AarI CACCTGC 1 cut(s) 304
Acc36I ACCTGC 1 cut(s) 304
AccB7I CCANNNNNTGG 2 cut(s) 533, 1863
AccBSI CCGCTC 1 cut(s) 68
AccI GTMKAC 1 cut(s) 843
AccII CGCG 1 cut(s) 1414
AccIII TCCGGA 2 cut(s) 1927, 2275
AciI CCGC 9 cut(s) 68, 150, 237, 279, 299, 574, 1511, 1742, 1952
AclWI GGATC 3 cut(s) 108, 620, 973
AcoI YGGCCR 3 cut(s) 1508, 1840, 1953
AcsI RAATTY 4 cut(s) 1031, 1054, 1173, 1705
AcuI CTGAAG 4 cut(s) 251, 1251, 1536, 1578
AdeI CACNNNGTG 1 cut(s) 533
AfaI GTAC 5 cut(s) 451, 646, 1340, 1423, 1462
AflIII ACRYGT 1 cut(s) 1412
AgsI TTSAA 7 cut(s) 211, 673, 1227, 1498, 1565, 1603, 2098
AjnI CCWGG 3 cut(s) 1592, 2033, 2166
Alw21I GWGCWC 1 cut(s) 1110
Alw26I GTCTC 5 cut(s) 367, 476, 1258, 1982, 2148
AlwI GGATC 3 cut(s) 108, 620, 973
AlwNI CAGNNNCTG 2 cut(s) 939, 1863
Aor13HI TCCGGA 2 cut(s) 1927, 2275
AoxI GGCC 9 cut(s) 258, 388, 1202, 1508, 1634, 1840, 1932, 1953, 2194
ApaI GGGCCC 2 cut(s) 262, 392
ApeKI GCWGC 2 cut(s) 493, 1466
ApoI RAATTY 4 cut(s) 1031, 1054, 1173, 1705
ArsI GACNNNNNNTTYG 4 cut(s) 821, 853, 2126, 2158
Asp700I GAANNNNTTC 1 cut(s) 1502
AspLEI GCGC 1 cut(s) 247
AsuHPI GGTGA 5 cut(s) 553, 863, 1168, 1829, 1970
AsuII TTCGAA 2 cut(s) 170, 2290
AsuNHI GCTAGC 1 cut(s) 233
AvaII GGWCC 4 cut(s) 33, 1049, 2004, 2123
BaeGI GKGCMC 2 cut(s) 262, 392
BanII GRGCYC 6 cut(s) 262, 348, 392, 421, 1110, 1968
BauI CACGAG 2 cut(s) 72, 648
BbsI GAAGAC 1 cut(s) 1627
Bbv12I GWGCWC 1 cut(s) 1110
BbvI GCAGC 2 cut(s) 505, 1453
BccI CCATC 5 cut(s) 22, 128, 1004, 1414, 1994
BcgI CGANNNNNNTGC 2 cut(s) 486, 520
BciT130I CCWGG 3 cut(s) 1594, 2035, 2168
BciVI GTATCC 2 cut(s) 1314, 1344
BclI TGATCA 1 cut(s) 745
BcoDI GTCTC 5 cut(s) 367, 476, 1258, 1982, 2148
BfaI CTAG 5 cut(s) 234, 383, 437, 789, 1907
BfmI CTRYAG 1 cut(s) 2335
BfuAI ACCTGC 1 cut(s) 304
BfuI GTATCC 2 cut(s) 1314, 1344
BisI GCNGC 7 cut(s) 69, 151, 494, 575, 1467, 1511, 1953
BlsI GCNGC 7 cut(s) 70, 152, 495, 576, 1468, 1512, 1954
BmcAI AGTACT 2 cut(s) 646, 1462
Bme1390I CCNGG 3 cut(s) 1594, 2035, 2168
Bme18I GGWCC 4 cut(s) 33, 1049, 2004, 2123
BmiI GGNNCC 9 cut(s) 34, 259, 260, 347, 390, 391, 1967, 2005, 2006
BmrFI CCNGG 3 cut(s) 1594, 2035, 2168
BmsI GCATC 5 cut(s) 300, 874, 939, 1094, 1801
BmtI GCTAGC 1 cut(s) 237
BoxI GACNNNNGTC 1 cut(s) 1269
BpiI GAAGAC 1 cut(s) 1627
BplI GAGNNNNNCTC 2 cut(s) 907, 939
BpmI CTGGAG 2 cut(s) 62, 2056
Bpu14I TTCGAA 2 cut(s) 170, 2290
BpuEI CTTGAG 1 cut(s) 909
Bsa29I ATCGAT 2 cut(s) 48, 624
BsaBI GATNNNNATC 2 cut(s) 171, 888
BsaI GGTCTC 1 cut(s) 367
BsaJI CCNNGG 3 cut(s) 188, 1101, 2033
BsaWI WCCGGW 5 cut(s) 35, 1821, 1927, 1941, 2275
Bse118I RCCGGY 3 cut(s) 247, 1814, 1955
Bse3DI GCAATG 1 cut(s) 377
Bse8I GATNNNNATC 2 cut(s) 171, 888
BseAI TCCGGA 2 cut(s) 1927, 2275
BseBI CCWGG 3 cut(s) 1594, 2035, 2168
BseCI ATCGAT 2 cut(s) 48, 624
BseDI CCNNGG 3 cut(s) 188, 1101, 2033
BseGI GGATG 6 cut(s) 33, 148, 315, 748, 889, 1085
BseJI GATNNNNATC 2 cut(s) 171, 888
BseMI GCAATG 1 cut(s) 377
BseMII CTCAG 4 cut(s) 321, 476, 925, 1800
BseSI GKGCMC 2 cut(s) 262, 392
BseX3I CGGCCG 1 cut(s) 1953
BseXI GCAGC 2 cut(s) 505, 1453
BseYI CCCAGC 2 cut(s) 22, 113
Bsh1236I CGCG 1 cut(s) 1414
Bsh1285I CGRYCG 2 cut(s) 1324, 1956
BshFI GGCC 9 cut(s) 260, 390, 1204, 1510, 1636, 1842, 1934, 1955, 2196
BshVI ATCGAT 2 cut(s) 48, 624
BsiEI CGRYCG 2 cut(s) 1324, 1956
BsiHKAI GWGCWC 1 cut(s) 1110
BsiWI CGTACG 1 cut(s) 1338
BslFI GGGAC 4 cut(s) 46, 383, 1990, 2312
BsmAI GTCTC 5 cut(s) 367, 476, 1258, 1982, 2148
BsmFI GGGAC 4 cut(s) 46, 383, 1990, 2312
BsmI GAATGC 2 cut(s) 247, 1087
BsnI GGCC 9 cut(s) 260, 390, 1204, 1510, 1636, 1842, 1934, 1955, 2196
Bso31I GGTCTC 1 cut(s) 367
Bsp119I TTCGAA 2 cut(s) 170, 2290
Bsp120I GGGCCC 2 cut(s) 258, 388
Bsp1286I GDGCHC 6 cut(s) 262, 348, 392, 421, 1110, 1968
Bsp13I TCCGGA 2 cut(s) 1927, 2275
Bsp143I GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
Bsp19I CCATGG 1 cut(s) 188
BspACI CCGC 9 cut(s) 68, 150, 237, 279, 299, 574, 1511, 1742, 1952
BspANI GGCC 9 cut(s) 260, 390, 1204, 1510, 1636, 1842, 1934, 1955, 2196
BspCNI CTCAG 4 cut(s) 322, 477, 924, 1799
BspDI ATCGAT 2 cut(s) 48, 624
BspEI TCCGGA 2 cut(s) 1927, 2275
BspFNI CGCG 1 cut(s) 1414
BspLI GGNNCC 9 cut(s) 34, 259, 260, 347, 390, 391, 1967, 2005, 2006
BspMI ACCTGC 1 cut(s) 304
BspOI GCTAGC 1 cut(s) 237
BspPI GGATC 3 cut(s) 108, 620, 973
BspT104I TTCGAA 2 cut(s) 170, 2290
BspTNI GGTCTC 1 cut(s) 367
BsrBI CCGCTC 1 cut(s) 68
BsrDI GCAATG 1 cut(s) 377
BsrFI RCCGGY 3 cut(s) 247, 1814, 1955
BssAI RCCGGY 3 cut(s) 247, 1814, 1955
BssECI CCNNGG 3 cut(s) 188, 1101, 2033
BssMI GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
BssSI CACGAG 2 cut(s) 72, 648
BssT1I CCWWGG 2 cut(s) 188, 1101
Bst2BI CACGAG 2 cut(s) 72, 648
Bst2UI CCWGG 3 cut(s) 1594, 2035, 2168
Bst4CI ACNGT 3 cut(s) 1260, 1533, 1679
Bst6I CTCTTC 2 cut(s) 1212, 1227
BstBI TTCGAA 2 cut(s) 170, 2290
BstC8I GCNNGC 2 cut(s) 235, 434
BstDEI CTNAG 8 cut(s) 330, 467, 485, 548, 911, 1688, 1786, 2158
BstDSI CCRYGG 1 cut(s) 188
BstEII GGTNACC 1 cut(s) 1817
BstF5I GGATG 6 cut(s) 33, 148, 315, 748, 889, 1085
BstFNI CGCG 1 cut(s) 1414
BstHHI GCGC 1 cut(s) 247
BstKTI GATC 8 cut(s) 48, 52, 103, 628, 748, 981, 1039, 1324
BstMAI GTCTC 5 cut(s) 367, 476, 1258, 1982, 2148
BstMBI GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
BstMCI CGRYCG 2 cut(s) 1324, 1956
BstMWI GCNNNNNNNGC 3 cut(s) 230, 762, 1411
BstNI CCWGG 3 cut(s) 1594, 2035, 2168
BstNSI RCATGY 2 cut(s) 1582, 1774
BstPAI GACNNNNGTC 1 cut(s) 1269
BstPI GGTNACC 1 cut(s) 1817
BstSCI CCNGG 3 cut(s) 1592, 2033, 2166
BstSFI CTRYAG 1 cut(s) 2335
BstSLI GKGCMC 2 cut(s) 262, 392
BstUI CGCG 1 cut(s) 1414
BstV1I GCAGC 2 cut(s) 505, 1453
BstV2I GAAGAC 1 cut(s) 1627
BstXI CCANNNNNNTGG 1 cut(s) 1059
BstZI CGGCCG 1 cut(s) 1953
Bsu15I ATCGAT 2 cut(s) 48, 624
BsuI GTATCC 2 cut(s) 1314, 1344
BsuRI GGCC 9 cut(s) 260, 390, 1204, 1510, 1636, 1842, 1934, 1955, 2196
BsuTUI ATCGAT 2 cut(s) 48, 624
BtgI CCRYGG 1 cut(s) 188
BtsCI GGATG 6 cut(s) 33, 148, 315, 748, 889, 1085
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 5 cut(s) 993, 1074, 1266, 1864, 1942
BveI ACCTGC 1 cut(s) 304
Cac8I GCNNGC 2 cut(s) 235, 434
CaiI CAGNNNCTG 2 cut(s) 939, 1863
CfoI GCGC 1 cut(s) 247
Cfr10I RCCGGY 3 cut(s) 247, 1814, 1955
ClaI ATCGAT 2 cut(s) 48, 624
CseI GACGC 1 cut(s) 1372
Csp6I GTAC 5 cut(s) 450, 645, 1339, 1422, 1461
CviAII CATG 6 cut(s) 189, 734, 1579, 1657, 1720, 1771
CviQI GTAC 5 cut(s) 450, 645, 1339, 1422, 1461
DdeI CTNAG 8 cut(s) 330, 467, 485, 548, 911, 1688, 1786, 2158
DpnI GATC 8 cut(s) 47, 51, 102, 627, 747, 980, 1038, 1323
DpnII GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
DraI TTTAAA 1 cut(s) 2074
DraIII CACNNNGTG 1 cut(s) 533
EaeI YGGCCR 3 cut(s) 1508, 1840, 1953
EagI CGGCCG 1 cut(s) 1953
Eam1104I CTCTTC 2 cut(s) 1212, 1227
EarI CTCTTC 2 cut(s) 1212, 1227
EciI GGCGGA 2 cut(s) 314, 1731
Ecl136II GAGCTC 1 cut(s) 1108
EclXI CGGCCG 1 cut(s) 1953
Eco130I CCWWGG 2 cut(s) 188, 1101
Eco147I AGGCCT 1 cut(s) 1204
Eco24I GRGCYC 6 cut(s) 262, 348, 392, 421, 1110, 1968
Eco31I GGTCTC 1 cut(s) 367
Eco32I GATATC 1 cut(s) 1315
Eco47I GGWCC 4 cut(s) 33, 1049, 2004, 2123
Eco52I CGGCCG 1 cut(s) 1953
Eco53kI GAGCTC 1 cut(s) 1108
Eco57I CTGAAG 4 cut(s) 251, 1251, 1536, 1578
Eco91I GGTNACC 1 cut(s) 1817
EcoICRI GAGCTC 1 cut(s) 1108
EcoO109I RGGNCCY 3 cut(s) 258, 389, 2004
EcoO65I GGTNACC 1 cut(s) 1817
EcoRI GAATTC 1 cut(s) 1173
EcoRII CCWGG 3 cut(s) 1592, 2033, 2166
EcoRV GATATC 1 cut(s) 1315
EcoT14I CCWWGG 2 cut(s) 188, 1101
EcoT22I ATGCAT 1 cut(s) 1087
EcoT38I GRGCYC 6 cut(s) 262, 348, 392, 421, 1110, 1968
ErhI CCWWGG 2 cut(s) 188, 1101
FaeI CATG 6 cut(s) 192, 737, 1582, 1660, 1723, 1774
FalI AAGNNNNNCTT 2 cut(s) 1381, 1413
FaqI GGGAC 4 cut(s) 46, 383, 1990, 2312
FatI CATG 6 cut(s) 188, 733, 1578, 1656, 1719, 1770
FauI CCCGC 1 cut(s) 230
FauNDI CATATG 1 cut(s) 1639
FbaI TGATCA 1 cut(s) 745
FblI GTMKAC 1 cut(s) 843
Fnu4HI GCNGC 7 cut(s) 69, 151, 494, 575, 1467, 1511, 1953
FokI GGATG 6 cut(s) 40, 155, 322, 755, 896, 1072
FriOI GRGCYC 6 cut(s) 262, 348, 392, 421, 1110, 1968
Fsp4HI GCNGC 7 cut(s) 69, 151, 494, 575, 1467, 1511, 1953
FspBI CTAG 5 cut(s) 234, 383, 437, 789, 1907
GlaI GCGC 1 cut(s) 246
GluI GCNGC 7 cut(s) 69, 151, 494, 575, 1467, 1511, 1953
GsaI CCCAGC 2 cut(s) 26, 117
GsuI CTGGAG 2 cut(s) 62, 2056
HaeIII GGCC 9 cut(s) 260, 390, 1204, 1510, 1636, 1842, 1934, 1955, 2196
HgaI GACGC 1 cut(s) 1372
HhaI GCGC 1 cut(s) 247
Hin1II CATG 6 cut(s) 192, 737, 1582, 1660, 1723, 1774
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HincII GTYRAC 2 cut(s) 844, 1918
HindII GTYRAC 2 cut(s) 844, 1918
HindIII AAGCTT 1 cut(s) 1073
HphI GGTGA 5 cut(s) 553, 863, 1168, 1829, 1970
Hpy166II GTNNAC 3 cut(s) 844, 1159, 1918
Hpy188I TCNGA 9 cut(s) 270, 486, 560, 750, 829, 983, 1432, 1789, 1795
Hpy8I GTNNAC 3 cut(s) 844, 1159, 1918
Hpy99I CGWCG 2 cut(s) 560, 845
HpyAV CCTTC 7 cut(s) 82, 140, 328, 1748, 1768, 2073, 2273
HpyCH4III ACNGT 3 cut(s) 1260, 1533, 1679
HpyCH4V TGCA 8 cut(s) 313, 462, 737, 1085, 1493, 1549, 1584, 2026
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 762, 1411
HpyF3I CTNAG 8 cut(s) 330, 467, 485, 548, 911, 1688, 1786, 2158
Hsp92II CATG 6 cut(s) 192, 737, 1582, 1660, 1723, 1774
HspAI GCGC 1 cut(s) 245
KflI GGGWCCC 1 cut(s) 2004
Kpn2I TCCGGA 2 cut(s) 1927, 2275
Ksp22I TGATCA 1 cut(s) 745
Kzo9I GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
LmnI GCTCC 8 cut(s) 65, 121, 190, 351, 729, 915, 1105, 1971
Lsp1109I GCAGC 2 cut(s) 505, 1453
LweI GCATC 5 cut(s) 300, 874, 939, 1094, 1801
MaeI CTAG 5 cut(s) 234, 383, 437, 789, 1907
MaeIII GTNAC 8 cut(s) 805, 857, 1023, 1096, 1346, 1817, 1937, 1958
MalI GATC 8 cut(s) 47, 51, 102, 627, 747, 980, 1038, 1323
MbiI CCGCTC 1 cut(s) 68
MboI GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
MboII GAAGA 5 cut(s) 1199, 1244, 1632, 1820, 2304
MfeI CAATTG 1 cut(s) 1367
MhlI GDGCHC 6 cut(s) 262, 348, 392, 421, 1110, 1968
MluI ACGCGT 1 cut(s) 1412
MlyI GAGTC 4 cut(s) 824, 1421, 1563, 1799
MmeI TCCRAC 3 cut(s) 99, 538, 1027
Mph1103I ATGCAT 1 cut(s) 1087
MroI TCCGGA 2 cut(s) 1927, 2275
MroXI GAANNNNTTC 1 cut(s) 1502
MseI TTAA 6 cut(s) 714, 2073, 2189, 2231, 2240, 2318
MspR9I CCNGG 3 cut(s) 1594, 2035, 2168
MunI CAATTG 1 cut(s) 1367
Mva1269I GAATGC 2 cut(s) 247, 1087
MvaI CCWGG 3 cut(s) 1594, 2035, 2168
MvnI CGCG 1 cut(s) 1414
MwoI GCNNNNNNNGC 3 cut(s) 230, 762, 1411
NcoI CCATGG 1 cut(s) 188
NdeI CATATG 1 cut(s) 1639
NdeII GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
NheI GCTAGC 1 cut(s) 233
NlaIII CATG 6 cut(s) 192, 737, 1582, 1660, 1723, 1774
NlaIV GGNNCC 9 cut(s) 34, 259, 260, 347, 390, 391, 1967, 2005, 2006
NmeAIII GCCGAG 1 cut(s) 1373
NmuCI GTSAC 4 cut(s) 1346, 1817, 1937, 1958
NsiI ATGCAT 1 cut(s) 1087
NspI RCATGY 2 cut(s) 1582, 1774
NspV TTCGAA 2 cut(s) 170, 2290
PaqCI CACCTGC 1 cut(s) 304
PceI AGGCCT 1 cut(s) 1204
PcsI WCGNNNNNNNCGW 1 cut(s) 1317
PctI GAATGC 2 cut(s) 247, 1087
PdmI GAANNNNTTC 1 cut(s) 1502
Pfl23II CGTACG 1 cut(s) 1338
PflMI CCANNNNNTGG 2 cut(s) 533, 1863
PfoI TCCNGGA 1 cut(s) 2166
PkrI GCNGC 7 cut(s) 70, 152, 495, 576, 1468, 1512, 1954
Ple19I CGATCG 1 cut(s) 1324
PleI GAGTC 4 cut(s) 824, 1421, 1563, 1798
PpsI GAGTC 4 cut(s) 824, 1421, 1563, 1798
PpuMI RGGWCCY 1 cut(s) 2004
PshAI GACNNNNGTC 1 cut(s) 1269
PsiI TTATAA 2 cut(s) 1437, 1674
Psp124BI GAGCTC 1 cut(s) 1110
Psp5II RGGWCCY 1 cut(s) 2004
Psp6I CCWGG 3 cut(s) 1592, 2033, 2166
PspEI GGTNACC 1 cut(s) 1817
PspFI CCCAGC 2 cut(s) 22, 113
PspGI CCWGG 3 cut(s) 1592, 2033, 2166
PspLI CGTACG 1 cut(s) 1338
PspN4I GGNNCC 9 cut(s) 34, 259, 260, 347, 390, 391, 1967, 2005, 2006
PspOMI GGGCCC 2 cut(s) 258, 388
PspPPI RGGWCCY 1 cut(s) 2004
PstNI CAGNNNCTG 2 cut(s) 939, 1863
PvuI CGATCG 1 cut(s) 1324
RsaI GTAC 5 cut(s) 451, 646, 1340, 1423, 1462
RsaNI GTAC 5 cut(s) 450, 645, 1339, 1422, 1461
SacI GAGCTC 1 cut(s) 1110
SalI GTCGAC 1 cut(s) 842
SaqAI TTAA 6 cut(s) 714, 2073, 2189, 2231, 2240, 2318
SatI GCNGC 7 cut(s) 69, 151, 494, 575, 1467, 1511, 1953
Sau3AI GATC 8 cut(s) 45, 49, 100, 625, 745, 978, 1036, 1321
ScaI AGTACT 2 cut(s) 646, 1462
SchI GAGTC 4 cut(s) 824, 1421, 1563, 1799
ScrFI CCNGG 3 cut(s) 1594, 2035, 2168
SduI GDGCHC 6 cut(s) 262, 348, 392, 421, 1110, 1968
SfaNI GCATC 5 cut(s) 300, 874, 939, 1094, 1801
SfcI CTRYAG 1 cut(s) 2335
SfuI TTCGAA 2 cut(s) 170, 2290
SgrAI CRCCGGYG 1 cut(s) 247
SinI GGWCC 4 cut(s) 33, 1049, 2004, 2123
SmlI CTYRAG 1 cut(s) 924
SmoI CTYRAG 1 cut(s) 924
SseBI AGGCCT 1 cut(s) 1204
SsiI CCGC 9 cut(s) 68, 150, 237, 279, 299, 574, 1511, 1742, 1952
SspI AATATT 3 cut(s) 878, 974, 1652
SspMI CTAG 5 cut(s) 234, 383, 437, 789, 1907
SstI GAGCTC 1 cut(s) 1110
StuI AGGCCT 1 cut(s) 1204
StyD4I CCNGG 3 cut(s) 1592, 2033, 2166
StyI CCWWGG 2 cut(s) 188, 1101
TaaI ACNGT 3 cut(s) 1260, 1533, 1679
TaqI TCGA 9 cut(s) 48, 155, 170, 624, 843, 1311, 1320, 1761, 2290
TatI WGTACW 2 cut(s) 644, 1460
TauI GCSGC 5 cut(s) 71, 153, 577, 1513, 1955
Tru1I TTAA 6 cut(s) 714, 2073, 2189, 2231, 2240, 2318
Tru9I TTAA 6 cut(s) 714, 2073, 2189, 2231, 2240, 2318
TscAI CASTG 5 cut(s) 993, 1074, 1273, 1864, 1942
TseFI GTSAC 4 cut(s) 1346, 1817, 1937, 1958
TseI GCWGC 2 cut(s) 493, 1466
Tsp45I GTSAC 4 cut(s) 1346, 1817, 1937, 1958
TspDTI ATGAA 7 cut(s) 159, 670, 722, 748, 853, 1094, 2312
TspGWI ACGGA 4 cut(s) 78, 1296, 1326, 1860
TspRI CASTG 5 cut(s) 993, 1074, 1273, 1864, 1942
Van91I CCANNNNNTGG 2 cut(s) 533, 1863
VpaK11BI GGWCC 4 cut(s) 33, 1049, 2004, 2123
XapI RAATTY 4 cut(s) 1031, 1054, 1173, 1705
XceI RCATGY 2 cut(s) 1582, 1774
XmiI GTMKAC 1 cut(s) 843
XmnI GAANNNNTTC 1 cut(s) 1502
XspI CTAG 5 cut(s) 234, 383, 437, 789, 1907
ZrmI AGTACT 2 cut(s) 646, 1462
Zsp2I ATGCAT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.