Rroxscaffold_2G00103890

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000083
Physical Location & Seq
Reverse (-)
26914023 .. 26918308
4286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00103890.1

Sequence Viewer

Length: 2637 bp
ATGATAATCAAGCATTTCCCATTTGCATTGCTTTCTGGGTTTGTTCTTATACTTTCAGTTCTTGCAGTAGATGATCAAACAGGCTTCATTAGCTTGGACTGTGGGCTACCAACAAATTCAAGCTACTCTGAGCCAGGATCAGGCATTGACTACATTTCAGATGAACCCTTTATTGACACCGGCGTAAGTAAAAGCATTGCGCCTGAATATAAAGCTACTCATCAGCAGCAAGCAGCTCATGTTCGTAGCTTTCCTCAATGGACCAGAAACTGTTACAGAGTGAACATTACAAGCGGTACTAAGTATTTGATCAGAGCAAGTTTTGTGTATGGGAACTATGATGGGCTAAATAAACTGCCAAAGTTTGATCTGCACATGGGACCTAGTTTCTGGGATTCAATCACACTAGCCAATGCAGCCGCGAGTACCATCAAAGAAGTCATTCATATTCCCTCATTAGACTACATTCATGTATGTCTTGTGAACACAGGCTCTGGAACACCATTCATTTCAGCATTGGAACTGAGGCCTTTAAAAAACACAACTTATATAACCAAAAGTGGTTCACTGGCAGTTGAGTATCGCTTGGATGTTGGTTCCCAAAGCAATCAATCATACAGGTATGACTACGACGTTTTTGATCGAATCTGGTTGCCTTTCAACTTCAATTTGTGGGGAGAGTTAAGTACCTCGCTTACGGTTGATTCCCTAATTCATAATGACTACCAAGTGCCATCTATAGTAATGAGTACTGCAGGCACTGCGATGAACTCTAGTACTCCCATGTATATCGGCTGGAATCCGCCAGATACAACTTCTGAATACTATGTGTATATGCACTTTGCTGAAATCCAGAAGTTGAAAGCCAACGAGTCCAGATCGTTCAATATCACCCTGAATGACAAGCTTTTTTATGGACCTCTAGTGCCAAGTTACTTGAGTACAATAACTATTTACAGCCCAGCAGCGTTAACAGGAGGAAATTTTACATTCTCACTCTTCAAAACTGAGAATTCAACACTGCCACCGATCCTCAATGCCATGGAGTACTTCAGAGTCATAGATTTCTCACAGTCGGAAACTAATCAAGACGATGTGGTTGCAATCACAAACATCAAGTCAACGTATGGAGTTGAGAAAAATTGGCAGGGAGATCCATGTGGTCCACAACAGTACGTCTGGGAAGGTCTAAACTGTAGCTTGGACGATCCCCCAAGAATCACATCCTTGGACTTGTCCTCGAGCGGATTGACAGGAGAAATAACTTCATATATATCCAATCTTGACATGTTACGATCTTTGGATTTATCTAACAATAGCTTAACTGGATCAGTACCTGAGTTTCTGTCTAAATTGCCAAACCTGAAAGTCCTTAACTTGGAAAAGAATAAGCTGAATGGTTCACTTCCAAGTACGCTTATCGAAAAATCGACAAGTGGATCACTATCCTTAAGGGTCGGAGAAAATGAAAACTTATGTGCAGCAATTTCATGCAAAAAGAAGAAAAACAATGTACTCATTCCAATAATAGCAGCAGTTGGTGGATTTGCTATTCTGTTTGTAGTATCAGTTGTCATATTATTTAGCATGAGAAGAAAAAGAAAACAAGTTGGAACAGCAGTGGCAGAGTCCAACATTCAAATGGATTCGTTAGAAAATTTCGAGTCCAAGAAGAAACAATTTACATACTCAGAGGTGCTGACGATTACTAACAACTTTCAGACAATTCTTGGGAAAGGTGGATTTGGACTGGTTTACCATGGCTATGTAGATGATACTCAAGTAGCTGTGAAAGTACTTTCTCCATCATCAGTTCAAGGATACCAACAATTTCAAGCAGAGGTCAAACTTCTTATGAGAGTTCATCATAGAAACTTGACTGGCCTTGTTGGATATTGCAATGAAGGAACGAACATGGCTCTCCTCTATGAATATATGGCCAATGGAAATTTGGAATCGCATCTCTTGGGTGAAGGTAGCAACGCAATTCTCTTGAATTGGGAAAGTCGACTTAGAATAGCGGCTGATGCAGCACAAGGACTGGAGTATCTTCACAATGGTAGTAAGCCACCTATTATCCACAGAGATGTGAAGACACCAAATATTTTGTTAGCCGAAAATTTCCACGCAAAGTTGGCTGATTTTGGCCTATCCAGAATGTTCCCAACTGACGAAGGCACTCATATGTCAACAGCTGTTGCTGGCACCCCTGGATACCTTGACCCTGAGTACCATATAACAGGCTGGTTGAATGAGAAGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTGCAGATAATAACTAGCCGACCTGTGATATCAAGAACAGCCCAAGTGAATAGTCATGTAAGTCAATGGGTTAGCTCCATGCTTTCTAATGGGGATATCAAAAGTATTGTTGATCCTAAGTTACGAGGAGATTTTGAAATCAACTCTGCGTGGAAGGCTGTTGAGTTGGCAAGGGATTGTATGTCCGAAATGTCAACTGGAAGGCCAAACATGAGTGAGGTGGTGACAAGACTCAAAGAGTGCTTGGGAGCAGAGTTGGCTCGAATAAATGAAAGTCGTGTGAGTGGAACAACCGATTCATCAATTGTGTTCTCCATGAATACTGGACTCAATCCTTCGGCGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

878

Amino Acids

97.0

Weight (kDa)

5.82

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 353 6.9e-121 Malectin-like domain
LRR_8 PF13855 405 - 465 4.2e-08 Leucine rich repeat
LRR_4 PF12799 431 - 467 8e-07 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 573 - 841 8.4e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 575 - 838 5.6e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2204
AccBSI CCGCTC 1 cut(s) 1245
AccI GTMKAC 1 cut(s) 2008
AccII CGCG 1 cut(s) 422
AciI CCGC 5 cut(s) 294, 420, 803, 1245, 2021
AclWI GGATC 7 cut(s) 145, 1024, 1148, 1202, 1336, 1447, 2396
AcoI YGGCCR 1 cut(s) 1938
AcsI RAATTY 6 cut(s) 115, 982, 1012, 1657, 1948, 2119
AcuI CTGAAG 1 cut(s) 1036
AfiI CCNNNNNNNGG 2 cut(s) 140, 1378
AflII CTTAAG 1 cut(s) 1450
AflIII ACRYGT 1 cut(s) 1287
AjnI CCWGG 2 cut(s) 133, 2209
AlwI GGATC 7 cut(s) 145, 1024, 1148, 1202, 1336, 1447, 2396
AlwNI CAGNNNCTG 4 cut(s) 270, 494, 761, 1337
Ama87I CYCGRG 1 cut(s) 1240
AoxI GGCC 5 cut(s) 527, 1882, 1938, 2146, 2492
ApeKI GCWGC 7 cut(s) 226, 233, 416, 965, 1481, 1532, 2030
ApoI RAATTY 6 cut(s) 115, 982, 1012, 1657, 1948, 2119
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 4 cut(s) 261, 380, 917, 1163
AsuHPI GGTGA 3 cut(s) 883, 1982, 2524
AvaI CYCGRG 1 cut(s) 1240
AvaII GGWCC 4 cut(s) 261, 380, 917, 1163
BaeI ACNNNNGTAYC 4 cut(s) 1767, 1800, 2030, 2063
BalI TGGCCA 1 cut(s) 1940
BanI GGYRCC 1 cut(s) 2204
BbsI GAAGAC 1 cut(s) 2099
BbvI GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
BccI CCATC 4 cut(s) 335, 437, 742, 1813
BcgI CGANNNNNNTGC 2 cut(s) 1082, 1116
BciT130I CCWGG 2 cut(s) 135, 2211
BciVI GTATCC 2 cut(s) 1814, 2207
BclI TGATCA 2 cut(s) 73, 309
BfaI CTAG 5 cut(s) 384, 407, 774, 923, 2304
BfmI CTRYAG 3 cut(s) 738, 753, 1195
BfrI CTTAAG 1 cut(s) 1450
BfuI GTATCC 2 cut(s) 1814, 2207
BisI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
BlsI GCNGC 9 cut(s) 228, 235, 418, 421, 967, 1483, 1534, 2023, 2032
BmcAI AGTACT 4 cut(s) 751, 778, 1049, 1797
Bme1390I CCNGG 2 cut(s) 135, 2211
Bme18I GGWCC 4 cut(s) 261, 380, 917, 1163
BmeT110I CYCGRG 1 cut(s) 1240
BmgT120I GGNCC 4 cut(s) 261, 380, 917, 1163
BmiI GGNNCC 3 cut(s) 381, 598, 2206
BmrFI CCNGG 2 cut(s) 135, 2211
BmsI GCATC 2 cut(s) 1969, 2017
BpiI GAAGAC 1 cut(s) 2099
BplI GAGNNNNNCTC 2 cut(s) 2271, 2303
BpmI CTGGAG 1 cut(s) 2063
BpuEI CTTGAG 2 cut(s) 958, 1764
BsaBI GATNNNNATC 1 cut(s) 1444
BsaJI CCNNGG 4 cut(s) 1041, 1227, 1759, 2209
Bsc4I CCNNNNNNNGG 2 cut(s) 140, 1378
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 7 cut(s) 573, 1330, 1755, 1885, 2046, 2491, 2617
Bse3DI GCAATG 3 cut(s) 26, 195, 1906
Bse8I GATNNNNATC 1 cut(s) 1444
BseBI CCWGG 2 cut(s) 135, 2211
BseDI CCNNGG 4 cut(s) 1041, 1227, 1759, 2209
BseGI GGATG 2 cut(s) 595, 1223
BseJI GATNNNNATC 1 cut(s) 1444
BseLI CCNNNNNNNGG 2 cut(s) 140, 1378
BseMI GCAATG 3 cut(s) 26, 195, 1906
BseMII CTCAG 6 cut(s) 120, 515, 999, 1329, 1704, 2217
BseNI ACTGG 7 cut(s) 573, 1330, 1755, 1885, 2046, 2491, 2617
BseRI GAGGAG 2 cut(s) 1913, 2430
BseXI GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
BseYI CCCAGC 1 cut(s) 961
BsgI GTGCAG 2 cut(s) 356, 1500
Bsh1236I CGCG 1 cut(s) 422
BshFI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BshNI GGYRCC 1 cut(s) 2204
BsiHKCI CYCGRG 1 cut(s) 1240
BsiSI CCGG 1 cut(s) 180
BslFI GGGAC 1 cut(s) 393
BslI CCNNNNNNNGG 2 cut(s) 140, 1378
BsmFI GGGAC 1 cut(s) 393
BsnI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BsoBI CYCGRG 1 cut(s) 1240
Bsp19I CCATGG 2 cut(s) 1041, 1759
BspACI CCGC 5 cut(s) 294, 420, 803, 1245, 2021
BspANI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BspCNI CTCAG 6 cut(s) 121, 516, 1000, 1330, 1703, 2218
BspFNI CGCG 1 cut(s) 422
BspLI GGNNCC 3 cut(s) 381, 598, 2206
BspMAI CTGCAG 1 cut(s) 757
BspPI GGATC 7 cut(s) 145, 1024, 1148, 1202, 1336, 1447, 2396
BspT107I GGYRCC 1 cut(s) 2204
BspTI CTTAAG 1 cut(s) 1450
BsrBI CCGCTC 1 cut(s) 1245
BsrDI GCAATG 3 cut(s) 26, 195, 1906
BsrFI RCCGGY 1 cut(s) 179
BsrI ACTGG 7 cut(s) 573, 1330, 1755, 1885, 2046, 2491, 2617
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 4 cut(s) 1041, 1227, 1759, 2209
BssT1I CCWWGG 3 cut(s) 1041, 1227, 1759
Bst2UI CCWGG 2 cut(s) 135, 2211
Bst4CI ACNGT 6 cut(s) 101, 272, 700, 1074, 1173, 1196
Bst6I CTCTTC 2 cut(s) 1004, 2252
BstAFI CTTAAG 1 cut(s) 1450
BstAPI GCANNNNNTGC 1 cut(s) 761
BstC8I GCNNGC 3 cut(s) 231, 757, 2203
BstDEI CTNAG 9 cut(s) 129, 300, 524, 1008, 1338, 1690, 2012, 2226, 2406
BstDSI CCRYGG 2 cut(s) 1041, 1759
BstF5I GGATG 2 cut(s) 595, 1223
BstFNI CGCG 1 cut(s) 422
BstHHI GCGC 1 cut(s) 202
BstMWI GCNNNNNNNGC 8 cut(s) 90, 416, 761, 2027, 2030, 2135, 2444, 2546
BstNI CCWGG 2 cut(s) 135, 2211
BstNSI RCATGY 1 cut(s) 1291
BstSCI CCNGG 2 cut(s) 133, 2209
BstSFI CTRYAG 3 cut(s) 738, 753, 1195
BstUI CGCG 1 cut(s) 422
BstV1I GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
BstV2I GAAGAC 1 cut(s) 2099
BstX2I RGATCY 1 cut(s) 1153
BstYI RGATCY 1 cut(s) 1153
BsuI GTATCC 2 cut(s) 1814, 2207
BsuRI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BtgI CCRYGG 2 cut(s) 1041, 1759
BtgZI GCGATG 1 cut(s) 779
BtsCI GGATG 2 cut(s) 595, 1223
BtsI GCAGTG 3 cut(s) 759, 1019, 1626
BtsIMutI CAGTG 4 cut(s) 566, 759, 1019, 1626
Cac8I GCNNGC 3 cut(s) 231, 757, 2203
CaiI CAGNNNCTG 4 cut(s) 270, 494, 761, 1337
CfoI GCGC 1 cut(s) 202
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 4 cut(s) 261, 380, 917, 1163
DdeI CTNAG 9 cut(s) 129, 300, 524, 1008, 1338, 1690, 2012, 2226, 2406
DraI TTTAAA 1 cut(s) 534
EaeI YGGCCR 1 cut(s) 1938
Eam1104I CTCTTC 2 cut(s) 1004, 2252
EarI CTCTTC 2 cut(s) 1004, 2252
EciI GGCGGA 1 cut(s) 792
Eco130I CCWWGG 3 cut(s) 1041, 1227, 1759
Eco147I AGGCCT 1 cut(s) 529
Eco32I GATATC 2 cut(s) 2319, 2386
Eco47I GGWCC 4 cut(s) 261, 380, 917, 1163
Eco57I CTGAAG 1 cut(s) 1036
Eco88I CYCGRG 1 cut(s) 1240
EcoO109I RGGNCCY 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 1012
EcoRII CCWGG 2 cut(s) 133, 2209
EcoRV GATATC 2 cut(s) 2319, 2386
EcoT14I CCWWGG 3 cut(s) 1041, 1227, 1759
ErhI CCWWGG 3 cut(s) 1041, 1227, 1759
FaqI GGGAC 1 cut(s) 393
FauNDI CATATG 1 cut(s) 2184
FbaI TGATCA 2 cut(s) 73, 309
FblI GTMKAC 1 cut(s) 2008
Fnu4HI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
FokI GGATG 2 cut(s) 602, 1210
Fsp4HI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
FspBI CTAG 5 cut(s) 384, 407, 774, 923, 2304
GlaI GCGC 1 cut(s) 201
GluI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
GsaI CCCAGC 1 cut(s) 965
GsuI CTGGAG 1 cut(s) 2063
HaeIII GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
HapII CCGG 1 cut(s) 180
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 5 cut(s) 972, 1122, 2009, 2190, 2484
HindII GTYRAC 5 cut(s) 972, 1122, 2009, 2190, 2484
HindIII AAGCTT 1 cut(s) 905
HpaI GTTAAC 1 cut(s) 972
HpaII CCGG 1 cut(s) 180
HphI GGTGA 3 cut(s) 883, 1982, 2524
Hpy188III TCNNGA 8 cut(s) 495, 853, 876, 1088, 1283, 1993, 2154, 2322
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 7 cut(s) 1178, 1898, 1967, 2168, 2437, 2484, 2634
HpyCH4III ACNGT 6 cut(s) 101, 272, 700, 1074, 1173, 1196
HpyCH4IV ACGT 3 cut(s) 633, 1124, 1176
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 416, 761, 2027, 2030, 2135, 2444, 2546
HpyF3I CTNAG 9 cut(s) 129, 300, 524, 1008, 1338, 1690, 2012, 2226, 2406
HpySE526I ACGT 3 cut(s) 633, 1124, 1176
HspAI GCGC 1 cut(s) 200
Ksp22I TGATCA 2 cut(s) 73, 309
KspAI GTTAAC 1 cut(s) 972
LmnI GCTCC 2 cut(s) 2369, 2537
Lsp1109I GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
LweI GCATC 2 cut(s) 1969, 2017
MaeI CTAG 5 cut(s) 384, 407, 774, 923, 2304
MaeII ACGT 3 cut(s) 633, 1124, 1176
MaeIII GTNAC 5 cut(s) 272, 932, 1290, 2409, 2512
MbiI CCGCTC 1 cut(s) 1245
MboII GAAGA 7 cut(s) 991, 1513, 1605, 1684, 2042, 2104, 2269
MfeI CAATTG 1 cut(s) 2592
MflI RGATCY 1 cut(s) 1153
MlsI TGGCCA 1 cut(s) 1940
MluNI TGGCCA 1 cut(s) 1940
MlyI GAGTC 6 cut(s) 881, 1065, 1637, 1673, 2514, 2610
MmeI TCCRAC 5 cut(s) 1056, 1438, 1591, 1656, 1870
Mox20I TGGCCA 1 cut(s) 1940
MroXI GAANNNNTTC 1 cut(s) 441
MscI TGGCCA 1 cut(s) 1940
MseI TTAA 6 cut(s) 533, 683, 971, 1322, 1374, 1451
MslI CAYNNNNRTG 5 cut(s) 764, 1640, 1764, 2085, 2183
Msp20I TGGCCA 1 cut(s) 1940
MspA1I CMGCKG 1 cut(s) 2195
MspCI CTTAAG 1 cut(s) 1450
MspI CCGG 1 cut(s) 180
MspR9I CCNGG 2 cut(s) 135, 2211
MunI CAATTG 1 cut(s) 2592
MvaI CCWGG 2 cut(s) 135, 2211
MvnI CGCG 1 cut(s) 422
MwoI GCNNNNNNNGC 8 cut(s) 90, 416, 761, 2027, 2030, 2135, 2444, 2546
NcoI CCATGG 2 cut(s) 1041, 1759
NdeI CATATG 1 cut(s) 2184
NlaIV GGNNCC 3 cut(s) 381, 598, 2206
NmuCI GTSAC 1 cut(s) 2512
NspI RCATGY 1 cut(s) 1291
PaeR7I CTCGAG 1 cut(s) 1240
PceI AGGCCT 1 cut(s) 529
PciI ACATGT 1 cut(s) 1287
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 8 cut(s) 395, 645, 704, 799, 1218, 1646, 1955, 2585
PkrI GCNGC 9 cut(s) 228, 235, 418, 421, 967, 1483, 1534, 2023, 2032
PleI GAGTC 6 cut(s) 880, 1064, 1636, 1672, 2514, 2610
PpsI GAGTC 6 cut(s) 880, 1064, 1636, 1672, 2514, 2610
PpuMI RGGWCCY 1 cut(s) 380
PscI ACATGT 1 cut(s) 1287
Psp5II RGGWCCY 1 cut(s) 380
Psp6I CCWGG 2 cut(s) 133, 2209
PspFI CCCAGC 1 cut(s) 961
PspGI CCWGG 2 cut(s) 133, 2209
PspN4I GGNNCC 3 cut(s) 381, 598, 2206
PspPI GGNCC 4 cut(s) 261, 380, 917, 1163
PspPPI RGGWCCY 1 cut(s) 380
PspXI VCTCGAGB 1 cut(s) 1240
PstI CTGCAG 1 cut(s) 757
PstNI CAGNNNCTG 4 cut(s) 270, 494, 761, 1337
PsuI RGATCY 1 cut(s) 1153
PvuII CAGCTG 1 cut(s) 2195
RseI CAYNNNNRTG 5 cut(s) 764, 1640, 1764, 2085, 2183
SalI GTCGAC 1 cut(s) 2007
SaqAI TTAA 6 cut(s) 533, 683, 971, 1322, 1374, 1451
SatI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
Sau96I GGNCC 4 cut(s) 261, 380, 917, 1163
ScaI AGTACT 4 cut(s) 751, 778, 1049, 1797
SchI GAGTC 6 cut(s) 881, 1065, 1637, 1673, 2514, 2610
ScrFI CCNGG 2 cut(s) 135, 2211
SfaNI GCATC 2 cut(s) 1969, 2017
SfcI CTRYAG 3 cut(s) 738, 753, 1195
Sfr274I CTCGAG 1 cut(s) 1240
SgrAI CRCCGGYG 1 cut(s) 179
SinI GGWCC 4 cut(s) 261, 380, 917, 1163
SlaI CTCGAG 1 cut(s) 1240
SmiMI CAYNNNNRTG 5 cut(s) 764, 1640, 1764, 2085, 2183
SmlI CTYRAG 4 cut(s) 937, 1240, 1450, 1779
SmoI CTYRAG 4 cut(s) 937, 1240, 1450, 1779
SseBI AGGCCT 1 cut(s) 529
SsiI CCGC 5 cut(s) 294, 420, 803, 1245, 2021
SspI AATATT 1 cut(s) 2104
SspMI CTAG 5 cut(s) 384, 407, 774, 923, 2304
StuI AGGCCT 1 cut(s) 529
StyD4I CCNGG 2 cut(s) 133, 2209
StyI CCWWGG 3 cut(s) 1041, 1227, 1759
TaaI ACNGT 6 cut(s) 101, 272, 700, 1074, 1173, 1196
TaiI ACGT 3 cut(s) 636, 1127, 1179
TaqI TCGA 7 cut(s) 643, 1241, 1422, 1430, 1662, 2008, 2551
TatI WGTACW 6 cut(s) 749, 776, 941, 1047, 1513, 1795
TauI GCSGC 2 cut(s) 422, 2024
TfiI GAWTC 8 cut(s) 395, 645, 704, 799, 1218, 1646, 1955, 2585
Tru1I TTAA 6 cut(s) 533, 683, 971, 1322, 1374, 1451
Tru9I TTAA 6 cut(s) 533, 683, 971, 1322, 1374, 1451
TscAI CASTG 4 cut(s) 573, 766, 1026, 1626
TseFI GTSAC 1 cut(s) 2512
TseI GCWGC 7 cut(s) 226, 233, 416, 965, 1481, 1532, 2030
Tsp45I GTSAC 1 cut(s) 2512
TspRI CASTG 4 cut(s) 573, 766, 1026, 1626
Vha464I CTTAAG 1 cut(s) 1450
VpaK11BI GGWCC 4 cut(s) 261, 380, 917, 1163
XapI RAATTY 6 cut(s) 115, 982, 1012, 1657, 1948, 2119
XceI RCATGY 1 cut(s) 1291
XcmI CCANNNNNNNNNTGG 2 cut(s) 1639, 1948
XhoI CTCGAG 1 cut(s) 1240
XmiI GTMKAC 1 cut(s) 2008
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 5 cut(s) 384, 407, 774, 923, 2304
ZrmI AGTACT 4 cut(s) 751, 778, 1049, 1797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.