Rh2BG428500

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000083
Physical Location & Seq
Reverse (-)
60444062 .. 60452486
8425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG428500.1

Sequence Viewer

Length: 1320 bp
ATGTCAGGGATTTTCAAGCAATTCCTGGCTCCACTGCTTGCTGGTTTTGCTCTTATGCTCTTAGTTCATGCGCAGGATCAAACAGGCTCCGGTGTTCCATTTATATCAACAATAGAACTGAGGCCTTTGCCGTATAGTACTTATCAAACACAAACAGGGTCCTTGGCACTTGACACACGACTTGACACAGGTCAAATAGCACCTAATCTAACTTCATACAGGTATCCATTTGATATGCATGATCGATTCTGGTACGGTTATAGCCGCGAACATTGGACACAATTAAGTACCGCATCGACCATTGACCTCAATCAAAACGACTTTTACCAGCCAGCATCTGATGTTATGCGTACTGCTGCCACGCCGAAACTTGCAACTGATGACTTGAGTTTCTTCTGGCTGCCTGCTGATAAAAATGCAGAATATTATGTTTACATGCACTTTGCAGAAATTGAAGAACTCTCAGCTAACCAGTCTAGACAGCTTGAAATTACCATGAACGGAGAACTGTTTTATGGACCATTTGCTCCTGGTTACTTGAAGACATTTACTGTTTGGAGCGCTAAGGCAATGAGTGGAGGACAATACAACTTTTCAGTCATAAAGGGAGCTGGCAACTCTGACCTTCAACCTATCCTTAATGCCATCGAGATTTATACAGTAAAAGAATTCTCAGAACAAGAAACAAACCAAGATGATGTTAACGCAATCACAAATATCAAAGTATCATATAAAATTGAGAAGAATTGGCAAGGAGATCCCTGTTTCCCAAAGAATTACTCATGGAAAGGTCTCAACTGTAGCTATTCTCCAAATGATTCACCGAGAATCATATACTTGGACTTGTCATCGAGTGGATTAACAGGGGAAATAGATGCTTCTATATCCAATCTCGCAATGATACAGACTTTCCCACACGGGCCTCCACCCCAACCCACCTGCACGCGGCATCCCCTAGCAGTCCAACGCCTGCAACAGCGCTACTCCCTACCGGCCTCCAACGCGCGTCCCACAGCCCACACAGACCTCACTGCAGACTCGCGCCCAGCAGCCCATCCCAGCACCTATCCGGCGATCCCTACAGCACCATACCCCTGCCTTGCAAGCGCAGTCTTCCTTCTGCAGCCTGCAACACACAGCCAGATCGCACCGTCCGGCCTCGTGCTCGGCACCACAGTAACAGAGCAGCACAGCCCATGCCCACATCACCAGACACTCAGCCTAGCCGTAGACCAGAGAACACGCCCGGTTCATGAACGATGGGCCTTCCATAAGCCCGGTGTCATATCCGTCCCGGGTTGCTCTGTTGCAGGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

439

Amino Acids

48.68

Weight (kDa)

6.04

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 27 - 221 2.8e-52 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 947
Acc16I TGCGCA 1 cut(s) 72
Acc36I ACCTGC 1 cut(s) 947
AccB1I GGYRCC 1 cut(s) 1169
AccI GTMKAC 1 cut(s) 1230
AccII CGCG 5 cut(s) 267, 946, 1004, 1006, 1042
AciI CCGC 3 cut(s) 265, 291, 946
AclWI GGATC 3 cut(s) 84, 752, 1069
AcsI RAATTY 1 cut(s) 668
AfaI GTAC 4 cut(s) 139, 254, 289, 352
AfeI AGCGCT 2 cut(s) 562, 980
AfiI CCNNNNNNNGG 1 cut(s) 945
AgsI TTSAA 5 cut(s) 16, 455, 488, 541, 629
AjnI CCWGG 2 cut(s) 24, 529
AluBI AGCT 4 cut(s) 467, 484, 611, 804
AluI AGCT 4 cut(s) 467, 484, 611, 804
Alw21I GWGCWC 1 cut(s) 1167
Alw26I GTCTC 1 cut(s) 797
AlwI GGATC 3 cut(s) 84, 752, 1069
AlwNI CAGNNNCTG 1 cut(s) 338
Ama87I CYCGRG 1 cut(s) 1294
Aor51HI AGCGCT 2 cut(s) 562, 980
AoxI GGCC 5 cut(s) 122, 920, 993, 1156, 1263
ApeKI GCWGC 5 cut(s) 356, 400, 1049, 1123, 1186
ApoI RAATTY 1 cut(s) 668
AspLEI GCGC 6 cut(s) 73, 563, 981, 1006, 1044, 1109
AspS9I GGNCC 4 cut(s) 159, 518, 920, 1263
AsuC2I CCSGG 4 cut(s) 1247, 1278, 1295, 1296
AsuHPI GGTGA 2 cut(s) 813, 1199
AvaI CYCGRG 1 cut(s) 1294
AvaII GGWCC 2 cut(s) 159, 518
BanI GGYRCC 1 cut(s) 1169
BauI CACGAG 1 cut(s) 1160
BbsI GAAGAC 2 cut(s) 548, 1105
Bbv12I GWGCWC 1 cut(s) 1167
BbvI GCAGC 5 cut(s) 343, 387, 1061, 1135, 1198
BccI CCATC 3 cut(s) 653, 1062, 1254
BceAI ACGGC 2 cut(s) 115, 1211
BciT130I CCWGG 2 cut(s) 26, 531
BciVI GTATCC 1 cut(s) 234
BcnI CCSGG 4 cut(s) 1247, 1278, 1295, 1296
BcoDI GTCTC 1 cut(s) 797
BfaI CTAG 3 cut(s) 477, 956, 1223
BfmI CTRYAG 4 cut(s) 799, 1032, 1080, 1121
BfoI RGCGCY 2 cut(s) 564, 982
BfuAI ACCTGC 1 cut(s) 947
BfuI GTATCC 1 cut(s) 234
BisI GCNGC 7 cut(s) 265, 357, 401, 947, 1050, 1124, 1187
BlsI GCNGC 7 cut(s) 266, 358, 402, 948, 1051, 1125, 1188
BmcAI AGTACT 1 cut(s) 139
Bme1390I CCNGG 6 cut(s) 26, 531, 1247, 1278, 1295, 1296
Bme18I GGWCC 2 cut(s) 159, 518
BmeT110I CYCGRG 1 cut(s) 1294
BmgT120I GGNCC 4 cut(s) 159, 518, 920, 1263
BmiI GGNNCC 4 cut(s) 30, 88, 160, 1171
BmrFI CCNGG 6 cut(s) 26, 531, 1247, 1278, 1295, 1296
BmsI GCATC 4 cut(s) 302, 344, 865, 958
BoxI GACNNNNGTC 1 cut(s) 189
BpiI GAAGAC 2 cut(s) 548, 1105
Bpu10I CCTNAGC 1 cut(s) 564
BpuEI CTTGAG 1 cut(s) 406
BpuMI CCSGG 4 cut(s) 1247, 1278, 1295, 1296
Bsa29I ATCGAT 1 cut(s) 244
BsaI GGTCTC 1 cut(s) 797
BsaJI CCNNGG 2 cut(s) 162, 1294
BsaWI WCCGGW 1 cut(s) 89
Bsc4I CCNNNNNNNGG 1 cut(s) 945
Bse118I RCCGGY 1 cut(s) 991
Bse1I ACTGG 1 cut(s) 472
Bse3DI GCAATG 2 cut(s) 576, 903
BseBI CCWGG 2 cut(s) 26, 531
BseCI ATCGAT 1 cut(s) 244
BseDI CCNNGG 2 cut(s) 162, 1294
BseGI GGATG 2 cut(s) 949, 1054
BseLI CCNNNNNNNGG 1 cut(s) 945
BseMI GCAATG 2 cut(s) 576, 903
BseMII CTCAG 4 cut(s) 110, 477, 687, 1231
BseNI ACTGG 1 cut(s) 472
BseXI GCAGC 5 cut(s) 343, 387, 1061, 1135, 1198
BseYI CCCAGC 2 cut(s) 1045, 1058
BsgI GTGCAG 1 cut(s) 925
Bsh1236I CGCG 5 cut(s) 267, 946, 1004, 1006, 1042
BshFI GGCC 5 cut(s) 124, 922, 995, 1158, 1265
BshNI GGYRCC 1 cut(s) 1169
BshVI ATCGAT 1 cut(s) 244
BsiHKAI GWGCWC 1 cut(s) 1167
BsiHKCI CYCGRG 1 cut(s) 1294
BsiSI CCGG 7 cut(s) 90, 992, 1070, 1155, 1247, 1278, 1295
BslFI GGGAC 2 cut(s) 993, 1277
BslI CCNNNNNNNGG 1 cut(s) 945
BsmAI GTCTC 1 cut(s) 797
BsmFI GGGAC 2 cut(s) 993, 1277
BsnI GGCC 5 cut(s) 124, 922, 995, 1158, 1265
Bso31I GGTCTC 1 cut(s) 797
BsoBI CYCGRG 1 cut(s) 1294
Bsp1286I GDGCHC 1 cut(s) 1167
Bsp143I GATC 5 cut(s) 76, 241, 757, 1074, 1143
BspACI CCGC 3 cut(s) 265, 291, 946
BspANI GGCC 5 cut(s) 124, 922, 995, 1158, 1265
BspCNI CTCAG 4 cut(s) 111, 476, 686, 1230
BspDI ATCGAT 1 cut(s) 244
BspFNI CGCG 5 cut(s) 267, 946, 1004, 1006, 1042
BspHI TCATGA 1 cut(s) 1252
BspLI GGNNCC 4 cut(s) 30, 88, 160, 1171
BspMAI CTGCAG 2 cut(s) 1036, 1125
BspMI ACCTGC 1 cut(s) 947
BspPI GGATC 3 cut(s) 84, 752, 1069
BspT107I GGYRCC 1 cut(s) 1169
BspTNI GGTCTC 1 cut(s) 797
BsrDI GCAATG 2 cut(s) 576, 903
BsrFI RCCGGY 1 cut(s) 991
BsrI ACTGG 1 cut(s) 472
BssAI RCCGGY 1 cut(s) 991
BssECI CCNNGG 2 cut(s) 162, 1294
BssMI GATC 5 cut(s) 76, 241, 757, 1074, 1143
BssSI CACGAG 1 cut(s) 1160
BssT1I CCWWGG 1 cut(s) 162
Bst2BI CACGAG 1 cut(s) 1160
Bst2UI CCWGG 2 cut(s) 26, 531
Bst4CI ACNGT 7 cut(s) 257, 510, 553, 661, 800, 1152, 1177
BstC8I GCNNGC 8 cut(s) 39, 333, 405, 613, 944, 971, 1105, 1128
BstDEI CTNAG 6 cut(s) 61, 119, 463, 564, 673, 1217
BstF5I GGATG 2 cut(s) 949, 1054
BstFNI CGCG 5 cut(s) 267, 946, 1004, 1006, 1042
BstH2I RGCGCY 2 cut(s) 564, 982
BstHHI GCGC 6 cut(s) 73, 563, 981, 1006, 1044, 1109
BstKTI GATC 5 cut(s) 79, 244, 760, 1077, 1146
BstMAI GTCTC 1 cut(s) 797
BstMBI GATC 5 cut(s) 76, 241, 757, 1074, 1143
BstMWI GCNNNNNNNGC 3 cut(s) 47, 1001, 1104
BstNI CCWGG 2 cut(s) 26, 531
BstNSI RCATGY 1 cut(s) 439
BstPAI GACNNNNGTC 1 cut(s) 189
BstSCI CCNGG 6 cut(s) 24, 529, 1245, 1276, 1293, 1294
BstSFI CTRYAG 4 cut(s) 799, 1032, 1080, 1121
BstUI CGCG 5 cut(s) 267, 946, 1004, 1006, 1042
BstV1I GCAGC 5 cut(s) 343, 387, 1061, 1135, 1198
BstV2I GAAGAC 2 cut(s) 548, 1105
BstX2I RGATCY 1 cut(s) 757
BstYI RGATCY 1 cut(s) 757
Bsu15I ATCGAT 1 cut(s) 244
BsuI GTATCC 1 cut(s) 234
BsuRI GGCC 5 cut(s) 124, 922, 995, 1158, 1265
BsuTUI ATCGAT 1 cut(s) 244
BtsCI GGATG 2 cut(s) 949, 1054
BtsI GCAGTG 2 cut(s) 32, 1029
BtsIMutI CAGTG 2 cut(s) 32, 1029
BveI ACCTGC 1 cut(s) 947
Cac8I GCNNGC 8 cut(s) 39, 333, 405, 613, 944, 971, 1105, 1128
CaiI CAGNNNCTG 1 cut(s) 338
CciI TCATGA 1 cut(s) 1252
CfoI GCGC 6 cut(s) 73, 563, 981, 1006, 1044, 1109
Cfr10I RCCGGY 1 cut(s) 991
Cfr13I GGNCC 4 cut(s) 159, 518, 920, 1263
Cfr9I CCCGGG 1 cut(s) 1294
ClaI ATCGAT 1 cut(s) 244
CseI GACGC 1 cut(s) 995
Csp6I GTAC 4 cut(s) 138, 253, 288, 351
CviAII CATG 7 cut(s) 68, 239, 436, 496, 783, 1197, 1253
CviQI GTAC 4 cut(s) 138, 253, 288, 351
DdeI CTNAG 6 cut(s) 61, 119, 463, 564, 673, 1217
DpnI GATC 5 cut(s) 78, 243, 759, 1076, 1145
DpnII GATC 5 cut(s) 76, 241, 757, 1074, 1143
Eco130I CCWWGG 1 cut(s) 162
Eco147I AGGCCT 1 cut(s) 124
Eco31I GGTCTC 1 cut(s) 797
Eco47I GGWCC 2 cut(s) 159, 518
Eco47III AGCGCT 2 cut(s) 562, 980
Eco88I CYCGRG 1 cut(s) 1294
EcoO109I RGGNCCY 1 cut(s) 159
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 2 cut(s) 24, 529
EcoT14I CCWWGG 1 cut(s) 162
EcoT22I ATGCAT 1 cut(s) 240
ErhI CCWWGG 1 cut(s) 162
FaeI CATG 7 cut(s) 71, 242, 439, 499, 786, 1200, 1256
FaqI GGGAC 2 cut(s) 993, 1277
FatI CATG 7 cut(s) 67, 238, 435, 495, 782, 1196, 1252
FblI GTMKAC 1 cut(s) 1230
Fnu4HI GCNGC 7 cut(s) 265, 357, 401, 947, 1050, 1124, 1187
FokI GGATG 2 cut(s) 936, 1041
Fsp4HI GCNGC 7 cut(s) 265, 357, 401, 947, 1050, 1124, 1187
FspBI CTAG 3 cut(s) 477, 956, 1223
FspI TGCGCA 1 cut(s) 72
GlaI GCGC 6 cut(s) 72, 562, 980, 1005, 1043, 1108
GluI GCNGC 7 cut(s) 265, 357, 401, 947, 1050, 1124, 1187
GsaI CCCAGC 2 cut(s) 1049, 1062
HaeII RGCGCY 2 cut(s) 564, 982
HaeIII GGCC 5 cut(s) 124, 922, 995, 1158, 1265
HapII CCGG 7 cut(s) 90, 992, 1070, 1155, 1247, 1278, 1295
HgaI GACGC 1 cut(s) 995
HhaI GCGC 6 cut(s) 73, 563, 981, 1006, 1044, 1109
Hin1II CATG 7 cut(s) 71, 242, 439, 499, 786, 1200, 1256
Hin6I GCGC 6 cut(s) 71, 561, 979, 1004, 1042, 1107
HinP1I GCGC 6 cut(s) 71, 561, 979, 1004, 1042, 1107
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HinfI GANTC 4 cut(s) 246, 818, 828, 1037
HpaI GTTAAC 1 cut(s) 703
HpaII CCGG 7 cut(s) 90, 992, 1070, 1155, 1247, 1278, 1295
HphI GGTGA 2 cut(s) 813, 1199
Hpy166II GTNNAC 3 cut(s) 433, 703, 1231
Hpy188I TCNGA 3 cut(s) 340, 622, 676
Hpy188III TCNNGA 3 cut(s) 477, 649, 1253
Hpy8I GTNNAC 3 cut(s) 433, 703, 1231
HpyAV CCTTC 3 cut(s) 635, 1127, 1276
HpyCH4III ACNGT 7 cut(s) 257, 510, 553, 661, 800, 1152, 1177
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 1001, 1104
HpyF3I CTNAG 6 cut(s) 61, 119, 463, 564, 673, 1217
Hsp92II CATG 7 cut(s) 71, 242, 439, 499, 786, 1200, 1256
HspAI GCGC 6 cut(s) 71, 561, 979, 1004, 1042, 1107
KspAI GTTAAC 1 cut(s) 703
Kzo9I GATC 5 cut(s) 76, 241, 757, 1074, 1143
LmnI GCTCC 5 cut(s) 34, 92, 532, 558, 608
Lsp1109I GCAGC 5 cut(s) 343, 387, 1061, 1135, 1198
LweI GCATC 4 cut(s) 302, 344, 865, 958
MaeI CTAG 3 cut(s) 477, 956, 1223
MaeIII GTNAC 2 cut(s) 533, 1177
MalI GATC 5 cut(s) 78, 243, 759, 1076, 1145
MboI GATC 5 cut(s) 76, 241, 757, 1074, 1143
MboII GAAGA 5 cut(s) 385, 467, 553, 754, 1105
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 1 cut(s) 1167
MluCI AATT 8 cut(s) 20, 281, 450, 489, 668, 735, 745, 775
MlyI GAGTC 1 cut(s) 1031
MmeI TCCRAC 2 cut(s) 988, 1023
MnlI CCTC 7 cut(s) 114, 317, 572, 933, 1006, 1037, 1169
Mph1103I ATGCAT 1 cut(s) 240
MseI TTAA 4 cut(s) 284, 639, 702, 860
MspI CCGG 7 cut(s) 90, 992, 1070, 1155, 1247, 1278, 1295
MspR9I CCNGG 6 cut(s) 26, 531, 1247, 1278, 1295, 1296
MvaI CCWGG 2 cut(s) 26, 531
MvnI CGCG 5 cut(s) 267, 946, 1004, 1006, 1042
MwoI GCNNNNNNNGC 3 cut(s) 47, 1001, 1104
NciI CCSGG 4 cut(s) 1247, 1278, 1295, 1296
NdeII GATC 5 cut(s) 76, 241, 757, 1074, 1143
NlaIII CATG 7 cut(s) 71, 242, 439, 499, 786, 1200, 1256
NlaIV GGNNCC 4 cut(s) 30, 88, 160, 1171
NmeAIII GCCGAG 1 cut(s) 1146
NsbI TGCGCA 1 cut(s) 72
NsiI ATGCAT 1 cut(s) 240
NspI RCATGY 1 cut(s) 439
PagI TCATGA 1 cut(s) 1252
PaqCI CACCTGC 1 cut(s) 947
PceI AGGCCT 1 cut(s) 124
PfeI GAWTC 3 cut(s) 246, 818, 828
PkrI GCNGC 7 cut(s) 266, 358, 402, 948, 1051, 1125, 1188
PleI GAGTC 1 cut(s) 1031
PpsI GAGTC 1 cut(s) 1031
PpuMI RGGWCCY 1 cut(s) 159
PshAI GACNNNNGTC 1 cut(s) 189
Psp5II RGGWCCY 1 cut(s) 159
Psp6I CCWGG 2 cut(s) 24, 529
PspFI CCCAGC 2 cut(s) 1045, 1058
PspGI CCWGG 2 cut(s) 24, 529
PspN4I GGNNCC 4 cut(s) 30, 88, 160, 1171
PspPI GGNCC 4 cut(s) 159, 518, 920, 1263
PspPPI RGGWCCY 1 cut(s) 159
PstI CTGCAG 2 cut(s) 1036, 1125
PstNI CAGNNNCTG 1 cut(s) 338
PsuI RGATCY 1 cut(s) 757
RsaI GTAC 4 cut(s) 139, 254, 289, 352
RsaNI GTAC 4 cut(s) 138, 253, 288, 351
SaqAI TTAA 4 cut(s) 284, 639, 702, 860
SatI GCNGC 7 cut(s) 265, 357, 401, 947, 1050, 1124, 1187
Sau3AI GATC 5 cut(s) 76, 241, 757, 1074, 1143
Sau96I GGNCC 4 cut(s) 159, 518, 920, 1263
ScaI AGTACT 1 cut(s) 139
SchI GAGTC 1 cut(s) 1031
ScrFI CCNGG 6 cut(s) 26, 531, 1247, 1278, 1295, 1296
SduI GDGCHC 1 cut(s) 1167
SfaNI GCATC 4 cut(s) 302, 344, 865, 958
SfcI CTRYAG 4 cut(s) 799, 1032, 1080, 1121
SinI GGWCC 2 cut(s) 159, 518
SmaI CCCGGG 1 cut(s) 1296
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
Sse9I AATT 8 cut(s) 20, 281, 450, 489, 668, 735, 745, 775
SseBI AGGCCT 1 cut(s) 124
SsiI CCGC 3 cut(s) 265, 291, 946
SspI AATATT 1 cut(s) 425
SspMI CTAG 3 cut(s) 477, 956, 1223
StuI AGGCCT 1 cut(s) 124
StyD4I CCNGG 6 cut(s) 24, 529, 1245, 1276, 1293, 1294
StyI CCWWGG 1 cut(s) 162
TaaI ACNGT 7 cut(s) 257, 510, 553, 661, 800, 1152, 1177
TaqI TCGA 4 cut(s) 244, 296, 648, 851
TasI AATT 8 cut(s) 20, 281, 450, 489, 668, 735, 745, 775
TatI WGTACW 1 cut(s) 137
TauI GCSGC 2 cut(s) 267, 949
TfiI GAWTC 3 cut(s) 246, 818, 828
Tru1I TTAA 4 cut(s) 284, 639, 702, 860
Tru9I TTAA 4 cut(s) 284, 639, 702, 860
TscAI CASTG 2 cut(s) 39, 1036
TseI GCWGC 5 cut(s) 356, 400, 1049, 1123, 1186
TspDTI ATGAA 5 cut(s) 56, 204, 512, 1241, 1269
TspGWI ACGGA 2 cut(s) 516, 1279
TspMI CCCGGG 1 cut(s) 1294
TspRI CASTG 2 cut(s) 39, 1036
VpaK11BI GGWCC 2 cut(s) 159, 518
XapI RAATTY 1 cut(s) 668
XbaI TCTAGA 1 cut(s) 476
XceI RCATGY 1 cut(s) 439
XmaI CCCGGG 1 cut(s) 1294
XmiI GTMKAC 1 cut(s) 1230
XspI CTAG 3 cut(s) 477, 956, 1223
ZrmI AGTACT 1 cut(s) 139
Zsp2I ATGCAT 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.