Prupe.3G055400_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3923294 .. 3927264
3971 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G055400.1

Sequence Viewer

Length: 2667 bp
ATGTCGTGGACATTCAAGCACATCCTCTTTCTGCTTGCTGGTTTCGCTCTTAATCTGATGCTGCTTGTTCATTCCCAAGATGGTCAATCAGGGTTCATTAGCATAGATTGCGGCCTCCAGACAGATTCAGGTTATTCTGAAAAGAGAACTGGCATTAACTACATTTCTGACGCAACCTTCATAGACACCGGTGAAAGTAAATTCACATTGCCTAGTCAAAGAGATGACTATCAACAGCCATACTGGTCTGTTAGGAGCTTCCCCGAAGGAGCCAGGAATTGCTACAAGATAAATGTTACACGCGGCAACAAATATTTGATCCGAGCAAGTTTCGTATATGGGAATTATGATGGCCAAGATAAGATACCAGAATTTGAACTGCACCTTGGACCTAATTTGTGGGATACGGTTAGGTTTGAAAATGCCTCCGATGCAGACACAGACAAAGAGCTCATATATGTCCCACTCCGAAACTATATACATGTTTGTTTGGTGAACACAGGCTCTGGGGTTCCATTTATATCTGCTCTAGAACTCAGGCCTTTACCTAATGCATCTTATGAAACGAAAACGGGGTCATTGGCATTTGTCTCCCGATATGACACGGGCCAAAGTCCTAATACGCTAACTAGGTATCCAGTCGATATTCTTGACCGATTCTGGGGTGCCTATAATGACCTCAATGATTGGACACAATTAAACACCTCATCCACCATCGACTCCGAATCTGACCAACTGTACCAACTTCCATCTGTTGTTATGAGTACTGCTTCAACGCCAAAAAATCCAAGTGATTCCTTGAGTATTATTCTCTCGTTGCCAGACAAAGATGCTGAATATTACAGTTACCTACACTTCGCAGAAGTTGAAAGCCTCCAACTTAACCAATCTAGATTGCAATACGTTTATAGGGACGGAGGCCACCATTATGGGCCATTTGCTCCTCAATACTTGTCAACAAATACCATTTACAGCACTAACGCTTGGAGCACTGGTGGAGACGATGTTACTTTTTCAATTACCAGGGCTGAGAACTCTACCCTTCCACCTATCCTCAATGCTATCGAGATTTATATGGTTAAACAGTTCGTAGAAGCAGAAACAAACCAAGAAGATGTTGACGCAATCGCATCGATCAAGTCAACTTATAATATTAAAAGAAATTGGCAAGGAGATCCATGTGCCCCTCAAGATTACGTTTGGCAAGGAGTAAAGTGTAACTATCAAGAATTTGAGTTACCAAGAATCATATCCTTGAACTTGTCCTCGAGTAGCTTAACAGGGGAGATAGCTGCTTCTATATCCAATCTCACAATGATACAGTCTTTGGATCTATCAAACAACAACTTAACAGGACCAATTCCAGAATTTTTGTCAAAATTCCAGCATTTGACTGTCCTAAACTTGGAGAAAAACAAGTTCACAGGCTCGGTTCCAGTAGGACTGATTGAAAGAAAGAATAATGGTTTACTATCACTAAGTTTGTGCGAAAATCCAAATCTTTCCGGACATGATTCTTGCAAATTAAAGAAGCAGCAAAATTTGGTTATTCCCGTAGTAGTGCCAATTGCTGGCATCCTCTTCTTAGTTGTAGCAGCTATCTGGTGGTGGTGGAGCCTCAAAAGTAAAAGGCAACATGGTAAGACTTCCAATATTTTGGAGATAACTGATGAAGACTTGAGGTATGGGTCATTAGAATCAACAAAGCGACAGTTTACGTATTCTGAGATACTAATGATGACCAACAACTTCGAGAGGGTCCTTGGCAAAGGTGGATTTGGAACAGTTTATCATGGCTACATGGAACATACTCAAGTAGCTATAAAGATGCTTTCACCATCATCTGTTCAAGGGTTCCAGCAATTTCATGCAGAGGTTTCTCTTCTTATGAGAGTTCATCATAAAAACTTGACAAGCCTTGTCGGATATTGCAATGATGAAACCAACGTAGGGCTTGTCTACGAGTATATGGCCAATGGAAACTTATTAGATCATCTTTCAGATAGCATATCAAGTATCTTGACTTGGGAAGATAGACTTCGAATAGCAACAGATGCTGCACAAGGGTTGGAGTATCTGCACTGTGGTTGTAAGCCACCGATAATGCACAGGGATGTAAAATCAACAAACATCTTGCTGAATGAAAATTTCCAAGCTAAAATATCTGATTTTGGCCTATCCAGAAAACTCCTTACTCATGATGGAACTCATGCATCCAGCCTTCTTGCTGGCACTCCTGGCTACCTTGATCCTGAGTTCTACCTATCAAACAGGTTAAATGAGAAAAGTGACGTTTATAGCTTTGGGGTTGTGTTGTTGGAGATTATCACATGTAGACCGGTTATAACGAGGACACATGAGAGAATTCACATTAGTCAATGGGTTGGTTTCATGCTAGCAAATGGTGACATTAACAGCATTGTCGATCCGAGGTTGGAGGGAAATTTCAATACCAACTCCGTCTGGAAAGCTGTGGAAATAGCAATGGCATGTGTATCCACAAATGCAATCAAAAGGCCTAGCATGAGTCAGGTGGTGGTGGATTTGAAGGAGTGTTTGGCAACAGAGTATGCTCGAACAAAACATAGCCGTGTAGGTCAATTTGAAAATCCCAATGGGTTAATGCCTGACAATTCGATCGCTAGGCTAACCCCCTCTGTCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

889

Amino Acids

99.76

Weight (kDa)

5.63

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1149, 2345
AccB1I GGYRCC 1 cut(s) 665
AccB7I CCANNNNNTGG 1 cut(s) 1571
AccI GTMKAC 2 cut(s) 1959, 2335
AccII CGCG 1 cut(s) 303
AccIII TCCGGA 1 cut(s) 1505
AciI CCGC 2 cut(s) 111, 303
AclWI GGATC 5 cut(s) 313, 1169, 1338, 2243, 2420
AcoI YGGCCR 2 cut(s) 352, 1971
AcsI RAATTY 9 cut(s) 200, 371, 1229, 1367, 1379, 1540, 2146, 2364, 2443
AfaI GTAC 2 cut(s) 740, 766
AfiI CCNNNNNNNGG 5 cut(s) 661, 1405, 1571, 1950, 2661
AflIII ACRYGT 2 cut(s) 481, 2330
AgeI ACCGGT 2 cut(s) 188, 2338
AjnI CCWGG 3 cut(s) 272, 1022, 2236
AjuI GAANNNNNNNTTGG 4 cut(s) 369, 401, 2540, 2572
AluBI AGCT 9 cut(s) 258, 451, 1275, 1292, 1598, 1820, 2156, 2301, 2471
AluI AGCT 9 cut(s) 258, 451, 1275, 1292, 1598, 1820, 2156, 2301, 2471
Alw21I GWGCWC 2 cut(s) 453, 992
Alw26I GTCTC 2 cut(s) 595, 993
AlwI GGATC 5 cut(s) 313, 1169, 1338, 2243, 2420
AlwNI CAGNNNCTG 2 cut(s) 506, 2057
Ama87I CYCGRG 1 cut(s) 1267
Aor13HI TCCGGA 1 cut(s) 1505
AoxI GGCC 9 cut(s) 112, 352, 539, 607, 919, 932, 1971, 2173, 2516
ApeKI GCWGC 5 cut(s) 61, 1292, 1534, 1595, 2057
ApoI RAATTY 9 cut(s) 200, 371, 1229, 1367, 1379, 1540, 2146, 2364, 2443
ArsI GACNNNNNNTTYG 2 cut(s) 560, 592
AsiGI ACCGGT 2 cut(s) 188, 2338
AspS9I GGNCC 5 cut(s) 389, 607, 932, 1355, 1759
AsuHPI GGTGA 4 cut(s) 203, 505, 1827, 2417
AsuII TTCGAA 1 cut(s) 2041
AsuNHI GCTAGC 1 cut(s) 2395
AvaI CYCGRG 1 cut(s) 1267
AvaII GGWCC 3 cut(s) 389, 1355, 1759
BaeGI GKGCMC 1 cut(s) 1186
BalI TGGCCA 2 cut(s) 354, 1973
BanI GGYRCC 1 cut(s) 665
BanII GRGCYC 1 cut(s) 453
BbsI GAAGAC 1 cut(s) 1680
Bbv12I GWGCWC 2 cut(s) 453, 992
BbvI GCAGC 5 cut(s) 48, 1279, 1546, 1607, 2044
BccI CCATC 6 cut(s) 74, 344, 722, 757, 1846, 2195
BceAI ACGGC 1 cut(s) 2574
BcgI CGANNNNNNTGC 2 cut(s) 1113, 1147
BciT130I CCWGG 3 cut(s) 274, 1024, 2238
BciVI GTATCC 3 cut(s) 397, 645, 2506
BcoDI GTCTC 2 cut(s) 595, 993
BfaI CTAG 7 cut(s) 213, 530, 630, 891, 2396, 2520, 2643
BfuI GTATCC 3 cut(s) 397, 645, 2506
BisI GCNGC 7 cut(s) 62, 112, 304, 1293, 1535, 1596, 2058
BlsI GCNGC 7 cut(s) 63, 113, 305, 1294, 1536, 1597, 2059
BmcAI AGTACT 1 cut(s) 766
Bme1390I CCNGG 3 cut(s) 274, 1024, 2238
Bme18I GGWCC 3 cut(s) 389, 1355, 1759
BmeT110I CYCGRG 1 cut(s) 1267
BmgT120I GGNCC 5 cut(s) 389, 607, 932, 1355, 1759
BmiI GGNNCC 7 cut(s) 271, 513, 667, 1434, 1616, 1760, 1856
BmrFI CCNGG 3 cut(s) 274, 1024, 2238
BmsI GCATC 9 cut(s) 48, 421, 563, 820, 1139, 1584, 1818, 2044, 2222
BmtI GCTAGC 1 cut(s) 2399
BpiI GAAGAC 1 cut(s) 1680
BpmI CTGGAG 1 cut(s) 101
Bpu14I TTCGAA 1 cut(s) 2041
BpuEI CTTGAG 4 cut(s) 820, 1173, 1699, 1797
Bsa29I ATCGAT 1 cut(s) 1133
BsaAI YACGTR 1 cut(s) 1719
BsaBI GATNNNNATC 1 cut(s) 228
BsaJI CCNNGG 4 cut(s) 385, 1023, 1762, 2429
BsaWI WCCGGW 3 cut(s) 188, 1505, 2338
BsaXI ACNNNNNCTCC 4 cut(s) 979, 990, 1009, 1020
Bsc4I CCNNNNNNNGG 5 cut(s) 661, 1405, 1571, 1950, 2661
Bse118I RCCGGY 2 cut(s) 188, 2338
Bse1I ACTGG 5 cut(s) 154, 248, 638, 997, 1436
Bse3DI GCAATG 3 cut(s) 206, 1939, 2490
Bse8I GATNNNNATC 1 cut(s) 228
BseAI TCCGGA 1 cut(s) 1505
BseBI CCWGG 3 cut(s) 274, 1024, 2238
BseCI ATCGAT 1 cut(s) 1133
BseDI CCNNGG 4 cut(s) 385, 1023, 1762, 2429
BseGI GGATG 5 cut(s) 21, 707, 1575, 2119, 2213
BseJI GATNNNNATC 1 cut(s) 228
BseLI CCNNNNNNNGG 5 cut(s) 661, 1405, 1571, 1950, 2661
BseMI GCAATG 3 cut(s) 206, 1939, 2490
BseMII CTCAG 4 cut(s) 550, 1020, 1716, 2244
BseNI ACTGG 5 cut(s) 154, 248, 638, 997, 1436
BseRI GAGGAG 1 cut(s) 933
BseSI GKGCMC 1 cut(s) 1186
BseXI GCAGC 5 cut(s) 48, 1279, 1546, 1607, 2044
BsgI GTGCAG 3 cut(s) 365, 2043, 2063
Bsh1236I CGCG 1 cut(s) 303
Bsh1285I CGRYCG 1 cut(s) 2640
BshFI GGCC 9 cut(s) 114, 354, 541, 609, 921, 934, 1973, 2175, 2518
BshNI GGYRCC 1 cut(s) 665
BshTI ACCGGT 2 cut(s) 188, 2338
BshVI ATCGAT 1 cut(s) 1133
BsiEI CGRYCG 1 cut(s) 2640
BsiHKAI GWGCWC 2 cut(s) 453, 992
BsiHKCI CYCGRG 1 cut(s) 1267
BsiSI CCGG 3 cut(s) 189, 1506, 2339
BslFI GGGAC 2 cut(s) 446, 926
BslI CCNNNNNNNGG 5 cut(s) 661, 1405, 1571, 1950, 2661
BsmAI GTCTC 2 cut(s) 595, 993
BsmBI CGTCTC 1 cut(s) 993
BsmFI GGGAC 2 cut(s) 446, 926
BsnI GGCC 9 cut(s) 114, 354, 541, 609, 921, 934, 1973, 2175, 2518
BsoBI CYCGRG 1 cut(s) 1267
Bsp119I TTCGAA 1 cut(s) 2041
Bsp1286I GDGCHC 3 cut(s) 453, 992, 1186
Bsp13I TCCGGA 1 cut(s) 1505
Bsp143I GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
BspACI CCGC 2 cut(s) 111, 303
BspANI GGCC 9 cut(s) 114, 354, 541, 609, 921, 934, 1973, 2175, 2518
BspCNI CTCAG 4 cut(s) 549, 1021, 1717, 2245
BspDI ATCGAT 1 cut(s) 1133
BspEI TCCGGA 1 cut(s) 1505
BspFNI CGCG 1 cut(s) 303
BspHI TCATGA 1 cut(s) 2197
BspLI GGNNCC 7 cut(s) 271, 513, 667, 1434, 1616, 1760, 1856
BspOI GCTAGC 1 cut(s) 2399
BspPI GGATC 5 cut(s) 313, 1169, 1338, 2243, 2420
BspT104I TTCGAA 1 cut(s) 2041
BspT107I GGYRCC 1 cut(s) 665
BsrDI GCAATG 3 cut(s) 206, 1939, 2490
BsrFI RCCGGY 2 cut(s) 188, 2338
BsrI ACTGG 5 cut(s) 154, 248, 638, 997, 1436
BssAI RCCGGY 2 cut(s) 188, 2338
BssECI CCNNGG 4 cut(s) 385, 1023, 1762, 2429
BssMI GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
BssT1I CCWWGG 2 cut(s) 385, 1762
Bst2UI CCWGG 3 cut(s) 274, 1024, 2238
Bst4CI ACNGT 9 cut(s) 409, 738, 845, 1086, 1323, 1396, 1713, 1786, 2084
Bst6I CTCTTC 2 cut(s) 1586, 1887
BstAPI GCANNNNNTGC 2 cut(s) 108, 2054
BstBAI YACGTR 1 cut(s) 1719
BstBI TTCGAA 1 cut(s) 2041
BstC8I GCNNGC 4 cut(s) 36, 1573, 2230, 2397
BstDEI CTNAG 6 cut(s) 536, 1029, 1478, 1585, 1725, 2253
BstENI CCTNNNNNAGG 1 cut(s) 2659
BstF5I GGATG 5 cut(s) 21, 707, 1575, 2119, 2213
BstFNI CGCG 1 cut(s) 303
BstKTI GATC 8 cut(s) 321, 1137, 1177, 1333, 1993, 2251, 2428, 2640
BstMAI GTCTC 2 cut(s) 595, 993
BstMBI GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
BstMCI CGRYCG 1 cut(s) 2640
BstMWI GCNNNNNNNGC 5 cut(s) 44, 108, 431, 2054, 2238
BstNI CCWGG 3 cut(s) 274, 1024, 2238
BstNSI RCATGY 3 cut(s) 485, 2334, 2493
BstSCI CCNGG 3 cut(s) 272, 1022, 2236
BstSLI GKGCMC 1 cut(s) 1186
BstSNI TACGTA 1 cut(s) 1719
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 5 cut(s) 48, 1279, 1546, 1607, 2044
BstV2I GAAGAC 1 cut(s) 1680
BstX2I RGATCY 2 cut(s) 1174, 1330
BstXI CCANNNNNNTGG 2 cut(s) 929, 1657
BstYI RGATCY 2 cut(s) 1174, 1330
Bsu15I ATCGAT 1 cut(s) 1133
BsuI GTATCC 3 cut(s) 397, 645, 2506
BsuRI GGCC 9 cut(s) 114, 354, 541, 609, 921, 934, 1973, 2175, 2518
BsuTUI ATCGAT 1 cut(s) 1133
BtsCI GGATG 5 cut(s) 21, 707, 1575, 2119, 2213
BtsIMutI CAGTG 2 cut(s) 990, 2080
Cac8I GCNNGC 4 cut(s) 36, 1573, 2230, 2397
CaiI CAGNNNCTG 2 cut(s) 506, 2057
CciI TCATGA 1 cut(s) 2197
Cfr10I RCCGGY 2 cut(s) 188, 2338
Cfr13I GGNCC 5 cut(s) 389, 607, 932, 1355, 1759
ClaI ATCGAT 1 cut(s) 1133
CseI GACGC 2 cut(s) 179, 1130
Csp6I GTAC 2 cut(s) 739, 765
CspAI ACCGGT 2 cut(s) 188, 2338
CviQI GTAC 2 cut(s) 739, 765
DdeI CTNAG 6 cut(s) 536, 1029, 1478, 1585, 1725, 2253
DpnI GATC 8 cut(s) 320, 1136, 1176, 1332, 1992, 2250, 2427, 2639
DpnII GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
EaeI YGGCCR 2 cut(s) 352, 1971
Eam1104I CTCTTC 2 cut(s) 1586, 1887
EarI CTCTTC 2 cut(s) 1586, 1887
Ecl136II GAGCTC 1 cut(s) 451
Eco105I TACGTA 1 cut(s) 1719
Eco130I CCWWGG 2 cut(s) 385, 1762
Eco147I AGGCCT 2 cut(s) 541, 2518
Eco24I GRGCYC 1 cut(s) 453
Eco47I GGWCC 3 cut(s) 389, 1355, 1759
Eco53kI GAGCTC 1 cut(s) 451
Eco88I CYCGRG 1 cut(s) 1267
EcoICRI GAGCTC 1 cut(s) 451
EcoNI CCTNNNNNAGG 1 cut(s) 2659
EcoO109I RGGNCCY 1 cut(s) 1759
EcoRI GAATTC 1 cut(s) 2364
EcoRII CCWGG 3 cut(s) 272, 1022, 2236
EcoT14I CCWWGG 2 cut(s) 385, 1762
EcoT22I ATGCAT 2 cut(s) 556, 2215
EcoT38I GRGCYC 1 cut(s) 453
ErhI CCWWGG 2 cut(s) 385, 1762
Esp3I CGTCTC 1 cut(s) 993
FalI AAGNNNNNCTT 2 cut(s) 2022, 2054
FaqI GGGAC 2 cut(s) 446, 926
FblI GTMKAC 2 cut(s) 1959, 2335
Fnu4HI GCNGC 7 cut(s) 62, 112, 304, 1293, 1535, 1596, 2058
FokI GGATG 5 cut(s) 8, 694, 1562, 2126, 2200
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 7 cut(s) 62, 112, 304, 1293, 1535, 1596, 2058
FspBI CTAG 7 cut(s) 213, 530, 630, 891, 2396, 2520, 2643
GluI GCNGC 7 cut(s) 62, 112, 304, 1293, 1535, 1596, 2058
GsuI CTGGAG 1 cut(s) 101
HaeIII GGCC 9 cut(s) 114, 354, 541, 609, 921, 934, 1973, 2175, 2518
HapII CCGG 3 cut(s) 189, 1506, 2339
HgaI GACGC 2 cut(s) 179, 1130
HincII GTYRAC 3 cut(s) 957, 1120, 1143
HindII GTYRAC 3 cut(s) 957, 1120, 1143
HinfI GANTC 9 cut(s) 125, 657, 719, 725, 794, 1245, 1514, 1697, 2527
HpaII CCGG 3 cut(s) 189, 1506, 2339
HphI GGTGA 4 cut(s) 203, 505, 1827, 2417
HpyAV CCTTC 5 cut(s) 187, 260, 1052, 2231, 2542
HpyCH4III ACNGT 9 cut(s) 409, 738, 845, 1086, 1323, 1396, 1713, 1786, 2084
HpyCH4IV ACGT 5 cut(s) 903, 1197, 1718, 1947, 2292
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 108, 431, 2054, 2238
HpyF3I CTNAG 6 cut(s) 536, 1029, 1478, 1585, 1725, 2253
HpySE526I ACGT 5 cut(s) 903, 1197, 1718, 1947, 2292
Kpn2I TCCGGA 1 cut(s) 1505
Kzo9I GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
LmnI GCTCC 5 cut(s) 255, 269, 946, 987, 1614
Lsp1109I GCAGC 5 cut(s) 48, 1279, 1546, 1607, 2044
LweI GCATC 9 cut(s) 48, 421, 563, 820, 1139, 1584, 1818, 2044, 2222
MaeI CTAG 7 cut(s) 213, 530, 630, 891, 2396, 2520, 2643
MaeII ACGT 5 cut(s) 903, 1197, 1718, 1947, 2292
MaeIII GTNAC 7 cut(s) 295, 845, 1006, 1217, 1236, 2288, 2405
MalI GATC 8 cut(s) 320, 1136, 1176, 1332, 1992, 2250, 2427, 2639
MboI GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
MboII GAAGA 5 cut(s) 1124, 1573, 1685, 1874, 2042
MfeI CAATTG 1 cut(s) 1566
MflI RGATCY 2 cut(s) 1174, 1330
MhlI GDGCHC 3 cut(s) 453, 992, 1186
MlsI TGGCCA 2 cut(s) 354, 1973
MluNI TGGCCA 2 cut(s) 354, 1973
MlyI GAGTC 2 cut(s) 713, 2536
MmeI TCCRAC 5 cut(s) 901, 1903, 2049, 2298, 2415
Mox20I TGGCCA 2 cut(s) 354, 1973
Mph1103I ATGCAT 2 cut(s) 556, 2215
MroI TCCGGA 1 cut(s) 1505
MscI TGGCCA 2 cut(s) 354, 1973
MslI CAYNNNNRTG 3 cut(s) 927, 2112, 2589
Msp20I TGGCCA 2 cut(s) 354, 1973
MspI CCGG 3 cut(s) 189, 1506, 2339
MspR9I CCNGG 3 cut(s) 274, 1024, 2238
MunI CAATTG 1 cut(s) 1566
MvaI CCWGG 3 cut(s) 274, 1024, 2238
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 5 cut(s) 44, 108, 431, 2054, 2238
NdeII GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
NheI GCTAGC 1 cut(s) 2395
NlaIV GGNNCC 7 cut(s) 271, 513, 667, 1434, 1616, 1760, 1856
NmuCI GTSAC 2 cut(s) 2288, 2405
NsiI ATGCAT 2 cut(s) 556, 2215
NspI RCATGY 3 cut(s) 485, 2334, 2493
NspV TTCGAA 1 cut(s) 2041
PaeR7I CTCGAG 1 cut(s) 1267
PagI TCATGA 1 cut(s) 2197
PceI AGGCCT 2 cut(s) 541, 2518
PciI ACATGT 2 cut(s) 481, 2330
PfeI GAWTC 7 cut(s) 125, 657, 725, 794, 1245, 1514, 1697
PflMI CCANNNNNTGG 1 cut(s) 1571
PinAI ACCGGT 2 cut(s) 188, 2338
PkrI GCNGC 7 cut(s) 63, 113, 305, 1294, 1536, 1597, 2059
Ple19I CGATCG 1 cut(s) 2640
PleI GAGTC 2 cut(s) 713, 2535
PpsI GAGTC 2 cut(s) 713, 2535
Ppu21I YACGTR 1 cut(s) 1719
PpuMI RGGWCCY 1 cut(s) 1759
PscI ACATGT 2 cut(s) 481, 2330
PsiI TTATAA 2 cut(s) 1149, 2345
Psp124BI GAGCTC 1 cut(s) 453
Psp5II RGGWCCY 1 cut(s) 1759
Psp6I CCWGG 3 cut(s) 272, 1022, 2236
PspGI CCWGG 3 cut(s) 272, 1022, 2236
PspN4I GGNNCC 7 cut(s) 271, 513, 667, 1434, 1616, 1760, 1856
PspPI GGNCC 5 cut(s) 389, 607, 932, 1355, 1759
PspPPI RGGWCCY 1 cut(s) 1759
PspXI VCTCGAGB 1 cut(s) 1267
PstNI CAGNNNCTG 2 cut(s) 506, 2057
PsuI RGATCY 2 cut(s) 1174, 1330
PvuI CGATCG 1 cut(s) 2640
RsaI GTAC 2 cut(s) 740, 766
RsaNI GTAC 2 cut(s) 739, 765
RseI CAYNNNNRTG 3 cut(s) 927, 2112, 2589
SacI GAGCTC 1 cut(s) 453
SatI GCNGC 7 cut(s) 62, 112, 304, 1293, 1535, 1596, 2058
Sau3AI GATC 8 cut(s) 318, 1134, 1174, 1330, 1990, 2248, 2425, 2637
Sau96I GGNCC 5 cut(s) 389, 607, 932, 1355, 1759
ScaI AGTACT 1 cut(s) 766
SchI GAGTC 2 cut(s) 713, 2536
ScrFI CCNGG 3 cut(s) 274, 1024, 2238
SduI GDGCHC 3 cut(s) 453, 992, 1186
SfaNI GCATC 9 cut(s) 48, 421, 563, 820, 1139, 1584, 1818, 2044, 2222
Sfr274I CTCGAG 1 cut(s) 1267
SfuI TTCGAA 1 cut(s) 2041
SgrAI CRCCGGYG 1 cut(s) 188
SinI GGWCC 3 cut(s) 389, 1355, 1759
SlaI CTCGAG 1 cut(s) 1267
SmiMI CAYNNNNRTG 3 cut(s) 927, 2112, 2589
SmlI CTYRAG 5 cut(s) 799, 1188, 1267, 1678, 1812
SmoI CTYRAG 5 cut(s) 799, 1188, 1267, 1678, 1812
SnaBI TACGTA 1 cut(s) 1719
SseBI AGGCCT 2 cut(s) 541, 2518
SsiI CCGC 2 cut(s) 111, 303
SspI AATATT 4 cut(s) 314, 839, 1153, 1654
SspMI CTAG 7 cut(s) 213, 530, 630, 891, 2396, 2520, 2643
SstI GAGCTC 1 cut(s) 453
StuI AGGCCT 2 cut(s) 541, 2518
StyD4I CCNGG 3 cut(s) 272, 1022, 2236
StyI CCWWGG 2 cut(s) 385, 1762
TaaI ACNGT 9 cut(s) 409, 738, 845, 1086, 1323, 1396, 1713, 1786, 2084
TaiI ACGT 5 cut(s) 906, 1200, 1721, 1950, 2295
TaqII GACCGA 1 cut(s) 669
TatI WGTACW 1 cut(s) 764
TauI GCSGC 2 cut(s) 114, 306
TfiI GAWTC 7 cut(s) 125, 657, 725, 794, 1245, 1514, 1697
TscAI CASTG 2 cut(s) 997, 2087
TseFI GTSAC 2 cut(s) 2288, 2405
TseI GCWGC 5 cut(s) 61, 1292, 1534, 1595, 2057
Tsp45I GTSAC 2 cut(s) 2288, 2405
TspGWI ACGGA 2 cut(s) 930, 2449
TspRI CASTG 2 cut(s) 997, 2087
Van91I CCANNNNNTGG 1 cut(s) 1571
VpaK11BI GGWCC 3 cut(s) 389, 1355, 1759
XagI CCTNNNNNAGG 1 cut(s) 2659
XapI RAATTY 9 cut(s) 200, 371, 1229, 1367, 1379, 1540, 2146, 2364, 2443
XbaI TCTAGA 2 cut(s) 529, 890
XceI RCATGY 3 cut(s) 485, 2334, 2493
XhoI CTCGAG 1 cut(s) 1267
XmiI GTMKAC 2 cut(s) 1959, 2335
XspI CTAG 7 cut(s) 213, 530, 630, 891, 2396, 2520, 2643
ZrmI AGTACT 1 cut(s) 766
Zsp2I ATGCAT 2 cut(s) 556, 2215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.