Rh2BG430000

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000083
Physical Location & Seq
Reverse (-)
60888579 .. 60893162
4584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG430000.1

Sequence Viewer

Length: 1875 bp
ATGAATACAGCCAGCACTCCAATAAATGCTAATTCTCCCATAAAAATCTCCTGGAACTCTACAGATAGCACCACTCAATATTATCTCTTCATGCATTTTGCTGAGCTGCAACAGCTTCAGGCCAATCAGTTCAGAGCATTCAATATCATTCTGGATGGGCAGCTTTTCGGTGAAACTGTTATTCCACAACATTTGTCCACAAACACTCTGTATTCCACATCACCCTTGTTACCTAAACCAATTCACAATTTGTCAATCTTCAAGACTGAGATTTCAACTCTACCACCTATCATTAATGCCATCGAGGTCTACACATTGAAAGACTTCTCACAACTTGAAACTGATGAAGACGACGTGGCTGCGATCATGAACACAAAGTCAACATACGGAGTGAAGAAGAATTGGGAAGGAGACCCATGTGCTCCACAAGAATACATTTGGGAAGGTCTCAACTGTAGCTCTAATGATTCTGATCACCCCAGAATCACATCATTGAACCTCTCTTCAAGTGGACTAATTGGGGAGATAACTTCATATATATCTAATCTTGTCCAACTACAATCTTTGGATTTGTCAAACAATAGCTTAACTGGTTCAATACCGGAGTTCCTGTCTAAATTGCCAAACCTGAAAGTTCTTAACCTGGAAAAGAACAATATCAATGGTTCAGTTCCAGCTGAACTTGTTGAAAGATCAAGAAGCGGCAGACTAACTTTAAGTGTGGGAGAAAATAAAAACCTATGTGCAGAAAATTCATGTGAAAAGAAGAAAATAAATGTACTCATTACAGCAATAGCATCAGTTGGAGGAGTTTTCATTTTCTTGTTAGCAGCAGTGGCAATATCCATGGGACTGAAAAGAGGAGGGAAAACGCATGCATCCAACAATCAAAATGATTCATTTGAGTCCAAAAGACGGCAATTTACATACTCAGAGATCTTGAAGATTACTAATAACTTTCAGACAATTCTTGGTAAAGGAGGATTTGGAACAGTGTACCATGGCTATGCAGATGGTATTCAAGTTGCTGTGAAGATACTTTCTCCATCATCAGCTCAAGGATACCAAGAATTTCAGACAGAGGTTAAACTTCTGATGAGAGTTCATCATAGAAACTTGACTAGTCTAGTTGGATATTGCAATGAACAAACGACCATGGCTCTCGTCTACGAATACATGGTCAATGGAAATTTGGAATCACATCTTTTAGGTGATGAGAGCAATGTGAATGTCTTGAGTTGGGAACGTAGACTGCAAATTGCAAGGGATACATCACAAGGATTGGAGTATCTGCACAATGGTTGTAGGCCACCTATTGTCCACAGAGATGTGAAAACAACAAATATTTTGTTAGCCGAAAATTTCCAGGCAAAATTGGCTGATTTTGGCCTATCTAGAGTTTTCCCAACTGATGGAGGCACTCATATGTCCACAGCTGTTGTCGGCACGCCTGGATACCTTGATCCTGAGTACCACATAACCGGCAGGCTGAACGAGAAAAGTGATGTTTATAGCTTTGGAGTTGCTCTCTTGCAAATAATCACTAGCCGTCCTGTGATATCAAGAGGTGCTCATGAAAATACTCATGTAAGTCAATGGGTTAGCTCCATGCTTGGTATAGGGAATGTTAAAAGTATTGTGGATCCGAGGTTATGCGGAGATTTCAAAGTTAACTCTGCCTGGAAGGCTGTTGAACTAGCAATGGATTGTATATCTGAAACATCAACTGAGAGGCCAAACATGAGTGAGGTAGTGACGAGACTAAAGGAATGCTTGGCTGCAGAAATAGCTCGTGAGAACGAGAGCCATTTGACTGGATCAACTGATTTATACTCTATTAATGTAACTGCTCCACTCAATCCCTCGGCAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

624

Amino Acids

68.81

Weight (kDa)

5.92

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 1 - 105 2.6e-27 Malectin-like domain
LRR_8 PF13855 160 - 220 2.6e-07 Leucine rich repeat
LRR_4 PF12799 185 - 222 1.1e-08 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 320 - 588 1.7e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 322 - 585 3.7e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1412
AccI GTMKAC 3 cut(s) 309, 1167, 1249
AciI CCGC 2 cut(s) 702, 1656
AclWI GGATC 4 cut(s) 1457, 1637, 1650, 1825
AcsI RAATTY 4 cut(s) 751, 1070, 1189, 1360
AcuI CTGAAG 1 cut(s) 101
AfaI GTAC 3 cut(s) 780, 998, 1472
AfiI CCNNNNNNNGG 2 cut(s) 915, 1412
AhlI ACTAGT 1 cut(s) 1121
AjiI CACGTC 1 cut(s) 355
AjnI CCWGG 5 cut(s) 50, 642, 1365, 1450, 1679
Alw21I GWGCWC 2 cut(s) 424, 1573
Alw26I GTCTC 3 cut(s) 405, 452, 1753
AlwI GGATC 4 cut(s) 1457, 1637, 1650, 1825
AoxI GGCC 4 cut(s) 120, 1307, 1387, 1733
ApeKI GCWGC 5 cut(s) 106, 160, 359, 830, 1778
ApoI RAATTY 4 cut(s) 751, 1070, 1189, 1360
ArsI GACNNNNNNTTYG 2 cut(s) 1164, 1196
AseI ATTAAT 2 cut(s) 294, 1839
Asp700I GAANNNNTTC 1 cut(s) 323
AsuHPI GGTGA 4 cut(s) 182, 213, 467, 1223
BamHI GGATCC 1 cut(s) 1642
BauI CACGAG 1 cut(s) 1791
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 2 cut(s) 424, 1573
BbvI GCAGC 5 cut(s) 93, 172, 346, 842, 1765
BccI CCATC 5 cut(s) 149, 308, 1007, 1054, 1406
BceAI ACGGC 2 cut(s) 932, 1533
BcgI CGANNNNNNTGC 2 cut(s) 341, 375
BciT130I CCWGG 5 cut(s) 52, 644, 1367, 1452, 1681
BciVI GTATCC 3 cut(s) 1055, 1261, 1448
BclI TGATCA 1 cut(s) 472
BcoDI GTCTC 3 cut(s) 405, 452, 1753
BcuI ACTAGT 1 cut(s) 1121
BfaI CTAG 5 cut(s) 1122, 1127, 1395, 1545, 1697
BfmI CTRYAG 3 cut(s) 60, 454, 1779
BfuI GTATCC 3 cut(s) 1055, 1261, 1448
BglI GCCNNNNNGGC 1 cut(s) 1685
BglII AGATCT 1 cut(s) 936
BisI GCNGC 6 cut(s) 107, 161, 360, 703, 831, 1779
BlpI GCTNAGC 1 cut(s) 102
BlsI GCNGC 6 cut(s) 108, 162, 361, 704, 832, 1780
Bme1390I CCNGG 5 cut(s) 52, 644, 1367, 1452, 1681
BmgBI CACGTC 1 cut(s) 355
BmiI GGNNCC 1 cut(s) 1644
BmrFI CCNGG 5 cut(s) 52, 644, 1367, 1452, 1681
BmsI GCATC 2 cut(s) 806, 887
BpiI GAAGAC 1 cut(s) 354
BplI GAGNNNNNCTC 2 cut(s) 1512, 1544
Bpu1102I GCTNAGC 1 cut(s) 102
BpuEI CTTGAG 2 cut(s) 1041, 1255
BsaBI GATNNNNATC 1 cut(s) 471
BsaI GGTCTC 2 cut(s) 405, 452
BsaJI CCNNGG 5 cut(s) 846, 1000, 1155, 1646, 1863
BsaWI WCCGGW 1 cut(s) 601
BsaXI ACNNNNNCTCC 2 cut(s) 596, 626
Bsc4I CCNNNNNNNGG 2 cut(s) 915, 1412
Bse118I RCCGGY 1 cut(s) 1481
Bse1I ACTGG 2 cut(s) 595, 1819
Bse3DI GCAATG 3 cut(s) 1147, 1228, 1707
Bse8I GATNNNNATC 1 cut(s) 471
BseBI CCWGG 5 cut(s) 52, 644, 1367, 1452, 1681
BseDI CCNNGG 5 cut(s) 846, 1000, 1155, 1646, 1863
BseGI GGATG 2 cut(s) 160, 878
BseJI GATNNNNATC 1 cut(s) 471
BseLI CCNNNNNNNGG 2 cut(s) 915, 1412
BseMI GCAATG 3 cut(s) 1147, 1228, 1707
BseMII CTCAG 5 cut(s) 93, 258, 945, 1458, 1719
BseNI ACTGG 2 cut(s) 595, 1819
BseRI GAGGAG 2 cut(s) 822, 876
BseXI GCAGC 5 cut(s) 93, 172, 346, 842, 1765
BsgI GTGCAG 2 cut(s) 765, 1277
BshFI GGCC 4 cut(s) 122, 1309, 1389, 1735
BsiHKAI GWGCWC 2 cut(s) 424, 1573
BsiSI CCGG 2 cut(s) 602, 1482
BslFI GGGAC 1 cut(s) 864
BslI CCNNNNNNNGG 2 cut(s) 915, 1412
BsmAI GTCTC 3 cut(s) 405, 452, 1753
BsmFI GGGAC 1 cut(s) 864
BsmI GAATGC 2 cut(s) 137, 1775
BsnI GGCC 4 cut(s) 122, 1309, 1389, 1735
Bso31I GGTCTC 2 cut(s) 405, 452
Bsp1286I GDGCHC 2 cut(s) 424, 1573
Bsp143I GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
Bsp1720I GCTNAGC 1 cut(s) 102
Bsp19I CCATGG 3 cut(s) 846, 1000, 1155
BspACI CCGC 2 cut(s) 702, 1656
BspANI GGCC 4 cut(s) 122, 1309, 1389, 1735
BspCNI CTCAG 5 cut(s) 94, 259, 944, 1459, 1720
BspHI TCATGA 2 cut(s) 366, 1573
BspLI GGNNCC 1 cut(s) 1644
BspMAI CTGCAG 1 cut(s) 1783
BspPI GGATC 4 cut(s) 1457, 1637, 1650, 1825
BspTNI GGTCTC 2 cut(s) 405, 452
BsrDI GCAATG 3 cut(s) 1147, 1228, 1707
BsrFI RCCGGY 1 cut(s) 1481
BsrI ACTGG 2 cut(s) 595, 1819
BssAI RCCGGY 1 cut(s) 1481
BssECI CCNNGG 5 cut(s) 846, 1000, 1155, 1646, 1863
BssMI GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
BssSI CACGAG 1 cut(s) 1791
BssT1I CCWWGG 3 cut(s) 846, 1000, 1155
Bst2BI CACGAG 1 cut(s) 1791
Bst2UI CCWGG 5 cut(s) 52, 644, 1367, 1452, 1681
Bst4CI ACNGT 3 cut(s) 178, 455, 994
Bst6I CTCTTC 2 cut(s) 92, 508
BstC8I GCNNGC 4 cut(s) 13, 876, 1448, 1487
BstDEI CTNAG 5 cut(s) 102, 267, 931, 1467, 1728
BstDSI CCRYGG 3 cut(s) 846, 1000, 1155
BstF5I GGATG 2 cut(s) 160, 878
BstKTI GATC 7 cut(s) 366, 475, 695, 939, 1465, 1645, 1820
BstMAI GTCTC 3 cut(s) 405, 452, 1753
BstMBI GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
BstMWI GCNNNNNNNGC 5 cut(s) 112, 836, 1376, 1685, 1787
BstNI CCWGG 5 cut(s) 52, 644, 1367, 1452, 1681
BstNSI RCATGY 1 cut(s) 878
BstSCI CCNGG 5 cut(s) 50, 642, 1365, 1450, 1679
BstSFI CTRYAG 3 cut(s) 60, 454, 1779
BstV1I GCAGC 5 cut(s) 93, 172, 346, 842, 1765
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 2 cut(s) 936, 1642
BstXI CCANNNNNNTGG 1 cut(s) 1814
BstYI RGATCY 2 cut(s) 936, 1642
BsuI GTATCC 3 cut(s) 1055, 1261, 1448
BsuRI GGCC 4 cut(s) 122, 1309, 1389, 1735
BtgI CCRYGG 3 cut(s) 846, 1000, 1155
BtrI CACGTC 1 cut(s) 355
BtsCI GGATG 2 cut(s) 160, 878
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 2 cut(s) 840, 999
Cac8I GCNNGC 4 cut(s) 13, 876, 1448, 1487
CciI TCATGA 2 cut(s) 366, 1573
Cfr10I RCCGGY 1 cut(s) 1481
Csp6I GTAC 3 cut(s) 779, 997, 1471
CspCI CAANNNNNGTGG 4 cut(s) 174, 209, 1420, 1455
CviQI GTAC 3 cut(s) 779, 997, 1471
DdeI CTNAG 5 cut(s) 102, 267, 931, 1467, 1728
DpnI GATC 7 cut(s) 365, 474, 694, 938, 1464, 1644, 1819
DpnII GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
Eam1104I CTCTTC 2 cut(s) 92, 508
EarI CTCTTC 2 cut(s) 92, 508
Eco130I CCWWGG 3 cut(s) 846, 1000, 1155
Eco31I GGTCTC 2 cut(s) 405, 452
Eco32I GATATC 1 cut(s) 1560
Eco57I CTGAAG 1 cut(s) 101
EcoRII CCWGG 5 cut(s) 50, 642, 1365, 1450, 1679
EcoRV GATATC 1 cut(s) 1560
EcoT14I CCWWGG 3 cut(s) 846, 1000, 1155
EcoT22I ATGCAT 2 cut(s) 96, 880
ErhI CCWWGG 3 cut(s) 846, 1000, 1155
FalI AAGNNNNNCTT 2 cut(s) 1757, 1789
FaqI GGGAC 1 cut(s) 864
FauNDI CATATG 1 cut(s) 1425
FbaI TGATCA 1 cut(s) 472
FblI GTMKAC 3 cut(s) 309, 1167, 1249
Fnu4HI GCNGC 6 cut(s) 107, 161, 360, 703, 831, 1779
FokI GGATG 2 cut(s) 167, 865
Fsp4HI GCNGC 6 cut(s) 107, 161, 360, 703, 831, 1779
FspBI CTAG 5 cut(s) 1122, 1127, 1395, 1545, 1697
GluI GCNGC 6 cut(s) 107, 161, 360, 703, 831, 1779
HaeIII GGCC 4 cut(s) 122, 1309, 1389, 1735
HapII CCGG 2 cut(s) 602, 1482
HincII GTYRAC 2 cut(s) 381, 1672
HindII GTYRAC 2 cut(s) 381, 1672
HinfI GANTC 5 cut(s) 467, 483, 896, 905, 1196
HpaI GTTAAC 1 cut(s) 1672
HpaII CCGG 2 cut(s) 602, 1482
HphI GGTGA 4 cut(s) 182, 213, 467, 1223
Hpy188I TCNGA 8 cut(s) 134, 472, 934, 963, 1077, 1095, 1647, 1717
Hpy99I CGWCG 1 cut(s) 356
HpyAV CCTTC 3 cut(s) 401, 437, 1678
HpyCH4III ACNGT 3 cut(s) 178, 455, 994
HpyCH4IV ACGT 2 cut(s) 354, 1246
HpyF10VI GCNNNNNNNGC 5 cut(s) 112, 836, 1376, 1685, 1787
HpyF3I CTNAG 5 cut(s) 102, 267, 931, 1467, 1728
HpySE526I ACGT 2 cut(s) 354, 1246
Ksp22I TGATCA 1 cut(s) 472
KspAI GTTAAC 1 cut(s) 1672
Kzo9I GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
LmnI GCTCC 3 cut(s) 427, 1610, 1855
Lsp1109I GCAGC 5 cut(s) 93, 172, 346, 842, 1765
LweI GCATC 2 cut(s) 806, 887
MaeI CTAG 5 cut(s) 1122, 1127, 1395, 1545, 1697
MaeII ACGT 2 cut(s) 354, 1246
MaeIII GTNAC 3 cut(s) 228, 1753, 1843
MalI GATC 7 cut(s) 365, 474, 694, 938, 1464, 1644, 1819
MboI GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
MboII GAAGA 9 cut(s) 79, 250, 359, 406, 409, 495, 778, 955, 1045
MflI RGATCY 2 cut(s) 936, 1642
MhlI GDGCHC 2 cut(s) 424, 1573
MlyI GAGTC 1 cut(s) 914
MmeI TCCRAC 4 cut(s) 577, 784, 906, 1111
Mph1103I ATGCAT 2 cut(s) 96, 880
MroXI GAANNNNTTC 1 cut(s) 323
MseI TTAA 8 cut(s) 294, 587, 639, 716, 1086, 1629, 1671, 1839
MslI CAYNNNNRTG 3 cut(s) 1005, 1326, 1424
MspA1I CMGCKG 2 cut(s) 677, 1436
MspI CCGG 2 cut(s) 602, 1482
MspR9I CCNGG 5 cut(s) 52, 644, 1367, 1452, 1681
Mva1269I GAATGC 2 cut(s) 137, 1775
MvaI CCWGG 5 cut(s) 52, 644, 1367, 1452, 1681
MwoI GCNNNNNNNGC 5 cut(s) 112, 836, 1376, 1685, 1787
NcoI CCATGG 3 cut(s) 846, 1000, 1155
NdeI CATATG 1 cut(s) 1425
NdeII GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
NlaIV GGNNCC 1 cut(s) 1644
NmeAIII GCCGAG 1 cut(s) 1844
NmuCI GTSAC 1 cut(s) 1753
NsiI ATGCAT 2 cut(s) 96, 880
NspI RCATGY 1 cut(s) 878
PaeI GCATGC 1 cut(s) 878
PagI TCATGA 2 cut(s) 366, 1573
PctI GAATGC 2 cut(s) 137, 1775
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 4 cut(s) 467, 483, 896, 1196
PflMI CCANNNNNTGG 1 cut(s) 1412
PfoI TCCNGGA 1 cut(s) 50
PkrI GCNGC 6 cut(s) 108, 162, 361, 704, 832, 1780
PleI GAGTC 1 cut(s) 913
PpsI GAGTC 1 cut(s) 913
PshBI ATTAAT 2 cut(s) 294, 1839
Psp6I CCWGG 5 cut(s) 50, 642, 1365, 1450, 1679
PspGI CCWGG 5 cut(s) 50, 642, 1365, 1450, 1679
PspN4I GGNNCC 1 cut(s) 1644
PstI CTGCAG 1 cut(s) 1783
PsuI RGATCY 2 cut(s) 936, 1642
PvuII CAGCTG 2 cut(s) 677, 1436
RsaI GTAC 3 cut(s) 780, 998, 1472
RsaNI GTAC 3 cut(s) 779, 997, 1471
RseI CAYNNNNRTG 3 cut(s) 1005, 1326, 1424
SaqAI TTAA 8 cut(s) 294, 587, 639, 716, 1086, 1629, 1671, 1839
SatI GCNGC 6 cut(s) 107, 161, 360, 703, 831, 1779
Sau3AI GATC 7 cut(s) 363, 472, 692, 936, 1462, 1642, 1817
SchI GAGTC 1 cut(s) 914
ScrFI CCNGG 5 cut(s) 52, 644, 1367, 1452, 1681
SduI GDGCHC 2 cut(s) 424, 1573
SfaNI GCATC 2 cut(s) 806, 887
SfcI CTRYAG 3 cut(s) 60, 454, 1779
SmiMI CAYNNNNRTG 3 cut(s) 1005, 1326, 1424
SmlI CTYRAG 2 cut(s) 1056, 1234
SmoI CTYRAG 2 cut(s) 1056, 1234
SpeI ACTAGT 1 cut(s) 1121
SphI GCATGC 1 cut(s) 878
SsiI CCGC 2 cut(s) 702, 1656
SspI AATATT 2 cut(s) 80, 1345
SspMI CTAG 5 cut(s) 1122, 1127, 1395, 1545, 1697
StyD4I CCNGG 5 cut(s) 50, 642, 1365, 1450, 1679
StyI CCWWGG 3 cut(s) 846, 1000, 1155
TaaI ACNGT 3 cut(s) 178, 455, 994
TaiI ACGT 2 cut(s) 357, 1249
TaqI TCGA 1 cut(s) 303
TatI WGTACW 1 cut(s) 778
TauI GCSGC 1 cut(s) 705
TfiI GAWTC 4 cut(s) 467, 483, 896, 1196
Tru1I TTAA 8 cut(s) 294, 587, 639, 716, 1086, 1629, 1671, 1839
Tru9I TTAA 8 cut(s) 294, 587, 639, 716, 1086, 1629, 1671, 1839
TscAI CASTG 2 cut(s) 840, 999
TseFI GTSAC 1 cut(s) 1753
TseI GCWGC 5 cut(s) 106, 160, 359, 830, 1778
Tsp45I GTSAC 1 cut(s) 1753
TspGWI ACGGA 1 cut(s) 402
TspRI CASTG 2 cut(s) 840, 999
Van91I CCANNNNNTGG 1 cut(s) 1412
VspI ATTAAT 2 cut(s) 294, 1839
XapI RAATTY 4 cut(s) 751, 1070, 1189, 1360
XbaI TCTAGA 1 cut(s) 1394
XceI RCATGY 1 cut(s) 878
XmiI GTMKAC 3 cut(s) 309, 1167, 1249
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 5 cut(s) 1122, 1127, 1395, 1545, 1697
Zsp2I ATGCAT 2 cut(s) 96, 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.