Rmu_sc0003040.1_g000008

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003040.1
OG0000083
Physical Location & Seq
Forward (+)
19260 .. 23428
4169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003040.1_g000008.1.cds

Sequence Viewer

Length: 2250 bp
atgaggcttatgttcaagcatctcctttatgcagtgctctgttttgctcttatacatgatctggttcattcccaagataatcaatcaggcttcatcagcttggactgtggactgccatcagattctccctactctgagccaaccacaaagattaactacatttcagatgcacccttcatcgacaccggtgtaagtagaaccatagaggctcaatataaagctaaccatcaactgcaggttactcgtgtccggagctttcctcaggggatcaggaattgttacagagtagacgtcactagtggtactaaatacttgattagagctacatttctttatgggaactatgatgggctaaataaattgcccaagtttgatctgcacctgggacctaatttctgggattcagtgacacccgcctttgcaaacgcatccaccatgaacgaactcattcacactccttcattaaaccacatacaagtgtgtctgctgaacaagggctccggaacaccattcatttcagcattggaatttaggcctttgccgaacactatttatgttaccaacccaggtgattcattggcactagcctggcgctcagatactgcatcaacaagcactagagcttacaggtcaataagtacctcgcttaccgtacaggaaaatgattaccgagtaccaactatagtaatgaatacagccagcactccaataaatgctaattctcccataaaaatctcctggaactctacagatagcaccactcaatattatctcttcatgcattttgctgagctgcaacagcttcaggccaatcagttcagagcattcaatatcattctggatgggcagcttttcggtgatactgttattccacaacatttgtccacatacaccctgtattccacatcacccttgttacctaaaccaattcacaatttgtcaatcttcaagactgagatttcaactctaccacctatcattaatgccatcgaggtctacacattgaaagacttctcacaacttgaaactgatgaagacgacgtggctgcgatcatgaacacaaagtcaacatacggagtgaagaagaattgggaaggagacccatgtgctccacaagaatacatttgggaaggtctcaactgtagctctaatgattctgatcaccccagaatcacatcattggatttgtcaaacaatagcttaactggttcaataccggagttcctgtctaaattgccaaacctgaaagttcttaacctggaaaagaacaatatcaatggttcagttccagctgaacttgttgaaagatcaagaagcggcagactaactttaaggtatacaattcttggtaaaggaggatttggaacagtgtaccatggctatgcagatggtattcaagttgctgtgaagatgctttctccatcatcagctcaaggataccaagaatttcagacagaggttaaacttctgatgagagttcatcatagaaacttgactagtctagttggatattgcaatgaacaaacgaccatggctctcgtctacgaatacatggtcaatggaaatttggaatcacatcttttaggtgatgagagcaatgtgaatgtcttgagttgggaacgtagactgcaaattgcaagggatacatcacaaggattggagtatctgcacaatggttgtaggccacctattgtccacagagatgtgaaaacaacaaatattttgttagccgaaaatttccaggcaaaattggctgattttggcctatctagagttttcccaactgatggaggcactcatatgtccacagctgttgtcggcacgcctggataccttgatcctgagtaccacataaccggcaggctgaacgagaaaagtgatgtttatagctttggagttgctctcttgcaaataatcactagccgtcctgtgatatcaagaggtgctcatgaaaatactcatgtaagtcaatgggtgagctccatgcttggtatagggaatgttaaaagtattgtggatccgaggttatgcggagatttcaaagttaactctgcctggaaggctgttgaactagcaatggattgtatatctgaaacatcaactgagaggccaaacatgagtgaggtagtgacgagactaaaggaatgcttggctgcagaaatagctcgtgagaacgagagccatttgactggatcaactgatttatactctattaatgtaactgctccactcaatccctcggcaagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

749

Amino Acids

83.31

Weight (kDa)

6.0

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 294
Acc36I ACCTGC 1 cut(s) 226
AccB7I CCANNNNNTGG 1 cut(s) 1787
AccI GTMKAC 5 cut(s) 288, 996, 1337, 1542, 1624
AccIII TCCGGA 2 cut(s) 249, 500
AciI CCGC 3 cut(s) 414, 1317, 2031
AclWI GGATC 5 cut(s) 275, 1832, 2012, 2025, 2200
AcsI RAATTY 4 cut(s) 527, 1445, 1564, 1735
AcuI CTGAAG 1 cut(s) 788
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 6 cut(s) 304, 640, 654, 675, 1373, 1847
AfiI CCNNNNNNNGG 1 cut(s) 1787
AgeI ACCGGT 1 cut(s) 185
AhlI ACTAGT 2 cut(s) 296, 1496
AjiI CACGTC 1 cut(s) 1042
AjnI CCWGG 8 cut(s) 381, 565, 587, 737, 1257, 1740, 1825, 2054
AloI GAACNNNNNNTCC 2 cut(s) 482, 514
Alw21I GWGCWC 4 cut(s) 39, 1111, 1948, 1982
Alw26I GTCTC 3 cut(s) 1092, 1139, 2128
AlwI GGATC 5 cut(s) 275, 1832, 2012, 2025, 2200
AlwNI CAGNNNCTG 1 cut(s) 602
Aor13HI TCCGGA 2 cut(s) 249, 500
AoxI GGCC 5 cut(s) 533, 807, 1682, 1762, 2108
ApeKI GCWGC 4 cut(s) 793, 847, 1046, 2153
ApoI RAATTY 4 cut(s) 527, 1445, 1564, 1735
ArsI GACNNNNNNTTYG 2 cut(s) 1539, 1571
AseI ATTAAT 2 cut(s) 981, 2214
AsiGI ACCGGT 1 cut(s) 185
Asp700I GAANNNNTTC 2 cut(s) 447, 1010
AspLEI GCGC 1 cut(s) 594
AspS9I GGNCC 1 cut(s) 386
AsuHPI GGTGA 6 cut(s) 581, 869, 900, 1154, 1598, 1987
AvaII GGWCC 1 cut(s) 386
AxyI CCTNAGG 1 cut(s) 261
BamHI GGATCC 1 cut(s) 2017
BanII GRGCYC 2 cut(s) 500, 1982
BauI CACGAG 2 cut(s) 243, 2166
BbsI GAAGAC 1 cut(s) 1041
Bbv12I GWGCWC 4 cut(s) 39, 1111, 1948, 1982
BbvI GCAGC 4 cut(s) 780, 859, 1033, 2140
BccI CCATC 8 cut(s) 124, 234, 341, 836, 995, 1382, 1429, 1781
BceAI ACGGC 1 cut(s) 1908
BcgI CGANNNNNNTGC 4 cut(s) 224, 258, 1028, 1062
BciT130I CCWGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
BciVI GTATCC 3 cut(s) 1430, 1636, 1823
BclI TGATCA 1 cut(s) 1159
BcoDI GTCTC 3 cut(s) 1092, 1139, 2128
BcuI ACTAGT 2 cut(s) 296, 1496
BfaI CTAG 8 cut(s) 297, 584, 618, 1497, 1502, 1770, 1920, 2072
BfmI CTRYAG 5 cut(s) 233, 681, 747, 1141, 2154
BfoI RGCGCY 1 cut(s) 595
BfuAI ACCTGC 1 cut(s) 226
BfuI GTATCC 3 cut(s) 1430, 1636, 1823
BglI GCCNNNNNGGC 1 cut(s) 2060
BisI GCNGC 5 cut(s) 794, 848, 1047, 1318, 2154
BlpI GCTNAGC 1 cut(s) 789
BlsI GCNGC 5 cut(s) 795, 849, 1048, 1319, 2155
Bme1390I CCNGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
Bme18I GGWCC 1 cut(s) 386
BmgBI CACGTC 1 cut(s) 1042
BmgT120I GGNCC 1 cut(s) 386
BmiI GGNNCC 3 cut(s) 387, 499, 2019
BmrFI CCNGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
BmsI GCATC 5 cut(s) 28, 157, 437, 614, 1401
BpiI GAAGAC 1 cut(s) 1041
BplI GAGNNNNNCTC 4 cut(s) 244, 276, 1887, 1919
Bpu1102I GCTNAGC 1 cut(s) 789
BpuEI CTTGAG 2 cut(s) 1416, 1630
BsaBI GATNNNNATC 1 cut(s) 1158
BsaHI GRCGYC 1 cut(s) 291
BsaI GGTCTC 2 cut(s) 1092, 1139
BsaJI CCNNGG 6 cut(s) 382, 565, 1375, 1530, 2021, 2238
BsaWI WCCGGW 4 cut(s) 185, 249, 500, 1216
BsaXI ACNNNNNCTCC 4 cut(s) 482, 512, 1211, 1241
Bsc4I CCNNNNNNNGG 1 cut(s) 1787
Bse118I RCCGGY 2 cut(s) 185, 1856
Bse1I ACTGG 2 cut(s) 1210, 2194
Bse21I CCTNAGG 1 cut(s) 261
Bse3DI GCAATG 3 cut(s) 1522, 1603, 2082
Bse8I GATNNNNATC 1 cut(s) 1158
BseAI TCCGGA 2 cut(s) 249, 500
BseBI CCWGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
BseDI CCNNGG 6 cut(s) 382, 565, 1375, 1530, 2021, 2238
BseGI GGATG 2 cut(s) 428, 847
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 1 cut(s) 1787
BseMI GCAATG 3 cut(s) 1522, 1603, 2082
BseMII CTCAG 7 cut(s) 126, 275, 609, 780, 945, 1833, 2094
BseNI ACTGG 2 cut(s) 1210, 2194
BseXI GCAGC 4 cut(s) 780, 859, 1033, 2140
BsgI GTGCAG 2 cut(s) 362, 1652
BshFI GGCC 5 cut(s) 535, 809, 1684, 1764, 2110
BshTI ACCGGT 1 cut(s) 185
BsiHKAI GWGCWC 4 cut(s) 39, 1111, 1948, 1982
BsiSI CCGG 5 cut(s) 186, 250, 501, 1217, 1857
BslFI GGGAC 1 cut(s) 399
BslI CCNNNNNNNGG 1 cut(s) 1787
BsmAI GTCTC 3 cut(s) 1092, 1139, 2128
BsmFI GGGAC 1 cut(s) 399
BsmI GAATGC 2 cut(s) 824, 2150
BsnI GGCC 5 cut(s) 535, 809, 1684, 1764, 2110
Bso31I GGTCTC 2 cut(s) 1092, 1139
Bsp1286I GDGCHC 5 cut(s) 39, 500, 1111, 1948, 1982
Bsp13I TCCGGA 2 cut(s) 249, 500
Bsp143I GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
Bsp1720I GCTNAGC 1 cut(s) 789
Bsp19I CCATGG 2 cut(s) 1375, 1530
BspACI CCGC 3 cut(s) 414, 1317, 2031
BspANI GGCC 5 cut(s) 535, 809, 1684, 1764, 2110
BspCNI CTCAG 7 cut(s) 127, 274, 608, 781, 946, 1834, 2095
BspEI TCCGGA 2 cut(s) 249, 500
BspHI TCATGA 2 cut(s) 1053, 1948
BspLI GGNNCC 3 cut(s) 387, 499, 2019
BspMAI CTGCAG 2 cut(s) 237, 2158
BspMI ACCTGC 1 cut(s) 226
BspPI GGATC 5 cut(s) 275, 1832, 2012, 2025, 2200
BspTNI GGTCTC 2 cut(s) 1092, 1139
BsrDI GCAATG 3 cut(s) 1522, 1603, 2082
BsrFI RCCGGY 2 cut(s) 185, 1856
BsrI ACTGG 2 cut(s) 1210, 2194
BssAI RCCGGY 2 cut(s) 185, 1856
BssECI CCNNGG 6 cut(s) 382, 565, 1375, 1530, 2021, 2238
BssMI GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
BssNAI GTATAC 1 cut(s) 1338
BssNI GRCGYC 1 cut(s) 291
BssSI CACGAG 2 cut(s) 243, 2166
BssT1I CCWWGG 2 cut(s) 1375, 1530
Bst1107I GTATAC 1 cut(s) 1338
Bst2BI CACGAG 2 cut(s) 243, 2166
Bst2UI CCWGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
Bst4CI ACNGT 5 cut(s) 107, 652, 865, 1142, 1369
Bst6I CTCTTC 1 cut(s) 779
BstACI GRCGYC 1 cut(s) 291
BstC8I GCNNGC 3 cut(s) 700, 1823, 1862
BstDEI CTNAG 7 cut(s) 135, 261, 595, 789, 954, 1842, 2103
BstDSI CCRYGG 2 cut(s) 1375, 1530
BstF5I GGATG 2 cut(s) 428, 847
BstH2I RGCGCY 1 cut(s) 595
BstHHI GCGC 1 cut(s) 594
BstKTI GATC 9 cut(s) 61, 270, 376, 1053, 1162, 1310, 1840, 2020, 2195
BstMAI GTCTC 3 cut(s) 1092, 1139, 2128
BstMBI GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
BstMWI GCNNNNNNNGC 5 cut(s) 96, 799, 1751, 2060, 2162
BstNI CCWGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
BstSCI CCNGG 8 cut(s) 381, 565, 587, 737, 1257, 1740, 1825, 2054
BstSFI CTRYAG 5 cut(s) 233, 681, 747, 1141, 2154
BstV1I GCAGC 4 cut(s) 780, 859, 1033, 2140
BstV2I GAAGAC 1 cut(s) 1041
BstX2I RGATCY 1 cut(s) 2017
BstXI CCANNNNNNTGG 1 cut(s) 2189
BstYI RGATCY 1 cut(s) 2017
BstZ17I GTATAC 1 cut(s) 1338
Bsu36I CCTNAGG 1 cut(s) 261
BsuI GTATCC 3 cut(s) 1430, 1636, 1823
BsuRI GGCC 5 cut(s) 535, 809, 1684, 1764, 2110
BtgI CCRYGG 2 cut(s) 1375, 1530
BtrI CACGTC 1 cut(s) 1042
BtsCI GGATG 2 cut(s) 428, 847
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 39, 411, 1374
BveI ACCTGC 1 cut(s) 226
Cac8I GCNNGC 3 cut(s) 700, 1823, 1862
CaiI CAGNNNCTG 1 cut(s) 602
CciI TCATGA 2 cut(s) 1053, 1948
CfoI GCGC 1 cut(s) 594
Cfr10I RCCGGY 2 cut(s) 185, 1856
Cfr13I GGNCC 1 cut(s) 386
Csp6I GTAC 6 cut(s) 303, 639, 653, 674, 1372, 1846
CspAI ACCGGT 1 cut(s) 185
CspCI CAANNNNNGTGG 4 cut(s) 861, 896, 1795, 1830
CviQI GTAC 6 cut(s) 303, 639, 653, 674, 1372, 1846
DdeI CTNAG 7 cut(s) 135, 261, 595, 789, 954, 1842, 2103
DpnI GATC 9 cut(s) 60, 269, 375, 1052, 1161, 1309, 1839, 2019, 2194
DpnII GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
Eam1104I CTCTTC 1 cut(s) 779
EarI CTCTTC 1 cut(s) 779
Ecl136II GAGCTC 1 cut(s) 1980
Eco130I CCWWGG 2 cut(s) 1375, 1530
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 2 cut(s) 500, 1982
Eco31I GGTCTC 2 cut(s) 1092, 1139
Eco32I GATATC 1 cut(s) 1935
Eco47I GGWCC 1 cut(s) 386
Eco53kI GAGCTC 1 cut(s) 1980
Eco57I CTGAAG 1 cut(s) 788
Eco81I CCTNAGG 1 cut(s) 261
EcoICRI GAGCTC 1 cut(s) 1980
EcoO109I RGGNCCY 1 cut(s) 386
EcoRII CCWGG 8 cut(s) 381, 565, 587, 737, 1257, 1740, 1825, 2054
EcoRV GATATC 1 cut(s) 1935
EcoT14I CCWWGG 2 cut(s) 1375, 1530
EcoT22I ATGCAT 1 cut(s) 783
EcoT38I GRGCYC 2 cut(s) 500, 1982
ErhI CCWWGG 2 cut(s) 1375, 1530
FalI AAGNNNNNCTT 2 cut(s) 2132, 2164
FaqI GGGAC 1 cut(s) 399
FauI CCCGC 1 cut(s) 421
FauNDI CATATG 1 cut(s) 1800
FbaI TGATCA 1 cut(s) 1159
FblI GTMKAC 5 cut(s) 288, 996, 1337, 1542, 1624
Fnu4HI GCNGC 5 cut(s) 794, 848, 1047, 1318, 2154
FokI GGATG 2 cut(s) 415, 854
FriOI GRGCYC 2 cut(s) 500, 1982
Fsp4HI GCNGC 5 cut(s) 794, 848, 1047, 1318, 2154
FspBI CTAG 8 cut(s) 297, 584, 618, 1497, 1502, 1770, 1920, 2072
GlaI GCGC 1 cut(s) 593
GluI GCNGC 5 cut(s) 794, 848, 1047, 1318, 2154
HaeII RGCGCY 1 cut(s) 595
HaeIII GGCC 5 cut(s) 535, 809, 1684, 1764, 2110
HapII CCGG 5 cut(s) 186, 250, 501, 1217, 1857
HhaI GCGC 1 cut(s) 594
Hin1I GRCGYC 1 cut(s) 291
Hin6I GCGC 1 cut(s) 592
HinP1I GCGC 1 cut(s) 592
HincII GTYRAC 2 cut(s) 1068, 2047
HindII GTYRAC 2 cut(s) 1068, 2047
HinfI GANTC 6 cut(s) 122, 401, 572, 1154, 1170, 1571
HpaI GTTAAC 1 cut(s) 2047
HpaII CCGG 5 cut(s) 186, 250, 501, 1217, 1857
HphI GGTGA 6 cut(s) 581, 869, 900, 1154, 1598, 1987
Hpy99I CGWCG 1 cut(s) 1043
HpyAV CCTTC 5 cut(s) 184, 468, 1088, 1124, 2053
HpyCH4III ACNGT 5 cut(s) 107, 652, 865, 1142, 1369
HpyCH4IV ACGT 3 cut(s) 291, 1041, 1621
HpyF10VI GCNNNNNNNGC 5 cut(s) 96, 799, 1751, 2060, 2162
HpyF3I CTNAG 7 cut(s) 135, 261, 595, 789, 954, 1842, 2103
HpySE526I ACGT 3 cut(s) 291, 1041, 1621
Hsp92I GRCGYC 1 cut(s) 291
HspAI GCGC 1 cut(s) 592
Kpn2I TCCGGA 2 cut(s) 249, 500
Ksp22I TGATCA 1 cut(s) 1159
KspAI GTTAAC 1 cut(s) 2047
Kzo9I GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
LmnI GCTCC 5 cut(s) 252, 503, 1114, 1985, 2230
Lsp1109I GCAGC 4 cut(s) 780, 859, 1033, 2140
LweI GCATC 5 cut(s) 28, 157, 437, 614, 1401
MaeI CTAG 8 cut(s) 297, 584, 618, 1497, 1502, 1770, 1920, 2072
MaeII ACGT 3 cut(s) 291, 1041, 1621
MaeIII GTNAC 8 cut(s) 238, 278, 292, 406, 556, 915, 2128, 2218
MalI GATC 9 cut(s) 60, 269, 375, 1052, 1161, 1309, 1839, 2019, 2194
MboI GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
MboII GAAGA 6 cut(s) 766, 937, 1046, 1093, 1096, 1420
MflI RGATCY 1 cut(s) 2017
MhlI GDGCHC 5 cut(s) 39, 500, 1111, 1948, 1982
MmeI TCCRAC 1 cut(s) 1486
Mph1103I ATGCAT 1 cut(s) 783
MroI TCCGGA 2 cut(s) 249, 500
MroXI GAANNNNTTC 2 cut(s) 447, 1010
MslI CAYNNNNRTG 4 cut(s) 476, 1380, 1701, 1799
MspA1I CMGCKG 2 cut(s) 1292, 1811
MspI CCGG 5 cut(s) 186, 250, 501, 1217, 1857
MspR9I CCNGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
Mva1269I GAATGC 2 cut(s) 824, 2150
MvaI CCWGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
MwoI GCNNNNNNNGC 5 cut(s) 96, 799, 1751, 2060, 2162
NcoI CCATGG 2 cut(s) 1375, 1530
NdeI CATATG 1 cut(s) 1800
NdeII GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
NlaIV GGNNCC 3 cut(s) 387, 499, 2019
NmeAIII GCCGAG 1 cut(s) 2219
NmuCI GTSAC 3 cut(s) 292, 406, 2128
NsiI ATGCAT 1 cut(s) 783
PagI TCATGA 2 cut(s) 1053, 1948
PceI AGGCCT 1 cut(s) 535
PctI GAATGC 2 cut(s) 824, 2150
PdmI GAANNNNTTC 2 cut(s) 447, 1010
PfeI GAWTC 6 cut(s) 122, 401, 572, 1154, 1170, 1571
PflMI CCANNNNNTGG 1 cut(s) 1787
PfoI TCCNGGA 1 cut(s) 737
PinAI ACCGGT 1 cut(s) 185
PkrI GCNGC 5 cut(s) 795, 849, 1048, 1319, 2155
PpuMI RGGWCCY 1 cut(s) 386
PshBI ATTAAT 2 cut(s) 981, 2214
Psp124BI GAGCTC 1 cut(s) 1982
Psp5II RGGWCCY 1 cut(s) 386
Psp6I CCWGG 8 cut(s) 381, 565, 587, 737, 1257, 1740, 1825, 2054
PspGI CCWGG 8 cut(s) 381, 565, 587, 737, 1257, 1740, 1825, 2054
PspN4I GGNNCC 3 cut(s) 387, 499, 2019
PspPI GGNCC 1 cut(s) 386
PspPPI RGGWCCY 1 cut(s) 386
PstI CTGCAG 2 cut(s) 237, 2158
PstNI CAGNNNCTG 1 cut(s) 602
PsuI RGATCY 1 cut(s) 2017
PvuII CAGCTG 2 cut(s) 1292, 1811
RsaI GTAC 6 cut(s) 304, 640, 654, 675, 1373, 1847
RsaNI GTAC 6 cut(s) 303, 639, 653, 674, 1372, 1846
RseI CAYNNNNRTG 4 cut(s) 476, 1380, 1701, 1799
SacI GAGCTC 1 cut(s) 1982
SatI GCNGC 5 cut(s) 794, 848, 1047, 1318, 2154
Sau3AI GATC 9 cut(s) 58, 267, 373, 1050, 1159, 1307, 1837, 2017, 2192
Sau96I GGNCC 1 cut(s) 386
ScrFI CCNGG 8 cut(s) 383, 567, 589, 739, 1259, 1742, 1827, 2056
SduI GDGCHC 5 cut(s) 39, 500, 1111, 1948, 1982
SfaNI GCATC 5 cut(s) 28, 157, 437, 614, 1401
SfcI CTRYAG 5 cut(s) 233, 681, 747, 1141, 2154
SgrAI CRCCGGYG 1 cut(s) 185
SinI GGWCC 1 cut(s) 386
SmiMI CAYNNNNRTG 4 cut(s) 476, 1380, 1701, 1799
SmlI CTYRAG 2 cut(s) 1431, 1609
SmoI CTYRAG 2 cut(s) 1431, 1609
SpeI ACTAGT 2 cut(s) 296, 1496
SseBI AGGCCT 1 cut(s) 535
SsiI CCGC 3 cut(s) 414, 1317, 2031
SspI AATATT 2 cut(s) 767, 1720
SspMI CTAG 8 cut(s) 297, 584, 618, 1497, 1502, 1770, 1920, 2072
SstI GAGCTC 1 cut(s) 1982
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 8 cut(s) 381, 565, 587, 737, 1257, 1740, 1825, 2054
StyI CCWWGG 2 cut(s) 1375, 1530
TaaI ACNGT 5 cut(s) 107, 652, 865, 1142, 1369
TaiI ACGT 3 cut(s) 294, 1044, 1624
TaqI TCGA 2 cut(s) 180, 990
TauI GCSGC 1 cut(s) 1320
TfiI GAWTC 6 cut(s) 122, 401, 572, 1154, 1170, 1571
TscAI CASTG 3 cut(s) 39, 411, 1374
TseFI GTSAC 3 cut(s) 292, 406, 2128
TseI GCWGC 4 cut(s) 793, 847, 1046, 2153
Tsp45I GTSAC 3 cut(s) 292, 406, 2128
TspGWI ACGGA 1 cut(s) 1089
TspRI CASTG 3 cut(s) 39, 411, 1374
Van91I CCANNNNNTGG 1 cut(s) 1787
VpaK11BI GGWCC 1 cut(s) 386
VspI ATTAAT 2 cut(s) 981, 2214
XapI RAATTY 4 cut(s) 527, 1445, 1564, 1735
XbaI TCTAGA 1 cut(s) 1769
XmiI GTMKAC 5 cut(s) 288, 996, 1337, 1542, 1624
XmnI GAANNNNTTC 2 cut(s) 447, 1010
XspI CTAG 8 cut(s) 297, 584, 618, 1497, 1502, 1770, 1920, 2072
ZraI GACGTC 1 cut(s) 292
Zsp2I ATGCAT 1 cut(s) 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.