RchiOBHm_Chr2g0141701

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
59236053 .. 59237066
1014 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51195

Sequence Viewer

Length: 645 bp
ATGCACAGTAATCATATTTACATGCACTTTGCAGAAATAGAAAAGCTCCAAGCGAACGAGTCTAGACAATTCAATATTACTTTTAATGGAGAGCCCTTTTATGGGCCCTCTTCTCCTGGATACATGTCCGCCACTACTATTTATAGCCGAGAGGCTTGGAGTCCAACAGGACAATATATAAATTTTTCCATCTTCAAGGATGAGAACTCTACCCTTCCACCTATCCTCAATGCTTATGAAATATATATGGTCAAGCCAGCTCCCCAATCAGCGACAAACCATGACGACATTGACGCGATCACAAACATCCAGTCAACTTATAAAATTACAAGAATCTGGCAAGGAGATCCATGTGCCCCCCAAAACTACTCTTGGGAAGGCTTGAAGTGTAGCTATCCTGAAGACTTCCCAAGAACAATATCCTTGGACTTGTCCTCAAGTGGAATAACAGGGGAGATATCACTTTCTATATCCAATCTCACAATGATAAAGACTTTAGAATTATCAAACAACAACTTGAGAGGATCAATTCCAGAGTTTTTGTCTCAGTTACCAGAATTAGAAGTTTTGGAAGTTACTAATTTTGATACACATAGCCTAAAGAGTCAAGTTTTTGTTACAATTAAGAGTCAAGATTTATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

214

Amino Acids

24.18

Weight (kDa)

4.78

Isoelectric Point (pI)

57.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 5 - 84 1.1e-20 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 321
AccII CGCG 1 cut(s) 296
AciI CCGC 1 cut(s) 129
AclWI GGATC 2 cut(s) 341, 532
AcsI RAATTY 1 cut(s) 181
AcuI CTGAAG 1 cut(s) 420
AfiI CCNNNNNNNGG 2 cut(s) 101, 102
AflIII ACRYGT 1 cut(s) 123
AgsI TTSAA 3 cut(s) 73, 196, 385
AjnI CCWGG 1 cut(s) 115
AluBI AGCT 3 cut(s) 46, 260, 393
AluI AGCT 3 cut(s) 46, 260, 393
Alw26I GTCTC 1 cut(s) 549
AlwI GGATC 2 cut(s) 341, 532
AoxI GGCC 1 cut(s) 104
ApaI GGGCCC 1 cut(s) 108
ApoI RAATTY 1 cut(s) 181
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
AspS9I GGNCC 2 cut(s) 104, 105
BaeGI GKGCMC 2 cut(s) 108, 358
BanII GRGCYC 2 cut(s) 96, 108
BbsI GAAGAC 1 cut(s) 408
BccI CCATC 1 cut(s) 197
BciT130I CCWGG 1 cut(s) 117
BciVI GTATCC 1 cut(s) 113
BcoDI GTCTC 1 cut(s) 549
BfaI CTAG 1 cut(s) 63
BfuI GTATCC 1 cut(s) 113
Bme1390I CCNGG 1 cut(s) 117
BmgT120I GGNCC 2 cut(s) 104, 105
BmiI GGNNCC 1 cut(s) 106
BmrFI CCNGG 1 cut(s) 117
BpiI GAAGAC 1 cut(s) 408
BpuEI CTTGAG 2 cut(s) 421, 538
BsaJI CCNNGG 1 cut(s) 423
Bsc4I CCNNNNNNNGG 2 cut(s) 101, 102
Bse1I ACTGG 1 cut(s) 310
BseBI CCWGG 1 cut(s) 117
BseDI CCNNGG 1 cut(s) 423
BseGI GGATG 2 cut(s) 205, 306
BseLI CCNNNNNNNGG 2 cut(s) 101, 102
BseMII CTCAG 1 cut(s) 560
BseNI ACTGG 1 cut(s) 310
BseSI GKGCMC 2 cut(s) 108, 358
Bsh1236I CGCG 1 cut(s) 296
BshFI GGCC 1 cut(s) 106
BslI CCNNNNNNNGG 2 cut(s) 101, 102
BsmAI GTCTC 1 cut(s) 549
BsnI GGCC 1 cut(s) 106
Bsp120I GGGCCC 1 cut(s) 104
Bsp1286I GDGCHC 3 cut(s) 96, 108, 358
Bsp143I GATC 3 cut(s) 297, 346, 524
BspACI CCGC 1 cut(s) 129
BspANI GGCC 1 cut(s) 106
BspCNI CTCAG 1 cut(s) 559
BspFNI CGCG 1 cut(s) 296
BspLI GGNNCC 1 cut(s) 106
BspPI GGATC 2 cut(s) 341, 532
BsrI ACTGG 1 cut(s) 310
BssECI CCNNGG 1 cut(s) 423
BssMI GATC 3 cut(s) 297, 346, 524
BssT1I CCWWGG 1 cut(s) 423
Bst2UI CCWGG 1 cut(s) 117
Bst4CI ACNGT 1 cut(s) 8
Bst6I CTCTTC 1 cut(s) 115
BstC8I GCNNGC 1 cut(s) 258
BstDEI CTNAG 1 cut(s) 546
BstF5I GGATG 2 cut(s) 205, 306
BstFNI CGCG 1 cut(s) 296
BstKTI GATC 3 cut(s) 300, 349, 527
BstMAI GTCTC 1 cut(s) 549
BstMBI GATC 3 cut(s) 297, 346, 524
BstNI CCWGG 1 cut(s) 117
BstNSI RCATGY 2 cut(s) 25, 127
BstSCI CCNGG 1 cut(s) 115
BstSLI GKGCMC 2 cut(s) 108, 358
BstUI CGCG 1 cut(s) 296
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 346
BstYI RGATCY 1 cut(s) 346
BsuI GTATCC 1 cut(s) 113
BsuRI GGCC 1 cut(s) 106
BtsCI GGATG 2 cut(s) 205, 306
Cac8I GCNNGC 1 cut(s) 258
Cfr13I GGNCC 2 cut(s) 104, 105
CseI GACGC 1 cut(s) 302
CviAII CATG 4 cut(s) 22, 124, 281, 351
DdeI CTNAG 1 cut(s) 546
DpnI GATC 3 cut(s) 299, 348, 526
DpnII GATC 3 cut(s) 297, 346, 524
Eam1104I CTCTTC 1 cut(s) 115
EarI CTCTTC 1 cut(s) 115
EciI GGCGGA 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 423
Eco24I GRGCYC 2 cut(s) 96, 108
Eco32I GATATC 1 cut(s) 459
Eco57I CTGAAG 1 cut(s) 420
EcoO109I RGGNCCY 1 cut(s) 105
EcoRII CCWGG 1 cut(s) 115
EcoRV GATATC 1 cut(s) 459
EcoT14I CCWWGG 1 cut(s) 423
EcoT38I GRGCYC 2 cut(s) 96, 108
ErhI CCWWGG 1 cut(s) 423
FaeI CATG 4 cut(s) 25, 127, 284, 354
FatI CATG 4 cut(s) 21, 123, 280, 350
FokI GGATG 2 cut(s) 212, 293
FriOI GRGCYC 2 cut(s) 96, 108
FspBI CTAG 1 cut(s) 63
HaeIII GGCC 1 cut(s) 106
HgaI GACGC 1 cut(s) 302
Hin1II CATG 4 cut(s) 25, 127, 284, 354
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HinfI GANTC 5 cut(s) 59, 160, 333, 604, 628
Hpy166II GTNNAC 1 cut(s) 315
Hpy188III TCNNGA 4 cut(s) 63, 398, 533, 632
Hpy8I GTNNAC 1 cut(s) 315
HpyAV CCTTC 2 cut(s) 224, 371
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4V TGCA 3 cut(s) 4, 25, 32
HpyF3I CTNAG 1 cut(s) 546
Hsp92II CATG 4 cut(s) 25, 127, 284, 354
Kzo9I GATC 3 cut(s) 297, 346, 524
LmnI GCTCC 2 cut(s) 51, 265
MaeI CTAG 1 cut(s) 63
MaeIII GTNAC 3 cut(s) 549, 574, 616
MalI GATC 3 cut(s) 299, 348, 526
MboI GATC 3 cut(s) 297, 346, 524
MboII GAAGA 3 cut(s) 102, 184, 413
MflI RGATCY 1 cut(s) 346
MhlI GDGCHC 3 cut(s) 96, 108, 358
MluCI AATT 8 cut(s) 68, 181, 324, 500, 528, 557, 580, 621
MlyI GAGTC 4 cut(s) 68, 169, 613, 637
MmeI TCCRAC 1 cut(s) 188
MnlI CCTC 5 cut(s) 118, 145, 236, 445, 515
MseI TTAA 3 cut(s) 84, 624, 643
MspR9I CCNGG 1 cut(s) 117
MvaI CCWGG 1 cut(s) 117
MvnI CGCG 1 cut(s) 296
NdeII GATC 3 cut(s) 297, 346, 524
NlaIII CATG 4 cut(s) 25, 127, 284, 354
NlaIV GGNNCC 1 cut(s) 106
NmeAIII GCCGAG 1 cut(s) 173
NspI RCATGY 2 cut(s) 25, 127
PciI ACATGT 1 cut(s) 123
PfeI GAWTC 1 cut(s) 333
PfoI TCCNGGA 1 cut(s) 115
PleI GAGTC 4 cut(s) 67, 168, 612, 636
PpsI GAGTC 4 cut(s) 67, 168, 612, 636
PscI ACATGT 1 cut(s) 123
PsiI TTATAA 1 cut(s) 321
Psp6I CCWGG 1 cut(s) 115
PspGI CCWGG 1 cut(s) 115
PspN4I GGNNCC 1 cut(s) 106
PspOMI GGGCCC 1 cut(s) 104
PspPI GGNCC 2 cut(s) 104, 105
PsuI RGATCY 1 cut(s) 346
SaqAI TTAA 3 cut(s) 84, 624, 643
Sau3AI GATC 3 cut(s) 297, 346, 524
Sau96I GGNCC 2 cut(s) 104, 105
SchI GAGTC 4 cut(s) 68, 169, 613, 637
ScrFI CCNGG 1 cut(s) 117
SduI GDGCHC 3 cut(s) 96, 108, 358
SetI ASST 4 cut(s) 48, 223, 262, 395
SmlI CTYRAG 2 cut(s) 436, 517
SmoI CTYRAG 2 cut(s) 436, 517
Sse9I AATT 8 cut(s) 68, 181, 324, 500, 528, 557, 580, 621
SsiI CCGC 1 cut(s) 129
SspI AATATT 1 cut(s) 76
SspMI CTAG 1 cut(s) 63
StyD4I CCNGG 1 cut(s) 115
StyI CCWWGG 1 cut(s) 423
TaaI ACNGT 1 cut(s) 8
TasI AATT 8 cut(s) 68, 181, 324, 500, 528, 557, 580, 621
TfiI GAWTC 1 cut(s) 333
Tru1I TTAA 3 cut(s) 84, 624, 643
Tru9I TTAA 3 cut(s) 84, 624, 643
TspDTI ATGAA 1 cut(s) 252
XapI RAATTY 1 cut(s) 181
XbaI TCTAGA 1 cut(s) 62
XceI RCATGY 2 cut(s) 25, 127
XspI CTAG 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.