Prupe.3G056000_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3972221 .. 3976858
4638 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G056000.2

Sequence Viewer

Length: 2679 bp
ATGTCTAGCTTAAATCTGTGTCTTGCTTCTCAAAGTTTAATGATGTCGCGTACAATCAAGCAATTCCTCTTCACACTGCACCTTGGTCTTAGTCTTCTGCTCCTAGTTCATGCCCAGGATGATCAATCAGAATTCATGAGCATAGACTGTGGCCTGCAGAAAGTTACCTATACCGAAACGACAACAAAAATTCGCTACATCTCAGACGCAAGCTTCATAGACACCGGTGAAAGTAAATCCGTGTTGAATAAGTTTAGAGATGACTATCAACAACCCTACTGGTCTCTAAGGAGCTTCCCTGAAGGAACCAGGAACTGCTACAACATAAACGTCACAAGTGGCATCAAATATTTGATCAGAGCAAGTTTTGTTTATGGGAATTATGATGGCCAAGAAAAAGTACCCGAGTTCGAACTCCATCTTGGAGCTAATTTATGGGAGTCCATACGGTTTGAGAATGCCTCCGTTGCAGAAGCACACAAAGAACTTATACATGTCCCGCTGCGAAGCTACATACATGTCTGTCTTGTGAACACAGGCTCCGGCGTTCCATTTATATCGGCAATAGAACTCAGGCCTTTAATTAATGCATCTTATCCAACACAAGTGGGGTCGTTGGCGCTTGAGATGCGATTTGATACTGGTCGAGTACCAACTGATTTGGAAGGATACAGGTATCCGTTCGATGTTCATGATCGCTTCTGGAATGCCTATGACCGTGATGATTGGACACAATTAAGTACATCACAGACCATTGACTCTGGATCTAGCAATGATTATCAACCACCTCCTATTGTGATGCGTACTGCTGCAACGCCAAGACGTGCGAATGCTTCCTTGGATTTCTTCTGGCTGCCTGCTGATGACAAGGCATCATACTATGTATACATGCACTTTGCAGAAGTTGAAAATCTACGAGCAAACCAATCCAGACTGCAATACATTACTAGGAACGGGCAGGTCTTTTATGAGTTATTTGCTCCCGATTACTTGTACACAAATACTATTTTTAGCCGTGCCGCTTTGAGTGGAGGACAATATAATTTTTCAATCCGTAAGGCAGAGAACTCTACCCTTCCACCCATCCTCAACGCCATTGAGATTTACACATTGAAGGAATTCTTAGAGTTAGAAACAAACCAAGAAGATATTGACGCAATCAACATCATCAAGTCAACATATAAGATTAAAAAGAACTGGCAAGGAGATCCATGTGCCCCTCAAGCTTACTTGTGGGAAGGTGTAAAGTGTAGCTATCCTCAAAATGAGTCCCCAAGAATCATATCCTTGGACTTGTCCTCGAGCGGATTAACAGGGGAGATAGCTCCTTCTATATCCAACCTTACAGTGATTCAGACATTGGATTTATCAAACAACAACTTGACAGGACCAATTCCTGACTTTTTGTCTCAATTGCCAGACTTAAATGTCATAAACTTGGAGAAAAACAAGCTCACAGGCTCAGTTCCAGGAGCACTGATTGAAAGAAGGAAGAATGGTTTTCTATCATTAAGTTTGTGTGCAAATCCAAATCTATCTGGAAATGTTTCTTGCAAAAAGAAGCGCAATTTTGTTATTCCCGTAGTTGCGTCGGTCGCTGGAATCTCCATCCTCTTATTATCTGTAGCAACTCTCTGTTGGGGCATTAAACGGAAAAGACAACCTGGAGCTGTCACAGGTGCAAATCCTATCATTGCACCAGTGGAGGCAACAAAACGACAGTTTACATACTCTGAGATCCTCCAGATCACCAACAATTTAAAGAGGATTCTTGGCAAAGGTGGATTTGGAACAGTTTATCATGGATGCATAGACAAAACTCAAGTAGCTGTCAAGATGCTTTCACCGTCTTCAGTTCAAGGGCTTCAACAATTTCATGCTGAGGTTAATCTTCTGATGAGAGTTCATCATATTAACTTGACAAGCCTTGTAGGATATTGCAATGAGGAAAATCACATAGGGCTTGTGTACGAGTACATGGAAAATGGAAACTTACAAGCATATCTATCAGACAGCACTCCAGTTGTCTTGACTTGGGAAGGTAGACTTCAAATAGCTACAGATGCTGCACAAGGATTGGAGTATCTGCACTATTGTTGTAGCCCACCTATGATCCACAGGGATGTGAAATCAACAAACATCTTGTTGAATGAATATTTTCAAGCCAAACTATCTGATTTTGGCCTATCCAGAAATTTCCCTGTAGAGGATGGGACTCATATATTGACAGGTGTTGCTGGCACTCCCGGGTACCTTGCGCCCGAGTACAATATGTCAAACAGGCTAAATGAGAAAAGTGATGTTTACAGCTTTGGGGTTGTACTGTTGGAGATTATCGTGGGTCGACCTGCTTTTATAAACACACATGAGAGAATTCACATAAGTAAATGGGTTGGTTTGTTGCTTCCAAAAGGAGACATTTACAGCATTGTTGATCCAAGGTTAGAGAGACGTTTCAATGTTAGCTCTGTCTGGAAAGCTGTGGAATTAGCAATGGCATGTGTATCTAAAAACCCCATCAACAGGCCATCCATGAGCCAGGTATTGGTGGAACTAAAGGAGTGTTTGGCAACCGAACTGGCTCGAACAAAGCAGAGCGGCAATCACACTGAAATAGGAAATTCCATTGAGATGATGTCTCAGAATTCAATCGCTATGCTACGTCCCTCAGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

893

Amino Acids

100.0

Weight (kDa)

6.47

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2357
AasI GACNNNNNNGTC 1 cut(s) 1427
Acc36I ACCTGC 2 cut(s) 949, 2356
Acc65I GGTACC 1 cut(s) 2250
AccB1I GGYRCC 1 cut(s) 2250
AccB7I CCANNNNNTGG 1 cut(s) 2545
AccBSI CCGCTC 2 cut(s) 1305, 2598
AccI GTMKAC 3 cut(s) 885, 2044, 2344
AccII CGCG 1 cut(s) 49
AciI CCGC 4 cut(s) 500, 1020, 1305, 2598
AclWI GGATC 5 cut(s) 772, 1202, 1732, 2107, 2429
AcoI YGGCCR 1 cut(s) 388
AcsI RAATTY 7 cut(s) 131, 189, 1118, 2194, 2373, 2620, 2644
AcuI CTGAAG 2 cut(s) 321, 1836
AfiI CCNNNNNNNGG 4 cut(s) 2206, 2523, 2545, 2673
AflIII ACRYGT 2 cut(s) 493, 517
AgeI ACCGGT 1 cut(s) 224
AhdI GACNNNNNGTC 1 cut(s) 1405
AjiI CACGTC 1 cut(s) 824
AjnI CCWGG 5 cut(s) 114, 308, 1468, 1663, 2538
AjuI GAANNNNNNNTTGG 4 cut(s) 405, 437, 821, 853
AloI GAACNNNNNNTCC 2 cut(s) 524, 556
Alw21I GWGCWC 1 cut(s) 1477
Alw26I GTCTC 5 cut(s) 288, 1413, 2409, 2443, 2643
AlwI GGATC 5 cut(s) 772, 1202, 1732, 2107, 2429
AlwNI CAGNNNCTG 2 cut(s) 315, 2066
Ama87I CYCGRG 4 cut(s) 404, 1300, 2246, 2261
AoxI GGCC 5 cut(s) 151, 388, 575, 2182, 2525
ApeKI GCWGC 4 cut(s) 502, 809, 853, 2066
ApoI RAATTY 7 cut(s) 131, 189, 1118, 2194, 2373, 2620, 2644
AseI ATTAAT 1 cut(s) 585
AsiGI ACCGGT 1 cut(s) 224
Asp700I GAANNNNTTC 3 cut(s) 1118, 1546, 2157
Asp718I GGTACC 1 cut(s) 2250
AspLEI GCGC 3 cut(s) 622, 1566, 2260
AspS9I GGNCC 1 cut(s) 1388
AsuC2I CCSGG 2 cut(s) 2247, 2248
AsuHPI GGTGA 3 cut(s) 239, 1741, 1836
AsuII TTCGAA 1 cut(s) 411
AvaI CYCGRG 4 cut(s) 404, 1300, 2246, 2261
AvaII GGWCC 1 cut(s) 1388
BaeGI GKGCMC 1 cut(s) 1219
BalI TGGCCA 1 cut(s) 390
BanI GGYRCC 1 cut(s) 2250
BbsI GAAGAC 2 cut(s) 86, 1842
Bbv12I GWGCWC 1 cut(s) 1477
BbvCI CCTCAGC 1 cut(s) 1881
BbvI GCAGC 4 cut(s) 489, 796, 840, 2053
BccI CCATC 7 cut(s) 380, 426, 1091, 1616, 2204, 2525, 2536
BceAI ACGGC 1 cut(s) 999
BciT130I CCWGG 5 cut(s) 116, 310, 1470, 1665, 2540
BciVI GTATCC 2 cut(s) 662, 687
BclI TGATCA 2 cut(s) 121, 354
BcnI CCSGG 2 cut(s) 2247, 2248
BcoDI GTCTC 5 cut(s) 288, 1413, 2409, 2443, 2643
BfaI CTAG 4 cut(s) 6, 104, 768, 948
BfmI CTRYAG 4 cut(s) 155, 1623, 2058, 2202
BfoI RGCGCY 1 cut(s) 623
BfuAI ACCTGC 2 cut(s) 949, 2356
BfuI GTATCC 2 cut(s) 662, 687
BisI GCNGC 6 cut(s) 503, 810, 854, 1020, 2067, 2599
BlsI GCNGC 6 cut(s) 504, 811, 855, 1021, 2068, 2600
Bme1390I CCNGG 7 cut(s) 116, 310, 1470, 1665, 2247, 2248, 2540
Bme18I GGWCC 1 cut(s) 1388
BmeRI GACNNNNNGTC 1 cut(s) 1405
BmeT110I CYCGRG 4 cut(s) 404, 1300, 2246, 2261
BmgBI CACGTC 1 cut(s) 824
BmgT120I GGNCC 1 cut(s) 1388
BmiI GGNNCC 3 cut(s) 307, 541, 2252
BmrFI CCNGG 7 cut(s) 116, 310, 1470, 1665, 2247, 2248, 2540
BmsI GCATC 8 cut(s) 351, 599, 618, 789, 881, 1796, 1827, 2053
BpiI GAAGAC 2 cut(s) 86, 1842
BplI GAGNNNNNCTC 2 cut(s) 446, 478
BpmI CTGGAG 3 cut(s) 1686, 1727, 2004
Bpu10I CCTNAGC 1 cut(s) 1881
Bpu14I TTCGAA 1 cut(s) 411
BpuEI CTTGAG 3 cut(s) 644, 1206, 1806
BpuMI CCSGG 2 cut(s) 2247, 2248
BsaBI GATNNNNATC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 288
BsaJI CCNNGG 6 cut(s) 82, 114, 837, 1287, 2246, 2438
BsaWI WCCGGW 1 cut(s) 224
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bsc4I CCNNNNNNNGG 4 cut(s) 2206, 2523, 2545, 2673
Bse118I RCCGGY 1 cut(s) 224
Bse1I ACTGG 6 cut(s) 284, 646, 1202, 1700, 2021, 2583
Bse3DI GCAATG 4 cut(s) 778, 1692, 1948, 2499
Bse8I GATNNNNATC 1 cut(s) 264
BseBI CCWGG 5 cut(s) 116, 310, 1470, 1665, 2540
BseDI CCNNGG 6 cut(s) 82, 114, 837, 1287, 2246, 2438
BseGI GGATG 7 cut(s) 124, 1083, 1608, 1811, 2128, 2215, 2528
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 4 cut(s) 2206, 2523, 2545, 2673
BseMI GCAATG 4 cut(s) 778, 1692, 1948, 2499
BseMII CTCAG 6 cut(s) 216, 586, 1476, 1725, 1872, 2654
BseNI ACTGG 6 cut(s) 284, 646, 1202, 1700, 2021, 2583
BseSI GKGCMC 1 cut(s) 1219
BseXI GCAGC 4 cut(s) 489, 796, 840, 2053
BsgI GTGCAG 3 cut(s) 62, 2052, 2072
Bsh1236I CGCG 1 cut(s) 49
Bsh1285I CGRYCG 1 cut(s) 1596
BshFI GGCC 5 cut(s) 153, 390, 577, 2184, 2527
BshNI GGYRCC 1 cut(s) 2250
BshTI ACCGGT 1 cut(s) 224
BsiEI CGRYCG 1 cut(s) 1596
BsiHKAI GWGCWC 1 cut(s) 1477
BsiHKCI CYCGRG 4 cut(s) 404, 1300, 2246, 2261
BsiSI CCGG 3 cut(s) 225, 543, 2247
BslFI GGGAC 4 cut(s) 482, 1255, 2227, 2649
BslI CCNNNNNNNGG 4 cut(s) 2206, 2523, 2545, 2673
BsmAI GTCTC 5 cut(s) 288, 1413, 2409, 2443, 2643
BsmBI CGTCTC 1 cut(s) 2443
BsmFI GGGAC 4 cut(s) 482, 1255, 2227, 2649
BsmI GAATGC 3 cut(s) 463, 712, 835
BsnI GGCC 5 cut(s) 153, 390, 577, 2184, 2527
Bso31I GGTCTC 1 cut(s) 288
BsoBI CYCGRG 4 cut(s) 404, 1300, 2246, 2261
Bsp119I TTCGAA 1 cut(s) 411
Bsp1286I GDGCHC 2 cut(s) 1219, 1477
Bsp1407I TGTACA 1 cut(s) 993
Bsp143I GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
BspACI CCGC 4 cut(s) 500, 1020, 1305, 2598
BspANI GGCC 5 cut(s) 153, 390, 577, 2184, 2527
BspCNI CTCAG 6 cut(s) 215, 585, 1475, 1726, 1873, 2653
BspFNI CGCG 1 cut(s) 49
BspHI TCATGA 2 cut(s) 135, 691
BspLI GGNNCC 3 cut(s) 307, 541, 2252
BspMAI CTGCAG 1 cut(s) 159
BspMI ACCTGC 2 cut(s) 949, 2356
BspPI GGATC 5 cut(s) 772, 1202, 1732, 2107, 2429
BspT104I TTCGAA 1 cut(s) 411
BspT107I GGYRCC 1 cut(s) 2250
BspTNI GGTCTC 1 cut(s) 288
BsrBI CCGCTC 2 cut(s) 1305, 2598
BsrDI GCAATG 4 cut(s) 778, 1692, 1948, 2499
BsrFI RCCGGY 1 cut(s) 224
BsrGI TGTACA 1 cut(s) 993
BsrI ACTGG 6 cut(s) 284, 646, 1202, 1700, 2021, 2583
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 6 cut(s) 82, 114, 837, 1287, 2246, 2438
BssMI GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
BssNAI GTATAC 1 cut(s) 886
BssT1I CCWWGG 4 cut(s) 82, 837, 1287, 2438
Bst1107I GTATAC 1 cut(s) 886
Bst2UI CCWGG 5 cut(s) 116, 310, 1470, 1665, 2540
Bst4CI ACNGT 8 cut(s) 149, 450, 719, 1348, 1722, 1795, 1848, 2325
Bst6I CTCTTC 1 cut(s) 74
BstAUI TGTACA 1 cut(s) 993
BstBI TTCGAA 1 cut(s) 411
BstC8I GCNNGC 4 cut(s) 155, 211, 858, 2239
BstENI CCTNNNNNAGG 1 cut(s) 2671
BstF5I GGATG 7 cut(s) 124, 1083, 1608, 1811, 2128, 2215, 2528
BstFNI CGCG 1 cut(s) 49
BstH2I RGCGCY 1 cut(s) 623
BstHHI GCGC 3 cut(s) 622, 1566, 2260
BstKTI GATC 9 cut(s) 124, 357, 697, 767, 1210, 1740, 1749, 2115, 2437
BstMAI GTCTC 5 cut(s) 288, 1413, 2409, 2443, 2643
BstMBI GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
BstMCI CGRYCG 1 cut(s) 1596
BstMWI GCNNNNNNNGC 5 cut(s) 467, 628, 1223, 1595, 2063
BstNI CCWGG 5 cut(s) 116, 310, 1470, 1665, 2540
BstNSI RCATGY 4 cut(s) 497, 521, 892, 2502
BstSCI CCNGG 7 cut(s) 114, 308, 1468, 1663, 2245, 2246, 2538
BstSFI CTRYAG 4 cut(s) 155, 1623, 2058, 2202
BstSLI GKGCMC 1 cut(s) 1219
BstUI CGCG 1 cut(s) 49
BstV1I GCAGC 4 cut(s) 489, 796, 840, 2053
BstV2I GAAGAC 2 cut(s) 86, 1842
BstX2I RGATCY 3 cut(s) 764, 1207, 1737
BstYI RGATCY 3 cut(s) 764, 1207, 1737
BstZ17I GTATAC 1 cut(s) 886
BsuI GTATCC 2 cut(s) 662, 687
BsuRI GGCC 5 cut(s) 153, 390, 577, 2184, 2527
BtrI CACGTC 1 cut(s) 824
BtsCI GGATG 7 cut(s) 124, 1083, 1608, 1811, 2128, 2215, 2528
BtsI GCAGTG 1 cut(s) 74
BtsIMutI CAGTG 5 cut(s) 74, 1353, 1475, 1707, 2607
BveI ACCTGC 2 cut(s) 949, 2356
Cac8I GCNNGC 4 cut(s) 155, 211, 858, 2239
CaiI CAGNNNCTG 2 cut(s) 315, 2066
CciI TCATGA 2 cut(s) 135, 691
CfoI GCGC 3 cut(s) 622, 1566, 2260
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 1 cut(s) 1388
Cfr9I CCCGGG 1 cut(s) 2246
CseI GACGC 3 cut(s) 215, 1163, 1578
CspAI ACCGGT 1 cut(s) 224
CspCI CAANNNNNGTGG 2 cut(s) 588, 623
DpnI GATC 9 cut(s) 123, 356, 696, 766, 1209, 1739, 1748, 2114, 2436
DpnII GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
DraI TTTAAA 1 cut(s) 1761
DrdI GACNNNNNNGTC 1 cut(s) 1427
DriI GACNNNNNGTC 1 cut(s) 1405
DseDI GACNNNNNNGTC 1 cut(s) 1427
EaeI YGGCCR 1 cut(s) 388
Eam1104I CTCTTC 1 cut(s) 74
Eam1105I GACNNNNNGTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 74
Eco130I CCWWGG 4 cut(s) 82, 837, 1287, 2438
Eco147I AGGCCT 1 cut(s) 577
Eco31I GGTCTC 1 cut(s) 288
Eco47I GGWCC 1 cut(s) 1388
Eco57I CTGAAG 2 cut(s) 321, 1836
Eco88I CYCGRG 4 cut(s) 404, 1300, 2246, 2261
EcoNI CCTNNNNNAGG 1 cut(s) 2671
EcoRI GAATTC 4 cut(s) 131, 1118, 2373, 2644
EcoRII CCWGG 5 cut(s) 114, 308, 1468, 1663, 2538
EcoT14I CCWWGG 4 cut(s) 82, 837, 1287, 2438
EcoT22I ATGCAT 2 cut(s) 592, 1811
ErhI CCWWGG 4 cut(s) 82, 837, 1287, 2438
Esp3I CGTCTC 1 cut(s) 2443
FalI AAGNNNNNCTT 4 cut(s) 1106, 1138, 2031, 2063
FaqI GGGAC 4 cut(s) 482, 1255, 2227, 2649
FauI CCCGC 1 cut(s) 507
FbaI TGATCA 2 cut(s) 121, 354
FblI GTMKAC 3 cut(s) 885, 2044, 2344
Fnu4HI GCNGC 6 cut(s) 503, 810, 854, 1020, 2067, 2599
FokI GGATG 7 cut(s) 131, 1070, 1595, 1818, 2135, 2222, 2515
Fsp4HI GCNGC 6 cut(s) 503, 810, 854, 1020, 2067, 2599
FspBI CTAG 4 cut(s) 6, 104, 768, 948
GlaI GCGC 3 cut(s) 621, 1565, 2259
GluI GCNGC 6 cut(s) 503, 810, 854, 1020, 2067, 2599
GsuI CTGGAG 3 cut(s) 1686, 1727, 2004
HaeII RGCGCY 1 cut(s) 623
HaeIII GGCC 5 cut(s) 153, 390, 577, 2184, 2527
HapII CCGG 3 cut(s) 225, 543, 2247
HgaI GACGC 3 cut(s) 215, 1163, 1578
HhaI GCGC 3 cut(s) 622, 1566, 2260
Hin6I GCGC 3 cut(s) 620, 1564, 2258
HinP1I GCGC 3 cut(s) 620, 1564, 2258
HincII GTYRAC 2 cut(s) 1176, 2345
HindII GTYRAC 2 cut(s) 1176, 2345
HindIII AAGCTT 2 cut(s) 211, 1224
HinfI GANTC 8 cut(s) 440, 758, 1268, 1278, 1351, 1602, 1768, 2215
HpaII CCGG 3 cut(s) 225, 543, 2247
HphI GGTGA 3 cut(s) 239, 1741, 1836
Hpy166II GTNNAC 9 cut(s) 532, 886, 996, 1176, 1725, 1969, 2045, 2305, 2345
Hpy188I TCNGA 9 cut(s) 130, 205, 359, 1356, 1735, 1896, 2011, 2176, 2643
Hpy8I GTNNAC 9 cut(s) 532, 886, 996, 1176, 1725, 1969, 2045, 2305, 2345
Hpy99I CGWCG 1 cut(s) 1594
HpyAV CCTTC 8 cut(s) 296, 659, 1085, 1108, 1232, 1338, 1482, 2033
HpyCH4III ACNGT 8 cut(s) 149, 450, 719, 1348, 1722, 1795, 1848, 2325
HpyCH4IV ACGT 4 cut(s) 330, 823, 2452, 2662
HpyF10VI GCNNNNNNNGC 5 cut(s) 467, 628, 1223, 1595, 2063
HpySE526I ACGT 4 cut(s) 330, 823, 2452, 2662
HspAI GCGC 3 cut(s) 620, 1564, 2258
KpnI GGTACC 1 cut(s) 2254
Ksp22I TGATCA 2 cut(s) 121, 354
Kzo9I GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
LmnI GCTCC 8 cut(s) 105, 291, 425, 545, 985, 1330, 1472, 1667
Lsp1109I GCAGC 4 cut(s) 489, 796, 840, 2053
LweI GCATC 8 cut(s) 351, 599, 618, 789, 881, 1796, 1827, 2053
MaeI CTAG 4 cut(s) 6, 104, 768, 948
MaeII ACGT 4 cut(s) 330, 823, 2452, 2662
MaeIII GTNAC 3 cut(s) 163, 331, 1672
MalI GATC 9 cut(s) 123, 356, 696, 766, 1209, 1739, 1748, 2114, 2436
MbiI CCGCTC 2 cut(s) 1305, 2598
MboI GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
MboII GAAGA 7 cut(s) 61, 86, 838, 1157, 1504, 1842, 1883
MfeI CAATTG 1 cut(s) 1412
MflI RGATCY 3 cut(s) 764, 1207, 1737
MhlI GDGCHC 2 cut(s) 1219, 1477
MlsI TGGCCA 1 cut(s) 390
MluNI TGGCCA 1 cut(s) 390
MlyI GAGTC 4 cut(s) 449, 752, 1277, 2209
MmeI TCCRAC 3 cut(s) 623, 1362, 2307
Mox20I TGGCCA 1 cut(s) 390
Mph1103I ATGCAT 2 cut(s) 592, 1811
MroXI GAANNNNTTC 3 cut(s) 1118, 1546, 2157
MscI TGGCCA 1 cut(s) 390
MslI CAYNNNNRTG 2 cut(s) 2121, 2630
Msp20I TGGCCA 1 cut(s) 390
MspA1I CMGCKG 1 cut(s) 502
MspI CCGG 3 cut(s) 225, 543, 2247
MspR9I CCNGG 7 cut(s) 116, 310, 1470, 1665, 2247, 2248, 2540
MunI CAATTG 1 cut(s) 1412
Mva1269I GAATGC 3 cut(s) 463, 712, 835
MvaI CCWGG 5 cut(s) 116, 310, 1470, 1665, 2540
MvnI CGCG 1 cut(s) 49
MwoI GCNNNNNNNGC 5 cut(s) 467, 628, 1223, 1595, 2063
NciI CCSGG 2 cut(s) 2247, 2248
NdeII GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
NlaIV GGNNCC 3 cut(s) 307, 541, 2252
NmuCI GTSAC 2 cut(s) 331, 1672
NsiI ATGCAT 2 cut(s) 592, 1811
NspI RCATGY 4 cut(s) 497, 521, 892, 2502
NspV TTCGAA 1 cut(s) 411
PacI TTAATTAA 1 cut(s) 585
PaeR7I CTCGAG 1 cut(s) 1300
PagI TCATGA 2 cut(s) 135, 691
PceI AGGCCT 1 cut(s) 577
PciI ACATGT 2 cut(s) 493, 517
PctI GAATGC 3 cut(s) 463, 712, 835
PdmI GAANNNNTTC 3 cut(s) 1118, 1546, 2157
PfeI GAWTC 4 cut(s) 1278, 1351, 1602, 1768
PflMI CCANNNNNTGG 1 cut(s) 2545
PfoI TCCNGGA 1 cut(s) 1468
PinAI ACCGGT 1 cut(s) 224
PkrI GCNGC 6 cut(s) 504, 811, 855, 1021, 2068, 2600
PleI GAGTC 4 cut(s) 448, 752, 1276, 2209
PpsI GAGTC 4 cut(s) 448, 752, 1276, 2209
PscI ACATGT 2 cut(s) 493, 517
PshBI ATTAAT 1 cut(s) 585
PsiI TTATAA 1 cut(s) 2357
Psp6I CCWGG 5 cut(s) 114, 308, 1468, 1663, 2538
PspGI CCWGG 5 cut(s) 114, 308, 1468, 1663, 2538
PspN4I GGNNCC 3 cut(s) 307, 541, 2252
PspPI GGNCC 1 cut(s) 1388
PspXI VCTCGAGB 1 cut(s) 1300
PstI CTGCAG 1 cut(s) 159
PstNI CAGNNNCTG 2 cut(s) 315, 2066
PsuI RGATCY 3 cut(s) 764, 1207, 1737
RseI CAYNNNNRTG 2 cut(s) 2121, 2630
SalI GTCGAC 1 cut(s) 2343
SatI GCNGC 6 cut(s) 503, 810, 854, 1020, 2067, 2599
Sau3AI GATC 9 cut(s) 121, 354, 694, 764, 1207, 1737, 1746, 2112, 2434
Sau96I GGNCC 1 cut(s) 1388
SchI GAGTC 4 cut(s) 449, 752, 1277, 2209
ScrFI CCNGG 7 cut(s) 116, 310, 1470, 1665, 2247, 2248, 2540
SduI GDGCHC 2 cut(s) 1219, 1477
SfaNI GCATC 8 cut(s) 351, 599, 618, 789, 881, 1796, 1827, 2053
SfcI CTRYAG 4 cut(s) 155, 1623, 2058, 2202
Sfr274I CTCGAG 1 cut(s) 1300
SfuI TTCGAA 1 cut(s) 411
SgrAI CRCCGGYG 1 cut(s) 224
SinI GGWCC 1 cut(s) 1388
SlaI CTCGAG 1 cut(s) 1300
SmaI CCCGGG 1 cut(s) 2248
SmiMI CAYNNNNRTG 2 cut(s) 2121, 2630
SmlI CTYRAG 4 cut(s) 623, 1221, 1300, 1821
SmoI CTYRAG 4 cut(s) 623, 1221, 1300, 1821
SseBI AGGCCT 1 cut(s) 577
SsiI CCGC 4 cut(s) 500, 1020, 1305, 2598
SspI AATATT 2 cut(s) 350, 2156
SspMI CTAG 4 cut(s) 6, 104, 768, 948
StuI AGGCCT 1 cut(s) 577
StyD4I CCNGG 7 cut(s) 114, 308, 1468, 1663, 2245, 2246, 2538
StyI CCWWGG 4 cut(s) 82, 837, 1287, 2438
TaaI ACNGT 8 cut(s) 149, 450, 719, 1348, 1722, 1795, 1848, 2325
TaiI ACGT 4 cut(s) 333, 826, 2455, 2665
TaqI TCGA 6 cut(s) 411, 646, 684, 1301, 2344, 2584
TaqII GACCGA 1 cut(s) 1582
TatI WGTACW 5 cut(s) 740, 993, 1974, 2265, 2320
TauI GCSGC 2 cut(s) 1022, 2601
TfiI GAWTC 4 cut(s) 1278, 1351, 1602, 1768
TscAI CASTG 5 cut(s) 81, 1353, 1482, 1707, 2614
TseFI GTSAC 2 cut(s) 331, 1672
TseI GCWGC 4 cut(s) 502, 809, 853, 2066
Tsp45I GTSAC 2 cut(s) 331, 1672
TspDTI ATGAA 7 cut(s) 98, 124, 205, 680, 1865, 1895, 2166
TspGWI ACGGA 5 cut(s) 229, 454, 669, 1043, 1666
TspMI CCCGGG 1 cut(s) 2246
TspRI CASTG 5 cut(s) 81, 1353, 1482, 1707, 2614
Van91I CCANNNNNTGG 1 cut(s) 2545
VpaK11BI GGWCC 1 cut(s) 1388
VspI ATTAAT 1 cut(s) 585
XagI CCTNNNNNAGG 1 cut(s) 2671
XapI RAATTY 7 cut(s) 131, 189, 1118, 2194, 2373, 2620, 2644
XceI RCATGY 4 cut(s) 497, 521, 892, 2502
XhoI CTCGAG 1 cut(s) 1300
XmaI CCCGGG 1 cut(s) 2246
XmiI GTMKAC 3 cut(s) 885, 2044, 2344
XmnI GAANNNNTTC 3 cut(s) 1118, 1546, 2157
XspI CTAG 4 cut(s) 6, 104, 768, 948
Zsp2I ATGCAT 2 cut(s) 592, 1811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.