pycom17g18910

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
16469518 .. 16471190
1673 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g18910.1

Sequence Viewer

Length: 645 bp
ATGATCATCGTGATATGTCGCCCACCACCATCACCTGAGATCACACCAGCAAGACCTCCAGACTCACAAGTTTTCGTAAATGCAACTCCACTTCATCTGTCTACAGTGGGAGAAATTCTTGGGTTCAGATTCTGCTCCACCTCAACCATAAGGCAGATCAAAGACATGAAAAGGACCAATGACGTCACAGATATTCGAGCGATTCCTCTTTTCACTGCTCGGTGCTTTTGCTCTTATGCTCCAGGCTTCATTAGCATAGATTGCGGCCTACCAGAAGGTTCGAGCTATATCGAAAAGACAACGTTCGTTAAGTATATTTCAGACGCCAACTTCATAGACAGTGGTGAAAGTAAGTTCCTATTGCCAGTTCAAAGAGGTCGAAAGATACAACCGTACTGGTATGTGAGGAGCTTCCCTCAAAGAATCAGGAACTGCTACAAGATCAACGTTACAAGTGGCACCAAATATTTAATCCGAGCAAGTTTCTTCTATGGAAATTATGACGGCCAAGATAAATATCCAGAGTTTGAACTGCATCTCGGAGCTAATTTTTGGGGATTAGTCACGCTGGAGAATGCCACCACCGCAGATAGACATAAAGAGCTCATGTCCCTTGGCGGAATTATATACATATTTGTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

215

Amino Acids

24.39

Weight (kDa)

8.87

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 86 - 203 6.5e-39 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 186
AccB1I GGYRCC 1 cut(s) 458
AccI GTMKAC 1 cut(s) 101
AciI CCGC 3 cut(s) 264, 585, 618
AclI AACGTT 2 cut(s) 302, 447
AcoI YGGCCR 1 cut(s) 505
AcsI RAATTY 1 cut(s) 114
AcyI GRCGYC 2 cut(s) 183, 324
AfaI GTAC 1 cut(s) 395
AgsI TTSAA 2 cut(s) 371, 530
AjnI CCWGG 1 cut(s) 241
AluBI AGCT 4 cut(s) 285, 411, 545, 604
AluI AGCT 4 cut(s) 285, 411, 545, 604
Alw21I GWGCWC 1 cut(s) 606
AlwNI CAGNNNCTG 2 cut(s) 132, 432
AoxI GGCC 2 cut(s) 265, 505
ApoI RAATTY 1 cut(s) 114
AspS9I GGNCC 1 cut(s) 174
AsuHPI GGTGA 2 cut(s) 24, 356
AvaII GGWCC 1 cut(s) 174
BaeI ACNNNNGTAYC 2 cut(s) 377, 410
BanI GGYRCC 1 cut(s) 458
BanII GRGCYC 1 cut(s) 606
Bbv12I GWGCWC 1 cut(s) 606
BccI CCATC 1 cut(s) 37
BceAI ACGGC 1 cut(s) 520
BciT130I CCWGG 1 cut(s) 243
BclI TGATCA 1 cut(s) 3
BfmI CTRYAG 1 cut(s) 102
BisI GCNGC 1 cut(s) 265
BlsI GCNGC 1 cut(s) 266
Bme1390I CCNGG 1 cut(s) 243
Bme18I GGWCC 1 cut(s) 174
BmgT120I GGNCC 1 cut(s) 174
BmiI GGNNCC 1 cut(s) 460
BmrFI CCNGG 1 cut(s) 243
BmsI GCATC 1 cut(s) 544
BplI GAGNNNNNCTC 2 cut(s) 400, 432
BpmI CTGGAG 3 cut(s) 42, 225, 590
BsaBI GATNNNNATC 1 cut(s) 516
BsaHI GRCGYC 2 cut(s) 183, 324
BsaJI CCNNGG 1 cut(s) 613
Bse1I ACTGG 2 cut(s) 365, 401
Bse8I GATNNNNATC 1 cut(s) 516
BseBI CCWGG 1 cut(s) 243
BseDI CCNNGG 1 cut(s) 613
BseJI GATNNNNATC 1 cut(s) 516
BseMII CTCAG 1 cut(s) 27
BseNI ACTGG 2 cut(s) 365, 401
BseRI GAGGAG 1 cut(s) 421
BshFI GGCC 2 cut(s) 267, 507
BshNI GGYRCC 1 cut(s) 458
BsiHKAI GWGCWC 1 cut(s) 606
BslFI GGGAC 1 cut(s) 595
BsmFI GGGAC 1 cut(s) 595
BsmI GAATGC 1 cut(s) 580
BsnI GGCC 2 cut(s) 267, 507
Bsp1286I GDGCHC 1 cut(s) 606
Bsp143I GATC 4 cut(s) 3, 39, 156, 441
BspACI CCGC 3 cut(s) 264, 585, 618
BspANI GGCC 2 cut(s) 267, 507
BspCNI CTCAG 1 cut(s) 28
BspLI GGNNCC 1 cut(s) 460
BspT107I GGYRCC 1 cut(s) 458
BsrI ACTGG 2 cut(s) 365, 401
BssECI CCNNGG 1 cut(s) 613
BssMI GATC 4 cut(s) 3, 39, 156, 441
BssNI GRCGYC 2 cut(s) 183, 324
BssT1I CCWWGG 1 cut(s) 613
Bst2UI CCWGG 1 cut(s) 243
Bst4CI ACNGT 3 cut(s) 106, 341, 393
BstACI GRCGYC 2 cut(s) 183, 324
BstAPI GCANNNNNTGC 1 cut(s) 261
BstDEI CTNAG 1 cut(s) 36
BstKTI GATC 4 cut(s) 6, 42, 159, 444
BstMBI GATC 4 cut(s) 3, 39, 156, 441
BstMWI GCNNNNNNNGC 3 cut(s) 252, 261, 584
BstNI CCWGG 1 cut(s) 243
BstSCI CCNGG 1 cut(s) 241
BstSFI CTRYAG 1 cut(s) 102
BsuRI GGCC 2 cut(s) 267, 507
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 3 cut(s) 111, 213, 346
CaiI CAGNNNCTG 2 cut(s) 132, 432
Cfr13I GGNCC 1 cut(s) 174
CseI GACGC 1 cut(s) 332
Csp6I GTAC 1 cut(s) 394
CviAII CATG 2 cut(s) 166, 607
CviJI RGCY 7 cut(s) 246, 267, 285, 411, 507, 545, 604
CviKI_1 RGCY 7 cut(s) 246, 267, 285, 411, 507, 545, 604
CviQI GTAC 1 cut(s) 394
DdeI CTNAG 1 cut(s) 36
DpnI GATC 4 cut(s) 5, 41, 158, 443
DpnII GATC 4 cut(s) 3, 39, 156, 441
EaeI YGGCCR 1 cut(s) 505
EciI GGCGGA 1 cut(s) 633
Ecl136II GAGCTC 1 cut(s) 604
Eco130I CCWWGG 1 cut(s) 613
Eco24I GRGCYC 1 cut(s) 606
Eco47I GGWCC 1 cut(s) 174
Eco53kI GAGCTC 1 cut(s) 604
EcoICRI GAGCTC 1 cut(s) 604
EcoRII CCWGG 1 cut(s) 241
EcoT14I CCWWGG 1 cut(s) 613
EcoT38I GRGCYC 1 cut(s) 606
ErhI CCWWGG 1 cut(s) 613
FaeI CATG 2 cut(s) 169, 610
FaqI GGGAC 1 cut(s) 595
FatI CATG 2 cut(s) 165, 606
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 101
Fnu4HI GCNGC 1 cut(s) 265
FriOI GRGCYC 1 cut(s) 606
Fsp4HI GCNGC 1 cut(s) 265
GluI GCNGC 1 cut(s) 265
GsuI CTGGAG 3 cut(s) 42, 225, 590
HaeIII GGCC 2 cut(s) 267, 507
HgaI GACGC 1 cut(s) 332
Hin1I GRCGYC 2 cut(s) 183, 324
Hin1II CATG 2 cut(s) 169, 610
HinfI GANTC 4 cut(s) 62, 129, 202, 423
HphI GGTGA 2 cut(s) 24, 356
Hpy166II GTNNAC 1 cut(s) 102
Hpy188I TCNGA 4 cut(s) 128, 322, 476, 542
Hpy188III TCNNGA 4 cut(s) 10, 59, 427, 521
Hpy8I GTNNAC 1 cut(s) 102
HpyAV CCTTC 1 cut(s) 269
HpyCH4III ACNGT 3 cut(s) 106, 341, 393
HpyCH4IV ACGT 3 cut(s) 183, 302, 447
HpyCH4V TGCA 2 cut(s) 83, 535
HpyF10VI GCNNNNNNNGC 3 cut(s) 252, 261, 584
HpyF3I CTNAG 1 cut(s) 36
HpySE526I ACGT 3 cut(s) 183, 302, 447
Hsp92I GRCGYC 2 cut(s) 183, 324
Hsp92II CATG 2 cut(s) 169, 610
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 4 cut(s) 3, 39, 156, 441
LmnI GCTCC 4 cut(s) 140, 244, 408, 542
LweI GCATC 1 cut(s) 544
MaeII ACGT 3 cut(s) 183, 302, 447
MaeIII GTNAC 3 cut(s) 184, 448, 562
MalI GATC 4 cut(s) 5, 41, 158, 443
MboI GATC 4 cut(s) 3, 39, 156, 441
MboII GAAGA 1 cut(s) 478
MhlI GDGCHC 1 cut(s) 606
MluCI AATT 4 cut(s) 114, 496, 547, 621
MlyI GAGTC 1 cut(s) 56
MnlI CCTC 6 cut(s) 66, 151, 216, 368, 399, 426
MseI TTAA 2 cut(s) 309, 470
MspR9I CCNGG 1 cut(s) 243
Mva1269I GAATGC 1 cut(s) 580
MvaI CCWGG 1 cut(s) 243
MwoI GCNNNNNNNGC 3 cut(s) 252, 261, 584
NdeII GATC 4 cut(s) 3, 39, 156, 441
NlaIII CATG 2 cut(s) 169, 610
NlaIV GGNNCC 1 cut(s) 460
NmuCI GTSAC 2 cut(s) 184, 562
PctI GAATGC 1 cut(s) 580
PfeI GAWTC 3 cut(s) 129, 202, 423
PkrI GCNGC 1 cut(s) 266
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
Psp124BI GAGCTC 1 cut(s) 606
Psp1406I AACGTT 2 cut(s) 302, 447
Psp6I CCWGG 1 cut(s) 241
PspGI CCWGG 1 cut(s) 241
PspN4I GGNNCC 1 cut(s) 460
PspPI GGNCC 1 cut(s) 174
PstNI CAGNNNCTG 2 cut(s) 132, 432
RsaI GTAC 1 cut(s) 395
RsaNI GTAC 1 cut(s) 394
SacI GAGCTC 1 cut(s) 606
SaqAI TTAA 2 cut(s) 309, 470
SatI GCNGC 1 cut(s) 265
Sau3AI GATC 4 cut(s) 3, 39, 156, 441
Sau96I GGNCC 1 cut(s) 174
SchI GAGTC 1 cut(s) 56
ScrFI CCNGG 1 cut(s) 243
SduI GDGCHC 1 cut(s) 606
SfaNI GCATC 1 cut(s) 544
SfcI CTRYAG 1 cut(s) 102
SinI GGWCC 1 cut(s) 174
Sse9I AATT 4 cut(s) 114, 496, 547, 621
SsiI CCGC 3 cut(s) 264, 585, 618
SspI AATATT 1 cut(s) 467
SstI GAGCTC 1 cut(s) 606
StyD4I CCNGG 1 cut(s) 241
StyI CCWWGG 1 cut(s) 613
TaaI ACNGT 3 cut(s) 106, 341, 393
TaiI ACGT 3 cut(s) 186, 305, 450
TaqI TCGA 4 cut(s) 196, 281, 291, 379
TasI AATT 4 cut(s) 114, 496, 547, 621
TauI GCSGC 1 cut(s) 267
TfiI GAWTC 3 cut(s) 129, 202, 423
Tru1I TTAA 2 cut(s) 309, 470
Tru9I TTAA 2 cut(s) 309, 470
TscAI CASTG 3 cut(s) 111, 220, 346
TseFI GTSAC 2 cut(s) 184, 562
Tsp45I GTSAC 2 cut(s) 184, 562
TspDTI ATGAA 4 cut(s) 83, 182, 238, 322
TspRI CASTG 3 cut(s) 111, 220, 346
VpaK11BI GGWCC 1 cut(s) 174
XapI RAATTY 1 cut(s) 114
XmiI GTMKAC 1 cut(s) 101
ZraI GACGTC 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.