Rh2BG428600

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000083
Physical Location & Seq
Reverse (-)
60467949 .. 60499901
31953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG428600.1

Sequence Viewer

Length: 1875 bp
ATGGGCTGCGTGTGGGCCATGGGTCTTTGGGTTATGAGAGTCATACCCATCCCTAATGGGTGTAGTGAGAAGTTCTGTGGTGCTCCAATTACCGAGGCCGGGAAGAGGAAACTGAAGACACTCCGACTCCGAAGAGGAGCCGCCATGGCCTTGAGTTGGTCCCGGTGGAGGTGCGGGTCAAGATGGATGCTAGGGAGAAGAAGGGCTTTACTGCTCGGTGGTTTTGCTCTTAATAATCTTAAGCTCCTAGTTCATGCCCAGGATCAATCAGGCTTTGGGGTTCCATTTATATCAGGGATAGAGCTGAGGCCTTTATCTAATGAATCGTATGAAGCACAAGTGGGATCCTTGGCACTTGAATGGCGGTATGACACAGGTCTAATGGCTGATAAGAGGGGATACAGGTATCCAGAGGATGTTCATGACCGCTTCTGGTATATCTACGAAAGCCTCAACAATTGGGAACAATTAAATACTTCATCCACCATCGACCCTGACAATCAGAACAGCTTTGAATTACCATCTGTTGTTATGAGTACTGCCATCAAGCCAAAAAATGTAAATGAGTCCTTGAATTTTTCTTGGCAGCCTACTGATCAAAATGCAGAATATTATATTTTCATGCATTTCGCAGAAGTTGAAAAGCTCCAACCAAACCAGACTAGATTTCAGTACATTACCAAAAATGAAAAGATCTATAATGACCTATTTTCTTTGGAGTACATGTACCCAGCTACTAGTTACAGTAGTAAAGCAATGAGTGGAAGACAAGACATTTCAATCTTCAAGGCTGAGAATTCCACCCTTCCACCCATCCTCAATGCTTTTGAGATTTATAAGGTGAAAAAATTCGTAGAACTAGATACAAGTCAAGGAGACGTTGTTGCAATCACACAACTCAAGTCATCTTATAAAATCAGAAGAAACTGGCAAGGAGATCCTTGTGCCCCTCAAGTTTACTCATGGCAAGGTCTAAACTGTAGCTATCTGAGAAGTGATCAGGCCCTAAGAATCGTATCCTTGAACTTGTCCTCAAGTGGACTAACAGGGGAGATTGATCTTTCTATGTCCAATCTCACAATGCTGCAGACTTTAAACTTGGAGAACAACAATCTGAAAGGCTTGGTTCCAGTTGGACTGATTGAAAGAATGAATGATGGTTCACTAACATTAAGGTATCCAAAGGATATTTATGATCGCTTTTGGGATCCCTATGAGGATGTTGACAATGAGTGGTTAACATTGAATACTTCATCCACAGTCGACTTTGACAAACACAACAGATACCAACCAGCATCAATTGTCATGAGCACAGCTGCCACATCACGAAATGCGAATGTTTCCTTGAATTTATGGTGGGATCCTCCTATTGATGCAAACGATACAGAATATTATGTTTACATGCACTTTGCAGAAATTGAAAAGCTCCAATCAAATGAGTCCAGAATGCAGTACATTACTAACCATGGAGAGCTCTTCCAGGAGTCATTTGCTGCTAGTTACTTGTATACCACAACAATTTACAGCACTAAAGGTTTGAGAGGAGGGCAGAACTTTTCAATCATCAAGGATGACAACTCTACCCTTCCACCCAGTATCAATGGACTTGAGGTCTACACACTGAAAGAATTCCTAGAATTAGAAACAAACCAAGAGGATGTTGACGCAATCACAAACATTAAGTCAACCTATACCATTGAGAAGAATTGGCAAGGAGATCCATGTTCCCCCAAGAACTACTTATGGGAAGGTCTAAAATGTAGCTATCCTATAAATGAGTCCCCAAGAATCATATCATTGGACTTGTCCTCGAGTGAATTAACTGGGGAGACAGCTCTTTCTTTATCCAATCTATCAATGATACAGTCTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase_Tyr

Protein Analysis

624

Amino Acids

71.32

Weight (kDa)

5.22

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 91 - 281 7.5e-50 Malectin-like domain
Malectin_like PF12819 382 - 540 2.2e-37 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 837, 912
AccI GTMKAC 3 cut(s) 1263, 1508, 1614
AciI CCGC 4 cut(s) 141, 174, 364, 427
AclWI GGATC 9 cut(s) 270, 339, 352, 932, 1202, 1215, 1355, 1368, 1712
AcsI RAATTY 5 cut(s) 574, 796, 848, 1348, 1628
AcuI CTGAAG 1 cut(s) 134
AfaI GTAC 5 cut(s) 538, 674, 722, 728, 1454
AfiI CCNNNNNNNGG 4 cut(s) 99, 105, 156, 168
AflII CTTAAG 1 cut(s) 239
AflIII ACRYGT 1 cut(s) 723
AhdI GACNNNNNGTC 1 cut(s) 1610
AhlI ACTAGT 1 cut(s) 737
AjnI CCWGG 2 cut(s) 258, 1479
Alw21I GWGCWC 3 cut(s) 85, 1313, 1476
Alw26I GTCTC 2 cut(s) 870, 1823
AlwI GGATC 9 cut(s) 270, 339, 352, 932, 1202, 1215, 1355, 1368, 1712
Ama87I CYCGRG 1 cut(s) 1810
AoxI GGCC 5 cut(s) 15, 96, 147, 308, 1002
ApeKI GCWGC 5 cut(s) 6, 586, 1084, 1316, 1493
ApoI RAATTY 5 cut(s) 574, 796, 848, 1348, 1628
ArsI GACNNNNNNTTYG 2 cut(s) 1667, 1699
Asp700I GAANNNNTTC 2 cut(s) 848, 1628
AspS9I GGNCC 3 cut(s) 15, 159, 1003
AsuC2I CCSGG 2 cut(s) 100, 163
AsuHPI GGTGA 1 cut(s) 853
AvaI CYCGRG 1 cut(s) 1810
AvaII GGWCC 1 cut(s) 159
BaeGI GKGCMC 1 cut(s) 949
BamHI GGATCC 3 cut(s) 344, 1207, 1360
BanII GRGCYC 1 cut(s) 1476
BbsI GAAGAC 2 cut(s) 122, 772
Bbv12I GWGCWC 3 cut(s) 85, 1313, 1476
BbvCI CCTCAGC 1 cut(s) 305
BbvI GCAGC 4 cut(s) 598, 1071, 1303, 1480
BccI CCATC 7 cut(s) 56, 177, 494, 529, 551, 821, 1151
BciT130I CCWGG 2 cut(s) 260, 1481
BciVI GTATCC 4 cut(s) 392, 417, 1027, 1188
BclI TGATCA 2 cut(s) 595, 997
BcnI CCSGG 2 cut(s) 100, 163
BcoDI GTCTC 2 cut(s) 870, 1823
BcuI ACTAGT 1 cut(s) 737
BfaI CTAG 7 cut(s) 191, 248, 663, 738, 860, 1497, 1634
BfmI CTRYAG 2 cut(s) 979, 1085
BfrI CTTAAG 1 cut(s) 239
BfuI GTATCC 4 cut(s) 392, 417, 1027, 1188
BglI GCCNNNNNGGC 1 cut(s) 146
BglII AGATCT 1 cut(s) 693
BisI GCNGC 6 cut(s) 7, 141, 587, 1085, 1317, 1494
BlsI GCNGC 6 cut(s) 8, 142, 588, 1086, 1318, 1495
BmcAI AGTACT 1 cut(s) 538
Bme1390I CCNGG 4 cut(s) 100, 163, 260, 1481
Bme18I GGWCC 1 cut(s) 159
BmeRI GACNNNNNGTC 1 cut(s) 1610
BmeT110I CYCGRG 1 cut(s) 1810
BmgT120I GGNCC 3 cut(s) 15, 159, 1003
BmiI GGNNCC 7 cut(s) 139, 161, 282, 346, 1128, 1209, 1362
BmrFI CCNGG 4 cut(s) 100, 163, 260, 1481
BmrI ACTGGG 2 cut(s) 1587, 1833
BmsI GCATC 3 cut(s) 177, 1304, 1363
BmuI ACTGGG 2 cut(s) 1587, 1833
BoxI GACNNNNGTC 1 cut(s) 375
BpiI GAAGAC 2 cut(s) 122, 772
Bpu10I CCTNAGC 1 cut(s) 305
BpuEI CTTGAG 5 cut(s) 172, 884, 936, 1018, 1628
BpuMI CCSGG 2 cut(s) 100, 163
BsaJI CCNNGG 6 cut(s) 18, 93, 144, 258, 348, 1465
BsaXI ACNNNNNCTCC 6 cut(s) 111, 141, 710, 740, 867, 897
Bsc4I CCNNNNNNNGG 4 cut(s) 99, 105, 156, 168
Bse1I ACTGG 4 cut(s) 932, 1130, 1593, 1828
Bse3DI GCAATG 1 cut(s) 762
BseBI CCWGG 2 cut(s) 260, 1481
BseDI CCNNGG 6 cut(s) 18, 93, 144, 258, 348, 1465
BseGI GGATG 9 cut(s) 48, 192, 421, 479, 813, 1225, 1253, 1576, 1663
BseLI CCNNNNNNNGG 4 cut(s) 99, 105, 156, 168
BseMI GCAATG 1 cut(s) 762
BseMII CTCAG 3 cut(s) 296, 783, 980
BseNI ACTGG 4 cut(s) 932, 1130, 1593, 1828
BseRI GAGGAG 2 cut(s) 150, 1557
BseSI GKGCMC 1 cut(s) 949
BseXI GCAGC 4 cut(s) 598, 1071, 1303, 1480
BseYI CCCAGC 1 cut(s) 730
BshFI GGCC 5 cut(s) 17, 98, 149, 310, 1004
BsiHKAI GWGCWC 3 cut(s) 85, 1313, 1476
BsiHKCI CYCGRG 1 cut(s) 1810
BsiSI CCGG 2 cut(s) 99, 163
BslFI GGGAC 2 cut(s) 145, 1765
BslI CCNNNNNNNGG 4 cut(s) 99, 105, 156, 168
BsmAI GTCTC 2 cut(s) 870, 1823
BsmBI CGTCTC 1 cut(s) 870
BsmFI GGGAC 2 cut(s) 145, 1765
BsmI GAATGC 1 cut(s) 1452
BsnI GGCC 5 cut(s) 17, 98, 149, 310, 1004
BsoBI CYCGRG 1 cut(s) 1810
Bsp1286I GDGCHC 4 cut(s) 85, 949, 1313, 1476
Bsp19I CCATGG 3 cut(s) 18, 144, 1465
BspACI CCGC 4 cut(s) 141, 174, 364, 427
BspANI GGCC 5 cut(s) 17, 98, 149, 310, 1004
BspCNI CTCAG 3 cut(s) 297, 784, 981
BspHI TCATGA 2 cut(s) 421, 1305
BspLI GGNNCC 7 cut(s) 139, 161, 282, 346, 1128, 1209, 1362
BspMAI CTGCAG 1 cut(s) 1089
BspPI GGATC 9 cut(s) 270, 339, 352, 932, 1202, 1215, 1355, 1368, 1712
BspQI GCTCTTC 1 cut(s) 1481
BspTI CTTAAG 1 cut(s) 239
BsrDI GCAATG 1 cut(s) 762
BsrI ACTGG 4 cut(s) 932, 1130, 1593, 1828
BssECI CCNNGG 6 cut(s) 18, 93, 144, 258, 348, 1465
BssNAI GTATAC 1 cut(s) 1509
BssT1I CCWWGG 4 cut(s) 18, 144, 348, 1465
Bst1107I GTATAC 1 cut(s) 1509
Bst2UI CCWGG 2 cut(s) 260, 1481
Bst4CI ACNGT 4 cut(s) 746, 980, 1261, 1866
Bst6I CTCTTC 3 cut(s) 98, 127, 1481
BstAFI CTTAAG 1 cut(s) 239
BstDEI CTNAG 4 cut(s) 305, 792, 989, 1007
BstDSI CCRYGG 3 cut(s) 18, 144, 1465
BstF5I GGATG 9 cut(s) 48, 192, 421, 479, 813, 1225, 1253, 1576, 1663
BstMAI GTCTC 2 cut(s) 870, 1823
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstNI CCWGG 2 cut(s) 260, 1481
BstNSI RCATGY 2 cut(s) 727, 1405
BstPAI GACNNNNGTC 1 cut(s) 375
BstSCI CCNGG 4 cut(s) 98, 161, 258, 1479
BstSFI CTRYAG 2 cut(s) 979, 1085
BstSLI GKGCMC 1 cut(s) 949
BstV1I GCAGC 4 cut(s) 598, 1071, 1303, 1480
BstV2I GAAGAC 2 cut(s) 122, 772
BstX2I RGATCY 6 cut(s) 344, 693, 937, 1207, 1360, 1717
BstYI RGATCY 6 cut(s) 344, 693, 937, 1207, 1360, 1717
BstZ17I GTATAC 1 cut(s) 1509
BsuI GTATCC 4 cut(s) 392, 417, 1027, 1188
BsuRI GGCC 5 cut(s) 17, 98, 149, 310, 1004
BtgI CCRYGG 3 cut(s) 18, 144, 1465
BtsCI GGATG 9 cut(s) 48, 192, 421, 479, 813, 1225, 1253, 1576, 1663
BtsIMutI CAGTG 1 cut(s) 1619
CciI TCATGA 2 cut(s) 421, 1305
Cfr13I GGNCC 3 cut(s) 15, 159, 1003
CseI GACGC 1 cut(s) 1673
Csp6I GTAC 5 cut(s) 537, 673, 721, 727, 1453
CviQI GTAC 5 cut(s) 537, 673, 721, 727, 1453
DdeI CTNAG 4 cut(s) 305, 792, 989, 1007
DraI TTTAAA 1 cut(s) 1095
DriI GACNNNNNGTC 1 cut(s) 1610
Eam1104I CTCTTC 3 cut(s) 98, 127, 1481
Eam1105I GACNNNNNGTC 1 cut(s) 1610
EarI CTCTTC 3 cut(s) 98, 127, 1481
Ecl136II GAGCTC 1 cut(s) 1474
Eco130I CCWWGG 4 cut(s) 18, 144, 348, 1465
Eco147I AGGCCT 1 cut(s) 310
Eco24I GRGCYC 1 cut(s) 1476
Eco47I GGWCC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 1474
Eco57I CTGAAG 1 cut(s) 134
Eco88I CYCGRG 1 cut(s) 1810
EcoICRI GAGCTC 1 cut(s) 1474
EcoO109I RGGNCCY 1 cut(s) 1003
EcoRI GAATTC 2 cut(s) 796, 1628
EcoRII CCWGG 2 cut(s) 258, 1479
EcoT14I CCWWGG 4 cut(s) 18, 144, 348, 1465
EcoT22I ATGCAT 1 cut(s) 627
EcoT38I GRGCYC 1 cut(s) 1476
ErhI CCWWGG 4 cut(s) 18, 144, 348, 1465
Esp3I CGTCTC 1 cut(s) 870
FalI AAGNNNNNCTT 4 cut(s) 190, 222, 1724, 1756
FaqI GGGAC 2 cut(s) 145, 1765
FauI CCCGC 1 cut(s) 167
FbaI TGATCA 2 cut(s) 595, 997
FblI GTMKAC 3 cut(s) 1263, 1508, 1614
Fnu4HI GCNGC 6 cut(s) 7, 141, 587, 1085, 1317, 1494
FokI GGATG 9 cut(s) 35, 199, 428, 466, 800, 1232, 1240, 1583, 1670
FriOI GRGCYC 1 cut(s) 1476
Fsp4HI GCNGC 6 cut(s) 7, 141, 587, 1085, 1317, 1494
FspBI CTAG 7 cut(s) 191, 248, 663, 738, 860, 1497, 1634
GluI GCNGC 6 cut(s) 7, 141, 587, 1085, 1317, 1494
GsaI CCCAGC 1 cut(s) 734
HaeIII GGCC 5 cut(s) 17, 98, 149, 310, 1004
HapII CCGG 2 cut(s) 99, 163
HgaI GACGC 1 cut(s) 1673
HincII GTYRAC 5 cut(s) 1225, 1239, 1264, 1663, 1686
HindII GTYRAC 5 cut(s) 1225, 1239, 1264, 1663, 1686
HinfI GANTC 9 cut(s) 39, 126, 323, 566, 1011, 1439, 1484, 1778, 1788
HpaI GTTAAC 1 cut(s) 1239
HpaII CCGG 2 cut(s) 99, 163
HphI GGTGA 1 cut(s) 853
Hpy188I TCNGA 6 cut(s) 125, 131, 504, 920, 990, 1116
Hpy188III TCNNGA 6 cut(s) 180, 410, 422, 1306, 1326, 1443
HpyAV CCTTC 4 cut(s) 195, 815, 1595, 1742
HpyCH4III ACNGT 4 cut(s) 746, 980, 1261, 1866
HpyCH4IV ACGT 1 cut(s) 879
HpyCH4V TGCA 8 cut(s) 605, 625, 887, 1087, 1376, 1405, 1412, 1450
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
HpyF3I CTNAG 4 cut(s) 305, 792, 989, 1007
HpySE526I ACGT 1 cut(s) 879
Ksp22I TGATCA 2 cut(s) 595, 997
KspAI GTTAAC 1 cut(s) 1239
LguI GCTCTTC 1 cut(s) 1481
LmnI GCTCC 5 cut(s) 88, 137, 249, 651, 1431
Lsp1109I GCAGC 4 cut(s) 598, 1071, 1303, 1480
LweI GCATC 3 cut(s) 177, 1304, 1363
MaeI CTAG 7 cut(s) 191, 248, 663, 738, 860, 1497, 1634
MaeII ACGT 1 cut(s) 879
MaeIII GTNAC 2 cut(s) 740, 1499
MboII GAAGA 9 cut(s) 115, 127, 144, 210, 775, 777, 933, 1468, 1714
MfeI CAATTG 2 cut(s) 457, 1299
MflI RGATCY 6 cut(s) 344, 693, 937, 1207, 1360, 1717
MhlI GDGCHC 4 cut(s) 85, 949, 1313, 1476
MlyI GAGTC 6 cut(s) 48, 120, 575, 1448, 1493, 1787
MmeI TCCRAC 3 cut(s) 148, 673, 1114
Mph1103I ATGCAT 1 cut(s) 627
MroXI GAANNNNTTC 2 cut(s) 848, 1628
MseI TTAA 8 cut(s) 231, 240, 470, 1094, 1172, 1238, 1680, 1820
MslI CAYNNNNRTG 1 cut(s) 358
MspA1I CMGCKG 1 cut(s) 1316
MspCI CTTAAG 1 cut(s) 239
MspI CCGG 2 cut(s) 99, 163
MspR9I CCNGG 4 cut(s) 100, 163, 260, 1481
MunI CAATTG 2 cut(s) 457, 1299
Mva1269I GAATGC 1 cut(s) 1452
MvaI CCWGG 2 cut(s) 260, 1481
MwoI GCNNNNNNNGC 1 cut(s) 146
NciI CCSGG 2 cut(s) 100, 163
NcoI CCATGG 3 cut(s) 18, 144, 1465
NlaIV GGNNCC 7 cut(s) 139, 161, 282, 346, 1128, 1209, 1362
NsiI ATGCAT 1 cut(s) 627
NspI RCATGY 2 cut(s) 727, 1405
PaeR7I CTCGAG 1 cut(s) 1810
PagI TCATGA 2 cut(s) 421, 1305
PceI AGGCCT 1 cut(s) 310
PciI ACATGT 1 cut(s) 723
PciSI GCTCTTC 1 cut(s) 1481
PctI GAATGC 1 cut(s) 1452
PdmI GAANNNNTTC 2 cut(s) 848, 1628
PfeI GAWTC 3 cut(s) 323, 1011, 1788
PfoI TCCNGGA 1 cut(s) 1479
PkrI GCNGC 6 cut(s) 8, 142, 588, 1086, 1318, 1495
PleI GAGTC 6 cut(s) 47, 120, 574, 1447, 1492, 1786
PpsI GAGTC 6 cut(s) 47, 120, 574, 1447, 1492, 1786
PscI ACATGT 1 cut(s) 723
PshAI GACNNNNGTC 1 cut(s) 375
PsiI TTATAA 2 cut(s) 837, 912
Psp124BI GAGCTC 1 cut(s) 1476
Psp6I CCWGG 2 cut(s) 258, 1479
PspFI CCCAGC 1 cut(s) 730
PspGI CCWGG 2 cut(s) 258, 1479
PspN4I GGNNCC 7 cut(s) 139, 161, 282, 346, 1128, 1209, 1362
PspPI GGNCC 3 cut(s) 15, 159, 1003
PspXI VCTCGAGB 1 cut(s) 1810
PstI CTGCAG 1 cut(s) 1089
PsuI RGATCY 6 cut(s) 344, 693, 937, 1207, 1360, 1717
PvuII CAGCTG 1 cut(s) 1316
RsaI GTAC 5 cut(s) 538, 674, 722, 728, 1454
RsaNI GTAC 5 cut(s) 537, 673, 721, 727, 1453
RseI CAYNNNNRTG 1 cut(s) 358
SacI GAGCTC 1 cut(s) 1476
SalI GTCGAC 1 cut(s) 1262
SapI GCTCTTC 1 cut(s) 1481
SaqAI TTAA 8 cut(s) 231, 240, 470, 1094, 1172, 1238, 1680, 1820
SatI GCNGC 6 cut(s) 7, 141, 587, 1085, 1317, 1494
Sau96I GGNCC 3 cut(s) 15, 159, 1003
ScaI AGTACT 1 cut(s) 538
SchI GAGTC 6 cut(s) 48, 120, 575, 1448, 1493, 1787
ScrFI CCNGG 4 cut(s) 100, 163, 260, 1481
SduI GDGCHC 4 cut(s) 85, 949, 1313, 1476
SfaNI GCATC 3 cut(s) 177, 1304, 1363
SfcI CTRYAG 2 cut(s) 979, 1085
Sfr274I CTCGAG 1 cut(s) 1810
SinI GGWCC 1 cut(s) 159
SlaI CTCGAG 1 cut(s) 1810
SmiMI CAYNNNNRTG 1 cut(s) 358
SmlI CTYRAG 7 cut(s) 151, 239, 899, 951, 1033, 1607, 1810
SmoI CTYRAG 7 cut(s) 151, 239, 899, 951, 1033, 1607, 1810
SpeI ACTAGT 1 cut(s) 737
SseBI AGGCCT 1 cut(s) 310
SsiI CCGC 4 cut(s) 141, 174, 364, 427
SspI AATATT 2 cut(s) 611, 1391
SspMI CTAG 7 cut(s) 191, 248, 663, 738, 860, 1497, 1634
SstI GAGCTC 1 cut(s) 1476
StuI AGGCCT 1 cut(s) 310
StyD4I CCNGG 4 cut(s) 98, 161, 258, 1479
StyI CCWWGG 4 cut(s) 18, 144, 348, 1465
TaaI ACNGT 4 cut(s) 746, 980, 1261, 1866
TaiI ACGT 1 cut(s) 882
TaqI TCGA 3 cut(s) 489, 1263, 1811
TatI WGTACW 4 cut(s) 536, 672, 720, 1452
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 3 cut(s) 323, 1011, 1788
Tru1I TTAA 8 cut(s) 231, 240, 470, 1094, 1172, 1238, 1680, 1820
Tru9I TTAA 8 cut(s) 231, 240, 470, 1094, 1172, 1238, 1680, 1820
TscAI CASTG 1 cut(s) 1626
TseI GCWGC 5 cut(s) 6, 586, 1084, 1316, 1493
TspDTI ATGAA 9 cut(s) 242, 336, 345, 410, 468, 610, 702, 1166, 1242
TspRI CASTG 1 cut(s) 1626
Vha464I CTTAAG 1 cut(s) 239
VpaK11BI GGWCC 1 cut(s) 159
XapI RAATTY 5 cut(s) 574, 796, 848, 1348, 1628
XceI RCATGY 2 cut(s) 727, 1405
XhoI CTCGAG 1 cut(s) 1810
XmiI GTMKAC 3 cut(s) 1263, 1508, 1614
XmnI GAANNNNTTC 2 cut(s) 848, 1628
XspI CTAG 7 cut(s) 191, 248, 663, 738, 860, 1497, 1634
ZrmI AGTACT 1 cut(s) 538
Zsp2I ATGCAT 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.