AT1G51800

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000083
Physical Location & Seq
Forward (+)
19214072 .. 19218053
3982 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G51800.1

Sequence Viewer

Length: 2685 bp
ATGGCGTTTTCTTCTTGTTTTCTCTTAGTTCTTCTGCAAATCTTCTCAGCTTTACTTCTTTGTCTTGCTCAAGATCAGTCAGGATTCATCAGTTTGGATTGCGGTTCGCCTAGAGAAACTAGCTTTCGTGAGAAAACAACAAACATTACTTACATTTCCGATGCGAATTTCATCAATACCGGTGTTGGTGGAAGCATCAAACAAGGATACCGGACTCAGTTTCAGCAACAAACATGGAACCTACGGAGTTTTCCACAAGGCATAAGAAACTGCTATACCTTAAACCTAACCATAGGCGACGAATATCTAATCAGAGCCAATTTCCTTCACGGCGGTTATGACGACAAACCCTCAACGCAATTCGAGCTCTACCTCGGACCTAATCTTTGGTCTACAGTTACAACCACGAACGAGACCGAAGCATCAATCTTTGAGATGATTCATATCTTGACCACTGATCGTTTACAAATCTGTCTGGTCAAGACAGGAAACGCAACGCCTTTTATCTCCGCTTTAGAGCTTCGTAAACTCATGAACACAACTTACTTGACTCGACAAGGTTCCTTGCAGACCTTCATCAGAGCAGACGTTGGCGCGACTGTTAACCAAGGCTACAGGTACGGAATCGATGTGTTTGATCGTGTCTGGACTCCGTATAATTTCGGAAACTGGTCACAGATTAGTACCAATCAGTCAGTGAATATAAACAATGACTATCAACCACCAGAGATTGCTATGGTCACAGCCTCTGTTCCAACAGACCCGGACGCAGCTATGAACATTTCGCTAGTCGGGGTGGAACGTACTGTGCAGTTCTACGTTTTTATGCATTTTGCAGAGATTCAAGAGCTCAAATCCAATGATACAAGAGAGTTCAACATCATGTACAATAACAAGCATATCTATGGACCTTTTAGACCACTTAATTTCACCACGTCTTCCGTATTTACACCTACCGAAGTTGTCGCCGATGCAAATGGGCAGTACATATTTTCGCTTCAAAGAACAGGAAATTCGACTTTACCTCCTCTGCTCAACGCTATGGAGATTTATTCGGTTAACTTGTTGCCGCAACAGGAAACTGATAGAAAAGAAGTTGATGCAATGATGAACATCAAGTCGGCTTACGGCGTGAACAAGATTGACTGGGAAGGAGATCCTTGCGTGCCGCTGGATTACAAGTGGTCTGGTGTTAATTGCACTTATGTTGACAATGAGACCCCAAAGATCATTTCTTTGGATCTGTCTACAAGTGGCTTGACCGGAGAGATCTTAGAATTTATATCAGACCTTACCAGTTTAGAAGTTCTTGACTTGTCTAACAATTCTTTAACTGGTTCAGTCCCAGAGTTTCTAGCTAATATGGAAACCTTAAAACTCATAAATCTATCTGGAAATGAGCTAAATGGCTCTATCCCTGCAACTCTCCTTGATAAAGAACGACGAGGATCTATTACGTTAAGTATCGAAGGAAATACCGGGCTTTGTTCATCTACATCATGCGCTACCACGAAAAAGAAGAAGAAAAACACTGTTATTGCACCTGTTGCAGCATCACTTGTTTCAGTATTCCTCATTGGAGCTGGAATCGTTACTTTCCTTATCCTCAAGAGGAAGAAGAGAACCAAGCTTGGTTTGAATCCTAATTCAGGAACTGGTACAACACCGTTACATTCGAGGTCTCACCACGGTTTTGAACCTCCCGTTATAGCGAAAAACCGGAAATTGACTTACATTGATGTTGTTAAGATCACAAACAACTTTGAGAGGGTTCTTGGTAGGGGTGGTTTTGGTGTGGTTTATTACGGCGTCTTGAATAATGAACCAGTTGCGGTAAAGATGCTCACTGAGTCCACTGCACTTGGTTACAAACAGTTTAAAGCCGAGGTTGAGTTGCTTCTTAGAGTTCATCACAAAGATCTCACATGTCTTGTTGGATATTGTGAAGAAGGAGATAAAATGTCTCTAATCTATGAGTTCATGGCGAATGGTGACTTGAAAGAGCACTTATCAGGGAAGCGTGGACCGTCGATACTAACTTGGGAAGGAAGGCTTCGTATAGCAGCGGAATCAGCGCAAGGATTGGAATATTTGCACAATGGATGCAAACCGCAAATAGTTCACCGCGACATTAAGACTACTAACATCTTATTAAACGAGAAATTTCAAGCTAAGCTTGCGGATTTCGGGCTTTCACGGTCTTTTCCACTTGGAACTGAAACTCACGTCTCAACCATAGTTGCTGGAACTCCCGGATATCTTGATCCTGAATACTACAGAACTAATTGGTTGACCGAGAAAAGTGATGTGTTCAGCTTTGGTGTTGTTCTACTAGAGCTAGTAACAAACCAACCCGTGATAGACATGAAAAGAGAAAAATCACACATAGCTGAATGGGTAGGTTTGATGCTATCAAGAGGAGACATTAACAGCATTGTAGATCCTAAGCTTCAAGGAGACTTTGATCCAAACACGATATGGAAAGTTGTTGAGACCGCAATGACTTGCCTGAATCCGTCTTCTTCACGGAGACCGACAATGACTCAAGTCGTAATGGATCTGAAAGAATGTCTGAACATGGAGATGGCAAGAAACATGGGAAGCCGTATGACGGATTCAACTAATGATTCTTCAATTGAGCTGTCCATGAATTTCACAACAGAGCTTAATCCAGGAGCTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

894

Amino Acids

99.64

Weight (kDa)

5.82

Isoelectric Point (pI)

32.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 353 7.2e-115 Malectin-like domain
LRR_8 PF13855 412 - 468 1.5e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 588 - 854 2.9e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 589 - 851 2.5e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 392, 1247
AccII CGCG 2 cut(s) 596, 2127
AclWI GGATC 7 cut(s) 1151, 1248, 1456, 2258, 2435, 2459, 2565
AcsI RAATTY 5 cut(s) 166, 1012, 1277, 2162, 2650
AcyI GRCGYC 1 cut(s) 1809
AfaI GTAC 6 cut(s) 620, 685, 805, 887, 986, 1660
AfiI CCNNNNNNNGG 2 cut(s) 1649, 2611
AflIII ACRYGT 1 cut(s) 1925
AgeI ACCGGT 1 cut(s) 179
AjiI CACGTC 2 cut(s) 936, 2227
AjnI CCWGG 1 cut(s) 2671
AjuI GAANNNNNNNTTGG 2 cut(s) 1216, 1248
Alw21I GWGCWC 3 cut(s) 369, 852, 2007
Alw26I GTCTC 9 cut(s) 407, 1211, 1686, 1968, 2233, 2415, 2451, 2486, 2524
AlwI GGATC 7 cut(s) 1151, 1248, 1456, 2258, 2435, 2459, 2565
AlwNI CAGNNNCTG 2 cut(s) 749, 1655
ApeKI GCWGC 3 cut(s) 770, 1550, 2063
ApoI RAATTY 5 cut(s) 166, 1012, 1277, 2162, 2650
ArsI GACNNNNNNTTYG 2 cut(s) 369, 401
AsiGI ACCGGT 1 cut(s) 179
AspLEI GCGC 3 cut(s) 596, 1505, 2077
AspS9I GGNCC 3 cut(s) 377, 908, 2024
AsuC2I CCSGG 3 cut(s) 764, 1480, 2253
AsuHPI GGTGA 4 cut(s) 922, 1676, 2003, 2114
AvaII GGWCC 3 cut(s) 377, 908, 2024
BanII GRGCYC 2 cut(s) 369, 852
BbsI GAAGAC 2 cut(s) 930, 2511
Bbv12I GWGCWC 3 cut(s) 369, 852, 2007
BbvI GCAGC 3 cut(s) 782, 1562, 2075
BccI CCATC 1 cut(s) 2578
BceAI ACGGC 4 cut(s) 346, 1144, 1822, 2589
BciT130I CCWGG 1 cut(s) 2673
BciVI GTATCC 1 cut(s) 200
BcnI CCSGG 3 cut(s) 764, 1480, 2253
BcoDI GTCTC 9 cut(s) 407, 1211, 1686, 1968, 2233, 2415, 2451, 2486, 2524
BfaI CTAG 7 cut(s) 111, 120, 788, 1355, 2333, 2339, 2679
BfmI CTRYAG 3 cut(s) 393, 613, 2275
BfuI GTATCC 1 cut(s) 200
BglII AGATCT 2 cut(s) 1269, 1918
BisI GCNGC 5 cut(s) 771, 1070, 1169, 1551, 2064
BlpI GCTNAGC 1 cut(s) 2172
BlsI GCNGC 5 cut(s) 772, 1071, 1170, 1552, 2065
Bme1390I CCNGG 4 cut(s) 764, 1480, 2253, 2673
Bme18I GGWCC 3 cut(s) 377, 908, 2024
BmgBI CACGTC 2 cut(s) 936, 2227
BmgT120I GGNCC 3 cut(s) 377, 908, 2024
BmiI GGNNCC 2 cut(s) 239, 562
BmrFI CCNGG 4 cut(s) 764, 1480, 2253, 2673
BmrI ACTGGG 1 cut(s) 1156
BmsI GCATC 9 cut(s) 151, 204, 431, 961, 1090, 1562, 1830, 2093, 2397
BmuI ACTGGG 1 cut(s) 1156
BoxI GACNNNNGTC 1 cut(s) 2546
BpiI GAAGAC 2 cut(s) 930, 2511
Bpu10I CCTNAGC 1 cut(s) 2445
Bpu1102I GCTNAGC 1 cut(s) 2172
BpuEI CTTGAG 3 cut(s) 54, 1592, 2529
BpuMI CCSGG 3 cut(s) 764, 1480, 2253
Bsa29I ATCGAT 1 cut(s) 627
BsaBI GATNNNNATC 2 cut(s) 443, 1112
BsaHI GRCGYC 1 cut(s) 1809
BsaI GGTCTC 5 cut(s) 407, 1211, 1686, 2486, 2524
BsaJI CCNNGG 4 cut(s) 373, 607, 1687, 1884
BsaWI WCCGGW 4 cut(s) 179, 210, 1262, 1719
BsaXI ACNNNNNCTCC 2 cut(s) 1009, 1039
Bsc4I CCNNNNNNNGG 2 cut(s) 1649, 2611
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 6 cut(s) 674, 1151, 1296, 1339, 1660, 1826
Bse3DI GCAATG 2 cut(s) 1110, 2505
Bse8I GATNNNNATC 2 cut(s) 443, 1112
BseBI CCWGG 1 cut(s) 2673
BseCI ATCGAT 1 cut(s) 627
BseDI CCNNGG 4 cut(s) 373, 607, 1687, 1884
BseGI GGATG 1 cut(s) 2108
BseJI GATNNNNATC 2 cut(s) 443, 1112
BseLI CCNNNNNNNGG 2 cut(s) 1649, 2611
BseMI GCAATG 2 cut(s) 1110, 2505
BseMII CTCAG 3 cut(s) 60, 230, 1839
BseNI ACTGG 6 cut(s) 674, 1151, 1296, 1339, 1660, 1826
BseRI GAGGAG 2 cut(s) 1017, 2433
BseXI GCAGC 3 cut(s) 782, 1562, 2075
BsgI GTGCAG 2 cut(s) 830, 1842
Bsh1236I CGCG 2 cut(s) 596, 2127
BshTI ACCGGT 1 cut(s) 179
BshVI ATCGAT 1 cut(s) 627
BsiHKAI GWGCWC 3 cut(s) 369, 852, 2007
BsiSI CCGG 7 cut(s) 180, 211, 764, 1263, 1479, 1720, 2253
BslFI GGGAC 1 cut(s) 1328
BslI CCNNNNNNNGG 2 cut(s) 1649, 2611
BsmAI GTCTC 9 cut(s) 407, 1211, 1686, 1968, 2233, 2415, 2451, 2486, 2524
BsmBI CGTCTC 1 cut(s) 2233
BsmFI GGGAC 1 cut(s) 1328
Bso31I GGTCTC 5 cut(s) 407, 1211, 1686, 2486, 2524
Bsp1286I GDGCHC 3 cut(s) 369, 852, 2007
Bsp1407I TGTACA 1 cut(s) 885
Bsp1720I GCTNAGC 1 cut(s) 2172
BspCNI CTCAG 3 cut(s) 59, 229, 1840
BspDI ATCGAT 1 cut(s) 627
BspFNI CGCG 2 cut(s) 596, 2127
BspHI TCATGA 1 cut(s) 531
BspLI GGNNCC 2 cut(s) 239, 562
BspPI GGATC 7 cut(s) 1151, 1248, 1456, 2258, 2435, 2459, 2565
BspTNI GGTCTC 5 cut(s) 407, 1211, 1686, 2486, 2524
BsrDI GCAATG 2 cut(s) 1110, 2505
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 885
BsrI ACTGG 6 cut(s) 674, 1151, 1296, 1339, 1660, 1826
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 4 cut(s) 373, 607, 1687, 1884
BssNI GRCGYC 1 cut(s) 1809
BssT1I CCWWGG 1 cut(s) 607
Bst2UI CCWGG 1 cut(s) 2673
Bst4CI ACNGT 9 cut(s) 397, 601, 808, 1534, 1668, 1691, 1875, 2028, 2199
Bst6I CTCTTC 1 cut(s) 1613
BstACI GRCGYC 1 cut(s) 1809
BstAPI GCANNNNNTGC 1 cut(s) 1547
BstAUI TGTACA 1 cut(s) 885
BstC8I GCNNGC 2 cut(s) 1166, 2178
BstDEI CTNAG 8 cut(s) 25, 46, 216, 1273, 1848, 1901, 2172, 2445
BstDSI CCRYGG 1 cut(s) 1687
BstENI CCTNNNNNAGG 1 cut(s) 1647
BstF5I GGATG 1 cut(s) 2108
BstFNI CGCG 2 cut(s) 596, 2127
BstHHI GCGC 3 cut(s) 596, 1505, 2077
BstMAI GTCTC 9 cut(s) 407, 1211, 1686, 1968, 2233, 2415, 2451, 2486, 2524
BstMWI GCNNNNNNNGC 4 cut(s) 364, 1547, 2072, 2177
BstNI CCWGG 1 cut(s) 2673
BstNSI RCATGY 1 cut(s) 1929
BstPAI GACNNNNGTC 1 cut(s) 2546
BstSCI CCNGG 4 cut(s) 762, 1478, 2251, 2671
BstSFI CTRYAG 3 cut(s) 393, 613, 2275
BstUI CGCG 2 cut(s) 596, 2127
BstV1I GCAGC 3 cut(s) 782, 1562, 2075
BstV2I GAAGAC 2 cut(s) 930, 2511
BstX2I RGATCY 7 cut(s) 1156, 1240, 1269, 1448, 1918, 2440, 2557
BstYI RGATCY 7 cut(s) 1156, 1240, 1269, 1448, 1918, 2440, 2557
Bsu15I ATCGAT 1 cut(s) 627
BsuI GTATCC 1 cut(s) 200
BsuTUI ATCGAT 1 cut(s) 627
BtgI CCRYGG 1 cut(s) 1687
BtrI CACGTC 2 cut(s) 936, 2227
BtsCI GGATG 1 cut(s) 2108
BtsI GCAGTG 1 cut(s) 1854
BtsIMutI CAGTG 5 cut(s) 453, 702, 1530, 1845, 1854
Cac8I GCNNGC 2 cut(s) 1166, 2178
CaiI CAGNNNCTG 2 cut(s) 749, 1655
CciI TCATGA 1 cut(s) 531
CfoI GCGC 3 cut(s) 596, 1505, 2077
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 3 cut(s) 377, 908, 2024
ClaI ATCGAT 1 cut(s) 627
CseI GACGC 2 cut(s) 776, 1798
Csp6I GTAC 6 cut(s) 619, 684, 804, 886, 985, 1659
CspAI ACCGGT 1 cut(s) 179
CspCI CAANNNNNGTGG 2 cut(s) 1843, 1878
CviQI GTAC 6 cut(s) 619, 684, 804, 886, 985, 1659
DdeI CTNAG 8 cut(s) 25, 46, 216, 1273, 1848, 1901, 2172, 2445
DraI TTTAAA 1 cut(s) 1879
Eam1104I CTCTTC 1 cut(s) 1613
EarI CTCTTC 1 cut(s) 1613
Ecl136II GAGCTC 2 cut(s) 367, 850
Eco130I CCWWGG 1 cut(s) 607
Eco24I GRGCYC 2 cut(s) 369, 852
Eco31I GGTCTC 5 cut(s) 407, 1211, 1686, 2486, 2524
Eco32I GATATC 1 cut(s) 2258
Eco47I GGWCC 3 cut(s) 377, 908, 2024
Eco53kI GAGCTC 2 cut(s) 367, 850
EcoICRI GAGCTC 2 cut(s) 367, 850
EcoNI CCTNNNNNAGG 1 cut(s) 1647
EcoRII CCWGG 1 cut(s) 2671
EcoRV GATATC 1 cut(s) 2258
EcoT14I CCWWGG 1 cut(s) 607
EcoT22I ATGCAT 1 cut(s) 831
EcoT38I GRGCYC 2 cut(s) 369, 852
ErhI CCWWGG 1 cut(s) 607
Esp3I CGTCTC 1 cut(s) 2233
FalI AAGNNNNNCTT 4 cut(s) 2037, 2069, 2160, 2192
FaqI GGGAC 1 cut(s) 1328
FblI GTMKAC 2 cut(s) 392, 1247
Fnu4HI GCNGC 5 cut(s) 771, 1070, 1169, 1551, 2064
FokI GGATG 1 cut(s) 2115
FriOI GRGCYC 2 cut(s) 369, 852
Fsp4HI GCNGC 5 cut(s) 771, 1070, 1169, 1551, 2064
FspBI CTAG 7 cut(s) 111, 120, 788, 1355, 2333, 2339, 2679
GlaI GCGC 3 cut(s) 595, 1504, 2076
GluI GCNGC 5 cut(s) 771, 1070, 1169, 1551, 2064
HapII CCGG 7 cut(s) 180, 211, 764, 1263, 1479, 1720, 2253
HgaI GACGC 2 cut(s) 776, 1798
HhaI GCGC 3 cut(s) 596, 1505, 2077
Hin1I GRCGYC 1 cut(s) 1809
Hin6I GCGC 3 cut(s) 594, 1503, 2075
HinP1I GCGC 3 cut(s) 594, 1503, 2075
HincII GTYRAC 4 cut(s) 604, 1060, 1210, 2292
HindII GTYRAC 4 cut(s) 604, 1060, 1210, 2292
HindIII AAGCTT 3 cut(s) 1628, 2174, 2447
HpaI GTTAAC 2 cut(s) 604, 1060
HpaII CCGG 7 cut(s) 180, 211, 764, 1263, 1479, 1720, 2253
HphI GGTGA 4 cut(s) 922, 1676, 2003, 2114
Hpy188I TCNGA 8 cut(s) 160, 314, 377, 581, 665, 1288, 2562, 2574
Hpy99I CGWCG 3 cut(s) 302, 1446, 2032
HpyAV CCTTC 7 cut(s) 335, 583, 1145, 1463, 1943, 2039, 2043
HpyCH4III ACNGT 9 cut(s) 397, 601, 808, 1534, 1668, 1691, 1875, 2028, 2199
HpyCH4IV ACGT 6 cut(s) 588, 802, 819, 935, 1457, 2226
HpyF10VI GCNNNNNNNGC 4 cut(s) 364, 1547, 2072, 2177
HpyF3I CTNAG 8 cut(s) 25, 46, 216, 1273, 1848, 1901, 2172, 2445
HpySE526I ACGT 6 cut(s) 588, 802, 819, 935, 1457, 2226
Hsp92I GRCGYC 1 cut(s) 1809
HspAI GCGC 3 cut(s) 594, 1503, 2075
KspAI GTTAAC 2 cut(s) 604, 1060
LmnI GCTCC 2 cut(s) 1580, 2675
Lsp1109I GCAGC 3 cut(s) 782, 1562, 2075
LweI GCATC 9 cut(s) 151, 204, 431, 961, 1090, 1562, 1830, 2093, 2397
MaeI CTAG 7 cut(s) 111, 120, 788, 1355, 2333, 2339, 2679
MaeII ACGT 6 cut(s) 588, 802, 819, 935, 1457, 2226
MaeIII GTNAC 8 cut(s) 397, 672, 739, 1591, 1668, 1865, 1991, 2341
MfeI CAATTG 1 cut(s) 2634
MflI RGATCY 7 cut(s) 1156, 1240, 1269, 1448, 1918, 2440, 2557
MhlI GDGCHC 3 cut(s) 369, 852, 2007
MlyI GAGTC 5 cut(s) 208, 544, 643, 1859, 2536
MmeI TCCRAC 2 cut(s) 779, 1915
Mph1103I ATGCAT 1 cut(s) 831
MslI CAYNNNNRTG 2 cut(s) 903, 2582
MspA1I CMGCKG 2 cut(s) 1171, 2066
MspI CCGG 7 cut(s) 180, 211, 764, 1263, 1479, 1720, 2253
MspR9I CCNGG 4 cut(s) 764, 1480, 2253, 2673
MunI CAATTG 1 cut(s) 2634
MvaI CCWGG 1 cut(s) 2673
MvnI CGCG 2 cut(s) 596, 2127
MwoI GCNNNNNNNGC 4 cut(s) 364, 1547, 2072, 2177
NciI CCSGG 3 cut(s) 764, 1480, 2253
NlaIV GGNNCC 2 cut(s) 239, 562
NmeAIII GCCGAG 1 cut(s) 1909
NmuCI GTSAC 3 cut(s) 672, 739, 1991
NsiI ATGCAT 1 cut(s) 831
NspI RCATGY 1 cut(s) 1929
PagI TCATGA 1 cut(s) 531
PciI ACATGT 1 cut(s) 1925
PfoI TCCNGGA 2 cut(s) 2251, 2671
PinAI ACCGGT 1 cut(s) 179
PkrI GCNGC 5 cut(s) 772, 1071, 1170, 1552, 2065
PleI GAGTC 5 cut(s) 208, 544, 643, 1858, 2536
PpsI GAGTC 5 cut(s) 208, 544, 643, 1858, 2536
PscI ACATGT 1 cut(s) 1925
PshAI GACNNNNGTC 1 cut(s) 2546
Psp124BI GAGCTC 2 cut(s) 369, 852
Psp6I CCWGG 1 cut(s) 2671
PspGI CCWGG 1 cut(s) 2671
PspN4I GGNNCC 2 cut(s) 239, 562
PspPI GGNCC 3 cut(s) 377, 908, 2024
PsrI GAACNNNNNNTAC 2 cut(s) 527, 559
PstNI CAGNNNCTG 2 cut(s) 749, 1655
PsuI RGATCY 7 cut(s) 1156, 1240, 1269, 1448, 1918, 2440, 2557
RsaI GTAC 6 cut(s) 620, 685, 805, 887, 986, 1660
RsaNI GTAC 6 cut(s) 619, 684, 804, 886, 985, 1659
RseI CAYNNNNRTG 2 cut(s) 903, 2582
SacI GAGCTC 2 cut(s) 369, 852
SatI GCNGC 5 cut(s) 771, 1070, 1169, 1551, 2064
Sau96I GGNCC 3 cut(s) 377, 908, 2024
SchI GAGTC 5 cut(s) 208, 544, 643, 1859, 2536
ScrFI CCNGG 4 cut(s) 764, 1480, 2253, 2673
SduI GDGCHC 3 cut(s) 369, 852, 2007
SfaNI GCATC 9 cut(s) 151, 204, 431, 961, 1090, 1562, 1830, 2093, 2397
SfcI CTRYAG 3 cut(s) 393, 613, 2275
SinI GGWCC 3 cut(s) 377, 908, 2024
SmiMI CAYNNNNRTG 2 cut(s) 903, 2582
SmlI CTYRAG 3 cut(s) 69, 1607, 2544
SmoI CTYRAG 3 cut(s) 69, 1607, 2544
SspI AATATT 1 cut(s) 2090
SspMI CTAG 7 cut(s) 111, 120, 788, 1355, 2333, 2339, 2679
SstI GAGCTC 2 cut(s) 369, 852
StyD4I CCNGG 4 cut(s) 762, 1478, 2251, 2671
StyI CCWWGG 1 cut(s) 607
TaaI ACNGT 9 cut(s) 397, 601, 808, 1534, 1668, 1691, 1875, 2028, 2199
TaiI ACGT 6 cut(s) 591, 805, 822, 938, 1460, 2229
TaqI TCGA 7 cut(s) 363, 553, 627, 1016, 1467, 1676, 2030
TaqII GACCGA 3 cut(s) 431, 2309, 2548
TatI WGTACW 2 cut(s) 885, 984
TauI GCSGC 2 cut(s) 1072, 1171
TscAI CASTG 5 cut(s) 460, 702, 1537, 1852, 1861
TseFI GTSAC 3 cut(s) 672, 739, 1991
TseI GCWGC 3 cut(s) 770, 1550, 2063
Tsp45I GTSAC 3 cut(s) 672, 739, 1991
TspGWI ACGGA 7 cut(s) 259, 636, 642, 931, 2505, 2542, 2627
TspRI CASTG 5 cut(s) 460, 702, 1537, 1852, 1861
VpaK11BI GGWCC 3 cut(s) 377, 908, 2024
XagI CCTNNNNNAGG 1 cut(s) 1647
XapI RAATTY 5 cut(s) 166, 1012, 1277, 2162, 2650
XceI RCATGY 1 cut(s) 1929
XcmI CCANNNNNNNNNTGG 1 cut(s) 2475
XmiI GTMKAC 2 cut(s) 392, 1247
XspI CTAG 7 cut(s) 111, 120, 788, 1355, 2333, 2339, 2679
Zsp2I ATGCAT 1 cut(s) 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.