RchiOBHm_Chr2g0141641

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
59195369 .. 59196046
678 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51190

Sequence Viewer

Length: 513 bp
ATGTTTAATTGTCTGGTGAAGTCAAACAAAGGAATTCCATTTATATCAGCAATAGAGTTAAGGCCTTTACCTGATGAAAATTATAACGTAGGGGACTACTCCTTGGCACTAATCTGGCGATATGACATTGGTCAAACTGCTAAACAATACAGGTATCCAAGTGATCTTCATGATCGTCTATGGTATCCCTTTGACCGCGATGATTGGACGCAATTAAATACCTCATTAAGCAGCACTACCGAGGACAATAGTTACCAAGTTCCATCTATTGTCATGTGTACTGCTGCCACACCCAAAAATGCAGAGGATTCCTTGAATATTTTCTGGCTACCTTCTGATAGCAATGCACAGTATCATATTTACGTGCACTTTGCAGAAGTAGAAAAGCTCCAAGCGAACGAGTCTAGACAATTCAATATTACTTTTAATAGAGAGCCCTTTTATGGGCCCTCTTCTCCTGGATACATGTCCGCCACCACTATTTATAGCCGAGAGGCTTGGAGTCCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

170

Amino Acids

19.68

Weight (kDa)

4.84

Isoelectric Point (pI)

63.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 4 - 164 7.6e-49 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 84
AccII CGCG 1 cut(s) 198
AciI CCGC 2 cut(s) 196, 471
AcsI RAATTY 1 cut(s) 33
AfaI GTAC 1 cut(s) 280
AfiI CCNNNNNNNGG 2 cut(s) 443, 444
AflIII ACRYGT 1 cut(s) 465
AgsI TTSAA 2 cut(s) 316, 415
AjnI CCWGG 1 cut(s) 457
AluBI AGCT 1 cut(s) 388
AluI AGCT 1 cut(s) 388
Alw21I GWGCWC 1 cut(s) 369
Alw44I GTGCAC 1 cut(s) 365
AoxI GGCC 2 cut(s) 62, 446
ApaI GGGCCC 1 cut(s) 450
ApaLI GTGCAC 1 cut(s) 365
ApeKI GCWGC 2 cut(s) 231, 284
ApoI RAATTY 1 cut(s) 33
Asp700I GAANNNNTTC 1 cut(s) 320
AspS9I GGNCC 2 cut(s) 446, 447
AsuHPI GGTGA 1 cut(s) 28
BaeGI GKGCMC 2 cut(s) 369, 450
BanII GRGCYC 2 cut(s) 438, 450
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 2 cut(s) 243, 271
BccI CCATC 1 cut(s) 271
BciT130I CCWGG 1 cut(s) 459
BciVI GTATCC 3 cut(s) 165, 195, 455
BfaI CTAG 1 cut(s) 405
BfuI GTATCC 3 cut(s) 165, 195, 455
BisI GCNGC 2 cut(s) 232, 285
BlsI GCNGC 2 cut(s) 233, 286
Bme1390I CCNGG 1 cut(s) 459
BmgT120I GGNCC 2 cut(s) 446, 447
BmiI GGNNCC 1 cut(s) 448
BmrFI CCNGG 1 cut(s) 459
BoxI GACNNNNGTC 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 364
BsaJI CCNNGG 2 cut(s) 102, 240
Bsc4I CCNNNNNNNGG 2 cut(s) 443, 444
Bse3DI GCAATG 1 cut(s) 349
BseBI CCWGG 1 cut(s) 459
BseDI CCNNGG 2 cut(s) 102, 240
BseLI CCNNNNNNNGG 2 cut(s) 443, 444
BseMI GCAATG 1 cut(s) 349
BseSI GKGCMC 2 cut(s) 369, 450
BseXI GCAGC 2 cut(s) 243, 271
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 2 cut(s) 64, 448
BsiHKAI GWGCWC 1 cut(s) 369
BslFI GGGAC 1 cut(s) 107
BslI CCNNNNNNNGG 2 cut(s) 443, 444
BsmFI GGGAC 1 cut(s) 107
BsnI GGCC 2 cut(s) 64, 448
Bsp120I GGGCCC 1 cut(s) 446
Bsp1286I GDGCHC 3 cut(s) 369, 438, 450
Bsp143I GATC 2 cut(s) 163, 172
BspACI CCGC 2 cut(s) 196, 471
BspANI GGCC 2 cut(s) 64, 448
BspFNI CGCG 1 cut(s) 198
BspHI TCATGA 1 cut(s) 169
BspLI GGNNCC 1 cut(s) 448
BsrDI GCAATG 1 cut(s) 349
BssECI CCNNGG 2 cut(s) 102, 240
BssMI GATC 2 cut(s) 163, 172
BssT1I CCWWGG 1 cut(s) 102
Bst2UI CCWGG 1 cut(s) 459
Bst4CI ACNGT 1 cut(s) 351
Bst6I CTCTTC 1 cut(s) 457
BstBAI YACGTR 1 cut(s) 364
BstFNI CGCG 1 cut(s) 198
BstKTI GATC 2 cut(s) 166, 175
BstMBI GATC 2 cut(s) 163, 172
BstNI CCWGG 1 cut(s) 459
BstNSI RCATGY 1 cut(s) 469
BstPAI GACNNNNGTC 1 cut(s) 129
BstSCI CCNGG 1 cut(s) 457
BstSLI GKGCMC 2 cut(s) 369, 450
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 2 cut(s) 243, 271
BsuI GTATCC 3 cut(s) 165, 195, 455
BsuRI GGCC 2 cut(s) 64, 448
BtgZI GCGATG 1 cut(s) 213
CciI TCATGA 1 cut(s) 169
Cfr13I GGNCC 2 cut(s) 446, 447
CseI GACGC 1 cut(s) 217
Csp6I GTAC 1 cut(s) 279
CviAII CATG 4 cut(s) 170, 274, 466, 510
CviJI RGCY 7 cut(s) 64, 328, 388, 436, 448, 489, 497
CviKI_1 RGCY 7 cut(s) 64, 328, 388, 436, 448, 489, 497
CviQI GTAC 1 cut(s) 279
DpnI GATC 2 cut(s) 165, 174
DpnII GATC 2 cut(s) 163, 172
Eam1104I CTCTTC 1 cut(s) 457
EarI CTCTTC 1 cut(s) 457
EciI GGCGGA 1 cut(s) 460
Eco130I CCWWGG 1 cut(s) 102
Eco147I AGGCCT 1 cut(s) 64
Eco24I GRGCYC 2 cut(s) 438, 450
EcoO109I RGGNCCY 1 cut(s) 447
EcoRI GAATTC 1 cut(s) 33
EcoRII CCWGG 1 cut(s) 457
EcoT14I CCWWGG 1 cut(s) 102
EcoT38I GRGCYC 2 cut(s) 438, 450
ErhI CCWWGG 1 cut(s) 102
FaeI CATG 4 cut(s) 173, 277, 469, 513
FaqI GGGAC 1 cut(s) 107
FatI CATG 4 cut(s) 169, 273, 465, 509
Fnu4HI GCNGC 2 cut(s) 232, 285
FriOI GRGCYC 2 cut(s) 438, 450
Fsp4HI GCNGC 2 cut(s) 232, 285
FspBI CTAG 1 cut(s) 405
GluI GCNGC 2 cut(s) 232, 285
HaeIII GGCC 2 cut(s) 64, 448
HgaI GACGC 1 cut(s) 217
Hin1II CATG 4 cut(s) 173, 277, 469, 513
HinfI GANTC 3 cut(s) 308, 401, 502
HphI GGTGA 1 cut(s) 28
Hpy166II GTNNAC 2 cut(s) 279, 367
Hpy188I TCNGA 1 cut(s) 337
Hpy188III TCNNGA 2 cut(s) 170, 405
Hpy8I GTNNAC 2 cut(s) 279, 367
HpyAV CCTTC 1 cut(s) 342
HpyCH4III ACNGT 1 cut(s) 351
HpyCH4IV ACGT 2 cut(s) 87, 363
HpyCH4V TGCA 4 cut(s) 302, 347, 367, 374
HpySE526I ACGT 2 cut(s) 87, 363
Hsp92II CATG 4 cut(s) 173, 277, 469, 513
Kzo9I GATC 2 cut(s) 163, 172
LmnI GCTCC 1 cut(s) 393
LpnPI CCDG 6 cut(s) 84, 100, 136, 310, 444, 471
Lsp1109I GCAGC 2 cut(s) 243, 271
MaeI CTAG 1 cut(s) 405
MaeII ACGT 2 cut(s) 87, 363
MaeIII GTNAC 1 cut(s) 251
MalI GATC 2 cut(s) 165, 174
MboI GATC 2 cut(s) 163, 172
MboII GAAGA 2 cut(s) 158, 444
MhlI GDGCHC 3 cut(s) 369, 438, 450
MluCI AATT 5 cut(s) 7, 33, 79, 212, 410
MlyI GAGTC 2 cut(s) 410, 511
MnlI CCTC 5 cut(s) 232, 235, 298, 460, 487
MroXI GAANNNNTTC 1 cut(s) 320
MseI TTAA 5 cut(s) 6, 59, 215, 227, 426
MspR9I CCNGG 1 cut(s) 459
MvaI CCWGG 1 cut(s) 459
MvnI CGCG 1 cut(s) 198
NdeII GATC 2 cut(s) 163, 172
NlaIII CATG 4 cut(s) 173, 277, 469, 513
NlaIV GGNNCC 1 cut(s) 448
NspI RCATGY 1 cut(s) 469
PagI TCATGA 1 cut(s) 169
PceI AGGCCT 1 cut(s) 64
PciI ACATGT 1 cut(s) 465
PdmI GAANNNNTTC 1 cut(s) 320
PfeI GAWTC 1 cut(s) 308
PfoI TCCNGGA 1 cut(s) 457
PkrI GCNGC 2 cut(s) 233, 286
PleI GAGTC 2 cut(s) 409, 510
PpsI GAGTC 2 cut(s) 409, 510
Ppu21I YACGTR 1 cut(s) 364
PscI ACATGT 1 cut(s) 465
PshAI GACNNNNGTC 1 cut(s) 129
PsiI TTATAA 1 cut(s) 84
Psp6I CCWGG 1 cut(s) 457
PspGI CCWGG 1 cut(s) 457
PspN4I GGNNCC 1 cut(s) 448
PspOMI GGGCCC 1 cut(s) 446
PspPI GGNCC 2 cut(s) 446, 447
RsaI GTAC 1 cut(s) 280
RsaNI GTAC 1 cut(s) 279
SaqAI TTAA 5 cut(s) 6, 59, 215, 227, 426
SatI GCNGC 2 cut(s) 232, 285
Sau3AI GATC 2 cut(s) 163, 172
Sau96I GGNCC 2 cut(s) 446, 447
SchI GAGTC 2 cut(s) 410, 511
ScrFI CCNGG 1 cut(s) 459
SduI GDGCHC 3 cut(s) 369, 438, 450
SetI ASST 7 cut(s) 73, 90, 155, 224, 334, 366, 390
Sse9I AATT 5 cut(s) 7, 33, 79, 212, 410
SseBI AGGCCT 1 cut(s) 64
SsiI CCGC 2 cut(s) 196, 471
SspI AATATT 2 cut(s) 319, 418
SspMI CTAG 1 cut(s) 405
StuI AGGCCT 1 cut(s) 64
StyD4I CCNGG 1 cut(s) 457
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 1 cut(s) 351
TaiI ACGT 2 cut(s) 90, 366
TasI AATT 5 cut(s) 7, 33, 79, 212, 410
TatI WGTACW 1 cut(s) 278
TfiI GAWTC 1 cut(s) 308
Tru1I TTAA 5 cut(s) 6, 59, 215, 227, 426
Tru9I TTAA 5 cut(s) 6, 59, 215, 227, 426
TseI GCWGC 2 cut(s) 231, 284
TspDTI ATGAA 2 cut(s) 90, 158
VneI GTGCAC 1 cut(s) 365
XapI RAATTY 1 cut(s) 33
XbaI TCTAGA 1 cut(s) 404
XceI RCATGY 1 cut(s) 469
XmnI GAANNNNTTC 1 cut(s) 320
XspI CTAG 1 cut(s) 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.