AT5G59660

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000083
Physical Location & Seq
Forward (+)
24035650 .. 24039979
4330 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59660.2

Sequence Viewer

Length: 2559 bp
ATGGTTTTCTTGATTTTTCCTTGGAAGGTTAGAGAAGATGATTATATGAAGAATTCTCTTGGCCTTTTGTTCCTGCTAGTCTCCATCATTCATATTGTTCGAGCTCAAGACCAACAAGGATTCATCAGTTTGGATTGCGGACTCCCTGCGAATGAACTGTCTCCTTATGAAGAGAGTTTCACTGGACTGCGGTTCTCTTCGGATGAAAAGTTCATACGTAGTGGAAAAAACGGTCGAATCCGAGAAAATCCTCAGGGATACGCTAAGCCGTTTGTATATGGAAATTATGATGGTTTTGACCTTAAGCCAAAGTTTGATCTGTATCTTGGACCTAATCTATGGGCCACGGTGGATTTGCAAACAGAAGTTAATGACTGGGGAAACTATACCGCTAATATCGGCTTTGGAATTATGGGAAATGGTTCTTATATCACTAAGTCTGGTTCCTTGAATCTTTTATCACGAACATATCTTAGCAAGTCAGGATCTGATCTACGCTACATGAAAGATGTATATGATCGCACATGGGTATCATATGGAGCCAGTTTTCGGACGGGATGGACCCAGATTTATACCGCTCTTGAAGTGAACAATTCCAACAATTATGCTCCACCGAAAGATGCGCTAAGAAATGCTGCCACACCGACTAATGCCAGTGCACCATTGACGATTGAATGGCCTTCAGGAAGTCCCAGTCAGGAAGTCCCAGGGACCAATATTACTTTTTTTTCTGACCCTATCATTCCTAAGAAACTTGACATAACTAGTGTCCAAAGTGTGACCCCAAAAACTTGCCAAGAAGGGAAATGTAGTTTGCAGCTAACAAGAACCAACCGATCAACTCTTCCACCTCTACTTAACGCTTTGGAAATCTATGCAGTCATCCAGTTCCCGCAATCCGAAACAAATGAAATTGACGTGATTGCTATAAAAAAGATTGAAGCCATGTACGAATCGAGTAGAATCAACTGGCAAGGCGATCCATGTGTCCCTCAACATTTTATCTGGGATGGTTTAAATTGCAGCAATACGGATATCTCCACACCACCAAGAATTACTTCTTTAAACTTGTCTTCAAGTGGTTTAACTGGAAACATAGCTGCTGCCATTCAAAACCTTACGCAACTAGAAAAACTGGACTTGTCGAATAACAACTTGACTGGAGGGGTGCCGGAGTTTCTAGGCAACATGAAATCGTTGTCCTTCATTGGGAACAATCTTAGTGGTTCAATACCTCAAACTCTTCAAAAGAAGAGACTAGAACTATTTGTTGAAGGAAACCCAAGGCTCTGTCTCTCTGATTCATGTAGGAAACCACCTAAGAAGAAAATTCATGTGGCAATTGTTGCATCAGTTGCTTCTGCTGCCATTGTCGTTGCTGTATTGATTCTTTTTCTTATACTCAGAAAGAGAAAGTCAACTATTGTACAAGGTCAACACCTGCCACCGAGCACATCAACTGTAGATGTTACATTTGCTAATAAGAAAAGCAAAAGGTTCACATATTTAGAGGTCATCAAAATGACAAACAACTTCCAAAGAGTCTTAGGTAAAGGAGGGTTCGGCATGGTGTATCATGGTACTGTAAAGGGTTCTGATCAGGTGGCCGTTAAAGTACTCTCTCAATCGTCAACTCAAGGGTATAAACAATTCAAAGCAGAGGCCCTTATCTATGAGTTTCTTCCCAATGGAGACCTAAAACAACATTTGTCAGGAAAAGGAGGTAAATCCATCATCAACTGGAGTATTCGTCTACAAATAGCCTTGAACGCAGCACTAGGATTGGAGTACTTACATATTGGATGCATACCGCCAATGGTTCATAGAGATGTCAAAACTGCCAACATATTGCTAGATGAGAATTTCAAGGCCAAACTCGCTGATTTTGGTCTCTCAAGATCTTTCCAAGTTAGAGGTGAGTCCTATGATTCGACATTCGTTGCTGGTACTCCTGGATACCTTGATCCCGAATATTACCCTACAAGTCGGTTAGCTGCGAAGAGTGATGTCTACAGTTATGGGATCGTGTTATTGGAGATGATCACAAACCAGCCCGTGATCTCTGAAAAGTACCACATAACAGAATGGGTTGGCTCTAAGCTTAACCGAGGTGATATTATTGAGATCATGGATCCAAACCTTGGCGGGGTTTATGACTCTAATTCTGCGTGGAGAGCACTTGAGCTGGCAATGTCATGCGCAGACCCTTCTTCCTCGAAACGACCAACCATGTCTCAGGTAATCAACGAGCTAAAAGAGTGTCTTGTGTGTGAAAACTCGAGGATGAGCAAGACTCGAGGCATGGAATATCAAGAAATGAATATTAGCTTGGATACTTCGGTGGTTCCTGGAGCAAGATACCCAATGGGCCAAACAAGCGTCTGTGAATGGCGGCAATTTCTTAACGCGAATCAATCGTCGATCGCTGGAGAAAAGGTCTCACCGCCGGGAACTGCTGATGATGAAGAAGCGCTCTTTTTCTCGCTCGACGGGATCTTTCGCCGTCGTAAACCACCGGAGATTATCATTCTCAGTCGCCGACTCGCCGAAGCCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

852

Amino Acids

94.47

Weight (kDa)

8.54

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 36 - 103 9.9e-24 Malectin-like domain
Malectin_like PF12819 116 - 212 6.1e-20 Malectin-like domain
Malectin_like PF12819 221 - 272 1.4e-09 Malectin-like domain
Pkinase PF00069 532 - 727 2.3e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 533 - 729 8.1e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1449
Acc16I TGCGCA 1 cut(s) 2200
Acc36I ACCTGC 1 cut(s) 1449
AccB1I GGYRCC 1 cut(s) 1168
AccB7I CCANNNNNTGG 1 cut(s) 2141
AccBSI CCGCTC 1 cut(s) 578
AccI GTMKAC 2 cut(s) 1753, 2010
AccII CGCG 1 cut(s) 2408
AciI CCGC 9 cut(s) 138, 190, 390, 576, 893, 1811, 2145, 2392, 2444
AclWI GGATC 7 cut(s) 493, 974, 1958, 2030, 2126, 2139, 2501
AcoI YGGCCR 1 cut(s) 1605
AcsI RAATTY 3 cut(s) 52, 1329, 1861
AcuI CTGAAG 1 cut(s) 666
AfaI GTAC 7 cut(s) 950, 1428, 1582, 1617, 1790, 1948, 2072
AfeI AGCGCT 1 cut(s) 2472
AfiI CCNNNNNNNGG 4 cut(s) 549, 1209, 2141, 2146
AflII CTTAAG 1 cut(s) 302
AhlI ACTAGT 1 cut(s) 764
AjiI CACGTC 1 cut(s) 919
AjnI CCWGG 3 cut(s) 706, 1951, 2347
AjuI GAANNNNNNNTTGG 4 cut(s) 1042, 1074, 2312, 2344
AloI GAACNNNNNNTCC 2 cut(s) 194, 226
AluBI AGCT 8 cut(s) 104, 820, 1100, 1994, 2101, 2185, 2251, 2328
AluI AGCT 8 cut(s) 104, 820, 1100, 1994, 2101, 2185, 2251, 2328
Alw21I GWGCWC 4 cut(s) 106, 661, 1454, 2179
Alw26I GTCTC 8 cut(s) 85, 165, 1249, 1298, 1686, 1895, 2238, 2443
Alw44I GTGCAC 1 cut(s) 657
AlwI GGATC 7 cut(s) 493, 974, 1958, 2030, 2126, 2139, 2501
AlwNI CAGNNNCTG 1 cut(s) 488
Ama87I CYCGRG 2 cut(s) 2278, 2295
Aor51HI AGCGCT 1 cut(s) 2472
AoxI GGCC 7 cut(s) 61, 342, 677, 1605, 1662, 1869, 2368
ApaLI GTGCAC 1 cut(s) 657
ApeKI GCWGC 8 cut(s) 635, 817, 1023, 1100, 1103, 1364, 1772, 1994
ApoI RAATTY 3 cut(s) 52, 1329, 1861
ArsI GACNNNNNNTTYG 4 cut(s) 143, 175, 2402, 2434
Asp700I GAANNNNTTC 2 cut(s) 421, 1057
AspLEI GCGC 3 cut(s) 625, 2201, 2473
AspS9I GGNCC 6 cut(s) 329, 342, 561, 711, 1663, 2368
AsuC2I CCSGG 1 cut(s) 2448
AsuHPI GGTGA 3 cut(s) 1928, 2123, 2433
AvaI CYCGRG 2 cut(s) 2278, 2295
AvaII GGWCC 3 cut(s) 329, 561, 711
AxyI CCTNAGG 1 cut(s) 252
BaeGI GKGCMC 1 cut(s) 661
BaeI ACNNNNGTAYC 4 cut(s) 513, 546, 2325, 2358
BamHI GGATCC 1 cut(s) 2131
BanI GGYRCC 1 cut(s) 1168
BanII GRGCYC 1 cut(s) 106
BbsI GAAGAC 1 cut(s) 1065
Bbv12I GWGCWC 4 cut(s) 106, 661, 1454, 2179
BbvI GCAGC 8 cut(s) 622, 829, 1035, 1087, 1090, 1351, 1784, 1981
BccI CCATC 5 cut(s) 92, 284, 552, 1004, 1739
BceAI ACGGC 3 cut(s) 253, 1592, 2487
BciT130I CCWGG 3 cut(s) 708, 1953, 2349
BciVI GTATCC 3 cut(s) 251, 1949, 2326
BclI TGATCA 2 cut(s) 1597, 2040
BcnI CCSGG 1 cut(s) 2448
BcoDI GTCTC 8 cut(s) 85, 165, 1249, 1298, 1686, 1895, 2238, 2443
BcuI ACTAGT 1 cut(s) 764
BfaI CTAG 7 cut(s) 77, 765, 1127, 1181, 1259, 1778, 1853
BfmI CTRYAG 2 cut(s) 1461, 2011
BfoI RGCGCY 1 cut(s) 2474
BfrI CTTAAG 1 cut(s) 302
BfuAI ACCTGC 1 cut(s) 1449
BfuI GTATCC 3 cut(s) 251, 1949, 2326
BglII AGATCT 1 cut(s) 1898
BisI GCNGC 9 cut(s) 636, 818, 1024, 1101, 1104, 1365, 1773, 1995, 2393
BlpI GCTNAGC 1 cut(s) 264
BlsI GCNGC 9 cut(s) 637, 819, 1025, 1102, 1105, 1366, 1774, 1996, 2394
BmcAI AGTACT 2 cut(s) 1617, 1790
Bme1390I CCNGG 4 cut(s) 708, 1953, 2349, 2448
Bme18I GGWCC 3 cut(s) 329, 561, 711
BmeT110I CYCGRG 2 cut(s) 2278, 2295
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 6 cut(s) 329, 342, 561, 711, 1663, 2368
BmiI GGNNCC 7 cut(s) 445, 541, 563, 712, 1170, 2133, 2346
BmrFI CCNGG 4 cut(s) 708, 1953, 2349, 2448
BmrI ACTGGG 2 cut(s) 385, 687
BmsI GCATC 3 cut(s) 610, 1358, 1793
BmuI ACTGGG 2 cut(s) 385, 687
BpiI GAAGAC 1 cut(s) 1065
BplI GAGNNNNNCTC 2 cut(s) 2278, 2310
BpmI CTGGAG 4 cut(s) 1182, 1762, 2370, 2448
Bpu1102I GCTNAGC 1 cut(s) 264
BpuEI CTTGAG 4 cut(s) 90, 1620, 1879, 2201
BpuMI CCSGG 1 cut(s) 2448
BsaAI YACGTR 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 321
BsaI GGTCTC 3 cut(s) 1686, 1895, 2443
BsaJI CCNNGG 7 cut(s) 20, 345, 706, 707, 1283, 2107, 2140
BsaWI WCCGGW 1 cut(s) 2515
BsaXI ACNNNNNCTCC 4 cut(s) 1735, 1765, 2421, 2451
Bsc4I CCNNNNNNNGG 4 cut(s) 549, 1209, 2141, 2146
Bse21I CCTNAGG 1 cut(s) 252
Bse3DI GCAATG 1 cut(s) 2196
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 3 cut(s) 708, 1953, 2349
BseDI CCNNGG 7 cut(s) 20, 345, 706, 707, 1283, 2107, 2140
BseGI GGATG 6 cut(s) 208, 563, 882, 1015, 1808, 2289
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 4 cut(s) 549, 1209, 2141, 2146
BseMI GCAATG 1 cut(s) 2196
BseMII CTCAG 4 cut(s) 266, 1417, 2249, 2545
BseSI GKGCMC 1 cut(s) 661
BseXI GCAGC 8 cut(s) 622, 829, 1035, 1087, 1090, 1351, 1784, 1981
Bsh1236I CGCG 1 cut(s) 2408
Bsh1285I CGRYCG 2 cut(s) 235, 2424
BshFI GGCC 7 cut(s) 63, 344, 679, 1607, 1664, 1871, 2370
BshNI GGYRCC 1 cut(s) 1168
BsiEI CGRYCG 2 cut(s) 235, 2424
BsiHKAI GWGCWC 4 cut(s) 106, 661, 1454, 2179
BsiHKCI CYCGRG 2 cut(s) 2278, 2295
BsiSI CCGG 3 cut(s) 1172, 2447, 2516
BslFI GGGAC 4 cut(s) 675, 689, 724, 974
BslI CCNNNNNNNGG 4 cut(s) 549, 1209, 2141, 2146
BsmAI GTCTC 8 cut(s) 85, 165, 1249, 1298, 1686, 1895, 2238, 2443
BsmFI GGGAC 4 cut(s) 675, 689, 724, 974
BsnI GGCC 7 cut(s) 63, 344, 679, 1607, 1664, 1871, 2370
Bso31I GGTCTC 3 cut(s) 1686, 1895, 2443
BsoBI CYCGRG 2 cut(s) 2278, 2295
Bsp1286I GDGCHC 4 cut(s) 106, 661, 1454, 2179
Bsp1407I TGTACA 1 cut(s) 1426
Bsp1720I GCTNAGC 1 cut(s) 264
BspACI CCGC 9 cut(s) 138, 190, 390, 576, 893, 1811, 2145, 2392, 2444
BspANI GGCC 7 cut(s) 63, 344, 679, 1607, 1664, 1871, 2370
BspCNI CTCAG 4 cut(s) 265, 1416, 2248, 2544
BspFNI CGCG 1 cut(s) 2408
BspLI GGNNCC 7 cut(s) 445, 541, 563, 712, 1170, 2133, 2346
BspMI ACCTGC 1 cut(s) 1449
BspPI GGATC 7 cut(s) 493, 974, 1958, 2030, 2126, 2139, 2501
BspT107I GGYRCC 1 cut(s) 1168
BspTI CTTAAG 1 cut(s) 302
BspTNI GGTCTC 3 cut(s) 1686, 1895, 2443
BsrBI CCGCTC 1 cut(s) 578
BsrDI GCAATG 1 cut(s) 2196
BsrGI TGTACA 1 cut(s) 1426
BssECI CCNNGG 7 cut(s) 20, 345, 706, 707, 1283, 2107, 2140
BssT1I CCWWGG 3 cut(s) 20, 1283, 2140
Bst2UI CCWGG 3 cut(s) 708, 1953, 2349
Bst4CI ACNGT 6 cut(s) 159, 233, 349, 1462, 1585, 2015
Bst6I CTCTTC 6 cut(s) 165, 202, 849, 1247, 1248, 1994
BstAFI CTTAAG 1 cut(s) 302
BstAPI GCANNNNNTGC 2 cut(s) 1346, 1355
BstAUI TGTACA 1 cut(s) 1426
BstBAI YACGTR 1 cut(s) 218
BstC8I GCNNGC 2 cut(s) 2187, 2554
BstDSI CCRYGG 1 cut(s) 345
BstF5I GGATG 6 cut(s) 208, 563, 882, 1015, 1808, 2289
BstFNI CGCG 1 cut(s) 2408
BstH2I RGCGCY 1 cut(s) 2474
BstHHI GCGC 3 cut(s) 625, 2201, 2473
BstMAI GTCTC 8 cut(s) 85, 165, 1249, 1298, 1686, 1895, 2238, 2443
BstMCI CGRYCG 2 cut(s) 235, 2424
BstMWI GCNNNNNNNGC 7 cut(s) 1346, 1355, 1364, 1769, 1877, 2174, 2376
BstNI CCWGG 3 cut(s) 708, 1953, 2349
BstSCI CCNGG 4 cut(s) 706, 1951, 2347, 2446
BstSFI CTRYAG 2 cut(s) 1461, 2011
BstSLI GKGCMC 1 cut(s) 661
BstSNI TACGTA 1 cut(s) 218
BstUI CGCG 1 cut(s) 2408
BstV1I GCAGC 8 cut(s) 622, 829, 1035, 1087, 1090, 1351, 1784, 1981
BstV2I GAAGAC 1 cut(s) 1065
BstX2I RGATCY 4 cut(s) 485, 1898, 2131, 2493
BstYI RGATCY 4 cut(s) 485, 1898, 2131, 2493
Bsu36I CCTNAGG 1 cut(s) 252
BsuI GTATCC 3 cut(s) 251, 1949, 2326
BsuRI GGCC 7 cut(s) 63, 344, 679, 1607, 1664, 1871, 2370
BtgI CCRYGG 1 cut(s) 345
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 6 cut(s) 208, 563, 882, 1015, 1808, 2289
BtsIMutI CAGTG 2 cut(s) 180, 661
BveI ACCTGC 1 cut(s) 1449
Cac8I GCNNGC 2 cut(s) 2187, 2554
CaiI CAGNNNCTG 1 cut(s) 488
CfoI GCGC 3 cut(s) 625, 2201, 2473
Cfr13I GGNCC 6 cut(s) 329, 342, 561, 711, 1663, 2368
CseI GACGC 1 cut(s) 2368
Csp6I GTAC 7 cut(s) 949, 1427, 1581, 1616, 1789, 1947, 2071
CspCI CAANNNNNGTGG 2 cut(s) 1204, 1239
CviQI GTAC 7 cut(s) 949, 1427, 1581, 1616, 1789, 1947, 2071
DraI TTTAAA 2 cut(s) 1017, 1065
EaeI YGGCCR 1 cut(s) 1605
Eam1104I CTCTTC 6 cut(s) 165, 202, 849, 1247, 1248, 1994
EarI CTCTTC 6 cut(s) 165, 202, 849, 1247, 1248, 1994
Ecl136II GAGCTC 1 cut(s) 104
Eco105I TACGTA 1 cut(s) 218
Eco130I CCWWGG 3 cut(s) 20, 1283, 2140
Eco24I GRGCYC 1 cut(s) 106
Eco31I GGTCTC 3 cut(s) 1686, 1895, 2443
Eco32I GATATC 1 cut(s) 1036
Eco47I GGWCC 3 cut(s) 329, 561, 711
Eco47III AGCGCT 1 cut(s) 2472
Eco53kI GAGCTC 1 cut(s) 104
Eco57I CTGAAG 1 cut(s) 666
Eco81I CCTNAGG 1 cut(s) 252
Eco88I CYCGRG 2 cut(s) 2278, 2295
EcoICRI GAGCTC 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 1663
EcoRI GAATTC 1 cut(s) 52
EcoRII CCWGG 3 cut(s) 706, 1951, 2347
EcoRV GATATC 1 cut(s) 1036
EcoT14I CCWWGG 3 cut(s) 20, 1283, 2140
EcoT22I ATGCAT 1 cut(s) 1808
EcoT38I GRGCYC 1 cut(s) 106
ErhI CCWWGG 3 cut(s) 20, 1283, 2140
FalI AAGNNNNNCTT 4 cut(s) 1042, 1074, 2247, 2279
FaqI GGGAC 4 cut(s) 675, 689, 724, 974
FauI CCCGC 2 cut(s) 900, 2138
FauNDI CATATG 1 cut(s) 535
FbaI TGATCA 2 cut(s) 1597, 2040
FblI GTMKAC 2 cut(s) 1753, 2010
Fnu4HI GCNGC 9 cut(s) 636, 818, 1024, 1101, 1104, 1365, 1773, 1995, 2393
FokI GGATG 6 cut(s) 215, 570, 869, 1022, 1815, 2296
FriOI GRGCYC 1 cut(s) 106
Fsp4HI GCNGC 9 cut(s) 636, 818, 1024, 1101, 1104, 1365, 1773, 1995, 2393
FspBI CTAG 7 cut(s) 77, 765, 1127, 1181, 1259, 1778, 1853
FspI TGCGCA 1 cut(s) 2200
GlaI GCGC 3 cut(s) 624, 2200, 2472
GluI GCNGC 9 cut(s) 636, 818, 1024, 1101, 1104, 1365, 1773, 1995, 2393
GsuI CTGGAG 4 cut(s) 1182, 1762, 2370, 2448
HaeII RGCGCY 1 cut(s) 2474
HaeIII GGCC 7 cut(s) 63, 344, 679, 1607, 1664, 1871, 2370
HapII CCGG 3 cut(s) 1172, 2447, 2516
HgaI GACGC 1 cut(s) 2368
HhaI GCGC 3 cut(s) 625, 2201, 2473
Hin6I GCGC 3 cut(s) 623, 2199, 2471
HinP1I GCGC 3 cut(s) 623, 2199, 2471
HincII GTYRAC 3 cut(s) 1419, 1436, 1632
HindII GTYRAC 3 cut(s) 1419, 1436, 1632
HindIII AAGCTT 1 cut(s) 2099
HpaII CCGG 3 cut(s) 1172, 2447, 2516
HphI GGTGA 3 cut(s) 1928, 2123, 2433
Hpy166II GTNNAC 9 cut(s) 589, 659, 1419, 1436, 1500, 1632, 1754, 2011, 2510
Hpy8I GTNNAC 9 cut(s) 589, 659, 1419, 1436, 1500, 1632, 1754, 2011, 2510
Hpy99I CGWCG 3 cut(s) 2422, 2492, 2508
HpyAV CCTTC 6 cut(s) 19, 690, 794, 1213, 1268, 2217
HpyCH4III ACNGT 6 cut(s) 159, 233, 349, 1462, 1585, 2015
HpyCH4IV ACGT 2 cut(s) 217, 918
HpyCH4V TGCA 7 cut(s) 358, 659, 817, 878, 1023, 1349, 1806
HpyF10VI GCNNNNNNNGC 7 cut(s) 1346, 1355, 1364, 1769, 1877, 2174, 2376
HpySE526I ACGT 2 cut(s) 217, 918
HspAI GCGC 3 cut(s) 623, 2199, 2471
Ksp22I TGATCA 2 cut(s) 1597, 2040
LmnI GCTCC 3 cut(s) 539, 613, 2351
Lsp1109I GCAGC 8 cut(s) 622, 829, 1035, 1087, 1090, 1351, 1784, 1981
LweI GCATC 3 cut(s) 610, 1358, 1793
MaeI CTAG 7 cut(s) 77, 765, 1127, 1181, 1259, 1778, 1853
MaeII ACGT 2 cut(s) 217, 918
MaeIII GTNAC 2 cut(s) 778, 1468
MbiI CCGCTC 1 cut(s) 578
MfeI CAATTG 1 cut(s) 1341
MflI RGATCY 4 cut(s) 485, 1898, 2131, 2493
MhlI GDGCHC 4 cut(s) 106, 661, 1454, 2179
MlyI GAGTC 6 cut(s) 135, 1551, 1928, 2150, 2287, 2535
MmeI TCCRAC 1 cut(s) 621
Mph1103I ATGCAT 1 cut(s) 1808
MroXI GAANNNNTTC 2 cut(s) 421, 1057
MseI TTAA 9 cut(s) 303, 369, 858, 1016, 1064, 1085, 1611, 2103, 2403
MslI CAYNNNNRTG 2 cut(s) 1520, 1827
MspCI CTTAAG 1 cut(s) 302
MspI CCGG 3 cut(s) 1172, 2447, 2516
MspR9I CCNGG 4 cut(s) 708, 1953, 2349, 2448
MunI CAATTG 1 cut(s) 1341
MvaI CCWGG 3 cut(s) 708, 1953, 2349
MvnI CGCG 1 cut(s) 2408
MwoI GCNNNNNNNGC 7 cut(s) 1346, 1355, 1364, 1769, 1877, 2174, 2376
NciI CCSGG 1 cut(s) 2448
NdeI CATATG 1 cut(s) 535
NlaIV GGNNCC 7 cut(s) 445, 541, 563, 712, 1170, 2133, 2346
NmuCI GTSAC 1 cut(s) 778
NsbI TGCGCA 1 cut(s) 2200
NsiI ATGCAT 1 cut(s) 1808
PaeR7I CTCGAG 2 cut(s) 2278, 2295
PaqCI CACCTGC 1 cut(s) 1449
PasI CCCWGGG 1 cut(s) 707
PdmI GAANNNNTTC 2 cut(s) 421, 1057
PfeI GAWTC 9 cut(s) 120, 237, 451, 953, 963, 1301, 1387, 1928, 2410
PflMI CCANNNNNTGG 1 cut(s) 2141
PfoI TCCNGGA 2 cut(s) 1951, 2347
PkrI GCNGC 9 cut(s) 637, 819, 1025, 1102, 1105, 1366, 1774, 1996, 2394
Ple19I CGATCG 1 cut(s) 2424
PleI GAGTC 6 cut(s) 135, 1550, 1927, 2150, 2287, 2535
PpsI GAGTC 6 cut(s) 135, 1550, 1927, 2150, 2287, 2535
Ppu21I YACGTR 1 cut(s) 218
Psp124BI GAGCTC 1 cut(s) 106
Psp6I CCWGG 3 cut(s) 706, 1951, 2347
PspGI CCWGG 3 cut(s) 706, 1951, 2347
PspN4I GGNNCC 7 cut(s) 445, 541, 563, 712, 1170, 2133, 2346
PspPI GGNCC 6 cut(s) 329, 342, 561, 711, 1663, 2368
PspXI VCTCGAGB 2 cut(s) 2278, 2295
PstNI CAGNNNCTG 1 cut(s) 488
PsuI RGATCY 4 cut(s) 485, 1898, 2131, 2493
PvuI CGATCG 1 cut(s) 2424
RsaI GTAC 7 cut(s) 950, 1428, 1582, 1617, 1790, 1948, 2072
RsaNI GTAC 7 cut(s) 949, 1427, 1581, 1616, 1789, 1947, 2071
RseI CAYNNNNRTG 2 cut(s) 1520, 1827
SacI GAGCTC 1 cut(s) 106
SaqAI TTAA 9 cut(s) 303, 369, 858, 1016, 1064, 1085, 1611, 2103, 2403
SatI GCNGC 9 cut(s) 636, 818, 1024, 1101, 1104, 1365, 1773, 1995, 2393
Sau96I GGNCC 6 cut(s) 329, 342, 561, 711, 1663, 2368
ScaI AGTACT 2 cut(s) 1617, 1790
SchI GAGTC 6 cut(s) 135, 1551, 1928, 2150, 2287, 2535
ScrFI CCNGG 4 cut(s) 708, 1953, 2349, 2448
SduI GDGCHC 4 cut(s) 106, 661, 1454, 2179
SfaNI GCATC 3 cut(s) 610, 1358, 1793
SfcI CTRYAG 2 cut(s) 1461, 2011
Sfr274I CTCGAG 2 cut(s) 2278, 2295
SinI GGWCC 3 cut(s) 329, 561, 711
SlaI CTCGAG 2 cut(s) 2278, 2295
SmiMI CAYNNNNRTG 2 cut(s) 1520, 1827
SmlI CTYRAG 7 cut(s) 105, 302, 1635, 1894, 2180, 2278, 2295
SmoI CTYRAG 7 cut(s) 105, 302, 1635, 1894, 2180, 2278, 2295
SnaBI TACGTA 1 cut(s) 218
SpeI ACTAGT 1 cut(s) 764
SsiI CCGC 9 cut(s) 138, 190, 390, 576, 893, 1811, 2145, 2392, 2444
SspI AATATT 3 cut(s) 718, 1973, 2323
SspMI CTAG 7 cut(s) 77, 765, 1127, 1181, 1259, 1778, 1853
SstI GAGCTC 1 cut(s) 106
StyD4I CCNGG 4 cut(s) 706, 1951, 2347, 2446
StyI CCWWGG 3 cut(s) 20, 1283, 2140
TaaI ACNGT 6 cut(s) 159, 233, 349, 1462, 1585, 2015
TaiI ACGT 2 cut(s) 220, 921
TatI WGTACW 3 cut(s) 1426, 1615, 1788
TauI GCSGC 1 cut(s) 2395
TfiI GAWTC 9 cut(s) 120, 237, 451, 953, 963, 1301, 1387, 1928, 2410
Tru1I TTAA 9 cut(s) 303, 369, 858, 1016, 1064, 1085, 1611, 2103, 2403
Tru9I TTAA 9 cut(s) 303, 369, 858, 1016, 1064, 1085, 1611, 2103, 2403
TscAI CASTG 2 cut(s) 187, 661
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 8 cut(s) 635, 817, 1023, 1100, 1103, 1364, 1772, 1994
Tsp45I GTSAC 1 cut(s) 778
TspGWI ACGGA 1 cut(s) 1046
TspRI CASTG 2 cut(s) 187, 661
Van91I CCANNNNNTGG 1 cut(s) 2141
Vha464I CTTAAG 1 cut(s) 302
VneI GTGCAC 1 cut(s) 657
VpaK11BI GGWCC 3 cut(s) 329, 561, 711
XapI RAATTY 3 cut(s) 52, 1329, 1861
XhoI CTCGAG 2 cut(s) 2278, 2295
XmiI GTMKAC 2 cut(s) 1753, 2010
XmnI GAANNNNTTC 2 cut(s) 421, 1057
XspI CTAG 7 cut(s) 77, 765, 1127, 1181, 1259, 1778, 1853
ZrmI AGTACT 2 cut(s) 1617, 1790
Zsp2I ATGCAT 1 cut(s) 1808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.