Rw2G034380

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
56588734 .. 56598563
9830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G034380.1

Sequence Viewer

Length: 2493 bp
ATGTGGCGGAGATTCAAGCAATTCTTCCTCTTTGCATTGCTTGGTTGTTTTGCTCTTAATCATGACCAAGTTCATGCTCAAGATGATCAATCAGGCTTCATTAGCATAGACTGTGGCCTACCAGAAAATTCAAGCTATACTGAAAAAGCAACCGGCATCTATTACATTTCAGATGCGATATTCACGGACACCGGTGAGAGTAAACTGGTATTGCATGACAACAGAGATAGTTATCAACATCCTTACGTGTCTTTTAGGAGTTTTCCCAATGGAACCAGGAACTGCTACATAATAAGCGTTGCAAACGGCACCAAATATTTGATCAGAGCCAGTTTTTACTATGGGAATTATGACGGTCAAAATGAGTTGCCAGAATTCGACCTACATCTTGGGCCTAATTACTGGGATACAGTGAGTTCTTACATTACCCACTCCGGAACTATATACATGTTTAATTGTCTGGTGAAGTCAAACAAAGGAATTCCATTTATATCAGCAATAGAGTTAAGGCCTTTACCTGATGAAAATTATAACGTAGGGGACTACTCCTTGGCACTAATCTGGCGATATGACATTGGTCAAACTGCTAAACAATACAGGTATCCAAGTGATCTTCATGATCGTCTATGGTATCCCTTTGACCGCGATGATTGGACGCAATTAAATACCTCATTAAGCAGCACTACCGAGGACAATAGTTACCAAGTTCCATCTATTGTCATGTGTACTGCTGCCACACCGAAAAATGCAGATGATTCCTTGAATATTTTCTGGCTACCTTCTGATAGCAATGCACAACAATTCAATATTACTTTTAATGGAGAGCCCTTTTATGGGCCCTCTTCTCCTGGATACATGTCCGCCACTACTATTTATAGCCGAGAGGCTTGGAGTCCAACAGGACAATATATAAATTTTTCCATCTTCAAGGATGAGAACTATACCCTACCACCTATCCTCAATGCTTATGAAATATATATGGTCAAGCCAGCTCCCCAATCAGCGACAAACCATGACGACATCGACGCGATCACAAACATCAAGTCAACTTATAAAATTACAAGAAACTGGCAAGGAGATCCATGTGCCCCCCAAAACTACTCTTGGGAAGGCTTGAAGTGTAGCTATCCCGAAGACTTCCCAAGAACAATATCCTTGGACTTGTCCTCAAGTGGAATAACAGGGGAGATATCTCTTTCTATATCCAATCTCACAATGATAAAAGACTTTGTAAGTATACATGCATGCCTTCCTGTAGATTTATCAAACAACAACTTGAGAGGATCAATTCCAGAGTTTTTGTCTCAGTTACCAGAATTAGAAGTTTTAAATTTGGAGAAGAACAACTTCACTGGTTTAGTTCCATCAAGACTCATTGAGAGAAGGAACAGCGGCTCACTACTGTTAAGTTTGTGTGAAAATCCATATCTATCCATACAAGTTTCTTGCAAGAAGCAGAAGAAGAAGCACAATGTTGTCTTAGTCGTAGTGCCAATTCTTGTAATTTTCATCCTTTTATTGACTATAGGAGCTGTCCTATTGGGCCTTAAAGTGAAAAGAAAACCTGAGATCCAGAATTCTATTCAGAGCTGGCCATTGGAGTCAGAGGATCGACGCTTTACATACTCAGAGCTTTTGAAGATTACTAATAATTTTGCATCAATCATCGGAAGAGGCGGATTCGGAAGAGTCTACCATGGCACTCTAAAAAATGATATTCAAGTCGCTGTGAAGTTACTGACTTCTTCTTCCAGGCAAGGCTCAAAAGAATTCCAAAATGAGGTTAAACTATTGATGACAGCTCATCATCGAAACTTGGTTTCTCTCATTGGTTACTGCAATGAAGGTGACACTATGGCACTTGCTTTTGAGTATGTAGCCAATGGAAATTTGCAGCAACATTTATCAGATCTAACATTGGACTTTTTGACTTGGAAGGAAAGACTTCAAATTGCCGTGGATGCAGCACGAGGGTTGGATTATCTACATAATGGTTGCAAGCCACCTATAGTCCATAGAGATCTGAAGGCTTCCAATTTCTTGTTAAATGAAAAGTTGCAAGCCAAGATAGCTGATTTTGGTCTTTCTAAAGTTCTTGCAACTGAAAGCGCCACTCATATATCAACTGATGCCAAAGGAACATTCGGGTACCTTGATGCTAAATATTGCAATACAGGACAGCTCAACAAAAAGAGTGATGTATACAGCTTTGGGATTGTGTTGCTAGAGCTAATAACCGGTAGAGCAGCCATAATAATAGATGTAGAACCTTTTCCTATTCACATATGTCAATGGGTGACTCCTATATATGAGAACATGGAAATTGAAAAGATAGTTGATTCAAGAATACAGGGTACCTACAACAATTTTTCTGCTCAGAAAGCTATAGAAATCGCCATGGCATGTGTGCGTTCATCAGCAATCCAAAGGCCAGAAATAAGCTCTGTATATGTTGAATTGAAGGGATGTTTGGAAATTGAGATTGACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

830

Amino Acids

93.72

Weight (kDa)

5.64

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 36 - 266 6e-74 Malectin-like domain
Malectin_like PF12819 263 - 328 5.4e-10 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 553 - 819 1.5e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 554 - 764 6.2e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 531, 1053
Acc65I GGTACC 2 cut(s) 2148, 2354
AccB1I GGYRCC 3 cut(s) 308, 2148, 2354
AccI GTMKAC 3 cut(s) 1237, 1692, 2202
AccII CGCG 2 cut(s) 645, 1028
AccIII TCCGGA 1 cut(s) 434
AciI CCGC 5 cut(s) 7, 643, 861, 1392, 1677
AclWI GGATC 4 cut(s) 1073, 1291, 1564, 1617
AcoI YGGCCR 1 cut(s) 1592
AcsI RAATTY 8 cut(s) 127, 374, 480, 913, 1330, 1576, 1769, 1888
AcuI CTGAAG 1 cut(s) 2045
AfaI GTAC 3 cut(s) 727, 2150, 2356
AfiI CCNNNNNNNGG 3 cut(s) 833, 834, 1780
AflIII ACRYGT 3 cut(s) 246, 447, 855
AgeI ACCGGT 2 cut(s) 191, 2237
AjnI CCWGG 3 cut(s) 275, 847, 1751
AjuI GAANNNNNNNTTGG 4 cut(s) 2126, 2158, 2453, 2485
Alw26I GTCTC 1 cut(s) 1308
AlwI GGATC 4 cut(s) 1073, 1291, 1564, 1617
AlwNI CAGNNNCTG 1 cut(s) 282
Aor13HI TCCGGA 1 cut(s) 434
AoxI GGCC 7 cut(s) 115, 392, 509, 836, 1543, 1592, 2429
ApaI GGGCCC 1 cut(s) 840
ApeKI GCWGC 5 cut(s) 678, 731, 1894, 1964, 2246
ApoI RAATTY 8 cut(s) 127, 374, 480, 913, 1330, 1576, 1769, 1888
ArsI GACNNNNNNTTYG 2 cut(s) 1028, 1060
AsiGI ACCGGT 2 cut(s) 191, 2237
Asp700I GAANNNNTTC 4 cut(s) 767, 1346, 1944, 2271
Asp718I GGTACC 2 cut(s) 2148, 2354
AspLEI GCGC 1 cut(s) 2111
AspS9I GGNCC 4 cut(s) 392, 836, 837, 1543
AsuHPI GGTGA 4 cut(s) 206, 475, 1859, 2308
BaeGI GKGCMC 2 cut(s) 840, 1090
BalI TGGCCA 1 cut(s) 1594
BanI GGYRCC 3 cut(s) 308, 2148, 2354
BanII GRGCYC 2 cut(s) 828, 840
BauI CACGAG 1 cut(s) 1968
BbsI GAAGAC 1 cut(s) 1140
BbvI GCAGC 5 cut(s) 690, 718, 1906, 1976, 2258
BccI CCATC 3 cut(s) 718, 929, 1372
BceAI ACGGC 2 cut(s) 322, 1940
BciT130I CCWGG 3 cut(s) 277, 849, 1753
BciVI GTATCC 4 cut(s) 400, 612, 642, 845
BclI TGATCA 2 cut(s) 85, 321
BcoDI GTCTC 1 cut(s) 1308
BfaI CTAG 1 cut(s) 2225
BfmI CTRYAG 4 cut(s) 1254, 1524, 2007, 2385
BfoI RGCGCY 1 cut(s) 2112
BfuI GTATCC 4 cut(s) 400, 612, 642, 845
BglII AGATCT 2 cut(s) 1909, 2020
BisI GCNGC 6 cut(s) 679, 732, 1393, 1895, 1965, 2247
BlsI GCNGC 6 cut(s) 680, 733, 1394, 1896, 1966, 2248
Bme1390I CCNGG 3 cut(s) 277, 849, 1753
BmgT120I GGNCC 4 cut(s) 392, 836, 837, 1543
BmiI GGNNCC 5 cut(s) 274, 310, 838, 2150, 2356
BmrFI CCNGG 3 cut(s) 277, 849, 1753
BmrI ACTGGG 1 cut(s) 412
BmsI GCATC 6 cut(s) 163, 165, 1667, 1951, 2119, 2146
BmuI ACTGGG 1 cut(s) 412
BoxI GACNNNNGTC 1 cut(s) 576
BpiI GAAGAC 1 cut(s) 1140
BpuEI CTTGAG 3 cut(s) 63, 1153, 1297
BsaAI YACGTR 1 cut(s) 247
BsaBI GATNNNNATC 1 cut(s) 231
BsaJI CCNNGG 6 cut(s) 549, 687, 1155, 1696, 1956, 2397
BsaWI WCCGGW 3 cut(s) 191, 434, 2237
Bsc4I CCNNNNNNNGG 3 cut(s) 833, 834, 1780
Bse118I RCCGGY 3 cut(s) 152, 191, 2237
Bse1I ACTGG 5 cut(s) 210, 330, 407, 1073, 1357
Bse3DI GCAATG 3 cut(s) 35, 796, 1846
Bse8I GATNNNNATC 1 cut(s) 231
BseAI TCCGGA 1 cut(s) 434
BseBI CCWGG 3 cut(s) 277, 849, 1753
BseDI CCNNGG 6 cut(s) 549, 687, 1155, 1696, 1956, 2397
BseGI GGATG 5 cut(s) 238, 937, 1509, 1966, 2471
BseJI GATNNNNATC 1 cut(s) 231
BseLI CCNNNNNNNGG 3 cut(s) 833, 834, 1780
BseMI GCAATG 3 cut(s) 35, 796, 1846
BseMII CTCAG 4 cut(s) 1319, 1557, 1641, 2390
BseNI ACTGG 5 cut(s) 210, 330, 407, 1073, 1357
BseSI GKGCMC 2 cut(s) 840, 1090
BseXI GCAGC 5 cut(s) 690, 718, 1906, 1976, 2258
Bsh1236I CGCG 2 cut(s) 645, 1028
BshFI GGCC 7 cut(s) 117, 394, 511, 838, 1545, 1594, 2431
BshNI GGYRCC 3 cut(s) 308, 2148, 2354
BshTI ACCGGT 2 cut(s) 191, 2237
BsiSI CCGG 4 cut(s) 153, 192, 435, 2238
BslFI GGGAC 1 cut(s) 554
BslI CCNNNNNNNGG 3 cut(s) 833, 834, 1780
BsmAI GTCTC 1 cut(s) 1308
BsmFI GGGAC 1 cut(s) 554
BsnI GGCC 7 cut(s) 117, 394, 511, 838, 1545, 1594, 2431
Bsp120I GGGCCC 1 cut(s) 836
Bsp1286I GDGCHC 3 cut(s) 828, 840, 1090
Bsp13I TCCGGA 1 cut(s) 434
Bsp19I CCATGG 2 cut(s) 1696, 2397
BspACI CCGC 5 cut(s) 7, 643, 861, 1392, 1677
BspANI GGCC 7 cut(s) 117, 394, 511, 838, 1545, 1594, 2431
BspCNI CTCAG 4 cut(s) 1318, 1558, 1640, 2389
BspEI TCCGGA 1 cut(s) 434
BspFNI CGCG 2 cut(s) 645, 1028
BspHI TCATGA 2 cut(s) 61, 616
BspLI GGNNCC 5 cut(s) 274, 310, 838, 2150, 2356
BspPI GGATC 4 cut(s) 1073, 1291, 1564, 1617
BspT107I GGYRCC 3 cut(s) 308, 2148, 2354
BsrDI GCAATG 3 cut(s) 35, 796, 1846
BsrFI RCCGGY 3 cut(s) 152, 191, 2237
BsrI ACTGG 5 cut(s) 210, 330, 407, 1073, 1357
BssAI RCCGGY 3 cut(s) 152, 191, 2237
BssECI CCNNGG 6 cut(s) 549, 687, 1155, 1696, 1956, 2397
BssNAI GTATAC 2 cut(s) 1238, 2203
BssSI CACGAG 1 cut(s) 1968
BssT1I CCWWGG 4 cut(s) 549, 1155, 1696, 2397
Bst1107I GTATAC 2 cut(s) 1238, 2203
Bst2BI CACGAG 1 cut(s) 1968
Bst2UI CCWGG 3 cut(s) 277, 849, 1753
Bst4CI ACNGT 4 cut(s) 113, 356, 412, 1404
Bst6I CTCTTC 3 cut(s) 847, 1666, 1681
BstBAI YACGTR 1 cut(s) 247
BstC8I GCNNGC 5 cut(s) 990, 1246, 1592, 2000, 2061
BstDEI CTNAG 5 cut(s) 1305, 1480, 1566, 1627, 2376
BstDSI CCRYGG 3 cut(s) 1696, 1956, 2397
BstF5I GGATG 5 cut(s) 238, 937, 1509, 1966, 2471
BstFNI CGCG 2 cut(s) 645, 1028
BstH2I RGCGCY 1 cut(s) 2112
BstHHI GCGC 1 cut(s) 2111
BstMAI GTCTC 1 cut(s) 1308
BstMWI GCNNNNNNNGC 4 cut(s) 102, 1961, 2069, 2381
BstNI CCWGG 3 cut(s) 277, 849, 1753
BstNSI RCATGY 5 cut(s) 451, 859, 1244, 1248, 2406
BstPAI GACNNNNGTC 1 cut(s) 576
BstSCI CCNGG 3 cut(s) 275, 847, 1751
BstSFI CTRYAG 4 cut(s) 1254, 1524, 2007, 2385
BstSLI GKGCMC 2 cut(s) 840, 1090
BstUI CGCG 2 cut(s) 645, 1028
BstV1I GCAGC 5 cut(s) 690, 718, 1906, 1976, 2258
BstV2I GAAGAC 1 cut(s) 1140
BstX2I RGATCY 4 cut(s) 1078, 1569, 1909, 2020
BstYI RGATCY 4 cut(s) 1078, 1569, 1909, 2020
BstZ17I GTATAC 2 cut(s) 1238, 2203
BsuI GTATCC 4 cut(s) 400, 612, 642, 845
BsuRI GGCC 7 cut(s) 117, 394, 511, 838, 1545, 1594, 2431
BtgI CCRYGG 3 cut(s) 1696, 1956, 2397
BtgZI GCGATG 1 cut(s) 660
BtsCI GGATG 5 cut(s) 238, 937, 1509, 1966, 2471
BtsIMutI CAGTG 2 cut(s) 417, 1350
Cac8I GCNNGC 5 cut(s) 990, 1246, 1592, 2000, 2061
CaiI CAGNNNCTG 1 cut(s) 282
CciI TCATGA 2 cut(s) 61, 616
CfoI GCGC 1 cut(s) 2111
Cfr10I RCCGGY 3 cut(s) 152, 191, 2237
Cfr13I GGNCC 4 cut(s) 392, 836, 837, 1543
CseI GACGC 3 cut(s) 664, 1034, 1623
Csp6I GTAC 3 cut(s) 726, 2149, 2355
CspAI ACCGGT 2 cut(s) 191, 2237
CviQI GTAC 3 cut(s) 726, 2149, 2355
DdeI CTNAG 5 cut(s) 1305, 1480, 1566, 1627, 2376
DraI TTTAAA 1 cut(s) 1329
EaeI YGGCCR 1 cut(s) 1592
Eam1104I CTCTTC 3 cut(s) 847, 1666, 1681
EarI CTCTTC 3 cut(s) 847, 1666, 1681
EciI GGCGGA 3 cut(s) 22, 850, 1692
Eco130I CCWWGG 4 cut(s) 549, 1155, 1696, 2397
Eco147I AGGCCT 1 cut(s) 511
Eco24I GRGCYC 2 cut(s) 828, 840
Eco32I GATATC 1 cut(s) 1191
Eco57I CTGAAG 1 cut(s) 2045
EcoO109I RGGNCCY 1 cut(s) 837
EcoRI GAATTC 4 cut(s) 374, 480, 1576, 1769
EcoRII CCWGG 3 cut(s) 275, 847, 1751
EcoRV GATATC 1 cut(s) 1191
EcoT14I CCWWGG 4 cut(s) 549, 1155, 1696, 2397
EcoT22I ATGCAT 1 cut(s) 1246
EcoT38I GRGCYC 2 cut(s) 828, 840
ErhI CCWWGG 4 cut(s) 549, 1155, 1696, 2397
FalI AAGNNNNNCTT 4 cut(s) 8, 40, 1331, 1363
FaqI GGGAC 1 cut(s) 554
FauNDI CATATG 1 cut(s) 2285
FbaI TGATCA 2 cut(s) 85, 321
FblI GTMKAC 3 cut(s) 1237, 1692, 2202
Fnu4HI GCNGC 6 cut(s) 679, 732, 1393, 1895, 1965, 2247
FokI GGATG 5 cut(s) 225, 944, 1496, 1973, 2478
FriOI GRGCYC 2 cut(s) 828, 840
Fsp4HI GCNGC 6 cut(s) 679, 732, 1393, 1895, 1965, 2247
FspBI CTAG 1 cut(s) 2225
GlaI GCGC 1 cut(s) 2110
GluI GCNGC 6 cut(s) 679, 732, 1393, 1895, 1965, 2247
HaeII RGCGCY 1 cut(s) 2112
HaeIII GGCC 7 cut(s) 117, 394, 511, 838, 1545, 1594, 2431
HapII CCGG 4 cut(s) 153, 192, 435, 2238
HgaI GACGC 3 cut(s) 664, 1034, 1623
HhaI GCGC 1 cut(s) 2111
Hin6I GCGC 1 cut(s) 2109
HinP1I GCGC 1 cut(s) 2109
HincII GTYRAC 1 cut(s) 1047
HindII GTYRAC 1 cut(s) 1047
HinfI GANTC 9 cut(s) 12, 755, 892, 1371, 1601, 1680, 1689, 2299, 2339
HpaII CCGG 4 cut(s) 153, 192, 435, 2238
HphI GGTGA 4 cut(s) 206, 475, 1859, 2308
Hpy166II GTNNAC 6 cut(s) 203, 726, 1047, 1238, 1693, 2203
Hpy188III TCNNGA 9 cut(s) 62, 80, 435, 617, 1130, 1292, 1368, 1573, 2343
Hpy8I GTNNAC 6 cut(s) 203, 726, 1047, 1238, 1693, 2203
Hpy99I CGWCG 2 cut(s) 1028, 1617
HpyAV CCTTC 8 cut(s) 789, 1103, 1259, 1377, 1838, 1930, 2020, 2455
HpyCH4III ACNGT 4 cut(s) 113, 356, 412, 1404
HpyCH4IV ACGT 2 cut(s) 246, 534
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 1961, 2069, 2381
HpyF3I CTNAG 5 cut(s) 1305, 1480, 1566, 1627, 2376
HpySE526I ACGT 2 cut(s) 246, 534
HspAI GCGC 1 cut(s) 2109
Kpn2I TCCGGA 1 cut(s) 434
KpnI GGTACC 2 cut(s) 2152, 2358
Ksp22I TGATCA 2 cut(s) 85, 321
LmnI GCTCC 2 cut(s) 997, 1529
Lsp1109I GCAGC 5 cut(s) 690, 718, 1906, 1976, 2258
LweI GCATC 6 cut(s) 163, 165, 1667, 1951, 2119, 2146
MaeI CTAG 1 cut(s) 2225
MaeII ACGT 2 cut(s) 246, 534
MaeIII GTNAC 6 cut(s) 698, 1308, 1734, 1832, 1847, 2296
MflI RGATCY 4 cut(s) 1078, 1569, 1909, 2020
MhlI GDGCHC 3 cut(s) 828, 840, 1090
MlsI TGGCCA 1 cut(s) 1594
MluNI TGGCCA 1 cut(s) 1594
MlyI GAGTC 5 cut(s) 901, 1365, 1610, 1698, 2293
MmeI TCCRAC 2 cut(s) 920, 1956
Mox20I TGGCCA 1 cut(s) 1594
Mph1103I ATGCAT 1 cut(s) 1246
MroI TCCGGA 1 cut(s) 434
MroXI GAANNNNTTC 4 cut(s) 767, 1346, 1944, 2271
MscI TGGCCA 1 cut(s) 1594
Msp20I TGGCCA 1 cut(s) 1594
MspA1I CMGCKG 1 cut(s) 1392
MspI CCGG 4 cut(s) 153, 192, 435, 2238
MspR9I CCNGG 3 cut(s) 277, 849, 1753
MvaI CCWGG 3 cut(s) 277, 849, 1753
MvnI CGCG 2 cut(s) 645, 1028
MwoI GCNNNNNNNGC 4 cut(s) 102, 1961, 2069, 2381
NcoI CCATGG 2 cut(s) 1696, 2397
NdeI CATATG 1 cut(s) 2285
NlaIV GGNNCC 5 cut(s) 274, 310, 838, 2150, 2356
NmeAIII GCCGAG 1 cut(s) 905
NmuCI GTSAC 2 cut(s) 1847, 2296
NsiI ATGCAT 1 cut(s) 1246
NspI RCATGY 5 cut(s) 451, 859, 1244, 1248, 2406
PaeI GCATGC 1 cut(s) 1248
PagI TCATGA 2 cut(s) 61, 616
PceI AGGCCT 1 cut(s) 511
PciI ACATGT 2 cut(s) 447, 855
PdmI GAANNNNTTC 4 cut(s) 767, 1346, 1944, 2271
PfeI GAWTC 4 cut(s) 12, 755, 1680, 2339
PfoI TCCNGGA 1 cut(s) 847
PinAI ACCGGT 2 cut(s) 191, 2237
PkrI GCNGC 6 cut(s) 680, 733, 1394, 1896, 1966, 2248
PleI GAGTC 5 cut(s) 900, 1365, 1609, 1697, 2293
PpsI GAGTC 5 cut(s) 900, 1365, 1609, 1697, 2293
Ppu21I YACGTR 1 cut(s) 247
PscI ACATGT 2 cut(s) 447, 855
PshAI GACNNNNGTC 1 cut(s) 576
PsiI TTATAA 2 cut(s) 531, 1053
Psp6I CCWGG 3 cut(s) 275, 847, 1751
PspGI CCWGG 3 cut(s) 275, 847, 1751
PspN4I GGNNCC 5 cut(s) 274, 310, 838, 2150, 2356
PspOMI GGGCCC 1 cut(s) 836
PspPI GGNCC 4 cut(s) 392, 836, 837, 1543
PstNI CAGNNNCTG 1 cut(s) 282
PsuI RGATCY 4 cut(s) 1078, 1569, 1909, 2020
RsaI GTAC 3 cut(s) 727, 2150, 2356
RsaNI GTAC 3 cut(s) 726, 2149, 2355
SatI GCNGC 6 cut(s) 679, 732, 1393, 1895, 1965, 2247
Sau96I GGNCC 4 cut(s) 392, 836, 837, 1543
SchI GAGTC 5 cut(s) 901, 1365, 1610, 1698, 2293
ScrFI CCNGG 3 cut(s) 277, 849, 1753
SduI GDGCHC 3 cut(s) 828, 840, 1090
SfaNI GCATC 6 cut(s) 163, 165, 1667, 1951, 2119, 2146
SfcI CTRYAG 4 cut(s) 1254, 1524, 2007, 2385
SgrAI CRCCGGYG 1 cut(s) 191
SmlI CTYRAG 3 cut(s) 78, 1168, 1276
SmoI CTYRAG 3 cut(s) 78, 1168, 1276
SphI GCATGC 1 cut(s) 1248
SseBI AGGCCT 1 cut(s) 511
SsiI CCGC 5 cut(s) 7, 643, 861, 1392, 1677
SspI AATATT 4 cut(s) 317, 766, 808, 2165
SspMI CTAG 1 cut(s) 2225
StuI AGGCCT 1 cut(s) 511
StyD4I CCNGG 3 cut(s) 275, 847, 1751
StyI CCWWGG 4 cut(s) 549, 1155, 1696, 2397
TaaI ACNGT 4 cut(s) 113, 356, 412, 1404
TaiI ACGT 2 cut(s) 249, 537
TaqI TCGA 4 cut(s) 378, 1023, 1612, 1810
TatI WGTACW 1 cut(s) 725
TauI GCSGC 1 cut(s) 1395
TfiI GAWTC 4 cut(s) 12, 755, 1680, 2339
TscAI CASTG 2 cut(s) 417, 1357
TseFI GTSAC 2 cut(s) 1847, 2296
TseI GCWGC 5 cut(s) 678, 731, 1894, 1964, 2246
Tsp45I GTSAC 2 cut(s) 1847, 2296
TspDTI ATGAA 9 cut(s) 62, 88, 537, 605, 984, 1498, 1857, 2064, 2403
TspGWI ACGGA 1 cut(s) 200
TspRI CASTG 2 cut(s) 417, 1357
XapI RAATTY 8 cut(s) 127, 374, 480, 913, 1330, 1576, 1769, 1888
XceI RCATGY 5 cut(s) 451, 859, 1244, 1248, 2406
XmiI GTMKAC 3 cut(s) 1237, 1692, 2202
XmnI GAANNNNTTC 4 cut(s) 767, 1346, 1944, 2271
XspI CTAG 1 cut(s) 2225
Zsp2I ATGCAT 1 cut(s) 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.