Rmu_sc0000712.1_g000003

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000712.1
Physical Location & Seq
Forward (+)
12359 .. 14400
2042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000712.1_g000003.1.cds

Sequence Viewer

Length: 747 bp
atgttcatgcaattccctttggcacttgtcggtgctttctctgtgatgatgctcctagttcatgccctgcaggatggatcagacttcattagcatagattgtggcctacaacaaaattcggactatacagaaagcacaacaaccataagatacgttccagacacaaatttcattgatactggtgagggcaagaccgtatcacgtgagtataactttcagcaacagttttggttcgttaggatcttccctgaaggaaccaggaactgttacaaaataaacattaaaagcgggcaaaagtatttgatccgagcaagctttgggtatggaaattatgatggggaaaacaacttacctgaattcgaactgcatcttggaactagtttgtgggattctgtggtgattactagtgtgaatactatcataactaaggaggtcatacatatcccgacgcgaaattacatacatgtttgtatggttgacataaataaaggagttccatttatatcgactatagaactcaggcgtttacgtgatgagagttatcaaacagaagttgggtctttggcacttgttaagcgacgaaacatggcagcgaatcacaccatatacagagagtgtaattcagtggctgatttgttagcaaatattggacatgtttatgagcctggctgtagattttttagcgcccctcctgctgatgtcgtgcttcttttggaagctgatctattgggcttggggcttgtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

248

Amino Acids

28.02

Weight (kDa)

5.36

Isoelectric Point (pI)

38.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 451
AciI CCGC 1 cut(s) 288
AclWI GGATC 3 cut(s) 85, 248, 298
AcsI RAATTY 3 cut(s) 115, 166, 356
AcuI CTGAAG 1 cut(s) 270
AcvI CACGTG 1 cut(s) 203
AflIII ACRYGT 2 cut(s) 463, 652
AhlI ACTAGT 2 cut(s) 377, 404
AjnI CCWGG 2 cut(s) 257, 664
AjuI GAANNNNNNNTTGG 2 cut(s) 354, 386
AluBI AGCT 2 cut(s) 315, 719
AluI AGCT 2 cut(s) 315, 719
AlwI GGATC 3 cut(s) 85, 248, 298
AlwNI CAGNNNCTG 2 cut(s) 264, 629
AoxI GGCC 1 cut(s) 103
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 3 cut(s) 115, 166, 356
AspLEI GCGC 1 cut(s) 686
AsuHPI GGTGA 2 cut(s) 194, 409
AsuII TTCGAA 1 cut(s) 360
BbrPI CACGTG 1 cut(s) 203
BbvI GCAGC 1 cut(s) 602
BccI CCATC 2 cut(s) 68, 329
BciT130I CCWGG 2 cut(s) 259, 666
BcuI ACTAGT 2 cut(s) 377, 404
BfaI CTAG 3 cut(s) 56, 378, 405
BfmI CTRYAG 3 cut(s) 68, 510, 670
BfoI RGCGCY 1 cut(s) 687
BisI GCNGC 1 cut(s) 591
BlsI GCNGC 1 cut(s) 592
Bme1390I CCNGG 2 cut(s) 259, 666
BmiI GGNNCC 1 cut(s) 256
BmrFI CCNGG 2 cut(s) 259, 666
BmsI GCATC 2 cut(s) 39, 376
Bpu14I TTCGAA 1 cut(s) 360
BsaAI YACGTR 2 cut(s) 203, 530
Bse1I ACTGG 1 cut(s) 184
BseBI CCWGG 2 cut(s) 259, 666
BseGI GGATG 1 cut(s) 79
BseMII CTCAG 1 cut(s) 532
BseNI ACTGG 1 cut(s) 184
BseXI GCAGC 1 cut(s) 602
Bsh1236I CGCG 1 cut(s) 451
BshFI GGCC 1 cut(s) 105
BsnI GGCC 1 cut(s) 105
Bsp119I TTCGAA 1 cut(s) 360
Bsp143I GATC 4 cut(s) 77, 240, 303, 721
BspACI CCGC 1 cut(s) 288
BspANI GGCC 1 cut(s) 105
BspCNI CTCAG 1 cut(s) 531
BspFNI CGCG 1 cut(s) 451
BspLI GGNNCC 1 cut(s) 256
BspMAI CTGCAG 1 cut(s) 72
BspPI GGATC 3 cut(s) 85, 248, 298
BspT104I TTCGAA 1 cut(s) 360
BsrI ACTGG 1 cut(s) 184
BssMI GATC 4 cut(s) 77, 240, 303, 721
Bst2UI CCWGG 2 cut(s) 259, 666
Bst4CI ACNGT 3 cut(s) 196, 225, 266
BstBAI YACGTR 2 cut(s) 203, 530
BstBI TTCGAA 1 cut(s) 360
BstC8I GCNNGC 2 cut(s) 290, 313
BstDEI CTNAG 2 cut(s) 426, 518
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 1 cut(s) 451
BstH2I RGCGCY 1 cut(s) 687
BstHHI GCGC 1 cut(s) 686
BstKTI GATC 4 cut(s) 80, 243, 306, 724
BstMBI GATC 4 cut(s) 77, 240, 303, 721
BstMWI GCNNNNNNNGC 1 cut(s) 692
BstNI CCWGG 2 cut(s) 259, 666
BstNSI RCATGY 2 cut(s) 467, 656
BstSCI CCNGG 2 cut(s) 257, 664
BstSFI CTRYAG 3 cut(s) 68, 510, 670
BstUI CGCG 1 cut(s) 451
BstV1I GCAGC 1 cut(s) 602
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 1 cut(s) 105
BtsCI GGATG 1 cut(s) 79
BtsIMutI CAGTG 1 cut(s) 630
Cac8I GCNNGC 2 cut(s) 290, 313
CaiI CAGNNNCTG 2 cut(s) 264, 629
CfoI GCGC 1 cut(s) 686
CseI GACGC 1 cut(s) 457
CviAII CATG 5 cut(s) 7, 62, 464, 586, 653
CviJI RGCY 8 cut(s) 105, 315, 629, 664, 669, 719, 732, 739
CviKI_1 RGCY 8 cut(s) 105, 315, 629, 664, 669, 719, 732, 739
DdeI CTNAG 2 cut(s) 426, 518
DpnI GATC 4 cut(s) 79, 242, 305, 723
DpnII GATC 4 cut(s) 77, 240, 303, 721
Eco57I CTGAAG 1 cut(s) 270
Eco72I CACGTG 1 cut(s) 203
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 2 cut(s) 257, 664
FaeI CATG 5 cut(s) 10, 65, 467, 589, 656
FatI CATG 5 cut(s) 6, 61, 463, 585, 652
FauI CCCGC 1 cut(s) 281
Fnu4HI GCNGC 1 cut(s) 591
FokI GGATG 1 cut(s) 86
Fsp4HI GCNGC 1 cut(s) 591
FspBI CTAG 3 cut(s) 56, 378, 405
GlaI GCGC 1 cut(s) 685
GluI GCNGC 1 cut(s) 591
HaeII RGCGCY 1 cut(s) 687
HaeIII GGCC 1 cut(s) 105
HgaI GACGC 1 cut(s) 457
HhaI GCGC 1 cut(s) 686
Hin1II CATG 5 cut(s) 10, 65, 467, 589, 656
Hin6I GCGC 1 cut(s) 684
HinP1I GCGC 1 cut(s) 684
HincII GTYRAC 1 cut(s) 478
HindII GTYRAC 1 cut(s) 478
HindIII AAGCTT 1 cut(s) 313
HinfI GANTC 2 cut(s) 389, 595
HphI GGTGA 2 cut(s) 194, 409
Hpy166II GTNNAC 2 cut(s) 478, 527
Hpy188I TCNGA 3 cut(s) 82, 121, 308
Hpy188III TCNNGA 2 cut(s) 158, 445
Hpy8I GTNNAC 2 cut(s) 478, 527
Hpy99I CGWCG 2 cut(s) 451, 582
HpyAV CCTTC 1 cut(s) 245
HpyCH4III ACNGT 3 cut(s) 196, 225, 266
HpyCH4IV ACGT 3 cut(s) 153, 202, 529
HpyCH4V TGCA 3 cut(s) 10, 70, 367
HpyF10VI GCNNNNNNNGC 1 cut(s) 692
HpyF3I CTNAG 2 cut(s) 426, 518
HpySE526I ACGT 3 cut(s) 153, 202, 529
Hsp92II CATG 5 cut(s) 10, 65, 467, 589, 656
HspAI GCGC 1 cut(s) 684
Kzo9I GATC 4 cut(s) 77, 240, 303, 721
LmnI GCTCC 1 cut(s) 57
Lsp1109I GCAGC 1 cut(s) 602
LweI GCATC 2 cut(s) 39, 376
MaeI CTAG 3 cut(s) 56, 378, 405
MaeII ACGT 3 cut(s) 153, 202, 529
MaeIII GTNAC 1 cut(s) 266
MalI GATC 4 cut(s) 79, 242, 305, 723
MboI GATC 4 cut(s) 77, 240, 303, 721
MboII GAAGA 1 cut(s) 235
MflI RGATCY 1 cut(s) 240
MluCI AATT 7 cut(s) 11, 115, 166, 328, 356, 454, 619
MnlI CCTC 3 cut(s) 178, 424, 699
MseI TTAA 2 cut(s) 282, 573
MslI CAYNNNNRTG 1 cut(s) 657
MspR9I CCNGG 2 cut(s) 259, 666
MvaI CCWGG 2 cut(s) 259, 666
MvnI CGCG 1 cut(s) 451
MwoI GCNNNNNNNGC 1 cut(s) 692
NdeII GATC 4 cut(s) 77, 240, 303, 721
NlaIII CATG 5 cut(s) 10, 65, 467, 589, 656
NlaIV GGNNCC 1 cut(s) 256
NspI RCATGY 2 cut(s) 467, 656
NspV TTCGAA 1 cut(s) 360
PciI ACATGT 2 cut(s) 463, 652
PfeI GAWTC 2 cut(s) 389, 595
PkrI GCNGC 1 cut(s) 592
PmaCI CACGTG 1 cut(s) 203
PmlI CACGTG 1 cut(s) 203
Ppu21I YACGTR 2 cut(s) 203, 530
PscI ACATGT 2 cut(s) 463, 652
Psp6I CCWGG 2 cut(s) 257, 664
PspCI CACGTG 1 cut(s) 203
PspGI CCWGG 2 cut(s) 257, 664
PspN4I GGNNCC 1 cut(s) 256
PstI CTGCAG 1 cut(s) 72
PstNI CAGNNNCTG 2 cut(s) 264, 629
PsuI RGATCY 1 cut(s) 240
RseI CAYNNNNRTG 1 cut(s) 657
SaqAI TTAA 2 cut(s) 282, 573
SatI GCNGC 1 cut(s) 591
Sau3AI GATC 4 cut(s) 77, 240, 303, 721
SbfI CCTGCAGG 1 cut(s) 72
ScrFI CCNGG 2 cut(s) 259, 666
SdaI CCTGCAGG 1 cut(s) 72
SetI ASST 7 cut(s) 156, 205, 317, 355, 435, 532, 721
SfaNI GCATC 2 cut(s) 39, 376
SfcI CTRYAG 3 cut(s) 68, 510, 670
SfuI TTCGAA 1 cut(s) 360
SmiMI CAYNNNNRTG 1 cut(s) 657
SpeI ACTAGT 2 cut(s) 377, 404
Sse8387I CCTGCAGG 1 cut(s) 72
Sse9I AATT 7 cut(s) 11, 115, 166, 328, 356, 454, 619
SsiI CCGC 1 cut(s) 288
SspI AATATT 1 cut(s) 646
SspMI CTAG 3 cut(s) 56, 378, 405
StyD4I CCNGG 2 cut(s) 257, 664
TaaI ACNGT 3 cut(s) 196, 225, 266
TaiI ACGT 3 cut(s) 156, 205, 532
TaqI TCGA 2 cut(s) 360, 506
TasI AATT 7 cut(s) 11, 115, 166, 328, 356, 454, 619
TfiI GAWTC 2 cut(s) 389, 595
Tru1I TTAA 2 cut(s) 282, 573
Tru9I TTAA 2 cut(s) 282, 573
TscAI CASTG 1 cut(s) 630
TseI GCWGC 1 cut(s) 590
TspDTI ATGAA 3 cut(s) 50, 76, 160
TspRI CASTG 1 cut(s) 630
XapI RAATTY 3 cut(s) 115, 166, 356
XceI RCATGY 2 cut(s) 467, 656
XspI CTAG 3 cut(s) 56, 378, 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.