RchiOBHm_Chr2g0123351

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000083
Physical Location & Seq
Forward (+)
36504244 .. 36506961
2718 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49565

Sequence Viewer

Length: 1695 bp
ATGAGTACTGCAGGCACTGCGATGAACTCTAGTACTCCCATGTATATCGGTTGGAATCCACCAGATACAACTTCTGAATACTATGTGTACATGCACTTTGCTGAAATCCAGAAGTTGAAAGCCAACGAGTCCAGATCCTTCAATATCACCCTGAATGACAAACTTTTTTATGGACCTCTAGTGCCAAGTTACTTGAGTACAATTACTATTTACAGCCCAGCAGCGTTAACAGGAGGAAATTTTACATTCTTACTCTTCAAAACTGAGAATTCAACACTGCCACCGATCCTCAATGCCATGGAGTACTTCAGAGTCATAGATTTCTTGCTTTTATATATGTTCATTTTTAGAGGCATCACCATGCTTTTAACTGACTGCTTTAACTTAGCTAGCTGTCAACATGATTCACTCATAAGTTGCTTGAAACTTGCTATTAGGGACTTGTCCTCGAGCGGCTTGACAGGAGAGATAACTTCATATATATCCAATCTTGACATGTTACAATCTTTGGATTTATCTAACAATAGCTTAACTGGATCAGTACCTGAGTTTCTGACTAAATTGCCAAACCTGAAAGTCCTTAACTTGGAAAAGAACAAGCTGAATGGTTCACTTCCAAGTATGCTTATCGAAAAATCGACAAGTGGTTCACTATCGTTAAGGGTCGGAGAAAATGAAAACTTATGTGCAGCAATTTCATGCAAAAAGAAGAAAAACAATGTATTCATTCCAATAATAGCAGCAGTTGGTGGATTTGCTATTCTGTTTGTAGCATCAGTTGTTATATTTTTTAGTATGAGAAGAAAAAGAAAACAAGTTGGAACAGCAGTGGCAGATTCCAACATTCAAATGGATTCATTAGAAAATTTCGAGTCCAAGAAGAGACAATTTACATACTCAGAGGTGCTGACAATTACTAACAACTTTCAGACAATTCTTGGGAAAGGTGGATTTGGACTGGTTTACCATGGCTATGTAGATGATACTCAAGTAGCTGTGAAAGTCAAACTTCTTATGAGAGTTCATCATAGAAACTTGACTGGCCTTGTTGGATATTGCAATGAAGGAACGAACATGGCTCTCCTCTACGAATACATGGCCAATGGAAATCTGGAATCGCATCTCTTGGGTGAAGATAGCAATGTAACTCTCTTGACTTGGGAAAGTCGACTTAGAATAGCGGCTGATGCAGCACAAGGACTGGAGTATCTTCACAATGGTTGTAAGCCACCTATTATCCACAGAGATGTGAAGACACCAAATATTTTGTTAGCCGAAAATTTCCAAGCAAAGTTGGCTGATTTTGGCCTATCCAGAATGTTCTCAACTGACGAAGGCACTCATATGTCAACAGCTGTTGCTGGCACCCCTGGATACCTTGACCCTGAGTACCACATAACAGGCTGGTTGAATGAGAAGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTGCAGATAATAACTAGCCGACCTGTGATATCAAGAACAGCCCAAGTGAATAGTCATGTAAGTCAATGGGTTAGCTCCATGCTTTCTAATGGGGATATCAAAAGTATTGTTGATCCTAAGTTACGAGGAGACTTTGAAATCAACTCTGCGTGGAAGGCTGTTGAGTTGGCAAGGGATTGTATGTCTGAAATGTCAACCGGAAGGCCAAACATGAGTGAGGTGGTGACAAGACTCAAAGAGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

564

Amino Acids

62.57

Weight (kDa)

6.61

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 1 - 105 1e-28 Malectin-like domain
LRR_8 PF13855 158 - 201 2.8e-06 Leucine rich repeat
LRR_4 PF12799 167 - 201 2.9e-07 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 313 - 561 4.7e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 330 - 558 2.6e-31 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1364
AccBSI CCGCTC 1 cut(s) 453
AccI GTMKAC 1 cut(s) 1168
AciI CCGC 2 cut(s) 453, 1181
AclWI GGATC 4 cut(s) 129, 280, 544, 1556
AcoI YGGCCR 1 cut(s) 1098
AcsI RAATTY 4 cut(s) 238, 268, 865, 1279
AcuI CTGAAG 1 cut(s) 292
AfaI GTAC 7 cut(s) 7, 34, 89, 199, 305, 543, 1391
AfiI CCNNNNNNNGG 1 cut(s) 586
AflIII ACRYGT 1 cut(s) 495
AgsI TTSAA 8 cut(s) 118, 142, 259, 273, 424, 848, 1411, 1586
AjnI CCWGG 1 cut(s) 1369
AluBI AGCT 8 cut(s) 389, 393, 528, 601, 995, 1355, 1434, 1524
AluI AGCT 8 cut(s) 389, 393, 528, 601, 995, 1355, 1434, 1524
Alw26I GTCTC 2 cut(s) 877, 1572
AlwI GGATC 4 cut(s) 129, 280, 544, 1556
AlwNI CAGNNNCTG 2 cut(s) 17, 545
Ama87I CYCGRG 1 cut(s) 448
AoxI GGCC 4 cut(s) 1042, 1098, 1306, 1652
ApeKI GCWGC 4 cut(s) 221, 689, 740, 1190
ApoI RAATTY 4 cut(s) 238, 268, 865, 1279
AspS9I GGNCC 1 cut(s) 173
AsuHPI GGTGA 4 cut(s) 139, 349, 1142, 1684
AsuNHI GCTAGC 1 cut(s) 389
AvaI CYCGRG 1 cut(s) 448
AvaII GGWCC 1 cut(s) 173
BaeI ACNNNNGTAYC 4 cut(s) 975, 1008, 1190, 1223
BalI TGGCCA 1 cut(s) 1100
BanI GGYRCC 1 cut(s) 1364
BbsI GAAGAC 1 cut(s) 1259
BbvI GCAGC 4 cut(s) 233, 701, 752, 1202
BciT130I CCWGG 1 cut(s) 1371
BciVI GTATCC 1 cut(s) 1367
BcoDI GTCTC 2 cut(s) 877, 1572
BfaI CTAG 4 cut(s) 30, 179, 390, 1464
BfmI CTRYAG 1 cut(s) 9
BfuI GTATCC 1 cut(s) 1367
BisI GCNGC 6 cut(s) 222, 454, 690, 741, 1182, 1191
BlsI GCNGC 6 cut(s) 223, 455, 691, 742, 1183, 1192
BmcAI AGTACT 3 cut(s) 7, 34, 305
Bme1390I CCNGG 1 cut(s) 1371
Bme18I GGWCC 1 cut(s) 173
BmeT110I CYCGRG 1 cut(s) 448
BmgT120I GGNCC 1 cut(s) 173
BmiI GGNNCC 1 cut(s) 1366
BmrFI CCNGG 1 cut(s) 1371
BmsI GCATC 4 cut(s) 363, 782, 1129, 1177
BmtI GCTAGC 1 cut(s) 393
BpiI GAAGAC 1 cut(s) 1259
BplI GAGNNNNNCTC 2 cut(s) 1431, 1463
BpmI CTGGAG 1 cut(s) 1223
BpuEI CTTGAG 2 cut(s) 214, 972
BsaJI CCNNGG 3 cut(s) 297, 967, 1369
BsaWI WCCGGW 1 cut(s) 1646
Bsc4I CCNNNNNNNGG 1 cut(s) 586
Bse1I ACTGG 4 cut(s) 538, 963, 1045, 1206
Bse3DI GCAATG 2 cut(s) 1066, 1147
BseBI CCWGG 1 cut(s) 1371
BseDI CCNNGG 3 cut(s) 297, 967, 1369
BseLI CCNNNNNNNGG 1 cut(s) 586
BseMI GCAATG 2 cut(s) 1066, 1147
BseMII CTCAG 4 cut(s) 255, 537, 912, 1377
BseNI ACTGG 4 cut(s) 538, 963, 1045, 1206
BseRI GAGGAG 2 cut(s) 1073, 1590
BseXI GCAGC 4 cut(s) 233, 701, 752, 1202
BseYI CCCAGC 1 cut(s) 217
BsgI GTGCAG 1 cut(s) 708
BshFI GGCC 4 cut(s) 1044, 1100, 1308, 1654
BshNI GGYRCC 1 cut(s) 1364
BsiHKCI CYCGRG 1 cut(s) 448
BsiSI CCGG 1 cut(s) 1647
BslFI GGGAC 1 cut(s) 452
BslI CCNNNNNNNGG 1 cut(s) 586
BsmAI GTCTC 2 cut(s) 877, 1572
BsmFI GGGAC 1 cut(s) 452
BsnI GGCC 4 cut(s) 1044, 1100, 1308, 1654
BsoBI CYCGRG 1 cut(s) 448
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 4 cut(s) 134, 285, 536, 1561
Bsp19I CCATGG 2 cut(s) 297, 967
BspACI CCGC 2 cut(s) 453, 1181
BspANI GGCC 4 cut(s) 1044, 1100, 1308, 1654
BspCNI CTCAG 4 cut(s) 256, 538, 911, 1378
BspLI GGNNCC 1 cut(s) 1366
BspMAI CTGCAG 1 cut(s) 13
BspOI GCTAGC 1 cut(s) 393
BspPI GGATC 4 cut(s) 129, 280, 544, 1556
BspT107I GGYRCC 1 cut(s) 1364
BsrBI CCGCTC 1 cut(s) 453
BsrDI GCAATG 2 cut(s) 1066, 1147
BsrGI TGTACA 1 cut(s) 87
BsrI ACTGG 4 cut(s) 538, 963, 1045, 1206
BssECI CCNNGG 3 cut(s) 297, 967, 1369
BssMI GATC 4 cut(s) 134, 285, 536, 1561
BssT1I CCWWGG 2 cut(s) 297, 967
Bst2UI CCWGG 1 cut(s) 1371
Bst6I CTCTTC 3 cut(s) 260, 875, 1412
BstAPI GCANNNNNTGC 1 cut(s) 17
BstAUI TGTACA 1 cut(s) 87
BstC8I GCNNGC 3 cut(s) 13, 391, 1363
BstDEI CTNAG 7 cut(s) 264, 385, 546, 898, 1172, 1386, 1566
BstDSI CCRYGG 2 cut(s) 297, 967
BstKTI GATC 4 cut(s) 137, 288, 539, 1564
BstMAI GTCTC 2 cut(s) 877, 1572
BstMBI GATC 4 cut(s) 134, 285, 536, 1561
BstMWI GCNNNNNNNGC 5 cut(s) 17, 1187, 1190, 1295, 1604
BstNI CCWGG 1 cut(s) 1371
BstNSI RCATGY 2 cut(s) 94, 499
BstSCI CCNGG 1 cut(s) 1369
BstSFI CTRYAG 1 cut(s) 9
BstV1I GCAGC 4 cut(s) 233, 701, 752, 1202
BstV2I GAAGAC 1 cut(s) 1259
BstX2I RGATCY 1 cut(s) 134
BstYI RGATCY 1 cut(s) 134
BsuI GTATCC 1 cut(s) 1367
BsuRI GGCC 4 cut(s) 1044, 1100, 1308, 1654
BtgI CCRYGG 2 cut(s) 297, 967
BtgZI GCGATG 1 cut(s) 35
BtsI GCAGTG 3 cut(s) 15, 275, 834
BtsIMutI CAGTG 3 cut(s) 15, 275, 834
Cac8I GCNNGC 3 cut(s) 13, 391, 1363
CaiI CAGNNNCTG 2 cut(s) 17, 545
Cfr13I GGNCC 1 cut(s) 173
Csp6I GTAC 7 cut(s) 6, 33, 88, 198, 304, 542, 1390
CviQI GTAC 7 cut(s) 6, 33, 88, 198, 304, 542, 1390
DdeI CTNAG 7 cut(s) 264, 385, 546, 898, 1172, 1386, 1566
DpnI GATC 4 cut(s) 136, 287, 538, 1563
DpnII GATC 4 cut(s) 134, 285, 536, 1561
EaeI YGGCCR 1 cut(s) 1098
Eam1104I CTCTTC 3 cut(s) 260, 875, 1412
EarI CTCTTC 3 cut(s) 260, 875, 1412
Eco130I CCWWGG 2 cut(s) 297, 967
Eco32I GATATC 2 cut(s) 1479, 1546
Eco47I GGWCC 1 cut(s) 173
Eco57I CTGAAG 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 448
EcoRI GAATTC 1 cut(s) 268
EcoRII CCWGG 1 cut(s) 1369
EcoRV GATATC 2 cut(s) 1479, 1546
EcoT14I CCWWGG 2 cut(s) 297, 967
ErhI CCWWGG 2 cut(s) 297, 967
FalI AAGNNNNNCTT 2 cut(s) 993, 1025
FaqI GGGAC 1 cut(s) 452
FauNDI CATATG 1 cut(s) 1344
FblI GTMKAC 1 cut(s) 1168
Fnu4HI GCNGC 6 cut(s) 222, 454, 690, 741, 1182, 1191
Fsp4HI GCNGC 6 cut(s) 222, 454, 690, 741, 1182, 1191
FspBI CTAG 4 cut(s) 30, 179, 390, 1464
GluI GCNGC 6 cut(s) 222, 454, 690, 741, 1182, 1191
GsaI CCCAGC 1 cut(s) 221
GsuI CTGGAG 1 cut(s) 1223
HaeIII GGCC 4 cut(s) 1044, 1100, 1308, 1654
HapII CCGG 1 cut(s) 1647
HincII GTYRAC 5 cut(s) 228, 398, 1169, 1350, 1644
HindII GTYRAC 5 cut(s) 228, 398, 1169, 1350, 1644
HinfI GANTC 9 cut(s) 55, 128, 312, 404, 836, 854, 872, 1115, 1680
HpaI GTTAAC 1 cut(s) 228
HpaII CCGG 1 cut(s) 1647
HphI GGTGA 4 cut(s) 139, 349, 1142, 1684
Hpy166II GTNNAC 9 cut(s) 88, 228, 398, 611, 650, 964, 1169, 1350, 1644
Hpy188I TCNGA 7 cut(s) 76, 311, 555, 668, 901, 930, 1636
Hpy188III TCNNGA 7 cut(s) 109, 132, 491, 1112, 1153, 1314, 1482
Hpy8I GTNNAC 9 cut(s) 88, 228, 398, 611, 650, 964, 1169, 1350, 1644
HpyAV CCTTC 5 cut(s) 148, 1058, 1328, 1597, 1644
HpyCH4V TGCA 7 cut(s) 11, 94, 689, 702, 1059, 1190, 1453
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 1187, 1190, 1295, 1604
HpyF3I CTNAG 7 cut(s) 264, 385, 546, 898, 1172, 1386, 1566
KspAI GTTAAC 1 cut(s) 228
Kzo9I GATC 4 cut(s) 134, 285, 536, 1561
LmnI GCTCC 1 cut(s) 1529
Lsp1109I GCAGC 4 cut(s) 233, 701, 752, 1202
LweI GCATC 4 cut(s) 363, 782, 1129, 1177
MaeI CTAG 4 cut(s) 30, 179, 390, 1464
MaeIII GTNAC 5 cut(s) 188, 498, 1144, 1569, 1672
MalI GATC 4 cut(s) 136, 287, 538, 1563
MbiI CCGCTC 1 cut(s) 453
MboI GATC 4 cut(s) 134, 285, 536, 1561
MboII GAAGA 8 cut(s) 247, 721, 813, 892, 1145, 1202, 1264, 1429
MflI RGATCY 1 cut(s) 134
MlsI TGGCCA 1 cut(s) 1100
MluNI TGGCCA 1 cut(s) 1100
MlyI GAGTC 4 cut(s) 137, 321, 881, 1674
MmeI TCCRAC 5 cut(s) 32, 646, 799, 864, 1030
Mox20I TGGCCA 1 cut(s) 1100
MscI TGGCCA 1 cut(s) 1100
MseI TTAA 6 cut(s) 227, 368, 381, 530, 582, 659
MslI CAYNNNNRTG 6 cut(s) 20, 359, 848, 972, 1245, 1343
Msp20I TGGCCA 1 cut(s) 1100
MspA1I CMGCKG 1 cut(s) 1355
MspI CCGG 1 cut(s) 1647
MspR9I CCNGG 1 cut(s) 1371
MvaI CCWGG 1 cut(s) 1371
MwoI GCNNNNNNNGC 5 cut(s) 17, 1187, 1190, 1295, 1604
NcoI CCATGG 2 cut(s) 297, 967
NdeI CATATG 1 cut(s) 1344
NdeII GATC 4 cut(s) 134, 285, 536, 1561
NheI GCTAGC 1 cut(s) 389
NlaIV GGNNCC 1 cut(s) 1366
NmuCI GTSAC 1 cut(s) 1672
NspI RCATGY 2 cut(s) 94, 499
PaeR7I CTCGAG 1 cut(s) 448
PciI ACATGT 1 cut(s) 495
PfeI GAWTC 5 cut(s) 55, 404, 836, 854, 1115
PkrI GCNGC 6 cut(s) 223, 455, 691, 742, 1183, 1192
PleI GAGTC 4 cut(s) 136, 320, 880, 1674
PpsI GAGTC 4 cut(s) 136, 320, 880, 1674
PscI ACATGT 1 cut(s) 495
Psp6I CCWGG 1 cut(s) 1369
PspFI CCCAGC 1 cut(s) 217
PspGI CCWGG 1 cut(s) 1369
PspN4I GGNNCC 1 cut(s) 1366
PspPI GGNCC 1 cut(s) 173
PspXI VCTCGAGB 1 cut(s) 448
PstI CTGCAG 1 cut(s) 13
PstNI CAGNNNCTG 2 cut(s) 17, 545
PsuI RGATCY 1 cut(s) 134
PvuII CAGCTG 1 cut(s) 1355
RsaI GTAC 7 cut(s) 7, 34, 89, 199, 305, 543, 1391
RsaNI GTAC 7 cut(s) 6, 33, 88, 198, 304, 542, 1390
RseI CAYNNNNRTG 6 cut(s) 20, 359, 848, 972, 1245, 1343
SalI GTCGAC 1 cut(s) 1167
SaqAI TTAA 6 cut(s) 227, 368, 381, 530, 582, 659
SatI GCNGC 6 cut(s) 222, 454, 690, 741, 1182, 1191
Sau3AI GATC 4 cut(s) 134, 285, 536, 1561
Sau96I GGNCC 1 cut(s) 173
ScaI AGTACT 3 cut(s) 7, 34, 305
SchI GAGTC 4 cut(s) 137, 321, 881, 1674
ScrFI CCNGG 1 cut(s) 1371
SfaNI GCATC 4 cut(s) 363, 782, 1129, 1177
SfcI CTRYAG 1 cut(s) 9
Sfr274I CTCGAG 1 cut(s) 448
SinI GGWCC 1 cut(s) 173
SlaI CTCGAG 1 cut(s) 448
SmiMI CAYNNNNRTG 6 cut(s) 20, 359, 848, 972, 1245, 1343
SmlI CTYRAG 3 cut(s) 193, 448, 987
SmoI CTYRAG 3 cut(s) 193, 448, 987
SsiI CCGC 2 cut(s) 453, 1181
SspI AATATT 1 cut(s) 1264
SspMI CTAG 4 cut(s) 30, 179, 390, 1464
StyD4I CCNGG 1 cut(s) 1369
StyI CCWWGG 2 cut(s) 297, 967
TaqI TCGA 5 cut(s) 449, 630, 638, 870, 1168
TatI WGTACW 5 cut(s) 5, 32, 87, 197, 303
TauI GCSGC 2 cut(s) 456, 1184
TfiI GAWTC 5 cut(s) 55, 404, 836, 854, 1115
Tru1I TTAA 6 cut(s) 227, 368, 381, 530, 582, 659
Tru9I TTAA 6 cut(s) 227, 368, 381, 530, 582, 659
TscAI CASTG 3 cut(s) 22, 282, 834
TseFI GTSAC 1 cut(s) 1672
TseI GCWGC 4 cut(s) 221, 689, 740, 1190
Tsp45I GTSAC 1 cut(s) 1672
TspDTI ATGAA 9 cut(s) 38, 331, 465, 687, 690, 715, 846, 1013, 1077
TspRI CASTG 3 cut(s) 22, 282, 834
VpaK11BI GGWCC 1 cut(s) 173
XapI RAATTY 4 cut(s) 238, 268, 865, 1279
XceI RCATGY 2 cut(s) 94, 499
XcmI CCANNNNNNNNNTGG 2 cut(s) 847, 1108
XhoI CTCGAG 1 cut(s) 448
XmiI GTMKAC 1 cut(s) 1168
XspI CTAG 4 cut(s) 30, 179, 390, 1464
ZrmI AGTACT 3 cut(s) 7, 34, 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.