RchiOBHm_Chr2g0141481

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000083
Physical Location & Seq
Reverse (-)
59040932 .. 59045047
4116 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51175

Sequence Viewer

Length: 1953 bp
ATGTTTCATTTTAGGTTCCCATTTGATATTTTTGATCGCGTCTGGTCGCGTTCATATAAGGTCGAGGATTGGGCACAATTAAGTACACGATTCACCGTTAACACGAATTATCACAATAAATACCGTCCACCGTCTGAAGTCATGCGTACTGCCGCCACGCCGAGAGATCCAAGTGATCCTTTGAATATCCGGTTGCCGCCTTCTAATGATAGCAATGCACAACATCATATTTACATGCACTTTGCAGAAGTTGAAAAGCTCCAACCCAACCAGTCTAGACGGTTCAACATCACTAGGAATGGAGACCTCTTTTATGGGCCAGTTGATGCTCCTAGTTACTTGTACACAGATACTATTTCTAGCTCTAAAGCTTTTGGCGGACAACAAAATAATTTTTCAATCTTGAAGGCTGAGAACTCTAGTCTTCCACCCATACTCAATGCTTTTGAGATTTATAAGGTGAAAGAATTCTCAGAATTGGATACAGACCAAGAAGATGTTGTTGCAATCACAAACATCAAGGAAACTTATAAAATTAGAAAAAACTGGCAAGGAGATCCATGTTCCCCTCAAGCTTACTCATGGGAGGGCATAAACTGTAGCTATCATGCTTATGAGCCCCTAAGACGAATTATAACCTTGAACTTGTCCTCGAATGGATTAACAGGGGAGATAGCTCTTTCTATATCCAATCTGGCAAAGATACAAACCCTGGATTTATCAAACAACAACTTAACAGGAACAATTCCAGAGTTTTTGTCTCAATTACCAGATCTAAATTTCATAAACTTGGAGAAAAACAAGCTTACAGGCTCAGTTCCAGTTGGATTAATTGAGAAGAGGAATAATGGTTTGCTATCACTAAGTTTGTGCCAAAATCTAAATCTATCCGGAAACGTTCCTTGCAAGAAGAACCACAAATTCATTATTCTCGAAGTGGTGTCAATCTCTGGAATTTCCATCCTCTTGTCAATTGTAGCAGCTATCTTCTGCTGGGGTCTTAAAAGGAAAAAACAACAGGGAGATGTCACAAATGTGAAAGCCACTATTCAATTGGGCTCAATGGAATCGACAAAACGAAAATTTACCCACTCTGAGATACTCAAGATTACCAACAACTTTGAAAGGATTCTTGGAAAAGGTGGATTCGGAACCGTTTATCATGGTTACCTAGACAAGACTCAAGTGGCTATCAAGATGCTTTCACCGTCAGCAGTTGATCTTCTTATGAGGGTTCATCACAAAAACTTGACAAATCTTGTTGGATATTGCAATGATAAAACTAGAGTAGGCCTGGTCTACGAGTATATGTGCAATGGAAACTTACAAGAACATCTTTCAGGATTGGAATATCTGCACTATGGTTGCAAGCCACCCATAATCCACAGGGATATAAAATCAACAAATATCTTGCTGAATGAAAATCTTCAAGCTAAACTATCAGATTTTGGCCTATCAAAGATTTTTCCAACTAATGATGGGACTCATGGGAGTCATGTATCAACTCTTGTTGCTGGCACTCCTGGGTACCTCGACCCCGAATACTACCTATCAAGTAGGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGGATTGTGCTGCTAGAAATCATCACAAGTCGACCTGTTTTATCAAAACTACAAGAGAGAATTCACATTAGCCAATGGGTTGGTTTCATGCTTGAGAAAGGAGATATTTTCAGTATTGTTGATTCAAGGTTAAAGGAAAATTTCCATGCTAACTCAGTCTGGAAAGCTGTGGAAATAGCAATGGCATGTGTGTCTCCAAATGTCATCGACAGGCCAATCATGAGTGAAGTGATTGTGGAACTAAAGGAGTCCTTGGCAACAGAACTGGCTCTAACAAAGCAGAGCCATGAAACTGAATCAAGAATTTCCATTGAGATCATGTCTAACAATTCCATTGCTATGCTTACTCCCTTAGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

650

Amino Acids

73.32

Weight (kDa)

8.19

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 4 - 154 5.8e-39 Malectin-like domain
LRR_8 PF13855 213 - 269 3.9e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 374 - 446 2.2e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 374 - 606 1.5e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 447 - 609 5.1e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 456, 531, 635
Acc65I GGTACC 1 cut(s) 1527
AccB1I GGYRCC 1 cut(s) 1527
AccI GTMKAC 2 cut(s) 1299, 1621
AccII CGCG 2 cut(s) 39, 49
AccIII TCCGGA 1 cut(s) 890
AciI CCGC 3 cut(s) 153, 197, 378
AclI AACGTT 1 cut(s) 897
AclWI GGATC 3 cut(s) 161, 170, 551
AcsI RAATTY 8 cut(s) 467, 778, 920, 954, 1082, 1650, 1729, 1893
AcuI CTGAAG 1 cut(s) 156
AfaI GTAC 4 cut(s) 85, 148, 344, 1529
AfiI CCNNNNNNNGG 1 cut(s) 1947
AjnI CCWGG 3 cut(s) 711, 1293, 1522
AjuI GAANNNNNNNTTGG 2 cut(s) 1116, 1148
AleI CACNNNNGTG 1 cut(s) 1034
Alw26I GTCTC 3 cut(s) 297, 765, 1788
AlwI GGATC 3 cut(s) 161, 170, 551
Aor13HI TCCGGA 1 cut(s) 890
AoxI GGCC 4 cut(s) 317, 1291, 1450, 1802
ApeKI GCWGC 2 cut(s) 980, 1600
ApoI RAATTY 8 cut(s) 467, 778, 920, 954, 1082, 1650, 1729, 1893
AseI ATTAAT 1 cut(s) 830
Asp700I GAANNNNTTC 3 cut(s) 467, 1128, 1425
Asp718I GGTACC 1 cut(s) 1527
AspS9I GGNCC 1 cut(s) 317
AsuHPI GGTGA 3 cut(s) 85, 472, 1197
BaeGI GKGCMC 1 cut(s) 76
BanI GGYRCC 1 cut(s) 1527
BanII GRGCYC 2 cut(s) 621, 1061
BbsI GAAGAC 1 cut(s) 416
BbvI GCAGC 2 cut(s) 992, 1587
BccI CCATC 2 cut(s) 968, 1472
BciT130I CCWGG 3 cut(s) 713, 1295, 1524
BciVI GTATCC 1 cut(s) 475
BcoDI GTCTC 3 cut(s) 297, 765, 1788
BfaI CTAG 8 cut(s) 276, 294, 333, 360, 420, 1172, 1284, 1604
BfmI CTRYAG 1 cut(s) 598
BfuI GTATCC 1 cut(s) 475
BglII AGATCT 1 cut(s) 772
BisI GCNGC 4 cut(s) 153, 197, 981, 1601
BlsI GCNGC 4 cut(s) 154, 198, 982, 1602
Bme1390I CCNGG 3 cut(s) 713, 1295, 1524
BmgT120I GGNCC 1 cut(s) 317
BmiI GGNNCC 3 cut(s) 17, 1153, 1529
BmrFI CCNGG 3 cut(s) 713, 1295, 1524
BmsI GCATC 2 cut(s) 316, 1188
BpiI GAAGAC 1 cut(s) 416
BpuEI CTTGAG 4 cut(s) 555, 1088, 1167, 1703
BsaI GGTCTC 1 cut(s) 297
BsaJI CCNNGG 3 cut(s) 711, 1523, 1842
BsaWI WCCGGW 2 cut(s) 189, 890
Bsc4I CCNNNNNNNGG 1 cut(s) 1947
Bse1I ACTGG 5 cut(s) 271, 320, 551, 821, 1860
Bse3DI GCAATG 5 cut(s) 220, 1279, 1321, 1776, 1923
BseAI TCCGGA 1 cut(s) 890
BseBI CCWGG 3 cut(s) 713, 1295, 1524
BseDI CCNNGG 3 cut(s) 711, 1523, 1842
BseGI GGATG 1 cut(s) 960
BseLI CCNNNNNNNGG 1 cut(s) 1947
BseMI GCAATG 5 cut(s) 220, 1279, 1321, 1776, 1923
BseMII CTCAG 5 cut(s) 402, 486, 828, 1086, 1758
BseNI ACTGG 5 cut(s) 271, 320, 551, 821, 1860
BseSI GKGCMC 1 cut(s) 76
BseXI GCAGC 2 cut(s) 992, 1587
BseYI CCCAGC 1 cut(s) 993
BsgI GTGCAG 1 cut(s) 1340
Bsh1236I CGCG 2 cut(s) 39, 49
BshFI GGCC 4 cut(s) 319, 1293, 1452, 1804
BshNI GGYRCC 1 cut(s) 1527
BsiSI CCGG 2 cut(s) 190, 891
BslFI GGGAC 1 cut(s) 1495
BslI CCNNNNNNNGG 1 cut(s) 1947
BsmAI GTCTC 3 cut(s) 297, 765, 1788
BsmFI GGGAC 1 cut(s) 1495
BsnI GGCC 4 cut(s) 319, 1293, 1452, 1804
Bso31I GGTCTC 1 cut(s) 297
Bsp1286I GDGCHC 3 cut(s) 76, 621, 1061
Bsp13I TCCGGA 1 cut(s) 890
Bsp1407I TGTACA 1 cut(s) 342
Bsp143I GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
BspACI CCGC 3 cut(s) 153, 197, 378
BspANI GGCC 4 cut(s) 319, 1293, 1452, 1804
BspCNI CTCAG 5 cut(s) 403, 485, 827, 1087, 1757
BspEI TCCGGA 1 cut(s) 890
BspFNI CGCG 2 cut(s) 39, 49
BspHI TCATGA 1 cut(s) 1809
BspLI GGNNCC 3 cut(s) 17, 1153, 1529
BspPI GGATC 3 cut(s) 161, 170, 551
BspT107I GGYRCC 1 cut(s) 1527
BspTNI GGTCTC 1 cut(s) 297
BsrDI GCAATG 5 cut(s) 220, 1279, 1321, 1776, 1923
BsrGI TGTACA 1 cut(s) 342
BsrI ACTGG 5 cut(s) 271, 320, 551, 821, 1860
BssECI CCNNGG 3 cut(s) 711, 1523, 1842
BssMI GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
BssT1I CCWWGG 1 cut(s) 1842
Bst2UI CCWGG 3 cut(s) 713, 1295, 1524
Bst4CI ACNGT 7 cut(s) 97, 125, 132, 282, 599, 1156, 1209
Bst6I CTCTTC 2 cut(s) 833, 1565
BstAUI TGTACA 1 cut(s) 342
BstC8I GCNNGC 2 cut(s) 1370, 1516
BstDEI CTNAG 8 cut(s) 411, 472, 623, 814, 863, 1095, 1744, 1942
BstEII GGTNACC 1 cut(s) 1166
BstENI CCTNNNNNAGG 1 cut(s) 1945
BstF5I GGATG 1 cut(s) 960
BstFNI CGCG 2 cut(s) 39, 49
BstKTI GATC 7 cut(s) 37, 169, 178, 559, 775, 1222, 1908
BstMAI GTCTC 3 cut(s) 297, 765, 1788
BstMBI GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
BstNI CCWGG 3 cut(s) 713, 1295, 1524
BstNSI RCATGY 2 cut(s) 238, 1779
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 3 cut(s) 711, 1293, 1522
BstSFI CTRYAG 1 cut(s) 598
BstSLI GKGCMC 1 cut(s) 76
BstUI CGCG 2 cut(s) 39, 49
BstV1I GCAGC 2 cut(s) 992, 1587
BstV2I GAAGAC 1 cut(s) 416
BstX2I RGATCY 3 cut(s) 166, 556, 772
BstXI CCANNNNNNTGG 1 cut(s) 1670
BstYI RGATCY 3 cut(s) 166, 556, 772
BsuI GTATCC 1 cut(s) 475
BsuRI GGCC 4 cut(s) 319, 1293, 1452, 1804
BtsCI GGATG 1 cut(s) 960
Cac8I GCNNGC 2 cut(s) 1370, 1516
CciI TCATGA 1 cut(s) 1809
Cfr13I GGNCC 1 cut(s) 317
CseI GACGC 1 cut(s) 28
Csp6I GTAC 4 cut(s) 84, 147, 343, 1528
CviQI GTAC 4 cut(s) 84, 147, 343, 1528
DdeI CTNAG 8 cut(s) 411, 472, 623, 814, 863, 1095, 1744, 1942
DpnI GATC 7 cut(s) 36, 168, 177, 558, 774, 1221, 1907
DpnII GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
Eam1104I CTCTTC 2 cut(s) 833, 1565
EarI CTCTTC 2 cut(s) 833, 1565
EciI GGCGGA 1 cut(s) 393
Eco130I CCWWGG 1 cut(s) 1842
Eco147I AGGCCT 1 cut(s) 1293
Eco24I GRGCYC 2 cut(s) 621, 1061
Eco31I GGTCTC 1 cut(s) 297
Eco57I CTGAAG 1 cut(s) 156
Eco91I GGTNACC 1 cut(s) 1166
EcoNI CCTNNNNNAGG 1 cut(s) 1945
EcoO65I GGTNACC 1 cut(s) 1166
EcoRI GAATTC 2 cut(s) 467, 1650
EcoRII CCWGG 3 cut(s) 711, 1293, 1522
EcoT14I CCWWGG 1 cut(s) 1842
EcoT38I GRGCYC 2 cut(s) 621, 1061
ErhI CCWWGG 1 cut(s) 1842
FalI AAGNNNNNCTT 6 cut(s) 163, 195, 1320, 1352, 1826, 1858
FaqI GGGAC 1 cut(s) 1495
FblI GTMKAC 2 cut(s) 1299, 1621
Fnu4HI GCNGC 4 cut(s) 153, 197, 981, 1601
FokI GGATG 1 cut(s) 947
FriOI GRGCYC 2 cut(s) 621, 1061
Fsp4HI GCNGC 4 cut(s) 153, 197, 981, 1601
FspBI CTAG 8 cut(s) 276, 294, 333, 360, 420, 1172, 1284, 1604
GluI GCNGC 4 cut(s) 153, 197, 981, 1601
GsaI CCCAGC 1 cut(s) 997
HaeIII GGCC 4 cut(s) 319, 1293, 1452, 1804
HapII CCGG 2 cut(s) 190, 891
HgaI GACGC 1 cut(s) 28
HincII GTYRAC 2 cut(s) 100, 1622
HindII GTYRAC 2 cut(s) 100, 1622
HindIII AAGCTT 3 cut(s) 369, 573, 803
HpaI GTTAAC 1 cut(s) 100
HpaII CCGG 2 cut(s) 190, 891
HphI GGTGA 3 cut(s) 85, 472, 1197
Hpy166II GTNNAC 6 cut(s) 86, 100, 128, 345, 1300, 1622
Hpy188I TCNGA 5 cut(s) 136, 475, 1096, 1151, 1444
Hpy8I GTNNAC 6 cut(s) 86, 100, 128, 345, 1300, 1622
HpyAV CCTTC 2 cut(s) 210, 400
HpyCH4III ACNGT 7 cut(s) 97, 125, 132, 282, 599, 1156, 1209
HpyCH4IV ACGT 1 cut(s) 897
HpyCH4V TGCA 9 cut(s) 218, 238, 245, 506, 906, 1272, 1314, 1357, 1368
HpyF3I CTNAG 8 cut(s) 411, 472, 623, 814, 863, 1095, 1744, 1942
HpySE526I ACGT 1 cut(s) 897
Kpn2I TCCGGA 1 cut(s) 890
KpnI GGTACC 1 cut(s) 1531
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
LmnI GCTCC 2 cut(s) 264, 334
Lsp1109I GCAGC 2 cut(s) 992, 1587
LweI GCATC 2 cut(s) 316, 1188
MaeI CTAG 8 cut(s) 276, 294, 333, 360, 420, 1172, 1284, 1604
MaeII ACGT 1 cut(s) 897
MaeIII GTNAC 3 cut(s) 335, 1027, 1166
MalI GATC 7 cut(s) 36, 168, 177, 558, 774, 1221, 1907
MboI GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
MboII GAAGA 8 cut(s) 416, 506, 850, 922, 979, 1214, 1418, 1582
MfeI CAATTG 2 cut(s) 972, 1052
MflI RGATCY 3 cut(s) 166, 556, 772
MhlI GDGCHC 3 cut(s) 76, 621, 1061
MlyI GAGTC 4 cut(s) 1174, 1477, 1501, 1847
MmeI TCCRAC 4 cut(s) 286, 805, 1243, 1493
MnlI CCTC 9 cut(s) 58, 317, 579, 580, 661, 834, 974, 1224, 1541
MroI TCCGGA 1 cut(s) 890
MroXI GAANNNNTTC 3 cut(s) 467, 1128, 1425
MseI TTAA 8 cut(s) 80, 99, 662, 734, 830, 1002, 1562, 1721
MslI CAYNNNNRTG 3 cut(s) 612, 1034, 1928
MspI CCGG 2 cut(s) 190, 891
MspR9I CCNGG 3 cut(s) 713, 1295, 1524
MunI CAATTG 2 cut(s) 972, 1052
MvaI CCWGG 3 cut(s) 713, 1295, 1524
MvnI CGCG 2 cut(s) 39, 49
NdeII GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
NlaIV GGNNCC 3 cut(s) 17, 1153, 1529
NmeAIII GCCGAG 1 cut(s) 186
NmuCI GTSAC 1 cut(s) 1027
NspI RCATGY 2 cut(s) 238, 1779
OliI CACNNNNGTG 1 cut(s) 1034
PagI TCATGA 1 cut(s) 1809
PceI AGGCCT 1 cut(s) 1293
PdmI GAANNNNTTC 3 cut(s) 467, 1128, 1425
PfeI GAWTC 6 cut(s) 90, 1067, 1129, 1146, 1712, 1886
PkrI GCNGC 4 cut(s) 154, 198, 982, 1602
PleI GAGTC 4 cut(s) 1174, 1477, 1500, 1846
PpsI GAGTC 4 cut(s) 1174, 1477, 1500, 1846
PshBI ATTAAT 1 cut(s) 830
PsiI TTATAA 3 cut(s) 456, 531, 635
Psp1406I AACGTT 1 cut(s) 897
Psp6I CCWGG 3 cut(s) 711, 1293, 1522
PspEI GGTNACC 1 cut(s) 1166
PspFI CCCAGC 1 cut(s) 993
PspGI CCWGG 3 cut(s) 711, 1293, 1522
PspN4I GGNNCC 3 cut(s) 17, 1153, 1529
PspPI GGNCC 1 cut(s) 317
PsuI RGATCY 3 cut(s) 166, 556, 772
RsaI GTAC 4 cut(s) 85, 148, 344, 1529
RsaNI GTAC 4 cut(s) 84, 147, 343, 1528
RseI CAYNNNNRTG 3 cut(s) 612, 1034, 1928
SalI GTCGAC 1 cut(s) 1620
SaqAI TTAA 8 cut(s) 80, 99, 662, 734, 830, 1002, 1562, 1721
SatI GCNGC 4 cut(s) 153, 197, 981, 1601
Sau3AI GATC 7 cut(s) 34, 166, 175, 556, 772, 1219, 1905
Sau96I GGNCC 1 cut(s) 317
SchI GAGTC 4 cut(s) 1174, 1477, 1501, 1847
ScrFI CCNGG 3 cut(s) 713, 1295, 1524
SduI GDGCHC 3 cut(s) 76, 621, 1061
SfaNI GCATC 2 cut(s) 316, 1188
SfcI CTRYAG 1 cut(s) 598
SmiMI CAYNNNNRTG 3 cut(s) 612, 1034, 1928
SmlI CTYRAG 4 cut(s) 570, 1103, 1182, 1682
SmoI CTYRAG 4 cut(s) 570, 1103, 1182, 1682
SseBI AGGCCT 1 cut(s) 1293
SsiI CCGC 3 cut(s) 153, 197, 378
SspMI CTAG 8 cut(s) 276, 294, 333, 360, 420, 1172, 1284, 1604
StuI AGGCCT 1 cut(s) 1293
StyD4I CCNGG 3 cut(s) 711, 1293, 1522
StyI CCWWGG 1 cut(s) 1842
TaaI ACNGT 7 cut(s) 97, 125, 132, 282, 599, 1156, 1209
TaiI ACGT 1 cut(s) 900
TaqI TCGA 7 cut(s) 63, 653, 933, 1070, 1533, 1621, 1797
TatI WGTACW 2 cut(s) 83, 342
TauI GCSGC 2 cut(s) 155, 199
TfiI GAWTC 6 cut(s) 90, 1067, 1129, 1146, 1712, 1886
Tru1I TTAA 8 cut(s) 80, 99, 662, 734, 830, 1002, 1562, 1721
Tru9I TTAA 8 cut(s) 80, 99, 662, 734, 830, 1002, 1562, 1721
TseFI GTSAC 1 cut(s) 1027
TseI GCWGC 2 cut(s) 980, 1600
Tsp45I GTSAC 1 cut(s) 1027
TspDTI ATGAA 7 cut(s) 42, 772, 913, 1226, 1434, 1666, 1893
VspI ATTAAT 1 cut(s) 830
XagI CCTNNNNNAGG 1 cut(s) 1945
XapI RAATTY 8 cut(s) 467, 778, 920, 954, 1082, 1650, 1729, 1893
XbaI TCTAGA 1 cut(s) 275
XceI RCATGY 2 cut(s) 238, 1779
XcmI CCANNNNNNNNNTGG 1 cut(s) 1051
XmiI GTMKAC 2 cut(s) 1299, 1621
XmnI GAANNNNTTC 3 cut(s) 467, 1128, 1425
XspI CTAG 8 cut(s) 276, 294, 333, 360, 420, 1172, 1284, 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.