Rw0G019730

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00889
OG0000083
Physical Location & Seq
Forward (+)
49098 .. 54029
4932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G019730.1

Sequence Viewer

Length: 2655 bp
ATGATGTCACTTACATTCATGCAATTCCTCTTTGCTTTTAGTCTTATGCTCCTTGTTCATGCCCAAGATCAATCAGCCTTCATCAGCATTGATTGCGGCTTACCTGTAAATTCTAGTTATACTGACTTGAATACAATCAAGTACATTTCAGATGCAAGATTCATAGACACTGGTGAGAGTAAGTCAATAAGGCCCAATCAAAGAAATAATTACACACAGCCATACTGGACTCTTAGGAGATTCCCAGAAGGAACCAGGAACTGCTACAAAATAAATGTCACAAGTGGAATGAAGTATTTGATTCGAGCAGGTTTCTATTATGGAAATTATGACGGCGATAATAAATTACCAGTATTCGAACTACATCTTGGAGCTAACTGGTGGGATACTGTGAGGTTTGAGGATGCATCAACTGACAAGAAAAAGGAGCTCATACATACCCCTTTGCGAAATTACATTCATGTTTGTTTGGTGAACATAGGCTCTGGCATCCCATTTATATCAGCTATAGAGCTAAGGCCTTTACCTAATGAGACTTATCAAACACAAACGGCCGCGGGTTCCTTAGAACTTGTTTCGCGGTATGACACTGGTCAAATGGGTACTCGTAGAGGATACAGGTTTCCATTTGATAGTTTTGATCGCATCTGGTCGAGTTCATATAACGTCGAGGATTCGGCACAATTAAGTACACCATTCACCGTTAACTCTAATTATCACAATAAATACCGTCCACCGTCTGATGTCATGCGTACTGCCGCCACGCCAAGAGATCCAAATGATCCTTTGAATATCCTGTTGCGGCCTTCTAATGATAGCAATGCAGAATATCATATTTACATGCACTTTGCAGAAGTTGAAAAGCTCCAACCCAACCAGTTTAGACGGTTCAACATCACTAGGAATGGAAACCCCTTTCATGGGTTAGTTACTCCAAGTTACTTGTACACAGCTACTATTTCTAGCTCTAAAGCTTTTGGCGGACAACAAAATAATTTTTCAATCTTCAAGGCTGAGAACTCTAGTCTTCCACCCATACTCAATGCTTTTGAGATTTATAAGGTGAAAGAATTCTCAGAATTGGATACAGACGAAGAAGATGTTGTTGCAATCACAAACATCAAGGAAACTTATAAAATTAGGAAAAACTGGCAAGGAGATCCATGTTCCCCTCAAGCTTACTCATGGGAGGGCATAAACTGTAGCTATCATGCTTACGAGCCCCTAAGACGAATTACAACCTTGAACTTGTCCTCGAATGGATTAACAGGGGAGATAGCTCTTTCTATATCCAATCTGGCAAAGATACAAACTCTGGATTTGTCAAACAACAACTTAACAGGTTCAATTCCTGAGTTTTTGTCTCAATTACCAGATCTGAATTTCATAAACTTGGAGAAAAACAAGCTTACAGGCTCAGTTCCAGTTGGATTAATTGAGAAGAGGAAGAATGGTTTGCTATCACTAAGTTTGTGCCAAAATCTAAATTTATCCGGAAACGTTCCTTGCAAGTTAAAGAAGAACCACAAATTCATTATTCTCGAAGTGGTGTCAATCTCTGGAATTTTCATCCTCTTGTCAATTGTAACAGCTATCTTCTGCTGGGGTCTTAAAAGGAAAAAACAACAGGGAGATGTCACAAATGTGAAAGCCACTATTCAATTGGGCTCAATGGAATCGACAAAACGAAAATTTACCTACTCTGAGATACTCAAGATTACCAACAACTTTGAAAGGATTCTTGGAAAAGGTGGATTCGGAACCGTTTATCATGGTTACCTAGACAAGACTCAAGTGGCTATCAAGATGCTTTCACCGTCAGCAGTTCAAGGATTTCAACAATTTCATGCAGAGGTTGATCTTCTTATGAGGGTTCATCACAAAAACTTGACAAATCTTGTTGGATATTGCAATGATAAAACTAGAGTAGGCCTGGTCTACGAGTATATGTGCAATGGAAACTTACAAGAACATCTTTCAGATAGTAGTTCAAATATCTTGACTTGGAAAGAACGACTTCGAATAGCAATAGATGCTGCACAAGGATTGGAATATCTGCACTATGGTTGCAAGCCACCCATAATCCACAGGGATATAAAATCAACAAATATCTTGCTGAATGAAAATCTTCAAGCTAAACTATCAGATTTTGGCCTATCCACGATTTTTCCAACTAATGATGGGACTCATGGGAGTCATGTATCAACTCTTGTTGCTGGCACTCCTGGGTACCTCGACCCCGAATACTACCTATCAAGTAGGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGGATTGTGCTGCTAGAAATCATCACAAGTCGACCTGTTTTATCAAAACTACAAGAGAGAATTCACATTAGCCAATGGGTTGGTTTCATGCTTGAGAAAGGAGATATTTTCAGTATTGTTGATTCAAGGTTAAAGGAAAATTTCCATGCTAACTCAGTCTGGAAAGCTGTGGAAATAGCAATGGCATGTGTGTCTCCAAATGTCATCGACAGGCCAATCATGAGTGAAGTGATTGTGGAACTAAAGGAGTCTTTGGCAACAGAACTGGCTCTAACAAGGCAGAGCAATGAAACTGAATCAAGAATTTCCATTGAGATCATGTCTAACAATTCCATTGCTATGCTTACTCCCTCAGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

884

Amino Acids

99.96

Weight (kDa)

8.07

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 30 - 355 3.7e-110 Malectin-like domain
LRR_8 PF13855 410 - 470 7.4e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 577 - 843 5.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 577 - 840 5.8e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1059, 1134
Acc36I ACCTGC 1 cut(s) 299
Acc65I GGTACC 1 cut(s) 2229
AccB1I GGYRCC 1 cut(s) 2229
AccI GTMKAC 2 cut(s) 1938, 2323
AccII CGCG 2 cut(s) 557, 580
AccIII TCCGGA 1 cut(s) 1493
AciI CCGC 7 cut(s) 96, 555, 557, 580, 759, 802, 981
AclI AACGTT 1 cut(s) 1500
AclWI GGATC 3 cut(s) 767, 776, 1154
AcoI YGGCCR 1 cut(s) 552
AfaI GTAC 6 cut(s) 143, 604, 691, 754, 947, 2231
AfiI CCNNNNNNNGG 3 cut(s) 920, 921, 2649
AjnI CCWGG 3 cut(s) 254, 1932, 2224
AjuI GAANNNNNNNTTGG 4 cut(s) 351, 383, 1725, 1757
AleI CACNNNNGTG 1 cut(s) 1643
Alw21I GWGCWC 1 cut(s) 432
Alw26I GTCTC 3 cut(s) 527, 1368, 2490
AlwI GGATC 3 cut(s) 767, 776, 1154
AlwNI CAGNNNCTG 1 cut(s) 261
Aor13HI TCCGGA 1 cut(s) 1493
AoxI GGCC 7 cut(s) 191, 518, 552, 803, 1930, 2152, 2504
ApeKI GCWGC 2 cut(s) 2036, 2302
ArsI GACNNNNNNTTYG 2 cut(s) 261, 293
AseI ATTAAT 1 cut(s) 1433
Asp700I GAANNNNTTC 4 cut(s) 1070, 1737, 2016, 2127
Asp718I GGTACC 1 cut(s) 2229
AspS9I GGNCC 1 cut(s) 192
AsuHPI GGTGA 5 cut(s) 185, 484, 691, 1075, 1806
AsuII TTCGAA 2 cut(s) 357, 2020
BanI GGYRCC 1 cut(s) 2229
BanII GRGCYC 3 cut(s) 432, 1224, 1670
BbsI GAAGAC 1 cut(s) 1019
Bbv12I GWGCWC 1 cut(s) 432
BbvI GCAGC 2 cut(s) 2023, 2289
BccI CCATC 1 cut(s) 2174
BceAI ACGGC 2 cut(s) 349, 567
BciT130I CCWGG 3 cut(s) 256, 1934, 2226
BciVI GTATCC 3 cut(s) 379, 608, 1078
BcoDI GTCTC 3 cut(s) 527, 1368, 2490
BfaI CTAG 7 cut(s) 114, 900, 963, 1023, 1781, 1923, 2306
BfmI CTRYAG 2 cut(s) 507, 1201
BfuAI ACCTGC 1 cut(s) 299
BfuI GTATCC 3 cut(s) 379, 608, 1078
BglII AGATCT 1 cut(s) 1375
BisI GCNGC 6 cut(s) 97, 555, 759, 803, 2037, 2303
BlsI GCNGC 6 cut(s) 98, 556, 760, 804, 2038, 2304
Bme1390I CCNGG 3 cut(s) 256, 1934, 2226
BmgT120I GGNCC 1 cut(s) 192
BmiI GGNNCC 4 cut(s) 253, 562, 1762, 2231
BmrFI CCNGG 3 cut(s) 256, 1934, 2226
BmsI GCATC 7 cut(s) 142, 394, 416, 498, 654, 1797, 2023
BoxI GACNNNNGTC 1 cut(s) 591
BpiI GAAGAC 1 cut(s) 1019
Bpu10I CCTNAGC 1 cut(s) 515
Bpu14I TTCGAA 2 cut(s) 357, 2020
BpuEI CTTGAG 4 cut(s) 1158, 1697, 1776, 2405
BsaJI CCNNGG 2 cut(s) 555, 2225
BsaWI WCCGGW 1 cut(s) 1493
Bsc4I CCNNNNNNNGG 3 cut(s) 920, 921, 2649
Bse1I ACTGG 9 cut(s) 175, 230, 350, 383, 595, 877, 1154, 1424, 2562
Bse3DI GCAATG 6 cut(s) 826, 1918, 1960, 2478, 2584, 2625
BseAI TCCGGA 1 cut(s) 1493
BseBI CCWGG 3 cut(s) 256, 1934, 2226
BseDI CCNNGG 2 cut(s) 555, 2225
BseGI GGATG 3 cut(s) 409, 489, 1569
BseLI CCNNNNNNNGG 3 cut(s) 920, 921, 2649
BseMI GCAATG 6 cut(s) 826, 1918, 1960, 2478, 2584, 2625
BseMII CTCAG 6 cut(s) 1005, 1089, 1344, 1431, 1695, 2460
BseNI ACTGG 9 cut(s) 175, 230, 350, 383, 595, 877, 1154, 1424, 2562
BseX3I CGGCCG 1 cut(s) 552
BseXI GCAGC 2 cut(s) 2023, 2289
BseYI CCCAGC 1 cut(s) 1602
BsgI GTGCAG 2 cut(s) 2022, 2042
Bsh1236I CGCG 2 cut(s) 557, 580
Bsh1285I CGRYCG 1 cut(s) 555
BshFI GGCC 7 cut(s) 193, 520, 554, 805, 1932, 2154, 2506
BshNI GGYRCC 1 cut(s) 2229
BsiEI CGRYCG 1 cut(s) 555
BsiHKAI GWGCWC 1 cut(s) 432
BsiSI CCGG 1 cut(s) 1494
BslFI GGGAC 1 cut(s) 2197
BslI CCNNNNNNNGG 3 cut(s) 920, 921, 2649
BsmAI GTCTC 3 cut(s) 527, 1368, 2490
BsmFI GGGAC 1 cut(s) 2197
BsnI GGCC 7 cut(s) 193, 520, 554, 805, 1932, 2154, 2506
Bsp119I TTCGAA 2 cut(s) 357, 2020
Bsp1286I GDGCHC 3 cut(s) 432, 1224, 1670
Bsp13I TCCGGA 1 cut(s) 1493
Bsp1407I TGTACA 1 cut(s) 945
Bsp143I GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
BspACI CCGC 7 cut(s) 96, 555, 557, 580, 759, 802, 981
BspANI GGCC 7 cut(s) 193, 520, 554, 805, 1932, 2154, 2506
BspCNI CTCAG 6 cut(s) 1006, 1088, 1345, 1430, 1696, 2459
BspEI TCCGGA 1 cut(s) 1493
BspFNI CGCG 2 cut(s) 557, 580
BspHI TCATGA 1 cut(s) 2511
BspLI GGNNCC 4 cut(s) 253, 562, 1762, 2231
BspMI ACCTGC 1 cut(s) 299
BspPI GGATC 3 cut(s) 767, 776, 1154
BspT104I TTCGAA 2 cut(s) 357, 2020
BspT107I GGYRCC 1 cut(s) 2229
BsrDI GCAATG 6 cut(s) 826, 1918, 1960, 2478, 2584, 2625
BsrGI TGTACA 1 cut(s) 945
BsrI ACTGG 9 cut(s) 175, 230, 350, 383, 595, 877, 1154, 1424, 2562
BssECI CCNNGG 2 cut(s) 555, 2225
BssMI GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
Bst2UI CCWGG 3 cut(s) 256, 1934, 2226
Bst4CI ACNGT 8 cut(s) 391, 703, 731, 738, 888, 1202, 1765, 1818
Bst6I CTCTTC 2 cut(s) 1436, 2267
BstAPI GCANNNNNTGC 2 cut(s) 93, 2033
BstAUI TGTACA 1 cut(s) 945
BstBI TTCGAA 2 cut(s) 357, 2020
BstC8I GCNNGC 2 cut(s) 2072, 2218
BstDSI CCRYGG 1 cut(s) 555
BstEII GGTNACC 1 cut(s) 1775
BstENI CCTNNNNNAGG 1 cut(s) 2647
BstF5I GGATG 3 cut(s) 409, 489, 1569
BstFNI CGCG 2 cut(s) 557, 580
BstKTI GATC 8 cut(s) 70, 643, 775, 784, 1162, 1378, 1861, 2610
BstMAI GTCTC 3 cut(s) 527, 1368, 2490
BstMBI GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
BstMCI CGRYCG 1 cut(s) 555
BstMWI GCNNNNNNNGC 2 cut(s) 93, 2033
BstNI CCWGG 3 cut(s) 256, 1934, 2226
BstNSI RCATGY 2 cut(s) 844, 2481
BstPAI GACNNNNGTC 1 cut(s) 591
BstPI GGTNACC 1 cut(s) 1775
BstSCI CCNGG 3 cut(s) 254, 1932, 2224
BstSFI CTRYAG 2 cut(s) 507, 1201
BstUI CGCG 2 cut(s) 557, 580
BstV1I GCAGC 2 cut(s) 2023, 2289
BstV2I GAAGAC 1 cut(s) 1019
BstX2I RGATCY 3 cut(s) 772, 1159, 1375
BstXI CCANNNNNNTGG 1 cut(s) 2372
BstYI RGATCY 3 cut(s) 772, 1159, 1375
BstZI CGGCCG 1 cut(s) 552
BsuI GTATCC 3 cut(s) 379, 608, 1078
BsuRI GGCC 7 cut(s) 193, 520, 554, 805, 1932, 2154, 2506
BtgI CCRYGG 1 cut(s) 555
BtsCI GGATG 3 cut(s) 409, 489, 1569
BtsIMutI CAGTG 2 cut(s) 168, 588
BveI ACCTGC 1 cut(s) 299
Cac8I GCNNGC 2 cut(s) 2072, 2218
CaiI CAGNNNCTG 1 cut(s) 261
CciI TCATGA 1 cut(s) 2511
Cfr13I GGNCC 1 cut(s) 192
Cfr42I CCGCGG 1 cut(s) 558
Csp6I GTAC 6 cut(s) 142, 603, 690, 753, 946, 2230
CviQI GTAC 6 cut(s) 142, 603, 690, 753, 946, 2230
DpnI GATC 8 cut(s) 69, 642, 774, 783, 1161, 1377, 1860, 2609
DpnII GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
EaeI YGGCCR 1 cut(s) 552
EagI CGGCCG 1 cut(s) 552
Eam1104I CTCTTC 2 cut(s) 1436, 2267
EarI CTCTTC 2 cut(s) 1436, 2267
EciI GGCGGA 1 cut(s) 996
Ecl136II GAGCTC 1 cut(s) 430
EclXI CGGCCG 1 cut(s) 552
Eco147I AGGCCT 2 cut(s) 520, 1932
Eco24I GRGCYC 3 cut(s) 432, 1224, 1670
Eco52I CGGCCG 1 cut(s) 552
Eco53kI GAGCTC 1 cut(s) 430
Eco91I GGTNACC 1 cut(s) 1775
EcoICRI GAGCTC 1 cut(s) 430
EcoNI CCTNNNNNAGG 1 cut(s) 2647
EcoO65I GGTNACC 1 cut(s) 1775
EcoRI GAATTC 2 cut(s) 1070, 2352
EcoRII CCWGG 3 cut(s) 254, 1932, 2224
EcoT22I ATGCAT 1 cut(s) 409
EcoT38I GRGCYC 3 cut(s) 432, 1224, 1670
FalI AAGNNNNNCTT 4 cut(s) 1959, 1991, 2001, 2033
FaqI GGGAC 1 cut(s) 2197
FauI CCCGC 1 cut(s) 550
FblI GTMKAC 2 cut(s) 1938, 2323
Fnu4HI GCNGC 6 cut(s) 97, 555, 759, 803, 2037, 2303
FokI GGATG 3 cut(s) 416, 476, 1556
FriOI GRGCYC 3 cut(s) 432, 1224, 1670
Fsp4HI GCNGC 6 cut(s) 97, 555, 759, 803, 2037, 2303
FspBI CTAG 7 cut(s) 114, 900, 963, 1023, 1781, 1923, 2306
GluI GCNGC 6 cut(s) 97, 555, 759, 803, 2037, 2303
GsaI CCCAGC 1 cut(s) 1606
HaeIII GGCC 7 cut(s) 193, 520, 554, 805, 1932, 2154, 2506
HapII CCGG 1 cut(s) 1494
HincII GTYRAC 2 cut(s) 706, 2324
HindII GTYRAC 2 cut(s) 706, 2324
HindIII AAGCTT 3 cut(s) 972, 1176, 1406
HpaI GTTAAC 1 cut(s) 706
HpaII CCGG 1 cut(s) 1494
HphI GGTGA 5 cut(s) 185, 484, 691, 1075, 1806
Hpy166II GTNNAC 7 cut(s) 475, 692, 706, 734, 948, 1939, 2324
Hpy188I TCNGA 8 cut(s) 151, 742, 1078, 1380, 1705, 1760, 1981, 2146
Hpy8I GTNNAC 7 cut(s) 475, 692, 706, 734, 948, 1939, 2324
Hpy99I CGWCG 1 cut(s) 671
HpyAV CCTTC 3 cut(s) 88, 242, 816
HpyCH4III ACNGT 8 cut(s) 391, 703, 731, 738, 888, 1202, 1765, 1818
HpyCH4IV ACGT 2 cut(s) 666, 1500
HpyF10VI GCNNNNNNNGC 2 cut(s) 93, 2033
HpySE526I ACGT 2 cut(s) 666, 1500
Kpn2I TCCGGA 1 cut(s) 1493
KpnI GGTACC 1 cut(s) 2233
KspAI GTTAAC 1 cut(s) 706
KspI CCGCGG 1 cut(s) 558
Kzo9I GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
LmnI GCTCC 4 cut(s) 54, 371, 427, 870
Lsp1109I GCAGC 2 cut(s) 2023, 2289
LweI GCATC 7 cut(s) 142, 394, 416, 498, 654, 1797, 2023
MaeI CTAG 7 cut(s) 114, 900, 963, 1023, 1781, 1923, 2306
MaeII ACGT 2 cut(s) 666, 1500
MaeIII GTNAC 7 cut(s) 6, 277, 928, 938, 1585, 1636, 1775
MalI GATC 8 cut(s) 69, 642, 774, 783, 1161, 1377, 1860, 2609
MboI GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
MfeI CAATTG 2 cut(s) 1581, 1661
MflI RGATCY 3 cut(s) 772, 1159, 1375
MhlI GDGCHC 3 cut(s) 432, 1224, 1670
MlyI GAGTC 5 cut(s) 223, 1783, 2179, 2203, 2549
MmeI TCCRAC 4 cut(s) 892, 1408, 1882, 2195
Mph1103I ATGCAT 1 cut(s) 409
MroI TCCGGA 1 cut(s) 1493
MroXI GAANNNNTTC 4 cut(s) 1070, 1737, 2016, 2127
MseI TTAA 9 cut(s) 686, 705, 1265, 1337, 1433, 1514, 1611, 2264, 2423
MslI CAYNNNNRTG 2 cut(s) 1643, 2630
MspA1I CMGCKG 1 cut(s) 557
MspI CCGG 1 cut(s) 1494
MspR9I CCNGG 3 cut(s) 256, 1934, 2226
MunI CAATTG 2 cut(s) 1581, 1661
MvaI CCWGG 3 cut(s) 256, 1934, 2226
MvnI CGCG 2 cut(s) 557, 580
MwoI GCNNNNNNNGC 2 cut(s) 93, 2033
NdeII GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
NlaIV GGNNCC 4 cut(s) 253, 562, 1762, 2231
NmuCI GTSAC 3 cut(s) 6, 277, 1636
NsiI ATGCAT 1 cut(s) 409
NspI RCATGY 2 cut(s) 844, 2481
NspV TTCGAA 2 cut(s) 357, 2020
OliI CACNNNNGTG 1 cut(s) 1643
PagI TCATGA 1 cut(s) 2511
PceI AGGCCT 2 cut(s) 520, 1932
PdmI GAANNNNTTC 4 cut(s) 1070, 1737, 2016, 2127
PfeI GAWTC 9 cut(s) 159, 240, 301, 674, 1676, 1738, 1755, 2414, 2588
PkrI GCNGC 6 cut(s) 98, 556, 760, 804, 2038, 2304
PleI GAGTC 5 cut(s) 223, 1783, 2179, 2202, 2548
PpsI GAGTC 5 cut(s) 223, 1783, 2179, 2202, 2548
PshAI GACNNNNGTC 1 cut(s) 591
PshBI ATTAAT 1 cut(s) 1433
PsiI TTATAA 2 cut(s) 1059, 1134
Psp124BI GAGCTC 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 1500
Psp6I CCWGG 3 cut(s) 254, 1932, 2224
PspEI GGTNACC 1 cut(s) 1775
PspFI CCCAGC 1 cut(s) 1602
PspGI CCWGG 3 cut(s) 254, 1932, 2224
PspN4I GGNNCC 4 cut(s) 253, 562, 1762, 2231
PspPI GGNCC 1 cut(s) 192
PstNI CAGNNNCTG 1 cut(s) 261
PsuI RGATCY 3 cut(s) 772, 1159, 1375
RsaI GTAC 6 cut(s) 143, 604, 691, 754, 947, 2231
RsaNI GTAC 6 cut(s) 142, 603, 690, 753, 946, 2230
RseI CAYNNNNRTG 2 cut(s) 1643, 2630
SacI GAGCTC 1 cut(s) 432
SacII CCGCGG 1 cut(s) 558
SalI GTCGAC 1 cut(s) 2322
SaqAI TTAA 9 cut(s) 686, 705, 1265, 1337, 1433, 1514, 1611, 2264, 2423
SatI GCNGC 6 cut(s) 97, 555, 759, 803, 2037, 2303
Sau3AI GATC 8 cut(s) 67, 640, 772, 781, 1159, 1375, 1858, 2607
Sau96I GGNCC 1 cut(s) 192
SchI GAGTC 5 cut(s) 223, 1783, 2179, 2203, 2549
ScrFI CCNGG 3 cut(s) 256, 1934, 2226
SduI GDGCHC 3 cut(s) 432, 1224, 1670
SfaNI GCATC 7 cut(s) 142, 394, 416, 498, 654, 1797, 2023
SfcI CTRYAG 2 cut(s) 507, 1201
Sfr303I CCGCGG 1 cut(s) 558
SfuI TTCGAA 2 cut(s) 357, 2020
SgrBI CCGCGG 1 cut(s) 558
SmiMI CAYNNNNRTG 2 cut(s) 1643, 2630
SmlI CTYRAG 4 cut(s) 1173, 1712, 1791, 2384
SmoI CTYRAG 4 cut(s) 1173, 1712, 1791, 2384
SseBI AGGCCT 2 cut(s) 520, 1932
SsiI CCGC 7 cut(s) 96, 555, 557, 580, 759, 802, 981
SspMI CTAG 7 cut(s) 114, 900, 963, 1023, 1781, 1923, 2306
SstI GAGCTC 1 cut(s) 432
StuI AGGCCT 2 cut(s) 520, 1932
StyD4I CCNGG 3 cut(s) 254, 1932, 2224
TaaI ACNGT 8 cut(s) 391, 703, 731, 738, 888, 1202, 1765, 1818
TaiI ACGT 2 cut(s) 669, 1503
TatI WGTACW 3 cut(s) 141, 689, 945
TauI GCSGC 4 cut(s) 99, 557, 761, 805
TfiI GAWTC 9 cut(s) 159, 240, 301, 674, 1676, 1738, 1755, 2414, 2588
Tru1I TTAA 9 cut(s) 686, 705, 1265, 1337, 1433, 1514, 1611, 2264, 2423
Tru9I TTAA 9 cut(s) 686, 705, 1265, 1337, 1433, 1514, 1611, 2264, 2423
TscAI CASTG 2 cut(s) 175, 595
TseFI GTSAC 3 cut(s) 6, 277, 1636
TseI GCWGC 2 cut(s) 2036, 2302
Tsp45I GTSAC 3 cut(s) 6, 277, 1636
TspRI CASTG 2 cut(s) 175, 595
VspI ATTAAT 1 cut(s) 1433
XagI CCTNNNNNAGG 1 cut(s) 2647
XceI RCATGY 2 cut(s) 844, 2481
XcmI CCANNNNNNNNNTGG 1 cut(s) 1660
XmiI GTMKAC 2 cut(s) 1938, 2323
XmnI GAANNNNTTC 4 cut(s) 1070, 1737, 2016, 2127
XspI CTAG 7 cut(s) 114, 900, 963, 1023, 1781, 1923, 2306
Zsp2I ATGCAT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.