AT3G21340

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000083
Physical Location & Seq
Reverse (-)
7511756 .. 7516073
4318 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G21340.2

Sequence Viewer

Length: 2700 bp
ATGGAGTACCATCCTCAAGCAATTAGGTTATGTGCGTTGATCTTCATCTCTTTCTATGCTCTTTTACACCTCGTTGAAGCACAAGACCAAAAAGGATTCATTAGTTTGGATTGCGGGTCATTGCCAAATGAGCCTCCTTACAACGATCCTTCAACCGGATTAACATACTCGACGGACGATGGTTTCGTGCAGAGTGGCAAAACTGGAAGAATCCAGAAAGCGTTCGAGTCGATCTTCAGTAAACCGTCTTTGAAGCTTAGATACTTCCCGGACGGATTCCGAAACTGCTATACCTTGAATGTCACGCAAGACACAAACTATCTGATCAAAGCTGTATTTGTGTATGGTAACTACGATGGTCTTAACAATCCCCCGAGTTTCGATCTTTACCTTGGTCCGAATCTATGGGTAACGGTTGATATGAATGGACGGACCAATGGTACTATCCAGGAGATTATCCACAAGACCATATCTAAGTCTCTCCAGGTCTGTCTTGTTAAGACAGGAACAAGCTCACCTATGATTAATACGTTAGAGCTACGACCACTTAAAAACAATACTTACAATACTCAGAGTGGCTCTCTGAAGTATTTCTTCCGATATTATTTCAGCGGTTCAGGCCAAAACATACGGTACCCTGATGATGTCAATGATCGTAAATGGTATCCATTCTTTGATGCAAAAGAGTGGACAGAGTTAACAACCAATCTGAATATAAACAGTTCTAATGGTTATGCACCACCAGAAGTTGTGATGGCGTCAGCCTCAACGCCTATAAGTACTTTTGGAACATGGAACTTCTCATGGTTATTGCCATCTTCCACAACCCAATTTTATGTGTACATGCATTTTGCCGAGATTCAAACTCTACGGTCCCTCGATACCCGAGAATTCAAAGTGACGTTGAATGGAAAACTTGCTTATGAACGCTACAGCCCTAAAACGTTAGCCACCGAAACCATTTTCTATTCGACACCACAACAATGTGAAGATGGGACATGCCTCTTGGAGTTGACGAAAACACCTAAGTCTACTCTTCCTCCTCTCATGAACGCTCTTGAGGTTTTCACCGTGATCGATTTTCCACAGATGGAAACAAATCCAGATGATGTTGCTGCTATCAAGAGTATCCAAAGCACTTATGGATTAAGTAAAATCAGCTGGCAAGGAGATCCATGCGTTCCTAAACAGTTTTTGTGGGAGGGTTTAAACTGCAATAATCTAGATAACTCCACGCCGCCTATTGTCACTTCCTTAAACTTATCGTCAAGTCATTTAACGGGGATCATCGCGCAAGGCATTCAGAATCTGACACACCTACAAGAACTAGACTTGTCAAATAACAATTTGACGGGAGGAATACCCGAATTTCTTGCTGACATAAAATCACTCTTAGTAATAAATTTAAGTGGGAACAATTTTAATGGCTCTATTCCTCAAATCCTTTTACAGAAGAAAGGACTAAAGCTAATTCTTGAAGGAAACGCCAATCTGATTTGTCCGGATGGATTATGTGTAAACAAAGCTGGCAATGGTGGTGCCAAGAAAATGAATGTTGTAATACCGATTGTTGCATCAGTTGCGTTTGTGGTTGTTCTTGGATCTGCATTGGCGTTCTTTTTTATTTTCAAAAAGAAAAAGACATCAAACAGTCAAGATTTAGGTCCATCTTCATATACTCAAGTATCAGAAGTTAGAACAATCAGATCTTCAGAGTCGGCAATAATGACTAAGAACAGAAGATTTACATATTCGGAGGTTGTAACAATGACAAATAACTTTGAAAGAGTTCTTGGTAAAGGAGGATTTGGAATGGTTTATCATGGAACTGTAAATAATACTGAACAAGTAGCCGTTAAAATGCTTTCACACTCATCTTCTCAAGGATATAAAGAATTCAAAGCAGAGGTGGAACTTCTTCTCAGAGTTCACCACAAAAATTTGGTTGGCCTCGTTGGATATTGTGATGAAGGAGAAAACTTGGCTCTTATCTACGAGTACATGGCTAACGGAGACTTGAGAGAACATATGTCAGGAAAGCGAGGTGGATCTATTCTAAATTGGGAAACTAGACTAAAAATAGTTGTCGAGTCTGCCCAAGGTTTGGAATACTTGCATAATGGATGCAAACCACCAATGGTTCATAGGGATGTTAAAACCACAAATATATTGTTGAATGAACACCTCCATGCTAAGCTAGCTGATTTTGGGCTTTCGAGATCTTTTCCAATTGAAGGAGAAACTCATGTGTCAACAGTTGTTGCTGGAACTCCTGGATACCTTGATCCAGAATATTACCGAACAAATTGGTTGAACGAGAAAAGTGATGTTTATAGCTTTGGAATTGTACTATTAGAGATCATCACAAACCAACTTGTGATCAATCAAAGTCGTGAAAAACCACATATAGCAGAATGGGTGGGGTTAATGCTTACAAAAGGAGACATTCAAAACATTATGGATCCAAAACTTTATGGTGATTATGACTCTGGTTCTGTCTGGAGAGCAGTTGAACTAGCAATGTCATGTCTAAATCCTTCTTCAGCTAGAAGACCAACAATGTCTCAAGTTGTTATCGAATTAAACGAATGTTTGTCATATGAAAACGCAAGAGGAGGAACGAGTCAAAACATGAACTCAGAGAGTTCAATAGAAGTCAGCATGAACTTTGATATTGGAGCTACCCCTGATGCTCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

899

Amino Acids

100.19

Weight (kDa)

6.0

Isoelectric Point (pI)

33.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 36 - 358 1.7e-126 Malectin-like domain
LRR_8 PF13855 416 - 474 4.2e-09 Leucine rich repeat
LRR_4 PF12799 438 - 479 2.6e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 594 - 702 1.1e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 595 - 689 5.4e-14 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 633
AccB1I GGYRCC 2 cut(s) 633, 1538
AccB7I CCANNNNNTGG 1 cut(s) 2104
AccI GTMKAC 1 cut(s) 1031
AccII CGCG 1 cut(s) 1292
AccIII TCCGGA 1 cut(s) 1501
AciI CCGC 3 cut(s) 114, 612, 1238
AclI AACGTT 1 cut(s) 944
AclWI GGATC 8 cut(s) 140, 1166, 1292, 1609, 2056, 2279, 2456, 2469
AcsI RAATTY 5 cut(s) 890, 1367, 1402, 1895, 1939
AcuI CTGAAG 4 cut(s) 220, 605, 1695, 2526
AcyI GRCGYC 1 cut(s) 758
AfaI GTAC 7 cut(s) 8, 442, 635, 781, 842, 2000, 2349
AfiI CCNNNNNNNGG 3 cut(s) 155, 2104, 2234
AjnI CCWGG 3 cut(s) 447, 483, 2272
AjuI GAANNNNNNNTTGG 2 cut(s) 1776, 1808
Alw26I GTCTC 4 cut(s) 483, 2007, 2436, 2568
AlwI GGATC 8 cut(s) 140, 1166, 1292, 1609, 2056, 2279, 2456, 2469
AlwNI CAGNNNCTG 1 cut(s) 1309
Ama87I CYCGRG 2 cut(s) 373, 885
Aor13HI TCCGGA 1 cut(s) 1501
AoxI GGCC 2 cut(s) 619, 1948
ApeKI GCWGC 1 cut(s) 1115
ApoI RAATTY 5 cut(s) 890, 1367, 1402, 1895, 1939
ArsI GACNNNNNNTTYG 2 cut(s) 167, 199
AseI ATTAAT 1 cut(s) 525
Asp700I GAANNNNTTC 4 cut(s) 221, 590, 1788, 1917
Asp718I GGTACC 1 cut(s) 633
AspLEI GCGC 1 cut(s) 1294
AspS9I GGNCC 4 cut(s) 395, 432, 873, 1664
AsuC2I CCSGG 1 cut(s) 269
AsuHPI GGTGA 4 cut(s) 507, 1060, 1922, 2489
AsuNHI GCTAGC 1 cut(s) 2197
AvaI CYCGRG 2 cut(s) 373, 885
AvaII GGWCC 4 cut(s) 395, 432, 873, 1664
BaeI ACNNNNGTAYC 2 cut(s) 1668, 1701
BamHI GGATCC 1 cut(s) 2461
BanI GGYRCC 2 cut(s) 633, 1538
BarI GAAGNNNNNNTAC 2 cut(s) 245, 277
BbsI GAAGAC 1 cut(s) 2557
BbvI GCAGC 1 cut(s) 1102
BccI CCATC 9 cut(s) 18, 173, 350, 748, 823, 986, 1084, 1499, 1675
BceAI ACGGC 1 cut(s) 1838
BcgI CGANNNNNNTGC 2 cut(s) 1355, 1389
BciT130I CCWGG 3 cut(s) 449, 485, 2274
BciVI GTATCC 3 cut(s) 675, 1139, 2270
BclI TGATCA 2 cut(s) 324, 2379
BcnI CCSGG 1 cut(s) 269
BcoDI GTCTC 4 cut(s) 483, 2007, 2436, 2568
BfaI CTAG 6 cut(s) 1223, 1328, 2070, 2198, 2516, 2547
BfmI CTRYAG 1 cut(s) 931
BfuI GTATCC 3 cut(s) 675, 1139, 2270
BglII AGATCT 2 cut(s) 1706, 2219
BisI GCNGC 2 cut(s) 1116, 1238
BlpI GCTNAGC 1 cut(s) 2193
BlsI GCNGC 2 cut(s) 1117, 1239
BmcAI AGTACT 1 cut(s) 781
Bme1390I CCNGG 4 cut(s) 269, 449, 485, 2274
Bme18I GGWCC 4 cut(s) 395, 432, 873, 1664
BmeT110I CYCGRG 2 cut(s) 373, 885
BmgT120I GGNCC 4 cut(s) 395, 432, 873, 1664
BmiI GGNNCC 4 cut(s) 635, 875, 1540, 2463
BmrFI CCNGG 4 cut(s) 269, 449, 485, 2274
BmsI GCATC 4 cut(s) 667, 1583, 2114, 2680
BmtI GCTAGC 1 cut(s) 2201
BpiI GAAGAC 1 cut(s) 2557
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 2 cut(s) 467, 2521
Bpu1102I GCTNAGC 1 cut(s) 2193
BpuEI CTTGAG 5 cut(s) 1079, 1665, 1866, 2038, 2550
BpuMI CCSGG 1 cut(s) 269
Bsa29I ATCGAT 1 cut(s) 1077
BsaBI GATNNNNATC 1 cut(s) 44
BsaHI GRCGYC 1 cut(s) 758
BsaJI CCNNGG 2 cut(s) 391, 2098
BsaWI WCCGGW 2 cut(s) 155, 1501
BsaXI ACNNNNNCTCC 2 cut(s) 1024, 1054
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 2104, 2234
Bse1I ACTGG 1 cut(s) 208
Bse3DI GCAATG 3 cut(s) 119, 1537, 2526
Bse8I GATNNNNATC 1 cut(s) 44
BseAI TCCGGA 1 cut(s) 1501
BseBI CCWGG 3 cut(s) 449, 485, 2274
BseCI ATCGAT 1 cut(s) 1077
BseDI CCNNGG 2 cut(s) 391, 2098
BseGI GGATG 4 cut(s) 10, 1510, 2129, 2155
BseJI GATNNNNATC 1 cut(s) 44
BseLI CCNNNNNNNGG 3 cut(s) 155, 2104, 2234
BseMI GCAATG 3 cut(s) 119, 1537, 2526
BseMII CTCAG 3 cut(s) 584, 1936, 2652
BseNI ACTGG 1 cut(s) 208
BseRI GAGGAG 2 cut(s) 1032, 2628
BseXI GCAGC 1 cut(s) 1102
BsgI GTGCAG 1 cut(s) 209
Bsh1236I CGCG 1 cut(s) 1292
BshFI GGCC 2 cut(s) 621, 1950
BshNI GGYRCC 2 cut(s) 633, 1538
BshVI ATCGAT 1 cut(s) 1077
BsiHKCI CYCGRG 2 cut(s) 373, 885
BsiSI CCGG 3 cut(s) 156, 269, 1502
BslFI GGGAC 2 cut(s) 859, 1009
BslI CCNNNNNNNGG 3 cut(s) 155, 2104, 2234
BsmAI GTCTC 4 cut(s) 483, 2007, 2436, 2568
BsmFI GGGAC 2 cut(s) 859, 1009
BsmI GAATGC 1 cut(s) 1299
BsnI GGCC 2 cut(s) 621, 1950
BsoBI CYCGRG 2 cut(s) 373, 885
Bsp13I TCCGGA 1 cut(s) 1501
Bsp1407I TGTACA 1 cut(s) 840
Bsp1720I GCTNAGC 1 cut(s) 2193
BspACI CCGC 3 cut(s) 114, 612, 1238
BspANI GGCC 2 cut(s) 621, 1950
BspCNI CTCAG 3 cut(s) 583, 1935, 2651
BspDI ATCGAT 1 cut(s) 1077
BspEI TCCGGA 1 cut(s) 1501
BspFNI CGCG 1 cut(s) 1292
BspHI TCATGA 1 cut(s) 1047
BspLI GGNNCC 4 cut(s) 635, 875, 1540, 2463
BspOI GCTAGC 1 cut(s) 2201
BspPI GGATC 8 cut(s) 140, 1166, 1292, 1609, 2056, 2279, 2456, 2469
BspT107I GGYRCC 2 cut(s) 633, 1538
BsrDI GCAATG 3 cut(s) 119, 1537, 2526
BsrGI TGTACA 1 cut(s) 840
BsrI ACTGG 1 cut(s) 208
BssECI CCNNGG 2 cut(s) 391, 2098
BssNI GRCGYC 1 cut(s) 758
BssT1I CCWWGG 2 cut(s) 391, 2098
Bst2UI CCWGG 3 cut(s) 449, 485, 2274
Bst6I CTCTTC 1 cut(s) 1041
BstACI GRCGYC 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 1580
BstAUI TGTACA 1 cut(s) 840
BstC8I GCNNGC 3 cut(s) 1163, 1528, 2199
BstDEI CTNAG 9 cut(s) 257, 474, 570, 1026, 1393, 1731, 1922, 2193, 2638
BstF5I GGATG 4 cut(s) 10, 1510, 2129, 2155
BstFNI CGCG 1 cut(s) 1292
BstHHI GCGC 1 cut(s) 1294
BstMAI GTCTC 4 cut(s) 483, 2007, 2436, 2568
BstMWI GCNNNNNNNGC 4 cut(s) 130, 618, 1580, 2198
BstNI CCWGG 3 cut(s) 449, 485, 2274
BstNSI RCATGY 2 cut(s) 847, 1002
BstSCI CCNGG 4 cut(s) 267, 447, 483, 2272
BstSFI CTRYAG 1 cut(s) 931
BstUI CGCG 1 cut(s) 1292
BstV1I GCAGC 1 cut(s) 1102
BstV2I GAAGAC 1 cut(s) 2557
BstX2I RGATCY 6 cut(s) 1171, 1601, 1706, 2048, 2219, 2461
BstYI RGATCY 6 cut(s) 1171, 1601, 1706, 2048, 2219, 2461
Bsu15I ATCGAT 1 cut(s) 1077
BsuI GTATCC 3 cut(s) 675, 1139, 2270
BsuRI GGCC 2 cut(s) 621, 1950
BsuTUI ATCGAT 1 cut(s) 1077
BtgZI GCGATG 1 cut(s) 1273
BtsCI GGATG 4 cut(s) 10, 1510, 2129, 2155
Cac8I GCNNGC 3 cut(s) 1163, 1528, 2199
CaiI CAGNNNCTG 1 cut(s) 1309
CciI TCATGA 1 cut(s) 1047
CfoI GCGC 1 cut(s) 1294
Cfr13I GGNCC 4 cut(s) 395, 432, 873, 1664
ClaI ATCGAT 1 cut(s) 1077
CseI GACGC 1 cut(s) 747
Csp6I GTAC 7 cut(s) 7, 441, 634, 780, 841, 1999, 2348
CviQI GTAC 7 cut(s) 7, 441, 634, 780, 841, 1999, 2348
DdeI CTNAG 9 cut(s) 257, 474, 570, 1026, 1393, 1731, 1922, 2193, 2638
DraI TTTAAA 1 cut(s) 1209
Eam1104I CTCTTC 1 cut(s) 1041
EarI CTCTTC 1 cut(s) 1041
Eco130I CCWWGG 2 cut(s) 391, 2098
Eco47I GGWCC 4 cut(s) 395, 432, 873, 1664
Eco57I CTGAAG 4 cut(s) 220, 605, 1695, 2526
Eco88I CYCGRG 2 cut(s) 373, 885
EcoRI GAATTC 2 cut(s) 890, 1895
EcoRII CCWGG 3 cut(s) 447, 483, 2272
EcoT14I CCWWGG 2 cut(s) 391, 2098
EcoT22I ATGCAT 1 cut(s) 849
ErhI CCWWGG 2 cut(s) 391, 2098
FalI AAGNNNNNCTT 2 cut(s) 578, 610
FaqI GGGAC 2 cut(s) 859, 1009
FauI CCCGC 1 cut(s) 107
FauNDI CATATG 2 cut(s) 2028, 2599
FbaI TGATCA 2 cut(s) 324, 2379
FblI GTMKAC 1 cut(s) 1031
Fnu4HI GCNGC 2 cut(s) 1116, 1238
FokI GGATG 3 cut(s) 1517, 2136, 2162
Fsp4HI GCNGC 2 cut(s) 1116, 1238
FspBI CTAG 6 cut(s) 1223, 1328, 2070, 2198, 2516, 2547
GlaI GCGC 1 cut(s) 1293
GluI GCNGC 2 cut(s) 1116, 1238
GsuI CTGGAG 2 cut(s) 467, 2521
HaeIII GGCC 2 cut(s) 621, 1950
HapII CCGG 3 cut(s) 156, 269, 1502
HgaI GACGC 1 cut(s) 747
HhaI GCGC 1 cut(s) 1294
Hin1I GRCGYC 1 cut(s) 758
Hin6I GCGC 1 cut(s) 1292
HinP1I GCGC 1 cut(s) 1292
HincII GTYRAC 3 cut(s) 699, 1014, 2253
HindII GTYRAC 3 cut(s) 699, 1014, 2253
HindIII AAGCTT 1 cut(s) 254
HpaI GTTAAC 1 cut(s) 699
HpaII CCGG 3 cut(s) 156, 269, 1502
HphI GGTGA 4 cut(s) 507, 1060, 1922, 2489
Hpy166II GTNNAC 9 cut(s) 242, 690, 699, 841, 1014, 1032, 1519, 1930, 2253
Hpy8I GTNNAC 9 cut(s) 242, 690, 699, 841, 1014, 1032, 1519, 1930, 2253
Hpy99I CGWCG 1 cut(s) 175
HpyAV CCTTC 5 cut(s) 159, 1472, 1964, 2228, 2547
HpyCH4IV ACGT 3 cut(s) 530, 902, 944
HpyCH4V TGCA 9 cut(s) 190, 680, 737, 847, 1215, 1574, 1607, 2116, 2127
HpyF10VI GCNNNNNNNGC 4 cut(s) 130, 618, 1580, 2198
HpyF3I CTNAG 9 cut(s) 257, 474, 570, 1026, 1393, 1731, 1922, 2193, 2638
HpySE526I ACGT 3 cut(s) 530, 902, 944
Hsp92I GRCGYC 1 cut(s) 758
HspAI GCGC 1 cut(s) 1292
Kpn2I TCCGGA 1 cut(s) 1501
KpnI GGTACC 1 cut(s) 637
Ksp22I TGATCA 2 cut(s) 324, 2379
KspAI GTTAAC 1 cut(s) 699
LmnI GCTCC 1 cut(s) 2678
Lsp1109I GCAGC 1 cut(s) 1102
LweI GCATC 4 cut(s) 667, 1583, 2114, 2680
MaeI CTAG 6 cut(s) 1223, 1328, 2070, 2198, 2516, 2547
MaeII ACGT 3 cut(s) 530, 902, 944
MaeIII GTNAC 6 cut(s) 301, 347, 409, 898, 1246, 1762
MfeI CAATTG 1 cut(s) 2229
MflI RGATCY 6 cut(s) 1171, 1601, 1706, 2048, 2219, 2461
MlyI GAGTC 5 cut(s) 236, 1724, 2099, 2480, 2632
MmeI TCCRAC 1 cut(s) 1936
Mph1103I ATGCAT 1 cut(s) 849
MroI TCCGGA 1 cut(s) 1501
MroXI GAANNNNTTC 4 cut(s) 221, 590, 1788, 1917
MslI CAYNNNNRTG 3 cut(s) 982, 2148, 2187
MspA1I CMGCKG 2 cut(s) 612, 1161
MspI CCGG 3 cut(s) 156, 269, 1502
MspR9I CCNGG 4 cut(s) 269, 449, 485, 2274
MssI GTTTAAAC 1 cut(s) 1209
MunI CAATTG 1 cut(s) 2229
Mva1269I GAATGC 1 cut(s) 1299
MvaI CCWGG 3 cut(s) 449, 485, 2274
MvnI CGCG 1 cut(s) 1292
MwoI GCNNNNNNNGC 4 cut(s) 130, 618, 1580, 2198
NciI CCSGG 1 cut(s) 269
NdeI CATATG 2 cut(s) 2028, 2599
NheI GCTAGC 1 cut(s) 2197
NlaIV GGNNCC 4 cut(s) 635, 875, 1540, 2463
NmeAIII GCCGAG 1 cut(s) 880
NmuCI GTSAC 3 cut(s) 301, 898, 1246
NsiI ATGCAT 1 cut(s) 849
NspI RCATGY 2 cut(s) 847, 1002
PagI TCATGA 1 cut(s) 1047
PcsI WCGNNNNNNNCGW 2 cut(s) 183, 2583
PctI GAATGC 1 cut(s) 1299
PdmI GAANNNNTTC 4 cut(s) 221, 590, 1788, 1917
PfeI GAWTC 6 cut(s) 96, 210, 276, 400, 859, 1306
PflMI CCANNNNNTGG 1 cut(s) 2104
PfoI TCCNGGA 3 cut(s) 267, 447, 2272
PkrI GCNGC 2 cut(s) 1117, 1239
PleI GAGTC 5 cut(s) 235, 1723, 2098, 2480, 2631
PmeI GTTTAAAC 1 cut(s) 1209
PpsI GAGTC 5 cut(s) 235, 1723, 2098, 2480, 2631
PshBI ATTAAT 1 cut(s) 525
Psp1406I AACGTT 1 cut(s) 944
Psp6I CCWGG 3 cut(s) 447, 483, 2272
PspGI CCWGG 3 cut(s) 447, 483, 2272
PspN4I GGNNCC 4 cut(s) 635, 875, 1540, 2463
PspPI GGNCC 4 cut(s) 395, 432, 873, 1664
PstNI CAGNNNCTG 1 cut(s) 1309
PsuI RGATCY 6 cut(s) 1171, 1601, 1706, 2048, 2219, 2461
PvuII CAGCTG 1 cut(s) 1161
RsaI GTAC 7 cut(s) 8, 442, 635, 781, 842, 2000, 2349
RsaNI GTAC 7 cut(s) 7, 441, 634, 780, 841, 1999, 2348
RseI CAYNNNNRTG 3 cut(s) 982, 2148, 2187
SatI GCNGC 2 cut(s) 1116, 1238
Sau96I GGNCC 4 cut(s) 395, 432, 873, 1664
ScaI AGTACT 1 cut(s) 781
SchI GAGTC 5 cut(s) 236, 1724, 2099, 2480, 2632
ScrFI CCNGG 4 cut(s) 269, 449, 485, 2274
SfaNI GCATC 4 cut(s) 667, 1583, 2114, 2680
SfcI CTRYAG 1 cut(s) 931
SinI GGWCC 4 cut(s) 395, 432, 873, 1664
SmiMI CAYNNNNRTG 3 cut(s) 982, 2148, 2187
SmlI CTYRAG 6 cut(s) 15, 1058, 1680, 1881, 2017, 2565
SmoI CTYRAG 6 cut(s) 15, 1058, 1680, 1881, 2017, 2565
SsiI CCGC 3 cut(s) 114, 612, 1238
SspI AATATT 1 cut(s) 2294
SspMI CTAG 6 cut(s) 1223, 1328, 2070, 2198, 2516, 2547
StyD4I CCNGG 4 cut(s) 267, 447, 483, 2272
StyI CCWWGG 2 cut(s) 391, 2098
TaiI ACGT 3 cut(s) 533, 905, 947
TatI WGTACW 4 cut(s) 779, 840, 1998, 2347
TauI GCSGC 1 cut(s) 1240
TfiI GAWTC 6 cut(s) 96, 210, 276, 400, 859, 1306
TseFI GTSAC 3 cut(s) 301, 898, 1246
TseI GCWGC 1 cut(s) 1115
Tsp45I GTSAC 3 cut(s) 301, 898, 1246
TspGWI ACGGA 4 cut(s) 188, 288, 445, 2025
Van91I CCANNNNNTGG 1 cut(s) 2104
VpaK11BI GGWCC 4 cut(s) 395, 432, 873, 1664
VspI ATTAAT 1 cut(s) 525
XapI RAATTY 5 cut(s) 890, 1367, 1402, 1895, 1939
XbaI TCTAGA 1 cut(s) 1222
XceI RCATGY 2 cut(s) 847, 1002
XcmI CCANNNNNNNNNTGG 1 cut(s) 1139
XmiI GTMKAC 1 cut(s) 1031
XmnI GAANNNNTTC 4 cut(s) 221, 590, 1788, 1917
XspI CTAG 6 cut(s) 1223, 1328, 2070, 2198, 2516, 2547
ZrmI AGTACT 1 cut(s) 781
Zsp2I ATGCAT 1 cut(s) 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.