RLG00000008806

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
39716350 .. 39718039
1690 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008806

Sequence Viewer

Length: 432 bp
ATGGGGGCTATTTTGAGTTTGGCTGGTCCCAAATCTGGGACAAACGATTATCATGAGGTTGCTCAGAATGCCTTTTTGTCAGAGGCAAAGAGTGTCATCATAAATGCTCTTGCCATGGAGCTGGACAATATGTCTAACTTGTTAGACAAATGCAATTTCCAGATTCCTATAGAGGTTATTAATTCCACTACTTTGGGTTGGGAAGACAGACTTCGAATAGCAGTAGACGCTGCACAAGGATTGGAGTATCTACATTATGGTTGTAAGCCACCTATAATTCACAGGGATGTGAAATCAGCAAACATCTTGCTGACTGAAAACTTCCAAGCCAAAGTATCTGATTTTGGCCTATCCAGAAATTTCCCTACAAACCTTGTGACTCATATAACAACTGGCGTTGCTGGTACTCCCGGGTACCTTGACCCTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

144

Amino Acids

15.57

Weight (kDa)

5.09

Isoelectric Point (pI)

28.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 28 - 121 2.6e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 52 - 143 7.7e-15 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 414
AccB1I GGYRCC 1 cut(s) 414
AccI GTMKAC 1 cut(s) 225
AcsI RAATTY 1 cut(s) 358
AfaI GTAC 2 cut(s) 406, 416
AfiI CCNNNNNNNGG 2 cut(s) 35, 36
AhdI GACNNNNNGTC 1 cut(s) 130
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
Ama87I CYCGRG 1 cut(s) 410
AoxI GGCC 1 cut(s) 346
ApeKI GCWGC 1 cut(s) 230
ApoI RAATTY 1 cut(s) 358
AseI ATTAAT 1 cut(s) 180
Asp718I GGTACC 1 cut(s) 414
AspS9I GGNCC 1 cut(s) 26
AsuC2I CCSGG 2 cut(s) 411, 412
AsuII TTCGAA 1 cut(s) 214
AvaI CYCGRG 1 cut(s) 410
AvaII GGWCC 1 cut(s) 26
BanI GGYRCC 1 cut(s) 414
BbsI GAAGAC 1 cut(s) 210
BbvI GCAGC 1 cut(s) 217
BcnI CCSGG 2 cut(s) 411, 412
BfmI CTRYAG 1 cut(s) 168
BisI GCNGC 1 cut(s) 231
BlsI GCNGC 1 cut(s) 232
Bme1390I CCNGG 2 cut(s) 411, 412
Bme18I GGWCC 1 cut(s) 26
BmeRI GACNNNNNGTC 1 cut(s) 130
BmeT110I CYCGRG 1 cut(s) 410
BmgT120I GGNCC 1 cut(s) 26
BmiI GGNNCC 2 cut(s) 28, 416
BmrFI CCNGG 2 cut(s) 411, 412
BpiI GAAGAC 1 cut(s) 210
Bpu14I TTCGAA 1 cut(s) 214
BpuMI CCSGG 2 cut(s) 411, 412
BsaJI CCNNGG 2 cut(s) 114, 410
Bsc4I CCNNNNNNNGG 2 cut(s) 35, 36
Bse1I ACTGG 1 cut(s) 397
BseDI CCNNGG 2 cut(s) 114, 410
BseGI GGATG 1 cut(s) 292
BseLI CCNNNNNNNGG 2 cut(s) 35, 36
BseMII CTCAG 2 cut(s) 77, 417
BseNI ACTGG 1 cut(s) 397
BseXI GCAGC 1 cut(s) 217
BsgI GTGCAG 1 cut(s) 216
BshFI GGCC 1 cut(s) 348
BshNI GGYRCC 1 cut(s) 414
BsiHKCI CYCGRG 1 cut(s) 410
BsiSI CCGG 1 cut(s) 411
BslFI GGGAC 2 cut(s) 12, 52
BslI CCNNNNNNNGG 2 cut(s) 35, 36
BsmFI GGGAC 2 cut(s) 12, 52
BsmI GAATGC 1 cut(s) 73
BsnI GGCC 1 cut(s) 348
BsoBI CYCGRG 1 cut(s) 410
Bsp119I TTCGAA 1 cut(s) 214
Bsp19I CCATGG 1 cut(s) 114
BspANI GGCC 1 cut(s) 348
BspCNI CTCAG 2 cut(s) 76, 418
BspHI TCATGA 1 cut(s) 52
BspLI GGNNCC 2 cut(s) 28, 416
BspT104I TTCGAA 1 cut(s) 214
BspT107I GGYRCC 1 cut(s) 414
BsrI ACTGG 1 cut(s) 397
BssECI CCNNGG 2 cut(s) 114, 410
BssT1I CCWWGG 1 cut(s) 114
BstBI TTCGAA 1 cut(s) 214
BstDEI CTNAG 2 cut(s) 63, 426
BstDSI CCRYGG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 292
BstMWI GCNNNNNNNGC 2 cut(s) 68, 227
BstSCI CCNGG 2 cut(s) 409, 410
BstSFI CTRYAG 1 cut(s) 168
BstV1I GCAGC 1 cut(s) 217
BstV2I GAAGAC 1 cut(s) 210
BstXI CCANNNNNNTGG 2 cut(s) 121, 193
BsuRI GGCC 1 cut(s) 348
BtgI CCRYGG 1 cut(s) 114
BtsCI GGATG 1 cut(s) 292
CciI TCATGA 1 cut(s) 52
Cfr13I GGNCC 1 cut(s) 26
Cfr9I CCCGGG 1 cut(s) 410
CseI GACGC 1 cut(s) 236
Csp6I GTAC 2 cut(s) 405, 415
CviAII CATG 2 cut(s) 53, 115
CviJI RGCY 6 cut(s) 8, 23, 121, 268, 329, 348
CviKI_1 RGCY 6 cut(s) 8, 23, 121, 268, 329, 348
CviQI GTAC 2 cut(s) 405, 415
DdeI CTNAG 2 cut(s) 63, 426
DriI GACNNNNNGTC 1 cut(s) 130
Eam1105I GACNNNNNGTC 1 cut(s) 130
Eco130I CCWWGG 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 26
Eco88I CYCGRG 1 cut(s) 410
EcoT14I CCWWGG 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 2 cut(s) 56, 118
FaiI YATR 9 cut(s) 54, 101, 116, 131, 170, 258, 275, 384, 386
FalI AAGNNNNNCTT 2 cut(s) 195, 227
FaqI GGGAC 2 cut(s) 12, 52
FatI CATG 2 cut(s) 52, 114
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 231
FokI GGATG 1 cut(s) 299
Fsp4HI GCNGC 1 cut(s) 231
GluI GCNGC 1 cut(s) 231
HaeIII GGCC 1 cut(s) 348
HapII CCGG 1 cut(s) 411
HgaI GACGC 1 cut(s) 236
Hin1II CATG 2 cut(s) 56, 118
HinfI GANTC 2 cut(s) 163, 379
HpaII CCGG 1 cut(s) 411
Hpy166II GTNNAC 1 cut(s) 226
Hpy188I TCNGA 3 cut(s) 66, 82, 340
Hpy188III TCNNGA 3 cut(s) 53, 160, 354
Hpy8I GTNNAC 1 cut(s) 226
HpyCH4V TGCA 2 cut(s) 153, 233
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 227
HpyF3I CTNAG 2 cut(s) 63, 426
Hsp92II CATG 2 cut(s) 56, 118
KpnI GGTACC 1 cut(s) 418
LmnI GCTCC 1 cut(s) 118
LpnPI CCDG 9 cut(s) 9, 21, 107, 173, 268, 367, 378, 387, 424
Lsp1109I GCAGC 1 cut(s) 217
MaeIII GTNAC 1 cut(s) 376
MboII GAAGA 1 cut(s) 215
MluCI AATT 4 cut(s) 154, 181, 276, 358
MlyI GAGTC 1 cut(s) 373
MnlI CCTC 3 cut(s) 49, 76, 166
MseI TTAA 1 cut(s) 180
MslI CAYNNNNRTG 1 cut(s) 285
MspI CCGG 1 cut(s) 411
MspR9I CCNGG 2 cut(s) 411, 412
Mva1269I GAATGC 1 cut(s) 73
MwoI GCNNNNNNNGC 2 cut(s) 68, 227
NciI CCSGG 2 cut(s) 411, 412
NcoI CCATGG 1 cut(s) 114
NlaIII CATG 2 cut(s) 56, 118
NlaIV GGNNCC 2 cut(s) 28, 416
NmuCI GTSAC 1 cut(s) 376
NspV TTCGAA 1 cut(s) 214
PagI TCATGA 1 cut(s) 52
PctI GAATGC 1 cut(s) 73
PfeI GAWTC 1 cut(s) 163
PkrI GCNGC 1 cut(s) 232
PleI GAGTC 1 cut(s) 373
PpsI GAGTC 1 cut(s) 373
PshBI ATTAAT 1 cut(s) 180
PspN4I GGNNCC 2 cut(s) 28, 416
PspPI GGNCC 1 cut(s) 26
RsaI GTAC 2 cut(s) 406, 416
RsaNI GTAC 2 cut(s) 405, 415
RseI CAYNNNNRTG 1 cut(s) 285
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 1 cut(s) 231
Sau96I GGNCC 1 cut(s) 26
SchI GAGTC 1 cut(s) 373
ScrFI CCNGG 2 cut(s) 411, 412
SetI ASST 6 cut(s) 60, 123, 177, 274, 375, 420
SfcI CTRYAG 1 cut(s) 168
SfuI TTCGAA 1 cut(s) 214
SinI GGWCC 1 cut(s) 26
SmaI CCCGGG 1 cut(s) 412
SmiMI CAYNNNNRTG 1 cut(s) 285
Sse9I AATT 4 cut(s) 154, 181, 276, 358
StyD4I CCNGG 2 cut(s) 409, 410
StyI CCWWGG 1 cut(s) 114
TaqI TCGA 1 cut(s) 214
TasI AATT 4 cut(s) 154, 181, 276, 358
TfiI GAWTC 1 cut(s) 163
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TseFI GTSAC 1 cut(s) 376
TseI GCWGC 1 cut(s) 230
Tsp45I GTSAC 1 cut(s) 376
TspMI CCCGGG 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 26
VspI ATTAAT 1 cut(s) 180
XapI RAATTY 1 cut(s) 358
XmaI CCCGGG 1 cut(s) 410
XmiI GTMKAC 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.