Rw0G019750

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00889
Physical Location & Seq
Forward (+)
100472 .. 101190
719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G019750.1

Sequence Viewer

Length: 627 bp
ATGTCAGGGACGTTCAGGCAATTCCTCTTTCCACTGATTGCTGGGTTTGCTCTTATGCTCGTAGTTCATGCCCAAGATCAAACAGGCTTCATTAGCATCGACTGTGGGATTCAGGAGAACTCCAGCTATTCTGAGAAGACAACAGAAATTAACTACATTTCAGATGCTACCTTCATAGACACTGGTGAAAGAGAATTGGTATTGCCTGCTAACAGAAACAACTACCAACAGCCGTACTGGTCTCTTAGGAGCTTCCCTCAAGGAACCAGGAACTGCTACAAAATAATTGTTGAAAGTGCCACCAGATATCTGATCAGAGCCAGCTTCTTTTATGGGAATTATGATGGAGAAAACAAATTGCCACAATTTGAACTACATCTTGGACCTAATTTGTGGGATTTAGTGAGTTTGACCGATGCCTCTAATCCCACAACCAAGGAGCTCATACACAATGTCCCAGCTAACACAACATATATACATGTTTGTCTGGTGAACACAGGCTCTGGGGTTCCATTTATATCAATAATTGAACTCAGGCCTTTGCCCAGTTCAACATATCAGACAGAAATGGGGTCTTTAGGACTTTATGTGCGGCTTGACACTGGTCAATATACGGTTCTATTATGA

Protein Analysis

208

Amino Acids

23.44

Weight (kDa)

5.14

Isoelectric Point (pI)

42.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 33 - 204 2.7e-64 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 592
AfaI GTAC 1 cut(s) 236
AflIII ACRYGT 1 cut(s) 478
AgsI TTSAA 4 cut(s) 293, 371, 530, 552
AjnI CCWGG 1 cut(s) 266
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AluBI AGCT 5 cut(s) 126, 252, 324, 442, 461
AluI AGCT 5 cut(s) 126, 252, 324, 442, 461
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 1 cut(s) 246
AlwNI CAGNNNCTG 2 cut(s) 273, 503
AoxI GGCC 1 cut(s) 536
AspS9I GGNCC 1 cut(s) 383
AsuHPI GGTGA 2 cut(s) 197, 502
AvaII GGWCC 1 cut(s) 383
BanII GRGCYC 1 cut(s) 444
BbsI GAAGAC 1 cut(s) 143
Bbv12I GWGCWC 1 cut(s) 444
BccI CCATC 1 cut(s) 338
BceAI ACGGC 1 cut(s) 217
BciT130I CCWGG 1 cut(s) 268
BclI TGATCA 1 cut(s) 312
BcoDI GTCTC 1 cut(s) 246
BisI GCNGC 1 cut(s) 593
BlsI GCNGC 1 cut(s) 594
Bme1390I CCNGG 1 cut(s) 268
Bme18I GGWCC 1 cut(s) 383
BmgT120I GGNCC 1 cut(s) 383
BmiI GGNNCC 2 cut(s) 265, 510
BmrFI CCNGG 1 cut(s) 268
BmrI ACTGGG 1 cut(s) 540
BmsI GCATC 3 cut(s) 105, 154, 406
BmuI ACTGGG 1 cut(s) 540
BoxI GACNNNNGTC 1 cut(s) 603
BpiI GAAGAC 1 cut(s) 143
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpmI CTGGAG 1 cut(s) 106
BpuEI CTTGAG 1 cut(s) 243
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 1 cut(s) 435
Bse1I ACTGG 4 cut(s) 187, 242, 546, 607
BseBI CCWGG 1 cut(s) 268
BseDI CCNNGG 1 cut(s) 435
BseMII CTCAG 2 cut(s) 123, 547
BseNI ACTGG 4 cut(s) 187, 242, 546, 607
BseYI CCCAGC 2 cut(s) 41, 457
BshFI GGCC 1 cut(s) 538
BsiHKAI GWGCWC 1 cut(s) 444
BslFI GGGAC 2 cut(s) 22, 440
BsmAI GTCTC 1 cut(s) 246
BsmFI GGGAC 2 cut(s) 22, 440
BsnI GGCC 1 cut(s) 538
Bso31I GGTCTC 1 cut(s) 246
Bsp1286I GDGCHC 1 cut(s) 444
Bsp143I GATC 2 cut(s) 76, 312
BspACI CCGC 1 cut(s) 592
BspANI GGCC 1 cut(s) 538
BspCNI CTCAG 2 cut(s) 124, 546
BspLI GGNNCC 2 cut(s) 265, 510
BspTNI GGTCTC 1 cut(s) 246
BsrI ACTGG 4 cut(s) 187, 242, 546, 607
BssECI CCNNGG 1 cut(s) 435
BssMI GATC 2 cut(s) 76, 312
BssT1I CCWWGG 1 cut(s) 435
Bst2UI CCWGG 1 cut(s) 268
Bst4CI ACNGT 2 cut(s) 104, 616
BstC8I GCNNGC 2 cut(s) 207, 322
BstDEI CTNAG 3 cut(s) 132, 245, 533
BstKTI GATC 2 cut(s) 79, 315
BstMAI GTCTC 1 cut(s) 246
BstMBI GATC 2 cut(s) 76, 312
BstMWI GCNNNNNNNGC 2 cut(s) 47, 93
BstNI CCWGG 1 cut(s) 268
BstNSI RCATGY 1 cut(s) 482
BstPAI GACNNNNGTC 1 cut(s) 603
BstSCI CCNGG 1 cut(s) 266
BstV2I GAAGAC 1 cut(s) 143
BsuRI GGCC 1 cut(s) 538
BtsIMutI CAGTG 3 cut(s) 32, 180, 600
Cac8I GCNNGC 2 cut(s) 207, 322
CaiI CAGNNNCTG 2 cut(s) 273, 503
Cfr13I GGNCC 1 cut(s) 383
Csp6I GTAC 1 cut(s) 235
CviAII CATG 2 cut(s) 68, 479
CviQI GTAC 1 cut(s) 235
DdeI CTNAG 3 cut(s) 132, 245, 533
DpnI GATC 2 cut(s) 78, 314
DpnII GATC 2 cut(s) 76, 312
Ecl136II GAGCTC 1 cut(s) 442
Eco130I CCWWGG 1 cut(s) 435
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 1 cut(s) 444
Eco31I GGTCTC 1 cut(s) 246
Eco32I GATATC 1 cut(s) 308
Eco47I GGWCC 1 cut(s) 383
Eco53kI GAGCTC 1 cut(s) 442
EcoICRI GAGCTC 1 cut(s) 442
EcoRII CCWGG 1 cut(s) 266
EcoRV GATATC 1 cut(s) 308
EcoT14I CCWWGG 1 cut(s) 435
EcoT38I GRGCYC 1 cut(s) 444
ErhI CCWWGG 1 cut(s) 435
FaeI CATG 2 cut(s) 71, 482
FaqI GGGAC 2 cut(s) 22, 440
FatI CATG 2 cut(s) 67, 478
FbaI TGATCA 1 cut(s) 312
Fnu4HI GCNGC 1 cut(s) 593
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 1 cut(s) 593
GluI GCNGC 1 cut(s) 593
GsaI CCCAGC 2 cut(s) 45, 461
GsuI CTGGAG 1 cut(s) 106
HaeIII GGCC 1 cut(s) 538
Hin1II CATG 2 cut(s) 71, 482
HinfI GANTC 1 cut(s) 109
HphI GGTGA 2 cut(s) 197, 502
Hpy166II GTNNAC 1 cut(s) 493
Hpy188I TCNGA 5 cut(s) 133, 163, 312, 317, 561
Hpy188III TCNNGA 1 cut(s) 113
Hpy8I GTNNAC 1 cut(s) 493
HpyAV CCTTC 1 cut(s) 181
HpyCH4III ACNGT 2 cut(s) 104, 616
HpyCH4IV ACGT 1 cut(s) 11
HpyF10VI GCNNNNNNNGC 2 cut(s) 47, 93
HpyF3I CTNAG 3 cut(s) 132, 245, 533
HpySE526I ACGT 1 cut(s) 11
Hsp92II CATG 2 cut(s) 71, 482
Ksp22I TGATCA 1 cut(s) 312
Kzo9I GATC 2 cut(s) 76, 312
LmnI GCTCC 2 cut(s) 249, 439
LweI GCATC 3 cut(s) 105, 154, 406
MaeII ACGT 1 cut(s) 11
MalI GATC 2 cut(s) 78, 314
MboI GATC 2 cut(s) 76, 312
MboII GAAGA 1 cut(s) 148
MhlI GDGCHC 1 cut(s) 444
MluCI AATT 9 cut(s) 20, 147, 194, 285, 337, 356, 365, 388, 525
MnlI CCTC 3 cut(s) 35, 267, 430
MseI TTAA 1 cut(s) 150
MspR9I CCNGG 1 cut(s) 268
MvaI CCWGG 1 cut(s) 268
MwoI GCNNNNNNNGC 2 cut(s) 47, 93
NdeII GATC 2 cut(s) 76, 312
NlaIII CATG 2 cut(s) 71, 482
NlaIV GGNNCC 2 cut(s) 265, 510
NspI RCATGY 1 cut(s) 482
PceI AGGCCT 1 cut(s) 538
PciI ACATGT 1 cut(s) 478
PfeI GAWTC 1 cut(s) 109
PkrI GCNGC 1 cut(s) 594
PscI ACATGT 1 cut(s) 478
PshAI GACNNNNGTC 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 444
Psp6I CCWGG 1 cut(s) 266
PspFI CCCAGC 2 cut(s) 41, 457
PspGI CCWGG 1 cut(s) 266
PspN4I GGNNCC 2 cut(s) 265, 510
PspPI GGNCC 1 cut(s) 383
PstNI CAGNNNCTG 2 cut(s) 273, 503
RsaI GTAC 1 cut(s) 236
RsaNI GTAC 1 cut(s) 235
SacI GAGCTC 1 cut(s) 444
SaqAI TTAA 1 cut(s) 150
SatI GCNGC 1 cut(s) 593
Sau3AI GATC 2 cut(s) 76, 312
Sau96I GGNCC 1 cut(s) 383
ScrFI CCNGG 1 cut(s) 268
SduI GDGCHC 1 cut(s) 444
SetI ASST 8 cut(s) 14, 128, 173, 254, 326, 388, 444, 463
SfaNI GCATC 3 cut(s) 105, 154, 406
SinI GGWCC 1 cut(s) 383
SmlI CTYRAG 1 cut(s) 258
SmoI CTYRAG 1 cut(s) 258
Sse9I AATT 9 cut(s) 20, 147, 194, 285, 337, 356, 365, 388, 525
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 1 cut(s) 592
SstI GAGCTC 1 cut(s) 444
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 1 cut(s) 266
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 2 cut(s) 104, 616
TaiI ACGT 1 cut(s) 14
TaqI TCGA 1 cut(s) 99
TaqII GACCGA 1 cut(s) 428
TasI AATT 9 cut(s) 20, 147, 194, 285, 337, 356, 365, 388, 525
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 1 cut(s) 109
Tru1I TTAA 1 cut(s) 150
Tru9I TTAA 1 cut(s) 150
TscAI CASTG 3 cut(s) 39, 187, 607
TspDTI ATGAA 3 cut(s) 56, 79, 163
TspRI CASTG 3 cut(s) 39, 187, 607
VpaK11BI GGWCC 1 cut(s) 383
XceI RCATGY 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.