Rmu_sc0007208.1_g000003

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007208.1
OG0000083
Physical Location & Seq
Reverse (-)
12717 .. 16759
4043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007208.1_g000003.1.cds

Sequence Viewer

Length: 2142 bp
atgtcagggattttcaagcaattcctggctccactgcttgctggttttgctcttatgctcttagttcatgcgcaggatcaaacaggcttcatcagcatagattgcggccttgcggagaattccacctattctgaaaagataacaaccatcgactacatttcagatgcaaccttcatagacactggtgaaagaaagttggtattgcctgaaaacagaaacggctaccaacaaccttactggtctcttaggagctttcctcaaggaaccaggaactgctacaaaataaatgttaaaagtggcaccagatacttgatcagagccagtttcttttatgggaactatgatggagaaaacaaattgccagagtttgaactacatcttggatctaatttgtgggacttggtcagtctggaagatgcatccagttccacaagcaaggagctcatacattttgtcccagctaagagaagctatctacatgtttgtgttgtggatacaggctccggggttccatttatatcaaaaatagaactgaggcctttgccatatacaacttatcaaacagaaacagggtccttaggactttatgtgcggcttgacactggtcaatcaccatcgaattatacagaatataggtttccagttgatattcatgatcgattgtggcataactatgcccaaagtgattggacacaaattagtaccttatccaccacattcaagtctgcacctgataatgattacaacccaccatctattgtaatgcgtacagctgccacaccgaaacttgaaagtgataacttgagtttctactggctgcctactgatccaagtgcagaattttatttatacatgcacttttcagaagttgtagagctccaagccaaccagtctagacagcttgatattacttggaatggagagcactactatgggccatttgttcctaatttcttcgacaccacaacggttttgagtactaaagctttgactggaggaaaatataatttttcaatctcaaacccagatgggaactccgtccttcaacccatcctcaatggaatcgagatctaccagctaaaagaattcttacaaatagaaacgaaacaagaagatggagctgccatatatgaaaaaccccactttccgtcactggaactggagcaaaaaaaccgacagtttacatactgtgagatcctcaagttcactaacaatttggagaggactcttggaaaaggtggatttggaacagtttaccatggatatattgacaaacttcaagtagctgtcaagatgctttctccatcatcaattcaagggttccaagaatttcatgcagaggttaatcttcttttgagagttcatcacacgaacttgacaagccttgttggatattgcaatgatgaaaacaatatggggctcgtctatgagtacatggccaatggaaacttacaagaacatctttcagatagcagtacaaatattttgggctgggaagataggcttagaatagcagcagatgccgcacaaggattggagtatctgcactatggttgtaagccacctataattcacagggatgtgaaatcagcaaacatcttgttaactgagaacttccaagccaaagtatctgattttggcctatccagaaatttccctacagatggtggaactcatatatcgacagttgttgctggaactcccgggtatcttgaccctgagtactacttaacaagcaggttaaacgagaaaagtgatacttatagctttgggattgtgctgttggagattatcacaagtcgacctgttataacaggaacgcttgagaggattcacattagccaatgggttggtttcatgcttgcgcagggtgacattaacagtattgttgatccgagattagagagaaatttcaatgtcaactccgtctggaaagttgtggagatagcaatggcatgcgtgtctccaaacgccaccaaaaggccaatgatgagtcaggtactgatggaactgaaggagtgcatggctacggaagaactgtctcagaaaaagcagatggaatatgaaactgaattaggagaaccagttgagatggtgtctctaaatgattctatcagaatgctacgtccctcagttaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

713

Amino Acids

80.79

Weight (kDa)

5.25

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1811
Acc16I TGCGCA 2 cut(s) 72, 1866
Acc36I ACCTGC 1 cut(s) 1728
AccB1I GGYRCC 1 cut(s) 299
AccI GTMKAC 1 cut(s) 1801
AciI CCGC 4 cut(s) 105, 113, 592, 1524
AclWI GGATC 5 cut(s) 84, 391, 821, 1189, 1886
AcoI YGGCCR 1 cut(s) 1437
AcsI RAATTY 6 cut(s) 118, 839, 1085, 1328, 1651, 1909
AcuI CTGAAG 1 cut(s) 2033
AfaI GTAC 7 cut(s) 703, 769, 979, 1433, 1477, 1724, 2001
AfiI CCNNNNNNNGG 3 cut(s) 1664, 1980, 2136
AflIII ACRYGT 1 cut(s) 478
AgsI TTSAA 9 cut(s) 16, 371, 721, 791, 1014, 1046, 1280, 1316, 1915
AjnI CCWGG 2 cut(s) 24, 266
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
Alw21I GWGCWC 3 cut(s) 444, 879, 927
Alw26I GTCTC 4 cut(s) 246, 1968, 2046, 2103
AlwI GGATC 5 cut(s) 84, 391, 821, 1189, 1886
AlwNI CAGNNNCTG 2 cut(s) 273, 2002
Ama87I CYCGRG 1 cut(s) 1703
AoxI GGCC 6 cut(s) 106, 536, 935, 1437, 1639, 1982
ApeKI GCWGC 4 cut(s) 773, 817, 1121, 1514
ApoI RAATTY 6 cut(s) 118, 839, 1085, 1328, 1651, 1909
AspLEI GCGC 2 cut(s) 73, 1867
AspS9I GGNCC 2 cut(s) 573, 935
AsuC2I CCSGG 3 cut(s) 505, 1704, 1705
AsuHPI GGTGA 3 cut(s) 197, 603, 1883
AvaI CYCGRG 1 cut(s) 1703
AvaII GGWCC 1 cut(s) 573
AxyI CCTNAGG 1 cut(s) 577
BalI TGGCCA 1 cut(s) 1439
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 3 cut(s) 444, 879, 1422
Bbv12I GWGCWC 3 cut(s) 444, 879, 927
BbvI GCAGC 4 cut(s) 760, 804, 1108, 1526
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 2 cut(s) 26, 268
BciVI GTATCC 1 cut(s) 487
BclI TGATCA 1 cut(s) 312
BcnI CCSGG 3 cut(s) 505, 1704, 1705
BcoDI GTCTC 4 cut(s) 246, 1968, 2046, 2103
BfaI CTAG 1 cut(s) 894
BfmI CTRYAG 1 cut(s) 1659
BfuAI ACCTGC 1 cut(s) 1728
BfuI GTATCC 1 cut(s) 487
BglII AGATCT 1 cut(s) 1068
BisI GCNGC 7 cut(s) 106, 593, 774, 818, 1122, 1515, 1524
BlsI GCNGC 7 cut(s) 107, 594, 775, 819, 1123, 1516, 1525
BmcAI AGTACT 2 cut(s) 979, 1724
Bme1390I CCNGG 5 cut(s) 26, 268, 505, 1704, 1705
Bme18I GGWCC 1 cut(s) 573
BmeT110I CYCGRG 1 cut(s) 1703
BmgT120I GGNCC 2 cut(s) 573, 935
BmiI GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1322
BmrFI CCNGG 5 cut(s) 26, 268, 505, 1704, 1705
BmsI GCATC 5 cut(s) 154, 406, 428, 1284, 1510
BoxI GACNNNNGTC 1 cut(s) 603
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpmI CTGGAG 2 cut(s) 1014, 1181
BpuEI CTTGAG 4 cut(s) 243, 823, 1184, 1844
BpuMI CCSGG 3 cut(s) 505, 1704, 1705
Bsa29I ATCGAT 1 cut(s) 658
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 3 cut(s) 504, 1258, 1703
BsaXI ACNNNNNCTCC 2 cut(s) 2070, 2100
Bsc4I CCNNNNNNNGG 3 cut(s) 1664, 1980, 2136
Bse21I CCTNAGG 1 cut(s) 577
Bse3DI GCAATG 2 cut(s) 1405, 1956
BseBI CCWGG 2 cut(s) 26, 268
BseCI ATCGAT 1 cut(s) 658
BseDI CCNNGG 3 cut(s) 504, 1258, 1703
BseGI GGATG 3 cut(s) 419, 1050, 1585
BseLI CCNNNNNNNGG 3 cut(s) 1664, 1980, 2136
BseMI GCAATG 2 cut(s) 1405, 1956
BseMII CTCAG 4 cut(s) 524, 1599, 1710, 2057
BseXI GCAGC 4 cut(s) 760, 804, 1108, 1526
BseYI CCCAGC 2 cut(s) 457, 1491
BsgI GTGCAG 3 cut(s) 711, 855, 1529
BshFI GGCC 6 cut(s) 108, 538, 937, 1439, 1641, 1984
BshNI GGYRCC 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 658
BsiHKAI GWGCWC 3 cut(s) 444, 879, 927
BsiHKCI CYCGRG 1 cut(s) 1703
BsiSI CCGG 2 cut(s) 504, 1704
BslFI GGGAC 3 cut(s) 410, 440, 2112
BslI CCNNNNNNNGG 3 cut(s) 1664, 1980, 2136
BsmAI GTCTC 4 cut(s) 246, 1968, 2046, 2103
BsmFI GGGAC 3 cut(s) 410, 440, 2112
BsmI GAATGC 1 cut(s) 2124
BsnI GGCC 6 cut(s) 108, 538, 937, 1439, 1641, 1984
Bso31I GGTCTC 1 cut(s) 246
BsoBI CYCGRG 1 cut(s) 1703
Bsp1286I GDGCHC 4 cut(s) 444, 879, 927, 1422
Bsp143I GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
Bsp19I CCATGG 1 cut(s) 1258
BspACI CCGC 4 cut(s) 105, 113, 592, 1524
BspANI GGCC 6 cut(s) 108, 538, 937, 1439, 1641, 1984
BspCNI CTCAG 4 cut(s) 525, 1600, 1711, 2056
BspDI ATCGAT 1 cut(s) 658
BspHI TCATGA 1 cut(s) 652
BspLI GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1322
BspMI ACCTGC 1 cut(s) 1728
BspPI GGATC 5 cut(s) 84, 391, 821, 1189, 1886
BspT107I GGYRCC 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 246
BsrDI GCAATG 2 cut(s) 1405, 1956
BssECI CCNNGG 3 cut(s) 504, 1258, 1703
BssMI GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
BssT1I CCWWGG 1 cut(s) 1258
Bst2UI CCWGG 2 cut(s) 26, 268
Bst4CI ACNGT 7 cut(s) 970, 1179, 1190, 1252, 1687, 1883, 2040
BstAPI GCANNNNNTGC 2 cut(s) 102, 1520
BstC8I GCNNGC 3 cut(s) 39, 1863, 1957
BstDSI CCRYGG 1 cut(s) 1258
BstENI CCTNNNNNAGG 1 cut(s) 2134
BstF5I GGATG 3 cut(s) 419, 1050, 1585
BstHHI GCGC 2 cut(s) 73, 1867
BstKTI GATC 8 cut(s) 79, 315, 386, 658, 829, 1071, 1197, 1894
BstMAI GTCTC 4 cut(s) 246, 1968, 2046, 2103
BstMBI GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
BstMWI GCNNNNNNNGC 5 cut(s) 47, 93, 102, 1520, 1523
BstNI CCWGG 2 cut(s) 26, 268
BstNSI RCATGY 3 cut(s) 482, 856, 1959
BstPAI GACNNNNGTC 1 cut(s) 603
BstSCI CCNGG 5 cut(s) 24, 266, 503, 1702, 1703
BstSFI CTRYAG 1 cut(s) 1659
BstV1I GCAGC 4 cut(s) 760, 804, 1108, 1526
BstX2I RGATCY 3 cut(s) 383, 1068, 1194
BstXI CCANNNNNNTGG 1 cut(s) 1850
BstYI RGATCY 3 cut(s) 383, 1068, 1194
Bsu15I ATCGAT 1 cut(s) 658
Bsu36I CCTNAGG 1 cut(s) 577
BsuI GTATCC 1 cut(s) 487
BsuRI GGCC 6 cut(s) 108, 538, 937, 1439, 1641, 1984
BsuTUI ATCGAT 1 cut(s) 658
BtgI CCRYGG 1 cut(s) 1258
BtsCI GGATG 3 cut(s) 419, 1050, 1585
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 4 cut(s) 32, 180, 600, 1151
BveI ACCTGC 1 cut(s) 1728
Cac8I GCNNGC 3 cut(s) 39, 1863, 1957
CaiI CAGNNNCTG 2 cut(s) 273, 2002
CciI TCATGA 1 cut(s) 652
CfoI GCGC 2 cut(s) 73, 1867
Cfr13I GGNCC 2 cut(s) 573, 935
Cfr9I CCCGGG 1 cut(s) 1703
ClaI ATCGAT 1 cut(s) 658
Csp6I GTAC 7 cut(s) 702, 768, 978, 1432, 1476, 1723, 2000
CviQI GTAC 7 cut(s) 702, 768, 978, 1432, 1476, 1723, 2000
DpnI GATC 8 cut(s) 78, 314, 385, 657, 828, 1070, 1196, 1893
DpnII GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
EaeI YGGCCR 1 cut(s) 1437
Ecl136II GAGCTC 2 cut(s) 442, 877
Eco130I CCWWGG 1 cut(s) 1258
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 3 cut(s) 444, 879, 1422
Eco31I GGTCTC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 573
Eco53kI GAGCTC 2 cut(s) 442, 877
Eco57I CTGAAG 1 cut(s) 2033
Eco81I CCTNAGG 1 cut(s) 577
Eco88I CYCGRG 1 cut(s) 1703
EcoICRI GAGCTC 2 cut(s) 442, 877
EcoNI CCTNNNNNAGG 1 cut(s) 2134
EcoO109I RGGNCCY 1 cut(s) 573
EcoRI GAATTC 2 cut(s) 118, 1085
EcoRII CCWGG 2 cut(s) 24, 266
EcoT14I CCWWGG 1 cut(s) 1258
EcoT22I ATGCAT 1 cut(s) 421
EcoT38I GRGCYC 3 cut(s) 444, 879, 1422
ErhI CCWWGG 1 cut(s) 1258
FalI AAGNNNNNCTT 6 cut(s) 1446, 1478, 1488, 1520, 1744, 1776
FaqI GGGAC 3 cut(s) 410, 440, 2112
FbaI TGATCA 1 cut(s) 312
FblI GTMKAC 1 cut(s) 1801
Fnu4HI GCNGC 7 cut(s) 106, 593, 774, 818, 1122, 1515, 1524
FokI GGATG 3 cut(s) 406, 1037, 1592
FriOI GRGCYC 3 cut(s) 444, 879, 1422
Fsp4HI GCNGC 7 cut(s) 106, 593, 774, 818, 1122, 1515, 1524
FspBI CTAG 1 cut(s) 894
FspI TGCGCA 2 cut(s) 72, 1866
GlaI GCGC 2 cut(s) 72, 1866
GluI GCNGC 7 cut(s) 106, 593, 774, 818, 1122, 1515, 1524
GsaI CCCAGC 2 cut(s) 461, 1495
GsuI CTGGAG 2 cut(s) 1014, 1181
HaeIII GGCC 6 cut(s) 108, 538, 937, 1439, 1641, 1984
HapII CCGG 2 cut(s) 504, 1704
HhaI GCGC 2 cut(s) 73, 1867
Hin6I GCGC 2 cut(s) 71, 1865
HinP1I GCGC 2 cut(s) 71, 1865
HincII GTYRAC 3 cut(s) 1605, 1802, 1921
HindII GTYRAC 3 cut(s) 1605, 1802, 1921
HindIII AAGCTT 1 cut(s) 984
HinfI GANTC 5 cut(s) 1062, 1225, 1831, 1993, 2108
HpaI GTTAAC 1 cut(s) 1605
HpaII CCGG 2 cut(s) 504, 1704
HphI GGTGA 3 cut(s) 197, 603, 1883
Hpy166II GTNNAC 6 cut(s) 1182, 1206, 1255, 1605, 1802, 1921
Hpy188I TCNGA 9 cut(s) 133, 163, 317, 865, 1468, 1633, 1896, 2046, 2117
Hpy188III TCNNGA 8 cut(s) 410, 653, 894, 1066, 1291, 1647, 1712, 1930
Hpy8I GTNNAC 6 cut(s) 1182, 1206, 1255, 1605, 1802, 1921
HpyAV CCTTC 3 cut(s) 181, 1052, 2008
HpyCH4III ACNGT 7 cut(s) 970, 1179, 1190, 1252, 1687, 1883, 2040
HpyCH4IV ACGT 1 cut(s) 2125
HpyCH4V TGCA 9 cut(s) 167, 419, 728, 836, 856, 1337, 1398, 1546, 2022
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 93, 102, 1520, 1523
HpySE526I ACGT 1 cut(s) 2125
HspAI GCGC 2 cut(s) 71, 1865
Ksp22I TGATCA 1 cut(s) 312
KspAI GTTAAC 1 cut(s) 1605
Kzo9I GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
LmnI GCTCC 7 cut(s) 34, 249, 439, 506, 882, 1118, 1162
Lsp1109I GCAGC 4 cut(s) 760, 804, 1108, 1526
LweI GCATC 5 cut(s) 154, 406, 428, 1284, 1510
MaeI CTAG 1 cut(s) 894
MaeII ACGT 1 cut(s) 2125
MaeIII GTNAC 2 cut(s) 1149, 1871
MalI GATC 8 cut(s) 78, 314, 385, 657, 828, 1070, 1196, 1893
MboI GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
MboII GAAGA 6 cut(s) 425, 946, 1124, 1340, 1508, 2045
MflI RGATCY 3 cut(s) 383, 1068, 1194
MhlI GDGCHC 4 cut(s) 444, 879, 927, 1422
MlsI TGGCCA 1 cut(s) 1439
MluNI TGGCCA 1 cut(s) 1439
MlyI GAGTC 2 cut(s) 1219, 2002
MmeI TCCRAC 2 cut(s) 1369, 1764
MnlI CCTC 9 cut(s) 267, 528, 989, 1064, 1208, 1215, 1333, 1821, 2140
Mox20I TGGCCA 1 cut(s) 1439
Mph1103I ATGCAT 1 cut(s) 421
MscI TGGCCA 1 cut(s) 1439
MseI TTAA 6 cut(s) 291, 1344, 1604, 1730, 1742, 1878
MslI CAYNNNNRTG 4 cut(s) 483, 672, 930, 1578
Msp20I TGGCCA 1 cut(s) 1439
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 2 cut(s) 504, 1704
MspR9I CCNGG 5 cut(s) 26, 268, 505, 1704, 1705
Mva1269I GAATGC 1 cut(s) 2124
MvaI CCWGG 2 cut(s) 26, 268
MwoI GCNNNNNNNGC 5 cut(s) 47, 93, 102, 1520, 1523
NciI CCSGG 3 cut(s) 505, 1704, 1705
NcoI CCATGG 1 cut(s) 1258
NdeII GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
NlaIV GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1322
NmuCI GTSAC 2 cut(s) 1149, 1871
NsbI TGCGCA 2 cut(s) 72, 1866
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 3 cut(s) 482, 856, 1959
PaeI GCATGC 1 cut(s) 1959
PagI TCATGA 1 cut(s) 652
PceI AGGCCT 1 cut(s) 538
PciI ACATGT 1 cut(s) 478
PctI GAATGC 1 cut(s) 2124
PfeI GAWTC 3 cut(s) 1062, 1831, 2108
PflFI GACNNNGTC 1 cut(s) 401
PkrI GCNGC 7 cut(s) 107, 594, 775, 819, 1123, 1516, 1525
PleI GAGTC 2 cut(s) 1219, 2001
PpsI GAGTC 2 cut(s) 1219, 2001
PpuMI RGGWCCY 1 cut(s) 573
PscI ACATGT 1 cut(s) 478
PshAI GACNNNNGTC 1 cut(s) 603
PsiI TTATAA 1 cut(s) 1811
Psp124BI GAGCTC 2 cut(s) 444, 879
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 2 cut(s) 24, 266
PspFI CCCAGC 2 cut(s) 457, 1491
PspGI CCWGG 2 cut(s) 24, 266
PspN4I GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1322
PspPI GGNCC 2 cut(s) 573, 935
PspPPI RGGWCCY 1 cut(s) 573
PstNI CAGNNNCTG 2 cut(s) 273, 2002
PsuI RGATCY 3 cut(s) 383, 1068, 1194
PsyI GACNNNGTC 1 cut(s) 401
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 7 cut(s) 703, 769, 979, 1433, 1477, 1724, 2001
RsaNI GTAC 7 cut(s) 702, 768, 978, 1432, 1476, 1723, 2000
RseI CAYNNNNRTG 4 cut(s) 483, 672, 930, 1578
SacI GAGCTC 2 cut(s) 444, 879
SalI GTCGAC 1 cut(s) 1800
SaqAI TTAA 6 cut(s) 291, 1344, 1604, 1730, 1742, 1878
SatI GCNGC 7 cut(s) 106, 593, 774, 818, 1122, 1515, 1524
Sau3AI GATC 8 cut(s) 76, 312, 383, 655, 826, 1068, 1194, 1891
Sau96I GGNCC 2 cut(s) 573, 935
ScaI AGTACT 2 cut(s) 979, 1724
SchI GAGTC 2 cut(s) 1219, 2002
ScrFI CCNGG 5 cut(s) 26, 268, 505, 1704, 1705
SduI GDGCHC 4 cut(s) 444, 879, 927, 1422
SfaNI GCATC 5 cut(s) 154, 406, 428, 1284, 1510
SfcI CTRYAG 1 cut(s) 1659
SinI GGWCC 1 cut(s) 573
SmaI CCCGGG 1 cut(s) 1705
SmiMI CAYNNNNRTG 4 cut(s) 483, 672, 930, 1578
SmlI CTYRAG 4 cut(s) 258, 802, 1199, 1823
SmoI CTYRAG 4 cut(s) 258, 802, 1199, 1823
SphI GCATGC 1 cut(s) 1959
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 4 cut(s) 105, 113, 592, 1524
SspI AATATT 1 cut(s) 1483
SspMI CTAG 1 cut(s) 894
SstI GAGCTC 2 cut(s) 444, 879
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 5 cut(s) 24, 266, 503, 1702, 1703
StyI CCWWGG 1 cut(s) 1258
TaaI ACNGT 7 cut(s) 970, 1179, 1190, 1252, 1687, 1883, 2040
TaiI ACGT 1 cut(s) 2128
TaqI TCGA 7 cut(s) 150, 617, 658, 957, 1065, 1682, 1801
TatI WGTACW 4 cut(s) 977, 1431, 1475, 1722
TauI GCSGC 3 cut(s) 108, 595, 1526
TfiI GAWTC 3 cut(s) 1062, 1831, 2108
Tru1I TTAA 6 cut(s) 291, 1344, 1604, 1730, 1742, 1878
Tru9I TTAA 6 cut(s) 291, 1344, 1604, 1730, 1742, 1878
TscAI CASTG 4 cut(s) 39, 187, 607, 1158
TseFI GTSAC 2 cut(s) 1149, 1871
TseI GCWGC 4 cut(s) 773, 817, 1121, 1514
Tsp45I GTSAC 2 cut(s) 1149, 1871
TspGWI ACGGA 4 cut(s) 1027, 1137, 1915, 2045
TspMI CCCGGG 1 cut(s) 1703
TspRI CASTG 4 cut(s) 39, 187, 607, 1158
Tth111I GACNNNGTC 1 cut(s) 401
VpaK11BI GGWCC 1 cut(s) 573
XagI CCTNNNNNAGG 1 cut(s) 2134
XapI RAATTY 6 cut(s) 118, 839, 1085, 1328, 1651, 1909
XbaI TCTAGA 1 cut(s) 893
XceI RCATGY 3 cut(s) 482, 856, 1959
XmaI CCCGGG 1 cut(s) 1703
XmiI GTMKAC 1 cut(s) 1801
XspI CTAG 1 cut(s) 894
ZrmI AGTACT 2 cut(s) 979, 1724
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.