pycom17g18940

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
16474205 .. 16476278
2074 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g18940.4

Sequence Viewer

Length: 711 bp
ATGGCCAATGGCAACTTACGAACATATCTTTCGGTTTCAGATAGTAGTGCAAGTGTCTTGACTTGGGAAGGTAGACTTCAAATAGCAATAGATTCTGCACAAGTATTGGAGTATCTACACTATGGCTGTAAGCCACCCATAATCCACAGGGATGTAAAATCATCAAACACCTTGCTCAATGAAAATTTCCAAACCAAAATATCTGATTTTGGCCTATCCAGAAATTTTCTTACAGAGGATGGTTCGCATATATCGACGCGTGTTGCTGGAACTCCTAGGTACCTTGCCCCTGAGTACTACTTATCAAACAGGTTAAATGAGAAAAGCGACGTCTACAGCCTTGGAGTTGTACTGTTGGAGATTATCACAAGTAAACATGTTTTGTCAAAAACACATGATCACATCAGTGATTGGGTTGTTTTCATGCTTGAAAAGGGAGACATTAACGGGATCTTCGATTCGAGGTTAGAGAGAAACTTCAATATTAGCTCTGGCTGGAAAGCTGTGGAAATAGCAATGGCATGTGTATCTGCAGATGCCACCAAAATGCCTACCATGAGTGAGGTAGCTGTGGGACTAAAGGAGTGTTTGGCAACAGAACTAGCTCGAGAAAAGCAGAGCGGCAATGAAACTGAACTAGGAAGTTCCATTGAGATGGTGTCTAAGATGAATTCCATCTCTATGGAATTGGAAAGTCTCTCAGTTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

237

Amino Acids

26.2

Weight (kDa)

5.42

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 333
Acc65I GGTACC 1 cut(s) 279
AccB1I GGYRCC 1 cut(s) 279
AccBSI CCGCTC 1 cut(s) 621
AccI GTMKAC 2 cut(s) 73, 333
AccII CGCG 1 cut(s) 259
AciI CCGC 1 cut(s) 621
AclWI GGATC 1 cut(s) 458
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 184, 223, 670
AcyI GRCGYC 1 cut(s) 330
AfaI GTAC 3 cut(s) 281, 296, 351
AflIII ACRYGT 2 cut(s) 257, 376
AgsI TTSAA 3 cut(s) 80, 431, 481
AleI CACNNNNGTG 1 cut(s) 405
AluBI AGCT 4 cut(s) 489, 503, 569, 605
AluI AGCT 4 cut(s) 489, 503, 569, 605
Alw26I GTCTC 2 cut(s) 432, 701
AlwI GGATC 1 cut(s) 458
Ama87I CYCGRG 1 cut(s) 606
AoxI GGCC 2 cut(s) 3, 211
ApoI RAATTY 3 cut(s) 184, 223, 670
Asp718I GGTACC 1 cut(s) 279
AspA2I CCTAGG 1 cut(s) 275
AvaI CYCGRG 1 cut(s) 606
AvrII CCTAGG 1 cut(s) 275
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 279
BccI CCATC 3 cut(s) 233, 649, 683
BclI TGATCA 1 cut(s) 397
BcoDI GTCTC 2 cut(s) 432, 701
BfaI CTAG 3 cut(s) 276, 602, 638
BfmI CTRYAG 2 cut(s) 334, 531
BisI GCNGC 1 cut(s) 622
BlnI CCTAGG 1 cut(s) 275
BlsI GCNGC 1 cut(s) 623
BmcAI AGTACT 1 cut(s) 296
BmeT110I CYCGRG 1 cut(s) 606
BmiI GGNNCC 1 cut(s) 281
BmsI GCATC 1 cut(s) 526
BsaHI GRCGYC 1 cut(s) 330
BsaJI CCNNGG 2 cut(s) 275, 340
Bse3DI GCAATG 2 cut(s) 522, 631
BseDI CCNNGG 2 cut(s) 275, 340
BseGI GGATG 2 cut(s) 157, 244
BseMI GCAATG 2 cut(s) 522, 631
BseMII CTCAG 1 cut(s) 282
BsgI GTGCAG 1 cut(s) 81
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 2 cut(s) 5, 213
BshNI GGYRCC 1 cut(s) 279
BsiHKCI CYCGRG 1 cut(s) 606
BslFI GGGAC 1 cut(s) 588
BsmAI GTCTC 2 cut(s) 432, 701
BsmFI GGGAC 1 cut(s) 588
BsnI GGCC 2 cut(s) 5, 213
BsoBI CYCGRG 1 cut(s) 606
Bsp143I GATC 2 cut(s) 397, 450
BspACI CCGC 1 cut(s) 621
BspANI GGCC 2 cut(s) 5, 213
BspCNI CTCAG 1 cut(s) 283
BspFNI CGCG 1 cut(s) 259
BspLI GGNNCC 1 cut(s) 281
BspMAI CTGCAG 1 cut(s) 535
BspPI GGATC 1 cut(s) 458
BspT107I GGYRCC 1 cut(s) 279
BsrBI CCGCTC 1 cut(s) 621
BsrDI GCAATG 2 cut(s) 522, 631
BssECI CCNNGG 2 cut(s) 275, 340
BssMI GATC 2 cut(s) 397, 450
BssNI GRCGYC 1 cut(s) 330
BssT1I CCWWGG 2 cut(s) 275, 340
Bst4CI ACNGT 1 cut(s) 354
BstACI GRCGYC 1 cut(s) 330
BstDEI CTNAG 3 cut(s) 291, 663, 700
BstF5I GGATG 2 cut(s) 157, 244
BstFNI CGCG 1 cut(s) 259
BstKTI GATC 2 cut(s) 400, 453
BstMAI GTCTC 2 cut(s) 432, 701
BstMBI GATC 2 cut(s) 397, 450
BstNSI RCATGY 2 cut(s) 380, 525
BstSFI CTRYAG 2 cut(s) 334, 531
BstUI CGCG 1 cut(s) 259
BstX2I RGATCY 1 cut(s) 450
BstXI CCANNNNNNTGG 2 cut(s) 655, 682
BstYI RGATCY 1 cut(s) 450
BsuRI GGCC 2 cut(s) 5, 213
BtsCI GGATG 2 cut(s) 157, 244
BtsIMutI CAGTG 1 cut(s) 412
CseI GACGC 1 cut(s) 265
Csp6I GTAC 3 cut(s) 280, 295, 350
CviAII CATG 5 cut(s) 377, 395, 424, 522, 556
CviQI GTAC 3 cut(s) 280, 295, 350
DdeI CTNAG 3 cut(s) 291, 663, 700
DpnI GATC 2 cut(s) 399, 452
DpnII GATC 2 cut(s) 397, 450
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 2 cut(s) 275, 340
Eco88I CYCGRG 1 cut(s) 606
EcoRI GAATTC 1 cut(s) 670
EcoT14I CCWWGG 2 cut(s) 275, 340
ErhI CCWWGG 2 cut(s) 275, 340
FaeI CATG 5 cut(s) 380, 398, 427, 525, 559
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FaqI GGGAC 1 cut(s) 588
FatI CATG 5 cut(s) 376, 394, 423, 521, 555
FbaI TGATCA 1 cut(s) 397
FblI GTMKAC 2 cut(s) 73, 333
Fnu4HI GCNGC 1 cut(s) 622
FokI GGATG 2 cut(s) 164, 251
Fsp4HI GCNGC 1 cut(s) 622
FspBI CTAG 3 cut(s) 276, 602, 638
GluI GCNGC 1 cut(s) 622
HaeIII GGCC 2 cut(s) 5, 213
HgaI GACGC 1 cut(s) 265
Hin1I GRCGYC 1 cut(s) 330
Hin1II CATG 5 cut(s) 380, 398, 427, 525, 559
HinfI GANTC 2 cut(s) 92, 458
Hpy166II GTNNAC 3 cut(s) 74, 334, 374
Hpy188I TCNGA 2 cut(s) 40, 205
Hpy188III TCNNGA 3 cut(s) 58, 219, 608
Hpy8I GTNNAC 3 cut(s) 74, 334, 374
Hpy99I CGWCG 2 cut(s) 259, 332
HpyAV CCTTC 1 cut(s) 62
HpyCH4III ACNGT 1 cut(s) 354
HpyCH4IV ACGT 1 cut(s) 330
HpyCH4V TGCA 3 cut(s) 50, 98, 533
HpyF3I CTNAG 3 cut(s) 291, 663, 700
HpySE526I ACGT 1 cut(s) 330
Hsp92I GRCGYC 1 cut(s) 330
Hsp92II CATG 5 cut(s) 380, 398, 427, 525, 559
KpnI GGTACC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 397
Kzo9I GATC 2 cut(s) 397, 450
LpnPI CCDG 7 cut(s) 133, 232, 252, 295, 303, 477, 481
LweI GCATC 1 cut(s) 526
MaeI CTAG 3 cut(s) 276, 602, 638
MaeII ACGT 1 cut(s) 330
MalI GATC 2 cut(s) 399, 452
MbiI CCGCTC 1 cut(s) 621
MboI GATC 2 cut(s) 397, 450
MboII GAAGA 1 cut(s) 445
MflI RGATCY 1 cut(s) 450
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 184, 223, 670, 686
MluI ACGCGT 1 cut(s) 257
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 336
MnlI CCTC 3 cut(s) 229, 456, 556
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 314, 444
MslI CAYNNNNRTG 5 cut(s) 150, 405, 545, 653, 680
Msp20I TGGCCA 1 cut(s) 5
MvnI CGCG 1 cut(s) 259
NdeII GATC 2 cut(s) 397, 450
NlaIII CATG 5 cut(s) 380, 398, 427, 525, 559
NlaIV GGNNCC 1 cut(s) 281
NspI RCATGY 2 cut(s) 380, 525
OliI CACNNNNGTG 1 cut(s) 405
PaeR7I CTCGAG 1 cut(s) 606
PciI ACATGT 1 cut(s) 376
PcsI WCGNNNNNNNCGW 2 cut(s) 251, 453
PfeI GAWTC 2 cut(s) 92, 458
PkrI GCNGC 1 cut(s) 623
PscI ACATGT 1 cut(s) 376
PspN4I GGNNCC 1 cut(s) 281
PstI CTGCAG 1 cut(s) 535
PsuI RGATCY 1 cut(s) 450
RsaI GTAC 3 cut(s) 281, 296, 351
RsaNI GTAC 3 cut(s) 280, 295, 350
RseI CAYNNNNRTG 5 cut(s) 150, 405, 545, 653, 680
SaqAI TTAA 2 cut(s) 314, 444
SatI GCNGC 1 cut(s) 622
Sau3AI GATC 2 cut(s) 397, 450
ScaI AGTACT 1 cut(s) 296
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 2 cut(s) 334, 531
Sfr274I CTCGAG 1 cut(s) 606
SlaI CTCGAG 1 cut(s) 606
SmiMI CAYNNNNRTG 5 cut(s) 150, 405, 545, 653, 680
SmlI CTYRAG 1 cut(s) 606
SmoI CTYRAG 1 cut(s) 606
Sse9I AATT 4 cut(s) 184, 223, 670, 686
SsiI CCGC 1 cut(s) 621
SspI AATATT 1 cut(s) 484
SspMI CTAG 3 cut(s) 276, 602, 638
StyI CCWWGG 2 cut(s) 275, 340
TaaI ACNGT 1 cut(s) 354
TaiI ACGT 1 cut(s) 333
TaqI TCGA 4 cut(s) 254, 456, 461, 607
TasI AATT 4 cut(s) 184, 223, 670, 686
TatI WGTACW 2 cut(s) 294, 349
TauI GCSGC 1 cut(s) 624
TfiI GAWTC 2 cut(s) 92, 458
Tru1I TTAA 2 cut(s) 314, 444
Tru9I TTAA 2 cut(s) 314, 444
TscAI CASTG 1 cut(s) 412
TspDTI ATGAA 4 cut(s) 195, 412, 642, 683
TspRI CASTG 1 cut(s) 412
XapI RAATTY 3 cut(s) 184, 223, 670
XceI RCATGY 2 cut(s) 380, 525
XhoI CTCGAG 1 cut(s) 606
XmaJI CCTAGG 1 cut(s) 275
XmiI GTMKAC 2 cut(s) 73, 333
XspI CTAG 3 cut(s) 276, 602, 638
ZraI GACGTC 1 cut(s) 331
ZrmI AGTACT 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.