Rmu_sc0006318.1_g000004

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006318.1
Physical Location & Seq
Forward (+)
10439 .. 12335
1897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006318.1_g000004.1.cds

Sequence Viewer

Length: 627 bp
atgatgtggcggagattcaagcaattcttcctctttgcattgcttggttgttttgctcttaatcatgaccaagttcatgctcaagatgatcaatcaggtatgatatcagcgataaaatttaatggtgaaatatctctatttaggtatccaagtgatcttcatgatcgtcgatggtatccctttgaccgcgatgattggacgcaattaaatacctcattaagcagcactaccgaggacaatagttaccaagttccatctattgtcatgtgtactgctgccacacccaaaaatgcagaggattccttgaatattttctggctaccttctgatagcaatgcacagtatcatatttacatgcactttgcagaagtagaaaagctccaagcgaacgagtctagacaattcaatattacttttaatagagagcccttttatgggccctcttctcctggatacatgtccgccactactatttatagccgagaggcttggggtccaacaggacaatatataaatttttccatcttcaaggatgagaactataccctaccacctatcctcaatgcttatgaaatatatatggtcaagccagcgccccaatcagcgacaaaccatgacgacagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

208

Amino Acids

24.15

Weight (kDa)

5.01

Isoelectric Point (pI)

65.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 189
AciI CCGC 3 cut(s) 10, 187, 462
AcsI RAATTY 2 cut(s) 116, 514
AfaI GTAC 1 cut(s) 271
AfiI CCNNNNNNNGG 2 cut(s) 434, 435
AflIII ACRYGT 1 cut(s) 456
AgsI TTSAA 4 cut(s) 19, 307, 406, 529
AjnI CCWGG 1 cut(s) 448
AluBI AGCT 1 cut(s) 379
AluI AGCT 1 cut(s) 379
AoxI GGCC 1 cut(s) 437
ApaI GGGCCC 1 cut(s) 441
ApeKI GCWGC 2 cut(s) 222, 275
ApoI RAATTY 2 cut(s) 116, 514
Asp700I GAANNNNTTC 1 cut(s) 311
AspLEI GCGC 1 cut(s) 595
AspS9I GGNCC 3 cut(s) 437, 438, 494
AsuHPI GGTGA 1 cut(s) 137
AvaII GGWCC 1 cut(s) 494
BaeGI GKGCMC 1 cut(s) 441
BanII GRGCYC 2 cut(s) 429, 441
BbvI GCAGC 2 cut(s) 234, 262
BccI CCATC 3 cut(s) 165, 262, 530
BciT130I CCWGG 1 cut(s) 450
BciVI GTATCC 3 cut(s) 156, 186, 446
BclI TGATCA 1 cut(s) 88
BfaI CTAG 1 cut(s) 396
BfoI RGCGCY 1 cut(s) 596
BfuI GTATCC 3 cut(s) 156, 186, 446
BisI GCNGC 2 cut(s) 223, 276
BlsI GCNGC 2 cut(s) 224, 277
Bme1390I CCNGG 1 cut(s) 450
Bme18I GGWCC 1 cut(s) 494
BmgT120I GGNCC 3 cut(s) 437, 438, 494
BmiI GGNNCC 2 cut(s) 439, 495
BmrFI CCNGG 1 cut(s) 450
BpuEI CTTGAG 1 cut(s) 66
BsaJI CCNNGG 1 cut(s) 231
Bsc4I CCNNNNNNNGG 2 cut(s) 434, 435
Bse3DI GCAATG 2 cut(s) 38, 340
BseBI CCWGG 1 cut(s) 450
BseDI CCNNGG 1 cut(s) 231
BseGI GGATG 1 cut(s) 538
BseLI CCNNNNNNNGG 2 cut(s) 434, 435
BseMI GCAATG 2 cut(s) 38, 340
BseSI GKGCMC 1 cut(s) 441
BseXI GCAGC 2 cut(s) 234, 262
Bsh1236I CGCG 1 cut(s) 189
BshFI GGCC 1 cut(s) 439
BslI CCNNNNNNNGG 2 cut(s) 434, 435
BsnI GGCC 1 cut(s) 439
Bsp120I GGGCCC 1 cut(s) 437
Bsp1286I GDGCHC 2 cut(s) 429, 441
Bsp143I GATC 3 cut(s) 88, 154, 163
BspACI CCGC 3 cut(s) 10, 187, 462
BspANI GGCC 1 cut(s) 439
BspFNI CGCG 1 cut(s) 189
BspHI TCATGA 2 cut(s) 64, 160
BspLI GGNNCC 2 cut(s) 439, 495
BsrDI GCAATG 2 cut(s) 38, 340
BssECI CCNNGG 1 cut(s) 231
BssMI GATC 3 cut(s) 88, 154, 163
Bst2UI CCWGG 1 cut(s) 450
Bst4CI ACNGT 2 cut(s) 342, 623
Bst6I CTCTTC 1 cut(s) 448
BstC8I GCNNGC 1 cut(s) 591
BstF5I GGATG 1 cut(s) 538
BstFNI CGCG 1 cut(s) 189
BstH2I RGCGCY 1 cut(s) 596
BstHHI GCGC 1 cut(s) 595
BstKTI GATC 3 cut(s) 91, 157, 166
BstMBI GATC 3 cut(s) 88, 154, 163
BstNI CCWGG 1 cut(s) 450
BstNSI RCATGY 2 cut(s) 358, 460
BstSCI CCNGG 1 cut(s) 448
BstSLI GKGCMC 1 cut(s) 441
BstUI CGCG 1 cut(s) 189
BstV1I GCAGC 2 cut(s) 234, 262
BsuI GTATCC 3 cut(s) 156, 186, 446
BsuRI GGCC 1 cut(s) 439
BtgZI GCGATG 1 cut(s) 204
BtsCI GGATG 1 cut(s) 538
Cac8I GCNNGC 1 cut(s) 591
CciI TCATGA 2 cut(s) 64, 160
CfoI GCGC 1 cut(s) 595
Cfr13I GGNCC 3 cut(s) 437, 438, 494
CseI GACGC 1 cut(s) 208
Csp6I GTAC 1 cut(s) 270
CviAII CATG 7 cut(s) 65, 77, 161, 265, 355, 457, 614
CviJI RGCY 7 cut(s) 319, 379, 427, 439, 480, 488, 589
CviKI_1 RGCY 7 cut(s) 319, 379, 427, 439, 480, 488, 589
CviQI GTAC 1 cut(s) 270
DpnI GATC 3 cut(s) 90, 156, 165
DpnII GATC 3 cut(s) 88, 154, 163
Eam1104I CTCTTC 1 cut(s) 448
EarI CTCTTC 1 cut(s) 448
EciI GGCGGA 2 cut(s) 25, 451
Eco24I GRGCYC 2 cut(s) 429, 441
Eco32I GATATC 1 cut(s) 105
Eco47I GGWCC 1 cut(s) 494
EcoO109I RGGNCCY 1 cut(s) 438
EcoRII CCWGG 1 cut(s) 448
EcoRV GATATC 1 cut(s) 105
EcoT38I GRGCYC 2 cut(s) 429, 441
FaeI CATG 7 cut(s) 68, 80, 164, 268, 358, 460, 617
FalI AAGNNNNNCTT 2 cut(s) 11, 43
FatI CATG 7 cut(s) 64, 76, 160, 264, 354, 456, 613
FbaI TGATCA 1 cut(s) 88
Fnu4HI GCNGC 2 cut(s) 223, 276
FokI GGATG 1 cut(s) 545
FriOI GRGCYC 2 cut(s) 429, 441
Fsp4HI GCNGC 2 cut(s) 223, 276
FspBI CTAG 1 cut(s) 396
GlaI GCGC 1 cut(s) 594
GluI GCNGC 2 cut(s) 223, 276
HaeII RGCGCY 1 cut(s) 596
HaeIII GGCC 1 cut(s) 439
HgaI GACGC 1 cut(s) 208
HhaI GCGC 1 cut(s) 595
Hin1II CATG 7 cut(s) 68, 80, 164, 268, 358, 460, 617
Hin6I GCGC 1 cut(s) 593
HinP1I GCGC 1 cut(s) 593
HinfI GANTC 3 cut(s) 15, 299, 392
HphI GGTGA 1 cut(s) 137
Hpy166II GTNNAC 1 cut(s) 270
Hpy188I TCNGA 1 cut(s) 328
Hpy188III TCNNGA 4 cut(s) 65, 83, 161, 396
Hpy8I GTNNAC 1 cut(s) 270
Hpy99I CGWCG 1 cut(s) 171
HpyAV CCTTC 1 cut(s) 333
HpyCH4III ACNGT 2 cut(s) 342, 623
HpyCH4V TGCA 5 cut(s) 38, 293, 338, 358, 365
Hsp92II CATG 7 cut(s) 68, 80, 164, 268, 358, 460, 617
HspAI GCGC 1 cut(s) 593
Ksp22I TGATCA 1 cut(s) 88
Kzo9I GATC 3 cut(s) 88, 154, 163
LmnI GCTCC 1 cut(s) 384
LpnPI CCDG 6 cut(s) 81, 301, 435, 462, 486, 603
Lsp1109I GCAGC 2 cut(s) 234, 262
MaeI CTAG 1 cut(s) 396
MaeIII GTNAC 1 cut(s) 242
MalI GATC 3 cut(s) 90, 156, 165
MboI GATC 3 cut(s) 88, 154, 163
MboII GAAGA 4 cut(s) 19, 149, 435, 517
MhlI GDGCHC 2 cut(s) 429, 441
MluCI AATT 5 cut(s) 23, 116, 203, 401, 514
MlyI GAGTC 1 cut(s) 401
MmeI TCCRAC 1 cut(s) 521
MnlI CCTC 7 cut(s) 41, 223, 226, 289, 451, 478, 569
MroXI GAANNNNTTC 1 cut(s) 311
MseI TTAA 5 cut(s) 60, 120, 206, 218, 417
MspR9I CCNGG 1 cut(s) 450
MvaI CCWGG 1 cut(s) 450
MvnI CGCG 1 cut(s) 189
NdeII GATC 3 cut(s) 88, 154, 163
NlaIII CATG 7 cut(s) 68, 80, 164, 268, 358, 460, 617
NlaIV GGNNCC 2 cut(s) 439, 495
NmeAIII GCCGAG 1 cut(s) 506
NspI RCATGY 2 cut(s) 358, 460
PagI TCATGA 2 cut(s) 64, 160
PciI ACATGT 1 cut(s) 456
PdmI GAANNNNTTC 1 cut(s) 311
PfeI GAWTC 2 cut(s) 15, 299
PfoI TCCNGGA 1 cut(s) 448
PkrI GCNGC 2 cut(s) 224, 277
PleI GAGTC 1 cut(s) 400
PpsI GAGTC 1 cut(s) 400
PscI ACATGT 1 cut(s) 456
Psp6I CCWGG 1 cut(s) 448
PspGI CCWGG 1 cut(s) 448
PspN4I GGNNCC 2 cut(s) 439, 495
PspOMI GGGCCC 1 cut(s) 437
PspPI GGNCC 3 cut(s) 437, 438, 494
RsaI GTAC 1 cut(s) 271
RsaNI GTAC 1 cut(s) 270
SaqAI TTAA 5 cut(s) 60, 120, 206, 218, 417
SatI GCNGC 2 cut(s) 223, 276
Sau3AI GATC 3 cut(s) 88, 154, 163
Sau96I GGNCC 3 cut(s) 437, 438, 494
SchI GAGTC 1 cut(s) 401
ScrFI CCNGG 1 cut(s) 450
SduI GDGCHC 2 cut(s) 429, 441
SetI ASST 6 cut(s) 100, 146, 215, 325, 381, 556
SinI GGWCC 1 cut(s) 494
SmlI CTYRAG 1 cut(s) 81
SmoI CTYRAG 1 cut(s) 81
Sse9I AATT 5 cut(s) 23, 116, 203, 401, 514
SsiI CCGC 3 cut(s) 10, 187, 462
SspI AATATT 2 cut(s) 310, 409
SspMI CTAG 1 cut(s) 396
StyD4I CCNGG 1 cut(s) 448
TaaI ACNGT 2 cut(s) 342, 623
TaqI TCGA 1 cut(s) 169
TasI AATT 5 cut(s) 23, 116, 203, 401, 514
TatI WGTACW 1 cut(s) 269
TfiI GAWTC 2 cut(s) 15, 299
Tru1I TTAA 5 cut(s) 60, 120, 206, 218, 417
Tru9I TTAA 5 cut(s) 60, 120, 206, 218, 417
TseI GCWGC 2 cut(s) 222, 275
TspDTI ATGAA 3 cut(s) 65, 149, 585
VpaK11BI GGWCC 1 cut(s) 494
XapI RAATTY 2 cut(s) 116, 514
XbaI TCTAGA 1 cut(s) 395
XceI RCATGY 2 cut(s) 358, 460
XmnI GAANNNNTTC 1 cut(s) 311
XspI CTAG 1 cut(s) 396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.