pycom09g11640

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0000083
Physical Location & Seq
Forward (+)
9845764 .. 9853016
7253 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g11640.7

Sequence Viewer

Length: 1839 bp
ATGGGCACAGCTGCAACGCCCAATAGTTCAAATGATGCGTTTAATTTTTTCGAGGAGTCTTCGGATGACACTGAAGTATATCATGTTTACTTGCACTTTGCAGAAGTTGAAAAGCTCCAACCCAACCAGTCTAGACAGTTCAACATTACTACAAACGGAAAGCTGTGTCATGGGACACTTGCTCCTGATTATTTGTCCACAACGACAATATTATGTACCGTTGAATCCTTGGGTGGATCAGGAGTACAAAATAACGTCTCAATTATTAAGACTGGAAACTCTACCCTTCCACCCATCCTCAATGCCTTCGAGATTTATAAAGTGAAAGAATTCTTAATATCAGATACCAACCAAGAAGATGTTGAGGCTATCACAAACATCAAGTCAACCTATAATATTGAAAAGAACTGGCAAGGAGATCCTTGTAACCCTCAAAATTACTCATGGGATGGTCTACACTGTAGCTATCATGCAAATGATCCCCCAAGAATTATATCCTTGAACTTGTCTTCCAGTGGATTAGAAGGGGAGATTTCTCCTTCTCTGTCAAATCTAACAATGATAAAGACATTGGATTTATCAAACAACAACTTAAGAGGATCAATTCCAGAATTTTTGTCACAAATGCCGACATTAAATGTCTTAAATTTGGAGAATAACAACCTCAAAGGCTCAATTCCGGCGGGACTCATTGACAGATGGAAGGATGGTTTCATATCAATAAGTTTGTGCGAAAAACCAAACCTATCCGGAAATGTTTCTTGCGACAAGAAGAAGAACAGGAAGTACAATTTTTTTGTTCCGATGATGATTGTTTCGGTTGTTGCACTGCCAGTCCTCTTACTAAGTGCAGCAGCTATCTGCTGTCGGGCTGCTTCTAAAAGGAAAAGGCGACTTGGAAATAGCACAGATGCAAATGTAGCCATTCAGCATGGGTCATTTGAGCGAAAAGGGAGACGGTTTACGTACTCTGAGATAGTACAGATTACAGAGGAATTCAAGAGGGTTCTTGGAAAAGGCGGCTTTGGAACAGTTTATCACGGCCATATAGACGACACTCAGGTAGCTGTCAAGATGCTTTCACCGTCATCAGTGCAAGGGTTTCAGCAATTTCTCACAGAGGTTGATCTTCTTATGAGAGTTCATCATAGAAATTTGACAAGTCTTGTTGGATATTGCAATGATGAAACCAACATAGGCCTGATCTACGAGTACATGGCCAATGGAAACCTGCGAGAACATCTTTCAGGTAGCAGATCAAATATCTTGAGTTGGGGAGATAGAGTTCAAATAGCAATAGAAGCTGCACAAGGACTGGAGTATCTGCACTATGGCTGCAGTCCGCCTATAATCCACAGGGATGTGAAATCAACAAACATCTTGCTCAATGAAAAATTCGAAGCCAAACTCTCTGATTTTGGCATATCCAGAAGTTTCCCTACAGAGGATGGAACGCATATAACAACTGATGTCGTTGGCACTCCCGGGTACCTTGACCCTGAGTATTACGCATCAAACAGGTTGAATAAAGAAAGTGATGTTTATAGCTTTGGGATTGTACTGTTGGAGATTATCACAAGTCGACCTGTTTTTTCTAGAACGCATGAGCGGAGTTACATCAGTGAATGGTTCAGTTTCATGCTTCAGAAAGGAGACATTTACAGTCTTGTTGATCCGAGGTTAGAAGGAAAATTCAATATTAACTCAGTCTGGAAAGCTGTGGAAATAGCAAATGCATGCGTATCTCCAACTGCCATCGAAAGGCTAAGCATGAGTCAGGTAGTGGCCGATCTAAAGGAGTGCTTGGCAACAGAACTCGCTCGAGCACCCGAGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

613

Amino Acids

68.08

Weight (kDa)

5.74

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 318
Acc36I ACCTGC 1 cut(s) 1239
Acc65I GGTACC 1 cut(s) 1488
AccB1I GGYRCC 1 cut(s) 1488
AccBSI CCGCTC 1 cut(s) 1609
AccI GTMKAC 2 cut(s) 454, 1582
AccIII TCCGGA 1 cut(s) 749
AciI CCGC 4 cut(s) 683, 1020, 1343, 1609
AclWI GGATC 5 cut(s) 244, 413, 473, 607, 1667
AcoI YGGCCR 3 cut(s) 1042, 1218, 1785
AcsI RAATTY 7 cut(s) 329, 611, 646, 995, 1153, 1394, 1691
AcuI CTGAAG 2 cut(s) 93, 1628
AfaI GTAC 8 cut(s) 217, 246, 788, 968, 981, 1214, 1490, 1560
AfiI CCNNNNNNNGG 2 cut(s) 1444, 1761
AflII CTTAAG 1 cut(s) 592
AloI GAACNNNNNNTCC 4 cut(s) 494, 526, 1269, 1301
AluBI AGCT 9 cut(s) 11, 115, 163, 465, 857, 1067, 1304, 1548, 1718
AluI AGCT 9 cut(s) 11, 115, 163, 465, 857, 1067, 1304, 1548, 1718
Alw21I GWGCWC 1 cut(s) 1828
Alw26I GTCTC 3 cut(s) 262, 949, 1647
AlwI GGATC 5 cut(s) 244, 413, 473, 607, 1667
Ama87I CYCGRG 3 cut(s) 1484, 1821, 1829
Aor13HI TCCGGA 1 cut(s) 749
AoxI GGCC 4 cut(s) 1042, 1198, 1218, 1785
ApeKI GCWGC 6 cut(s) 11, 851, 854, 872, 1304, 1335
ApoI RAATTY 7 cut(s) 329, 611, 646, 995, 1153, 1394, 1691
ArsI GACNNNNNNTTYG 2 cut(s) 368, 400
Asp700I GAANNNNTTC 2 cut(s) 329, 757
Asp718I GGTACC 1 cut(s) 1488
AsuC2I CCSGG 2 cut(s) 1485, 1486
AsuHPI GGTGA 1 cut(s) 1074
AsuII TTCGAA 1 cut(s) 1398
AvaI CYCGRG 3 cut(s) 1484, 1821, 1829
BaeGI GKGCMC 1 cut(s) 8
BaeI ACNNNNGTAYC 2 cut(s) 1304, 1337
BalI TGGCCA 1 cut(s) 1220
BanI GGYRCC 1 cut(s) 1488
BarI GAAGNNNNNNTAC 2 cut(s) 1423, 1455
BbsI GAAGAC 2 cut(s) 51, 501
Bbv12I GWGCWC 1 cut(s) 1828
BbvI GCAGC 5 cut(s) 859, 863, 866, 1291, 1322
BccI CCATC 6 cut(s) 302, 443, 693, 701, 1442, 1763
BceAI ACGGC 1 cut(s) 1057
BcnI CCSGG 2 cut(s) 1485, 1486
BcoDI GTCTC 3 cut(s) 262, 949, 1647
BfaI CTAG 2 cut(s) 132, 1596
BfmI CTRYAG 3 cut(s) 460, 1336, 1440
BfrI CTTAAG 1 cut(s) 592
BfuAI ACCTGC 1 cut(s) 1239
BisI GCNGC 7 cut(s) 12, 852, 855, 873, 1021, 1305, 1336
BlpI GCTNAGC 1 cut(s) 1766
BlsI GCNGC 7 cut(s) 13, 853, 856, 874, 1022, 1306, 1337
Bme1390I CCNGG 2 cut(s) 1485, 1486
BmeT110I CYCGRG 3 cut(s) 1484, 1821, 1829
BmiI GGNNCC 1 cut(s) 1490
BmrFI CCNGG 2 cut(s) 1485, 1486
BmsI GCATC 4 cut(s) 25, 901, 1065, 1520
BpiI GAAGAC 2 cut(s) 51, 501
BpmI CTGGAG 1 cut(s) 1337
Bpu1102I GCTNAGC 1 cut(s) 1766
Bpu14I TTCGAA 1 cut(s) 1398
BpuEI CTTGAG 1 cut(s) 1288
BpuMI CCSGG 2 cut(s) 1485, 1486
BsaAI YACGTR 1 cut(s) 966
BsaJI CCNNGG 4 cut(s) 228, 1484, 1676, 1830
BsaWI WCCGGW 1 cut(s) 749
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 1269, 1299
Bsc4I CCNNNNNNNGG 2 cut(s) 1444, 1761
Bse1I ACTGG 6 cut(s) 127, 277, 413, 513, 833, 1320
Bse3DI GCAATG 1 cut(s) 1186
BseAI TCCGGA 1 cut(s) 749
BseDI CCNNGG 4 cut(s) 228, 1484, 1676, 1830
BseGI GGATG 6 cut(s) 70, 294, 454, 712, 1366, 1453
BseLI CCNNNNNNNGG 2 cut(s) 1444, 1761
BseMI GCAATG 1 cut(s) 1186
BseMII CTCAG 4 cut(s) 963, 1073, 1491, 1719
BseNI ACTGG 6 cut(s) 127, 277, 413, 513, 833, 1320
BseRI GAGGAG 1 cut(s) 68
BseSI GKGCMC 1 cut(s) 8
BseXI GCAGC 5 cut(s) 859, 863, 866, 1291, 1322
BsgI GTGCAG 3 cut(s) 870, 1290, 1310
BshFI GGCC 4 cut(s) 1044, 1200, 1220, 1787
BshNI GGYRCC 1 cut(s) 1488
BsiHKAI GWGCWC 1 cut(s) 1828
BsiHKCI CYCGRG 3 cut(s) 1484, 1821, 1829
BsiSI CCGG 3 cut(s) 680, 750, 1485
BslFI GGGAC 2 cut(s) 187, 699
BslI CCNNNNNNNGG 2 cut(s) 1444, 1761
BsmAI GTCTC 3 cut(s) 262, 949, 1647
BsmBI CGTCTC 2 cut(s) 262, 949
BsmFI GGGAC 2 cut(s) 187, 699
BsnI GGCC 4 cut(s) 1044, 1200, 1220, 1787
BsoBI CYCGRG 3 cut(s) 1484, 1821, 1829
Bsp119I TTCGAA 1 cut(s) 1398
Bsp1286I GDGCHC 2 cut(s) 8, 1828
Bsp13I TCCGGA 1 cut(s) 749
Bsp143I GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
Bsp1720I GCTNAGC 1 cut(s) 1766
BspACI CCGC 4 cut(s) 683, 1020, 1343, 1609
BspANI GGCC 4 cut(s) 1044, 1200, 1220, 1787
BspCNI CTCAG 4 cut(s) 964, 1072, 1492, 1718
BspEI TCCGGA 1 cut(s) 749
BspLI GGNNCC 1 cut(s) 1490
BspMAI CTGCAG 1 cut(s) 1340
BspMI ACCTGC 1 cut(s) 1239
BspPI GGATC 5 cut(s) 244, 413, 473, 607, 1667
BspT104I TTCGAA 1 cut(s) 1398
BspT107I GGYRCC 1 cut(s) 1488
BspTI CTTAAG 1 cut(s) 592
BsrBI CCGCTC 1 cut(s) 1609
BsrDI GCAATG 1 cut(s) 1186
BsrI ACTGG 6 cut(s) 127, 277, 413, 513, 833, 1320
BssECI CCNNGG 4 cut(s) 228, 1484, 1676, 1830
BssMI GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
BssT1I CCWWGG 1 cut(s) 228
Bst4CI ACNGT 8 cut(s) 138, 220, 461, 960, 1033, 1086, 1563, 1664
BstAFI CTTAAG 1 cut(s) 592
BstBAI YACGTR 1 cut(s) 966
BstBI TTCGAA 1 cut(s) 1398
BstC8I GCNNGC 1 cut(s) 1738
BstDEI CTNAG 6 cut(s) 845, 972, 1059, 1500, 1705, 1766
BstF5I GGATG 6 cut(s) 70, 294, 454, 712, 1366, 1453
BstKTI GATC 9 cut(s) 239, 421, 481, 602, 1129, 1206, 1259, 1675, 1792
BstMAI GTCTC 3 cut(s) 262, 949, 1647
BstMBI GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
BstMWI GCNNNNNNNGC 3 cut(s) 920, 1301, 1832
BstNSI RCATGY 1 cut(s) 1740
BstSCI CCNGG 2 cut(s) 1483, 1484
BstSFI CTRYAG 3 cut(s) 460, 1336, 1440
BstSLI GKGCMC 1 cut(s) 8
BstSNI TACGTA 1 cut(s) 966
BstV1I GCAGC 5 cut(s) 859, 863, 866, 1291, 1322
BstV2I GAAGAC 2 cut(s) 51, 501
BstX2I RGATCY 1 cut(s) 418
BstYI RGATCY 1 cut(s) 418
BsuRI GGCC 4 cut(s) 1044, 1200, 1220, 1787
BtsCI GGATG 6 cut(s) 70, 294, 454, 712, 1366, 1453
BtsI GCAGTG 1 cut(s) 827
BtsIMutI CAGTG 6 cut(s) 69, 457, 520, 827, 1098, 1627
BveI ACCTGC 1 cut(s) 1239
Cac8I GCNNGC 1 cut(s) 1738
Cfr9I CCCGGG 1 cut(s) 1484
Csp6I GTAC 8 cut(s) 216, 245, 787, 967, 980, 1213, 1489, 1559
CviQI GTAC 8 cut(s) 216, 245, 787, 967, 980, 1213, 1489, 1559
DdeI CTNAG 6 cut(s) 845, 972, 1059, 1500, 1705, 1766
DpnI GATC 9 cut(s) 238, 420, 480, 601, 1128, 1205, 1258, 1674, 1791
DpnII GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
EaeI YGGCCR 3 cut(s) 1042, 1218, 1785
EciI GGCGGA 1 cut(s) 1332
Eco105I TACGTA 1 cut(s) 966
Eco130I CCWWGG 1 cut(s) 228
Eco147I AGGCCT 1 cut(s) 1200
Eco57I CTGAAG 2 cut(s) 93, 1628
Eco88I CYCGRG 3 cut(s) 1484, 1821, 1829
EcoRI GAATTC 2 cut(s) 329, 995
EcoT14I CCWWGG 1 cut(s) 228
EcoT22I ATGCAT 1 cut(s) 1738
ErhI CCWWGG 1 cut(s) 228
Esp3I CGTCTC 2 cut(s) 262, 949
FalI AAGNNNNNCTT 2 cut(s) 1787, 1819
FaqI GGGAC 2 cut(s) 187, 699
FauI CCCGC 1 cut(s) 676
FblI GTMKAC 2 cut(s) 454, 1582
Fnu4HI GCNGC 7 cut(s) 12, 852, 855, 873, 1021, 1305, 1336
FokI GGATG 6 cut(s) 77, 281, 461, 719, 1373, 1460
Fsp4HI GCNGC 7 cut(s) 12, 852, 855, 873, 1021, 1305, 1336
FspBI CTAG 2 cut(s) 132, 1596
GluI GCNGC 7 cut(s) 12, 852, 855, 873, 1021, 1305, 1336
GsuI CTGGAG 1 cut(s) 1337
HaeIII GGCC 4 cut(s) 1044, 1200, 1220, 1787
HapII CCGG 3 cut(s) 680, 750, 1485
HincII GTYRAC 2 cut(s) 387, 1583
HindII GTYRAC 2 cut(s) 387, 1583
HinfI GANTC 4 cut(s) 56, 224, 687, 1774
HpaII CCGG 3 cut(s) 680, 750, 1485
HphI GGTGA 1 cut(s) 1074
Hpy166II GTNNAC 6 cut(s) 88, 198, 387, 455, 963, 1583
Hpy188I TCNGA 7 cut(s) 64, 343, 804, 973, 1414, 1647, 1677
Hpy8I GTNNAC 6 cut(s) 88, 198, 387, 455, 963, 1583
HpyAV CCTTC 6 cut(s) 296, 316, 518, 549, 697, 1679
HpyCH4III ACNGT 8 cut(s) 138, 220, 461, 960, 1033, 1086, 1563, 1664
HpyCH4IV ACGT 2 cut(s) 255, 965
HpyF10VI GCNNNNNNNGC 3 cut(s) 920, 1301, 1832
HpyF3I CTNAG 6 cut(s) 845, 972, 1059, 1500, 1705, 1766
HpySE526I ACGT 2 cut(s) 255, 965
Kpn2I TCCGGA 1 cut(s) 749
KpnI GGTACC 1 cut(s) 1492
Kzo9I GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
LmnI GCTCC 2 cut(s) 120, 187
Lsp1109I GCAGC 5 cut(s) 859, 863, 866, 1291, 1322
LweI GCATC 4 cut(s) 25, 901, 1065, 1520
MaeI CTAG 2 cut(s) 132, 1596
MaeII ACGT 2 cut(s) 255, 965
MaeIII GTNAC 3 cut(s) 425, 618, 1613
MalI GATC 9 cut(s) 238, 420, 480, 601, 1128, 1205, 1258, 1674, 1791
MbiI CCGCTC 1 cut(s) 1609
MboI GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
MboII GAAGA 6 cut(s) 51, 368, 501, 784, 787, 1121
MflI RGATCY 1 cut(s) 418
MhlI GDGCHC 2 cut(s) 8, 1828
MlsI TGGCCA 1 cut(s) 1220
MluNI TGGCCA 1 cut(s) 1220
MlyI GAGTC 3 cut(s) 65, 681, 1783
MmeI TCCRAC 4 cut(s) 142, 1150, 1545, 1772
Mox20I TGGCCA 1 cut(s) 1220
Mph1103I ATGCAT 1 cut(s) 1738
MroI TCCGGA 1 cut(s) 749
MroXI GAANNNNTTC 2 cut(s) 329, 757
MscI TGGCCA 1 cut(s) 1220
MseI TTAA 7 cut(s) 42, 267, 335, 593, 635, 644, 1701
MslI CAYNNNNRTG 2 cut(s) 474, 1359
Msp20I TGGCCA 1 cut(s) 1220
MspA1I CMGCKG 1 cut(s) 11
MspCI CTTAAG 1 cut(s) 592
MspI CCGG 3 cut(s) 680, 750, 1485
MspR9I CCNGG 2 cut(s) 1485, 1486
MwoI GCNNNNNNNGC 3 cut(s) 920, 1301, 1832
NciI CCSGG 2 cut(s) 1485, 1486
NdeII GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
NlaIV GGNNCC 1 cut(s) 1490
NmuCI GTSAC 1 cut(s) 618
NsiI ATGCAT 1 cut(s) 1738
NspI RCATGY 1 cut(s) 1740
NspV TTCGAA 1 cut(s) 1398
PaeI GCATGC 1 cut(s) 1740
PaeR7I CTCGAG 1 cut(s) 1821
PceI AGGCCT 1 cut(s) 1200
PdmI GAANNNNTTC 2 cut(s) 329, 757
PfeI GAWTC 1 cut(s) 224
PkrI GCNGC 7 cut(s) 13, 853, 856, 874, 1022, 1306, 1337
PleI GAGTC 3 cut(s) 64, 681, 1782
PpsI GAGTC 3 cut(s) 64, 681, 1782
Ppu21I YACGTR 1 cut(s) 966
PsiI TTATAA 1 cut(s) 318
PspN4I GGNNCC 1 cut(s) 1490
PspXI VCTCGAGB 1 cut(s) 1821
PsrI GAACNNNNNNTAC 2 cut(s) 770, 802
PstI CTGCAG 1 cut(s) 1340
PsuI RGATCY 1 cut(s) 418
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 8 cut(s) 217, 246, 788, 968, 981, 1214, 1490, 1560
RsaNI GTAC 8 cut(s) 216, 245, 787, 967, 980, 1213, 1489, 1559
RseI CAYNNNNRTG 2 cut(s) 474, 1359
SalI GTCGAC 1 cut(s) 1581
SaqAI TTAA 7 cut(s) 42, 267, 335, 593, 635, 644, 1701
SatI GCNGC 7 cut(s) 12, 852, 855, 873, 1021, 1305, 1336
Sau3AI GATC 9 cut(s) 236, 418, 478, 599, 1126, 1203, 1256, 1672, 1789
SchI GAGTC 3 cut(s) 65, 681, 1783
ScrFI CCNGG 2 cut(s) 1485, 1486
SduI GDGCHC 2 cut(s) 8, 1828
SfaNI GCATC 4 cut(s) 25, 901, 1065, 1520
SfcI CTRYAG 3 cut(s) 460, 1336, 1440
Sfr274I CTCGAG 1 cut(s) 1821
SfuI TTCGAA 1 cut(s) 1398
SlaI CTCGAG 1 cut(s) 1821
SmaI CCCGGG 1 cut(s) 1486
SmiMI CAYNNNNRTG 2 cut(s) 474, 1359
SmlI CTYRAG 3 cut(s) 592, 1267, 1821
SmoI CTYRAG 3 cut(s) 592, 1267, 1821
SnaBI TACGTA 1 cut(s) 966
SphI GCATGC 1 cut(s) 1740
SseBI AGGCCT 1 cut(s) 1200
SsiI CCGC 4 cut(s) 683, 1020, 1343, 1609
SspI AATATT 3 cut(s) 210, 397, 1699
SspMI CTAG 2 cut(s) 132, 1596
StuI AGGCCT 1 cut(s) 1200
StyD4I CCNGG 2 cut(s) 1483, 1484
StyI CCWWGG 1 cut(s) 228
TaaI ACNGT 8 cut(s) 138, 220, 461, 960, 1033, 1086, 1563, 1664
TaiI ACGT 2 cut(s) 258, 968
TaqI TCGA 6 cut(s) 51, 309, 1398, 1582, 1758, 1822
TatI WGTACW 5 cut(s) 244, 786, 979, 1212, 1558
TauI GCSGC 1 cut(s) 1023
TfiI GAWTC 1 cut(s) 224
Tru1I TTAA 7 cut(s) 42, 267, 335, 593, 635, 644, 1701
Tru9I TTAA 7 cut(s) 42, 267, 335, 593, 635, 644, 1701
TscAI CASTG 6 cut(s) 76, 464, 520, 834, 1098, 1627
TseFI GTSAC 1 cut(s) 618
TseI GCWGC 6 cut(s) 11, 851, 854, 872, 1304, 1335
Tsp45I GTSAC 1 cut(s) 618
TspDTI ATGAA 5 cut(s) 703, 1133, 1200, 1404, 1627
TspGWI ACGGA 1 cut(s) 171
TspMI CCCGGG 1 cut(s) 1484
TspRI CASTG 6 cut(s) 76, 464, 520, 834, 1098, 1627
Vha464I CTTAAG 1 cut(s) 592
XapI RAATTY 7 cut(s) 329, 611, 646, 995, 1153, 1394, 1691
XbaI TCTAGA 2 cut(s) 131, 1595
XceI RCATGY 1 cut(s) 1740
XhoI CTCGAG 1 cut(s) 1821
XmaI CCCGGG 1 cut(s) 1484
XmiI GTMKAC 2 cut(s) 454, 1582
XmnI GAANNNNTTC 2 cut(s) 329, 757
XspI CTAG 2 cut(s) 132, 1596
Zsp2I ATGCAT 1 cut(s) 1738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.