FvH4_6g32740

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000083
Physical Location & Seq
Forward (+)
25819338 .. 25823966
4629 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g32740.t1

Sequence Viewer

Length: 2628 bp
ATGATAATCAAGCATTTCCCATTTGCATTGCTTTCCGGGTTTGCTCTTATACTTTCAGTTCTTGCGGCTGATGATCAAACAGGCTTCATTAGCTTGGACTGTGGGCTACCAGCAAGTTTAACCTACTCTGAGCCAGATTTAGGCATTCAGTACATTTCAGATGAACCCTTTATTGACACCGGAGTAAGTAAAAGCATTGCGCCGGAATATATAGCTACACATCAGCAGCAAGCAGCTCATGTTCGAAGCTTTCCTCAATGGACCAGAAACTGTTACAGAGTGAACATTACAAGTGGCACTAAATATTTAATCAGAGCAAGTTTTGTGTATGGGAACTATGATGGGCTAAATGAACTGCCTAAGTTTGATCTGCACTTGGGACCTAGTTTCTGGGATTCGATCACACTAGCCGATGCGGCTGCGAGTACCATCAAAGAAGTCATTCATACTCCCTCAGTAGACTACATTCATGTATGTCTTGTAAACACTGGCTCCGGAATACCATTCATTTCAGCATTGGAACTGAGGCCTTTGAAAAACAACACTTATACAACCAAAAGTGGTTCACTGGCACTCGAGTATCGCTTGGATGTTGGTTCTAAAACCAATCGATCATACAGGTATAACTATGACGTTTTTGATCGACTCTGGTTGCCTTTCGACTTCAGTTTGTGGGGAGAGTTAAGTACCACAGTAGATTCCATAGTTCAAAATAGCTACCAAATGCCATCTATAGTAATGAGTACTGCAGGAACTCCATTGAACGCTAGTAACCCCATGTATATCGGCTGGAACACGCCAGATACATCTTCTGAGTACTACGTTTACATGCACTTTACTGAAATCCAGAAGCTGAAAGCCAACGAGACCAGATCATTCAATATCACTCTGAACGACAAGCCTTTTTATGGACCTCTTGTGCCAGATAACTTGAGTACGATCACTGTTTACAGCCCGGCAGCCTTAACAGGAGGGAATTTTACATTCTCACTCTTCAAAACTGAAAGTTCAACACTGCCACCAATCCTCAATGCCATGGAGTACTACAGAGTCATAGATTTCTCACAGTCAGAAACTAATGGAGACGATGTGGTTGCAATCACAAACATAAAGTCAGCATATGGAATTGAGAAAAATTGGCAGGGAGATCCATGTGCTCCAAAAGATTACATCTGGGAAGGTCTAAACTGTAGCTCGGACGATCCCCCAAGAATCACATCGTTGGACTTGTCCTCGAGTGGATTGACAGGAGAGATACCTTCATATATATCCAATCTTGACATGTTACAATCTTTGGATATATCTAACAACAGCTTCACTGGATCAGTACCCGAATTTCTGACTAAATTGCCAAAACTGAAATTCCTTAACTTGGAAAAGAACAAGCTCAATGGTTCACTTCCAAGTATGCTTATAGAAAAATCCACAAGTGGATCCCTATCGTTAAGGGTCGGAGAAAATGAGAACTTATGTGCAGCAATTTCATGCAAAAAGAAGAAAAAGAATGTACTCATTCCAATAATAGCAGCAGTTGGTGGATTTGCTATTCTGTTTGTAGCATCAATTGCTATATTTTTAAGCATGAAAAGAAAAAGGAAACAAGTTGGAACAGCAGTTACAGAATCAAACATTCAAATAGATTCATTCGAAAATTTTGAGTCCAAAAAGAGACAATTTACATACTCAGAGGTGCTGAAGATTACTAACAACTTTCAGAAAGTTCTTGGGAAAGGTGGATTTGGAATGGTTTACCATGGCTATGTAGATGATACTCAAGTAGCTGTGAAAGTACTTTCTCCCTCATCAGTTCAAGGATACCAACAATTTCAAGCAGAGGTCAAACTACTTATGAGAGTTCATCACAGAAACTTGACTGGCCTTGTTGGATATTGCAATGAAGGACCGAACATGGCTCTCCTCTACGAATATATGGCCAATGGAGATTTGGAATCACATATCTTGGGTGAAGATAGCAATGCAATCTTGAGTTGGGAAAGTAGACTTAGAATAGCGGCTGATGCAGCACAAGGACTGGAGTATCTTCACAATGGTTGTAAGCCACCTATTATCCACAGAGATGTGAAGACAACAAATATTTTGTTAGCTGAAAACTTCCAAGCAAAGTTGGCTGATTTTGGCCTATCCAGAATGTTCCCAACTGATGAAGGCACTCATATGTCAACAGCTGTTGCTGGCACCCCTGGATACCTTGATCCTGAGTACCACATAACAGGCTGGTTGAATGAGAAGAGTGATGTATATAGCTTTGGAGTTGCTCTCCTGCAGATAATAACTAGCCGACCTGTGATATCAAGAACATCCCAAGTGAACAGTCATGTAAGTCAATGGGTTAGCTCCATGCTTTCTACTGGAGATATCAAAAGTATTGTTGATCCTAAGTTACGAGGAGATTTCGAAATCAACTCTGCGTGGAAGGCTGTTGAGTTGGCAAGGGATTGTATGTCTGATATGTCAACTGCAAGGCCAAACATGAGTGAGGTGGTGACAAGACTCAAAGAGTGCTTCGGAGCAGAGTTGGCTCGACTAAATGAAAGTCGTGCGAGTGGAACAACTGATTCATCAATTGTGTTCTCCATGAATTCTGGATTTAGTCCTTCGGCGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

876

Amino Acids

96.76

Weight (kDa)

5.68

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 351 3.2e-116 Malectin-like domain
LRR_8 PF13855 403 - 463 2.7e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 571 - 838 5.7e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 572 - 835 5.6e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2195
AccI GTMKAC 2 cut(s) 459, 1999
AccIII TCCGGA 1 cut(s) 494
AciI CCGC 3 cut(s) 65, 416, 2012
AclWI GGATC 7 cut(s) 1142, 1196, 1330, 1428, 1441, 2207, 2387
AcoI YGGCCR 1 cut(s) 1932
AcsI RAATTY 5 cut(s) 976, 1334, 1361, 1651, 2599
AcuI CTGAAG 2 cut(s) 649, 1715
AfiI CCNNNNNNNGG 3 cut(s) 140, 908, 1372
AflIII ACRYGT 1 cut(s) 1281
AjnI CCWGG 1 cut(s) 2200
Alw21I GWGCWC 1 cut(s) 1159
Alw26I GTCTC 3 cut(s) 860, 1077, 1663
AlwI GGATC 7 cut(s) 1142, 1196, 1330, 1428, 1441, 2207, 2387
AlwNI CAGNNNCTG 2 cut(s) 270, 853
Ama87I CYCGRG 2 cut(s) 575, 1234
Aor13HI TCCGGA 1 cut(s) 494
AoxI GGCC 5 cut(s) 527, 1876, 1932, 2137, 2483
ApeKI GCWGC 7 cut(s) 226, 233, 419, 959, 1475, 1526, 2021
ApoI RAATTY 5 cut(s) 976, 1334, 1361, 1651, 2599
ArsI GACNNNNNNTTYG 2 cut(s) 1097, 1129
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 4 cut(s) 261, 380, 911, 1901
AsuC2I CCSGG 2 cut(s) 37, 956
AsuHPI GGTGA 2 cut(s) 1976, 2515
AsuII TTCGAA 3 cut(s) 244, 1647, 2415
AvaI CYCGRG 2 cut(s) 575, 1234
AvaII GGWCC 4 cut(s) 261, 380, 911, 1901
BaeI ACNNNNGTAYC 6 cut(s) 563, 596, 1761, 1794, 2021, 2054
BalI TGGCCA 1 cut(s) 1934
BamHI GGATCC 1 cut(s) 1433
BanI GGYRCC 1 cut(s) 2195
BbsI GAAGAC 1 cut(s) 2090
Bbv12I GWGCWC 1 cut(s) 1159
BbvI GCAGC 7 cut(s) 238, 245, 406, 971, 1487, 1538, 2033
BccI CCATC 3 cut(s) 335, 437, 736
BcgI CGANNNNNNTGC 4 cut(s) 401, 435, 1076, 1110
BciT130I CCWGG 1 cut(s) 2202
BciVI GTATCC 2 cut(s) 1808, 2198
BclI TGATCA 1 cut(s) 73
BcnI CCSGG 2 cut(s) 37, 956
BcoDI GTCTC 3 cut(s) 860, 1077, 1663
BfaI CTAG 4 cut(s) 384, 407, 768, 2295
BfmI CTRYAG 5 cut(s) 732, 747, 1045, 1189, 2282
BfuI GTATCC 2 cut(s) 1808, 2198
BglI GCCNNNNNGGC 1 cut(s) 416
BmcAI AGTACT 4 cut(s) 745, 818, 1043, 1791
Bme1390I CCNGG 3 cut(s) 37, 956, 2202
Bme18I GGWCC 4 cut(s) 261, 380, 911, 1901
BmeT110I CYCGRG 2 cut(s) 575, 1234
BmgT120I GGNCC 4 cut(s) 261, 380, 911, 1901
BmiI GGNNCC 4 cut(s) 381, 493, 1435, 2197
BmrFI CCNGG 3 cut(s) 37, 956, 2202
BmsI GCATC 3 cut(s) 403, 1568, 2008
BpiI GAAGAC 1 cut(s) 2090
BplI GAGNNNNNCTC 2 cut(s) 2262, 2294
BpmI CTGGAG 2 cut(s) 2054, 2391
Bpu14I TTCGAA 3 cut(s) 244, 1647, 2415
BpuEI CTTGAG 3 cut(s) 952, 1758, 2005
BpuMI CCSGG 2 cut(s) 37, 956
Bsa29I ATCGAT 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 1438
BsaI GGTCTC 1 cut(s) 860
BsaJI CCNNGG 3 cut(s) 1035, 1753, 2200
BsaWI WCCGGW 2 cut(s) 179, 494
BsaXI ACNNNNNCTCC 4 cut(s) 476, 506, 1074, 1104
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 908, 1372
Bse1I ACTGG 6 cut(s) 493, 573, 1324, 1879, 2037, 2374
Bse3DI GCAATG 4 cut(s) 26, 195, 1900, 1981
Bse8I GATNNNNATC 1 cut(s) 1438
BseAI TCCGGA 1 cut(s) 494
BseBI CCWGG 1 cut(s) 2202
BseCI ATCGAT 1 cut(s) 610
BseDI CCNNGG 3 cut(s) 1035, 1753, 2200
BseGI GGATG 2 cut(s) 595, 2318
BseJI GATNNNNATC 1 cut(s) 1438
BseLI CCNNNNNNNGG 3 cut(s) 140, 908, 1372
BseMI GCAATG 4 cut(s) 26, 195, 1900, 1981
BseMII CTCAG 6 cut(s) 120, 468, 515, 804, 1698, 2208
BseNI ACTGG 6 cut(s) 493, 573, 1324, 1879, 2037, 2374
BseRI GAGGAG 2 cut(s) 1907, 2421
BseXI GCAGC 7 cut(s) 238, 245, 406, 971, 1487, 1538, 2033
BsgI GTGCAG 2 cut(s) 356, 1494
BshFI GGCC 5 cut(s) 529, 1878, 1934, 2139, 2485
BshNI GGYRCC 1 cut(s) 2195
BshVI ATCGAT 1 cut(s) 610
BsiHKAI GWGCWC 1 cut(s) 1159
BsiHKCI CYCGRG 2 cut(s) 575, 1234
BsiSI CCGG 5 cut(s) 36, 180, 203, 495, 956
BslFI GGGAC 1 cut(s) 393
BslI CCNNNNNNNGG 3 cut(s) 140, 908, 1372
BsmAI GTCTC 3 cut(s) 860, 1077, 1663
BsmBI CGTCTC 1 cut(s) 1077
BsmFI GGGAC 1 cut(s) 393
BsmI GAATGC 1 cut(s) 144
BsnI GGCC 5 cut(s) 529, 1878, 1934, 2139, 2485
Bso31I GGTCTC 1 cut(s) 860
BsoBI CYCGRG 2 cut(s) 575, 1234
Bsp119I TTCGAA 3 cut(s) 244, 1647, 2415
Bsp1286I GDGCHC 1 cut(s) 1159
Bsp13I TCCGGA 1 cut(s) 494
Bsp19I CCATGG 2 cut(s) 1035, 1753
BspACI CCGC 3 cut(s) 65, 416, 2012
BspANI GGCC 5 cut(s) 529, 1878, 1934, 2139, 2485
BspCNI CTCAG 6 cut(s) 121, 467, 516, 805, 1697, 2209
BspDI ATCGAT 1 cut(s) 610
BspEI TCCGGA 1 cut(s) 494
BspLI GGNNCC 4 cut(s) 381, 493, 1435, 2197
BspMAI CTGCAG 2 cut(s) 751, 2286
BspPI GGATC 7 cut(s) 1142, 1196, 1330, 1428, 1441, 2207, 2387
BspT104I TTCGAA 3 cut(s) 244, 1647, 2415
BspT107I GGYRCC 1 cut(s) 2195
BspTNI GGTCTC 1 cut(s) 860
BsrDI GCAATG 4 cut(s) 26, 195, 1900, 1981
BsrI ACTGG 6 cut(s) 493, 573, 1324, 1879, 2037, 2374
BssECI CCNNGG 3 cut(s) 1035, 1753, 2200
BssT1I CCWWGG 2 cut(s) 1035, 1753
Bst2UI CCWGG 1 cut(s) 2202
Bst4CI ACNGT 7 cut(s) 101, 272, 694, 946, 1068, 1190, 2333
Bst6I CTCTTC 2 cut(s) 998, 2243
BstAPI GCANNNNNTGC 1 cut(s) 1565
BstBI TTCGAA 3 cut(s) 244, 1647, 2415
BstC8I GCNNGC 2 cut(s) 231, 2194
BstDEI CTNAG 9 cut(s) 129, 360, 454, 524, 813, 1684, 2003, 2217, 2397
BstDSI CCRYGG 2 cut(s) 1035, 1753
BstF5I GGATG 2 cut(s) 595, 2318
BstHHI GCGC 1 cut(s) 202
BstMAI GTCTC 3 cut(s) 860, 1077, 1663
BstMWI GCNNNNNNNGC 8 cut(s) 90, 416, 1565, 2018, 2021, 2126, 2435, 2537
BstNI CCWGG 1 cut(s) 2202
BstNSI RCATGY 2 cut(s) 832, 1285
BstSCI CCNGG 3 cut(s) 35, 954, 2200
BstSFI CTRYAG 5 cut(s) 732, 747, 1045, 1189, 2282
BstV1I GCAGC 7 cut(s) 238, 245, 406, 971, 1487, 1538, 2033
BstV2I GAAGAC 1 cut(s) 2090
BstX2I RGATCY 2 cut(s) 1147, 1433
BstYI RGATCY 2 cut(s) 1147, 1433
Bsu15I ATCGAT 1 cut(s) 610
BsuI GTATCC 2 cut(s) 1808, 2198
BsuRI GGCC 5 cut(s) 529, 1878, 1934, 2139, 2485
BsuTUI ATCGAT 1 cut(s) 610
BtgI CCRYGG 2 cut(s) 1035, 1753
BtsCI GGATG 2 cut(s) 595, 2318
BtsI GCAGTG 1 cut(s) 1013
BtsIMutI CAGTG 5 cut(s) 486, 566, 942, 1013, 1317
Cac8I GCNNGC 2 cut(s) 231, 2194
CaiI CAGNNNCTG 2 cut(s) 270, 853
CfoI GCGC 1 cut(s) 202
Cfr13I GGNCC 4 cut(s) 261, 380, 911, 1901
ClaI ATCGAT 1 cut(s) 610
DdeI CTNAG 9 cut(s) 129, 360, 454, 524, 813, 1684, 2003, 2217, 2397
EaeI YGGCCR 1 cut(s) 1932
Eam1104I CTCTTC 2 cut(s) 998, 2243
EarI CTCTTC 2 cut(s) 998, 2243
Eco130I CCWWGG 2 cut(s) 1035, 1753
Eco147I AGGCCT 1 cut(s) 529
Eco31I GGTCTC 1 cut(s) 860
Eco32I GATATC 2 cut(s) 2310, 2377
Eco47I GGWCC 4 cut(s) 261, 380, 911, 1901
Eco57I CTGAAG 2 cut(s) 649, 1715
Eco88I CYCGRG 2 cut(s) 575, 1234
EcoO109I RGGNCCY 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 2599
EcoRII CCWGG 1 cut(s) 2200
EcoRV GATATC 2 cut(s) 2310, 2377
EcoT14I CCWWGG 2 cut(s) 1035, 1753
ErhI CCWWGG 2 cut(s) 1035, 1753
Esp3I CGTCTC 1 cut(s) 1077
FaqI GGGAC 1 cut(s) 393
FauNDI CATATG 2 cut(s) 1120, 2175
FbaI TGATCA 1 cut(s) 73
FblI GTMKAC 2 cut(s) 459, 1999
FokI GGATG 2 cut(s) 602, 2305
FspBI CTAG 4 cut(s) 384, 407, 768, 2295
GlaI GCGC 1 cut(s) 201
GsuI CTGGAG 2 cut(s) 2054, 2391
HaeIII GGCC 5 cut(s) 529, 1878, 1934, 2139, 2485
HapII CCGG 5 cut(s) 36, 180, 203, 495, 956
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 2 cut(s) 2181, 2475
HindII GTYRAC 2 cut(s) 2181, 2475
HindIII AAGCTT 1 cut(s) 247
HpaII CCGG 5 cut(s) 36, 180, 203, 495, 956
HphI GGTGA 2 cut(s) 1976, 2515
Hpy188III TCNNGA 8 cut(s) 495, 847, 1277, 1984, 2145, 2216, 2313, 2604
HpyAV CCTTC 6 cut(s) 1172, 1269, 1892, 2159, 2428, 2625
HpyCH4III ACNGT 7 cut(s) 101, 272, 694, 946, 1068, 1190, 2333
HpyCH4IV ACGT 2 cut(s) 633, 822
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 416, 1565, 2018, 2021, 2126, 2435, 2537
HpyF3I CTNAG 9 cut(s) 129, 360, 454, 524, 813, 1684, 2003, 2217, 2397
HpySE526I ACGT 2 cut(s) 633, 822
HspAI GCGC 1 cut(s) 200
Kpn2I TCCGGA 1 cut(s) 494
Ksp22I TGATCA 1 cut(s) 73
LmnI GCTCC 4 cut(s) 497, 1162, 2360, 2528
Lsp1109I GCAGC 7 cut(s) 238, 245, 406, 971, 1487, 1538, 2033
LweI GCATC 3 cut(s) 403, 1568, 2008
MaeI CTAG 4 cut(s) 384, 407, 768, 2295
MaeII ACGT 2 cut(s) 633, 822
MaeIII GTNAC 6 cut(s) 272, 770, 1284, 1615, 2400, 2503
MboII GAAGA 8 cut(s) 801, 985, 1507, 1708, 1979, 2033, 2095, 2260
MfeI CAATTG 2 cut(s) 1563, 2583
MflI RGATCY 2 cut(s) 1147, 1433
MhlI GDGCHC 1 cut(s) 1159
MlsI TGGCCA 1 cut(s) 1934
MluNI TGGCCA 1 cut(s) 1934
MlyI GAGTC 4 cut(s) 639, 1059, 1667, 2505
MmeI TCCRAC 4 cut(s) 1203, 1432, 1585, 1864
Mox20I TGGCCA 1 cut(s) 1934
MroI TCCGGA 1 cut(s) 494
MroXI GAANNNNTTC 1 cut(s) 441
MscI TGGCCA 1 cut(s) 1934
MseI TTAA 7 cut(s) 119, 308, 683, 965, 1368, 1445, 1577
MslI CAYNNNNRTG 3 cut(s) 1758, 2076, 2174
Msp20I TGGCCA 1 cut(s) 1934
MspA1I CMGCKG 1 cut(s) 2186
MspI CCGG 5 cut(s) 36, 180, 203, 495, 956
MspR9I CCNGG 3 cut(s) 37, 956, 2202
MunI CAATTG 2 cut(s) 1563, 2583
Mva1269I GAATGC 1 cut(s) 144
MvaI CCWGG 1 cut(s) 2202
MwoI GCNNNNNNNGC 8 cut(s) 90, 416, 1565, 2018, 2021, 2126, 2435, 2537
NciI CCSGG 2 cut(s) 37, 956
NcoI CCATGG 2 cut(s) 1035, 1753
NdeI CATATG 2 cut(s) 1120, 2175
NlaIV GGNNCC 4 cut(s) 381, 493, 1435, 2197
NmuCI GTSAC 1 cut(s) 2503
NspI RCATGY 2 cut(s) 832, 1285
NspV TTCGAA 3 cut(s) 244, 1647, 2415
PaeR7I CTCGAG 2 cut(s) 575, 1234
PceI AGGCCT 1 cut(s) 529
PciI ACATGT 1 cut(s) 1281
PctI GAATGC 1 cut(s) 144
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 7 cut(s) 395, 698, 1212, 1622, 1640, 1949, 2576
PleI GAGTC 4 cut(s) 639, 1058, 1666, 2505
PpsI GAGTC 4 cut(s) 639, 1058, 1666, 2505
PpuMI RGGWCCY 1 cut(s) 380
PscI ACATGT 1 cut(s) 1281
Psp5II RGGWCCY 1 cut(s) 380
Psp6I CCWGG 1 cut(s) 2200
PspGI CCWGG 1 cut(s) 2200
PspN4I GGNNCC 4 cut(s) 381, 493, 1435, 2197
PspPI GGNCC 4 cut(s) 261, 380, 911, 1901
PspPPI RGGWCCY 1 cut(s) 380
PspXI VCTCGAGB 2 cut(s) 575, 1234
PsrI GAACNNNNNNTAC 2 cut(s) 1600, 1632
PstI CTGCAG 2 cut(s) 751, 2286
PstNI CAGNNNCTG 2 cut(s) 270, 853
PsuI RGATCY 2 cut(s) 1147, 1433
PvuII CAGCTG 1 cut(s) 2186
RseI CAYNNNNRTG 3 cut(s) 1758, 2076, 2174
SaqAI TTAA 7 cut(s) 119, 308, 683, 965, 1368, 1445, 1577
Sau96I GGNCC 4 cut(s) 261, 380, 911, 1901
ScaI AGTACT 4 cut(s) 745, 818, 1043, 1791
SchI GAGTC 4 cut(s) 639, 1059, 1667, 2505
ScrFI CCNGG 3 cut(s) 37, 956, 2202
SduI GDGCHC 1 cut(s) 1159
SfaNI GCATC 3 cut(s) 403, 1568, 2008
SfcI CTRYAG 5 cut(s) 732, 747, 1045, 1189, 2282
Sfr274I CTCGAG 2 cut(s) 575, 1234
SfuI TTCGAA 3 cut(s) 244, 1647, 2415
SinI GGWCC 4 cut(s) 261, 380, 911, 1901
SlaI CTCGAG 2 cut(s) 575, 1234
SmiMI CAYNNNNRTG 3 cut(s) 1758, 2076, 2174
SmlI CTYRAG 5 cut(s) 575, 931, 1234, 1773, 1984
SmoI CTYRAG 5 cut(s) 575, 931, 1234, 1773, 1984
SseBI AGGCCT 1 cut(s) 529
SsiI CCGC 3 cut(s) 65, 416, 2012
SspI AATATT 2 cut(s) 305, 2095
SspMI CTAG 4 cut(s) 384, 407, 768, 2295
StuI AGGCCT 1 cut(s) 529
StyD4I CCNGG 3 cut(s) 35, 954, 2200
StyI CCWWGG 2 cut(s) 1035, 1753
TaaI ACNGT 7 cut(s) 101, 272, 694, 946, 1068, 1190, 2333
TaiI ACGT 2 cut(s) 636, 825
TaqII GACCGA 1 cut(s) 1918
TatI WGTACW 6 cut(s) 150, 743, 816, 1041, 1507, 1789
TauI GCSGC 3 cut(s) 68, 419, 2015
TfiI GAWTC 7 cut(s) 395, 698, 1212, 1622, 1640, 1949, 2576
Tru1I TTAA 7 cut(s) 119, 308, 683, 965, 1368, 1445, 1577
Tru9I TTAA 7 cut(s) 119, 308, 683, 965, 1368, 1445, 1577
TscAI CASTG 5 cut(s) 493, 573, 949, 1020, 1324
TseFI GTSAC 1 cut(s) 2503
TseI GCWGC 7 cut(s) 226, 233, 419, 959, 1475, 1526, 2021
Tsp45I GTSAC 1 cut(s) 2503
TspRI CASTG 5 cut(s) 493, 573, 949, 1020, 1324
VpaK11BI GGWCC 4 cut(s) 261, 380, 911, 1901
XapI RAATTY 5 cut(s) 976, 1334, 1361, 1651, 2599
XceI RCATGY 2 cut(s) 832, 1285
XcmI CCANNNNNNNNNTGG 1 cut(s) 1942
XhoI CTCGAG 2 cut(s) 575, 1234
XmiI GTMKAC 2 cut(s) 459, 1999
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 4 cut(s) 384, 407, 768, 2295
ZrmI AGTACT 4 cut(s) 745, 818, 1043, 1791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.